Citrus Sinensis ID: 022316
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 299 | 2.2.26 [Sep-21-2011] | |||||||
| O23969 | 352 | Pollen-specific protein S | N/A | no | 0.919 | 0.781 | 0.644 | 1e-103 | |
| A5A6K6 | 357 | Protein NDRG2 OS=Pan trog | yes | no | 0.852 | 0.714 | 0.302 | 2e-28 | |
| Q3SYX0 | 384 | Protein NDRG1 OS=Bos taur | yes | no | 0.816 | 0.635 | 0.304 | 3e-28 | |
| Q5RBN6 | 371 | Protein NDRG2 OS=Pongo ab | yes | no | 0.816 | 0.657 | 0.303 | 5e-28 | |
| Q9UN36 | 371 | Protein NDRG2 OS=Homo sap | yes | no | 0.816 | 0.657 | 0.303 | 5e-28 | |
| Q641F2 | 396 | Protein NDRG1-A OS=Xenopu | N/A | no | 0.812 | 0.613 | 0.314 | 6e-28 | |
| Q3ZBA8 | 357 | Protein NDRG2 OS=Bos taur | no | no | 0.852 | 0.714 | 0.291 | 1e-27 | |
| Q4R4K0 | 357 | Protein NDRG2 OS=Macaca f | N/A | no | 0.822 | 0.689 | 0.312 | 1e-27 | |
| Q8VBU2 | 371 | Protein NDRG2 OS=Rattus n | yes | no | 0.816 | 0.657 | 0.299 | 1e-27 | |
| Q9QYG0 | 371 | Protein NDRG2 OS=Mus musc | yes | no | 0.816 | 0.657 | 0.291 | 3e-27 |
| >sp|O23969|SF21_HELAN Pollen-specific protein SF21 OS=Helianthus annuus GN=SF21 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/276 (64%), Positives = 221/276 (80%), Gaps = 1/276 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADS S+S+ + GK+++I+T GS+SVT+ GDQ+KP L+TYPDLALN+MSCFQ
Sbjct: 1 MADSG-HSISVTFPSFHSGGKEHIIRTGCGSVSVTVCGDQEKPPLITYPDLALNHMSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLF PE+ SLLLHNFCIYHINPPGHE GAA+I D+PV S++DL DQI VLN+F LG+
Sbjct: 60 GLFVSPESASLLLHNFCIYHINPPGHELGAASIGIDDPVPSIEDLCDQILVVLNYFRLGS 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMG AGAYILTLF++KY RV GLIL+SP+CKAPSWTE YNK+ S LYYYGMC +
Sbjct: 120 VMCMGAMAGAYILTLFSIKYSERVTGLILISPICKAPSWTERFYNKLTSKTLYYYGMCDL 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKELL+ RYFSKEV GN ++PESD+V ACR+LLDER S NVW +L+AI+ R DI+E L+
Sbjct: 180 VKELLIHRYFSKEVCGNPEIPESDMVLACRKLLDERDSVNVWRYLQAIDSRRDITEELKS 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
L+C+++IFVG+SSPFH EA+ + K+ SALVEV
Sbjct: 240 LECKTIIFVGDSSPFHDEALQIAEKLGTNCSALVEV 275
|
Helianthus annuus (taxid: 4232) |
| >sp|A5A6K6|NDRG2_PANTR Protein NDRG2 OS=Pan troglodytes GN=NDRG2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 26/281 (9%)
Query: 9 VSIDMETP------PPSGKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQ 60
V I E P P + K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ
Sbjct: 7 VQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQ 66
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
LF E ++ NF H++ PG E GA S+D LAD I VL +
Sbjct: 67 PLFQF-EDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFST 125
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
++ +GV AGAYIL +A+ + V GL+L++ A W +W +K+ G+
Sbjct: 126 IIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKRWMDWAAHKLT-------GLTSS 178
Query: 181 VKELLLKRYFSK-EVRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS--- 235
+ E++L FS+ E+ GN S+++Q R ++ + N+ + + N R D++
Sbjct: 179 IPEMILGHLFSQEELSGN-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFER 233
Query: 236 EGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
G L+C ++ VG+ +P V SK+D ++ +++
Sbjct: 234 GGDITLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKM 274
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. Pan troglodytes (taxid: 9598) |
| >sp|Q3SYX0|NDRG1_BOVIN Protein NDRG1 OS=Bos taurus GN=NDRG1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 137/266 (51%), Gaps = 22/266 (8%)
Query: 21 KDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
++ I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F +
Sbjct: 33 QEQDIETLHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAV 91
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+
Sbjct: 92 CHVDAPGQQDGAASFPTGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFAL 151
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA 198
V GL+L++ A W +W +K+ G + ++++ F KE N
Sbjct: 152 NNPEMVEGLVLINVNPCAEGWMDWAASKI-------SGWTQALPDMVVSHLFGKEEMQN- 203
Query: 199 QVPESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFVG 250
++V A R ++++ N+ F+ A NGR D+ LQC +L+ VG
Sbjct: 204 ---NVEVVHAYRHHVMNDMNPGNLQLFINAYNGRRDLEIERPMPGAHTVTLQCPALLVVG 260
Query: 251 ESSPFHSEAVHMTSKIDRRYSALVEV 276
+SSP V SK+D + L+++
Sbjct: 261 DSSPAVDAVVECNSKLDPTKTTLLKM 286
|
Stress-responsive protein involved in hormone responses, cell growth, and differentiation. Acts as a tumor suppressor in many cell types. Necessary but not sufficient for p53/TP53-mediated caspase activation and apoptosis. Has a role in cell trafficking notably of the Schwann cell and is necessary for the maintenance and development of the peripheral nerve myelin sheath. Required for vesicular recycling of CDH1 and TF. May also function in lipid trafficking. Protects cells from spindle disruption damage. Functions in p53/TP53-dependent mitotic spindle checkpoint. Regulates microtubule dynamics and maintains euploidy. Bos taurus (taxid: 9913) |
| >sp|Q5RBN6|NDRG2_PONAB Protein NDRG2 OS=Pongo abelii GN=NDRG2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 138/264 (52%), Gaps = 20/264 (7%)
Query: 20 GKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC 77
G+ + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++ NF
Sbjct: 38 GQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQNFV 96
Query: 78 IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFA 137
H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL +A
Sbjct: 97 RVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYA 156
Query: 138 MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRG 196
+ + V GL+L++ A W +W +K+ G+ + E++L FS+ E+ G
Sbjct: 157 LNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEELSG 209
Query: 197 NAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFVGES 252
N S+++Q R ++ + N+ + + N R D++ G L+C ++ VG+
Sbjct: 210 N-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLKCPVMLVVGDQ 264
Query: 253 SPFHSEAVHMTSKIDRRYSALVEV 276
+P V SK+D ++ +++
Sbjct: 265 APHEDAVVECNSKLDPTQTSFLKM 288
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. Pongo abelii (taxid: 9601) |
| >sp|Q9UN36|NDRG2_HUMAN Protein NDRG2 OS=Homo sapiens GN=NDRG2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 138/264 (52%), Gaps = 20/264 (7%)
Query: 20 GKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC 77
G+ + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++ NF
Sbjct: 38 GQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQNFV 96
Query: 78 IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFA 137
H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL +A
Sbjct: 97 RVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYA 156
Query: 138 MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRG 196
+ + V GL+L++ A W +W +K+ G+ + E++L FS+ E+ G
Sbjct: 157 LNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEELSG 209
Query: 197 NAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFVGES 252
N S+++Q R ++ + N+ + + N R D++ G L+C ++ VG+
Sbjct: 210 N-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQ 264
Query: 253 SPFHSEAVHMTSKIDRRYSALVEV 276
+P V SK+D ++ +++
Sbjct: 265 APHEDAVVECNSKLDPTQTSFLKM 288
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. Homo sapiens (taxid: 9606) |
| >sp|Q641F2|NDR1A_XENLA Protein NDRG1-A OS=Xenopus laevis GN=ndrg1-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 142/267 (53%), Gaps = 24/267 (8%)
Query: 21 KDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
+++ I+T+HG + VT+ G ++P ++TY D+ LN+ +CF LF + + H F +
Sbjct: 34 QEHDIETAHGIVHVTMCGTPKLNRPVILTYHDIGLNHKTCFNSLFNFEDMHEISQH-FSV 92
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GAA+ S+D LA+ + V+ GL VM +G+ AGAYILT FA+
Sbjct: 93 CHVDAPGQQEGAASFPAGYMYPSMDQLAEMLPGVVQQLGLRTVMGLGIGAGAYILTRFAL 152
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGN 197
+ V GL+L++ A W +W K+ G + ++++ FSK EV N
Sbjct: 153 NHPSMVEGLVLININPCAEGWMDWAATKI-------SGWTNALPDMVISHLFSKDEVHSN 205
Query: 198 AQVPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFV 249
PE +V+ R+ +L + +NV HF+++ N R D+ L+C +L+ V
Sbjct: 206 ---PE--LVETYRQHILHDINQNNVQHFVKSYNSRRDLEIERPIPGTNAVTLKCPALLVV 260
Query: 250 GESSPFHSEAVHMTSKIDRRYSALVEV 276
G+SSP V SK+D + L+++
Sbjct: 261 GDSSPAVDAVVECNSKLDPTKTTLLKM 287
|
May be involved in pronephros development, after specification of the pronephros. Xenopus laevis (taxid: 8355) |
| >sp|Q3ZBA8|NDRG2_BOVIN Protein NDRG2 OS=Bos taurus GN=NDRG2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 143/281 (50%), Gaps = 26/281 (9%)
Query: 9 VSIDMETP------PPSGKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQ 60
V I E P P K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ
Sbjct: 7 VQITEEKPLLPGQTPEVAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQ 66
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
LF + ++ NF H++ PG E GA S+D LAD I +L +
Sbjct: 67 PLFQFADMQEII-QNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFST 125
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
++ +GV AGAY+L+ +A+ + V GL+L++ A W +W +K+ G+
Sbjct: 126 IIGIGVGAGAYVLSRYALTHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSS 178
Query: 181 VKELLLKRYFSK-EVRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS--- 235
+ E++L FS+ E+ GN S+++Q R ++ + N+ + + N R D++
Sbjct: 179 ISEMILGHLFSQEELSGN-----SELIQKYRNIIAHAPNLDNIELYWNSYNNRRDLNFVR 233
Query: 236 EGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
G L+C ++ VG+ +P V SK+D ++ +++
Sbjct: 234 GGDTTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKM 274
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. Bos taurus (taxid: 9913) |
| >sp|Q4R4K0|NDRG2_MACFA Protein NDRG2 OS=Macaca fascicularis GN=NDRG2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 139/272 (51%), Gaps = 26/272 (9%)
Query: 9 VSIDMETP------PPSGKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQ 60
V I E P P + K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ
Sbjct: 7 VQITEEKPLLPGQTPEAAKIHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQ 66
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
LF + ++ NF H++ PG E GA S+D LAD I VL +
Sbjct: 67 PLFQFGDMQEII-QNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFST 125
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
V+ +GV AGAYIL+ +A+ + V GL+L++ A W +W +K+ G+
Sbjct: 126 VIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSS 178
Query: 181 VKELLLKRYFSK-EVRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS--- 235
+ E++L FS+ E+ GN S+++Q R ++ + N+ + + N R D++
Sbjct: 179 IPEMILGHLFSQEELSGN-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFER 233
Query: 236 EGLRKLQCRSLIFVGESSPFHSEAVHMTSKID 267
G L+C ++ VG+ +P V SK+D
Sbjct: 234 GGDITLKCPVMLVVGDQAPHEDAVVECNSKLD 265
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. Macaca fascicularis (taxid: 9541) |
| >sp|Q8VBU2|NDRG2_RAT Protein NDRG2 OS=Rattus norvegicus GN=Ndrg2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 137/264 (51%), Gaps = 20/264 (7%)
Query: 20 GKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC 77
G+ + ++T +GS++ T+YG +PA+ TY D+ LNY SCFQ LF + ++ NF
Sbjct: 38 GQTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFQFGDMQEII-QNFV 96
Query: 78 IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFA 137
H++ PG E GA S D LAD I +L + ++ +GV AGAYIL+ +A
Sbjct: 97 RVHVDAPGMEEGAPVFPLGYQYPSQDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYA 156
Query: 138 MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRG 196
+ + V GL+L++ A W +W +K+ G+ + E++L FS+ E+ G
Sbjct: 157 LNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEELSG 209
Query: 197 NAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFVGES 252
N S+++Q R L+ + N+ + + N R D++ G L+C ++ VG+
Sbjct: 210 N-----SELIQKYRSLITHAPNLENIELYWNSYNNRRDLNFERGGEMTLKCPVMLVVGDQ 264
Query: 253 SPFHSEAVHMTSKIDRRYSALVEV 276
+P V SK+D ++ +++
Sbjct: 265 APHEDAVVECNSKLDPTQTSFLKM 288
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor (By similarity). May be involved in dendritic cell and neuron differentiation. Rattus norvegicus (taxid: 10116) |
| >sp|Q9QYG0|NDRG2_MOUSE Protein NDRG2 OS=Mus musculus GN=Ndrg2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 138/264 (52%), Gaps = 20/264 (7%)
Query: 20 GKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC 77
G+ + ++T +GS++ T+YG +PA+ TY D+ LNY SCFQ LF + ++ NF
Sbjct: 38 GQTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEII-QNFV 96
Query: 78 IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFA 137
H++ PG E GA S+D LAD I +L + ++ +GV AGAYIL+ +A
Sbjct: 97 RVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYA 156
Query: 138 MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRG 196
+ + V GL+L++ A W +W +K+ G+ + +++L FS+ E+ G
Sbjct: 157 LNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPDMILGHLFSQEELSG 209
Query: 197 NAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFVGES 252
N S+++Q R ++ + N+ + + N R D++ G L+C ++ VG+
Sbjct: 210 N-----SELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQ 264
Query: 253 SPFHSEAVHMTSKIDRRYSALVEV 276
+P V SK+D ++ +++
Sbjct: 265 APHEDAVVECNSKLDPTQTSFLKM 288
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. Mus musculus (taxid: 10090) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 299 | ||||||
| 225429470 | 344 | PREDICTED: pollen-specific protein SF21 | 0.926 | 0.805 | 0.848 | 1e-137 | |
| 255550824 | 347 | pollen specific protein sf21, putative [ | 0.919 | 0.792 | 0.844 | 1e-136 | |
| 224092204 | 347 | predicted protein [Populus trichocarpa] | 0.909 | 0.783 | 0.834 | 1e-132 | |
| 356564069 | 347 | PREDICTED: pollen-specific protein SF21- | 0.903 | 0.778 | 0.822 | 1e-131 | |
| 359807335 | 344 | uncharacterized protein LOC100804729 [Gl | 0.906 | 0.787 | 0.811 | 1e-130 | |
| 449450343 | 347 | PREDICTED: pollen-specific protein SF21- | 0.916 | 0.789 | 0.813 | 1e-130 | |
| 224141627 | 347 | predicted protein [Populus trichocarpa] | 0.919 | 0.792 | 0.818 | 1e-130 | |
| 357437503 | 349 | Pollen-specific protein SF21 [Medicago t | 0.923 | 0.790 | 0.797 | 1e-130 | |
| 449494415 | 347 | PREDICTED: pollen-specific protein SF21- | 0.916 | 0.789 | 0.810 | 1e-130 | |
| 356564067 | 349 | PREDICTED: pollen-specific protein SF21- | 0.866 | 0.742 | 0.841 | 1e-129 |
| >gi|225429470|ref|XP_002277611.1| PREDICTED: pollen-specific protein SF21 [Vitis vinifera] gi|296081622|emb|CBI20627.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/278 (84%), Positives = 259/278 (93%), Gaps = 1/278 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADSS DSVSIDMET GK++L+KTS GS+SV+++GD DKPALVTYPDLALN++SCFQ
Sbjct: 1 MADSS-DSVSIDMETISLGGKEHLVKTSKGSVSVSVFGDPDKPALVTYPDLALNHLSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLFFCPEA SLLLHNFCIYHI+PPGHE GA A+S DEP LS DDLADQIAEVLN FGLGA
Sbjct: 60 GLFFCPEAFSLLLHNFCIYHISPPGHELGADAVSLDEPALSADDLADQIAEVLNFFGLGA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFA+KYRH V+GLIL+SPLCKAPSWTEWLYNKVM N+LYYYGMCGV
Sbjct: 120 VMCMGVTAGAYILTLFAIKYRHHVVGLILISPLCKAPSWTEWLYNKVMLNVLYYYGMCGV 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKELLLKRYFSKEVRG+AQVPESDIVQACRRLLDERQSSNV FLEAINGRPDI+EGLRK
Sbjct: 180 VKELLLKRYFSKEVRGSAQVPESDIVQACRRLLDERQSSNVLKFLEAINGRPDITEGLRK 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVWT 278
LQCRSL+FVG++SPFHSEA+HMTSK+DRRYSALVEV +
Sbjct: 240 LQCRSLLFVGDNSPFHSEALHMTSKLDRRYSALVEVQS 277
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255550824|ref|XP_002516460.1| pollen specific protein sf21, putative [Ricinus communis] gi|223544280|gb|EEF45801.1| pollen specific protein sf21, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/276 (84%), Positives = 257/276 (93%), Gaps = 1/276 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADSS DSVSIDMET +GK+ L+KT HG +SV++YGDQDKPAL+TYPDLALN+MSCFQ
Sbjct: 1 MADSS-DSVSIDMETLSLAGKEFLVKTCHGCVSVSVYGDQDKPALITYPDLALNHMSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLFFCPEACSLLL+NFCIYHI+PPGHE GAA +S D+ VLSVDDLADQIA++LN+FGLGA
Sbjct: 60 GLFFCPEACSLLLYNFCIYHISPPGHELGAATVSPDDNVLSVDDLADQIADILNYFGLGA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMKYR RVLGLIL+SPLC+ PSWTEWL NKV+SNLLYYYG+CGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKYRQRVLGLILISPLCQEPSWTEWLCNKVISNLLYYYGICGV 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKE LLKRYFSKE RG+AQVPESDIVQACRRLLDERQS NVW FLEA+NGRPDISEGLRK
Sbjct: 180 VKEFLLKRYFSKEARGSAQVPESDIVQACRRLLDERQSLNVWRFLEALNGRPDISEGLRK 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
L CRSLIFVGE+SPFHSEA+HMTSK+DRRYSALVEV
Sbjct: 240 LHCRSLIFVGENSPFHSEALHMTSKLDRRYSALVEV 275
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224092204|ref|XP_002309507.1| predicted protein [Populus trichocarpa] gi|222855483|gb|EEE93030.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/272 (83%), Positives = 251/272 (92%)
Query: 5 SSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF 64
SSDSVSIDMETP SGK+ +++T G +SV++YGDQDKPALVTYPDLALN++SCFQGLFF
Sbjct: 4 SSDSVSIDMETPSLSGKEYVVETCCGYVSVSVYGDQDKPALVTYPDLALNHISCFQGLFF 63
Query: 65 CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124
CPEACSLLLHNFCIYHI+PPGHE GAA IS D+P+LSVDDLADQIA+VLN+FGL AVMCM
Sbjct: 64 CPEACSLLLHNFCIYHISPPGHELGAATISPDDPLLSVDDLADQIADVLNYFGLDAVMCM 123
Query: 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184
GVTAGAYILTLFAMKYR RVLGLIL+SPLC APSWTEWLYNKV+SNLLYYYGMCGVVKEL
Sbjct: 124 GVTAGAYILTLFAMKYRQRVLGLILISPLCNAPSWTEWLYNKVLSNLLYYYGMCGVVKEL 183
Query: 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244
LLKRYFSKE RG+AQVPESD+VQACRRLLDERQ NVW FLEA+NGR DIS+GLRKL+CR
Sbjct: 184 LLKRYFSKEARGSAQVPESDVVQACRRLLDERQGLNVWRFLEAMNGRQDISDGLRKLRCR 243
Query: 245 SLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
SLI+VGESSPFH EA+ M SK+DRR SALVEV
Sbjct: 244 SLIYVGESSPFHFEALDMNSKLDRRCSALVEV 275
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564069|ref|XP_003550279.1| PREDICTED: pollen-specific protein SF21-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/270 (82%), Positives = 247/270 (91%)
Query: 7 DSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCP 66
DS+S+D+++ PS ++++I+T HGS+SV +YGDQDKPAL+TYPDLALNY+SCFQGL FCP
Sbjct: 6 DSLSLDIDSFSPSPQEHIIRTRHGSVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFCP 65
Query: 67 EACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGV 126
EA LLLHNFCIYHI+PPGHE GAAAI D P+LSVDDLADQIAEVLN FGL AVMCMGV
Sbjct: 66 EAYYLLLHNFCIYHISPPGHELGAAAIDQDHPILSVDDLADQIAEVLNFFGLSAVMCMGV 125
Query: 127 TAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLL 186
TAGAYILTLFAMKYR RVLGLILVSPLCK PSWTEWLYNKVMSNLLY+YGMCGVVKE+LL
Sbjct: 126 TAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWTEWLYNKVMSNLLYFYGMCGVVKEILL 185
Query: 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246
KRYFSKE+RG Q+PESDIV++CRRLLDERQS NVW FLEAIN RPDISEGLRKL CRSL
Sbjct: 186 KRYFSKEIRGGTQLPESDIVKSCRRLLDERQSLNVWRFLEAINERPDISEGLRKLHCRSL 245
Query: 247 IFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
IFVG+ SPFHSEAVHMTSK+DRR+SALVEV
Sbjct: 246 IFVGDMSPFHSEAVHMTSKLDRRFSALVEV 275
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359807335|ref|NP_001240866.1| uncharacterized protein LOC100804729 [Glycine max] gi|255634903|gb|ACU17810.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/271 (81%), Positives = 246/271 (90%)
Query: 6 SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC 65
+DSVS+DME P ++++I+T HG +SV +YGDQDKPAL+TYPDLALNY+SCFQGL FC
Sbjct: 2 ADSVSVDMEAISPPPEEHIIRTRHGRVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFC 61
Query: 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMG 125
PEACSLLLHNFCIYHI+PPGHE GAAAI D+P+LS DDLADQIAEVLN+FG VMCMG
Sbjct: 62 PEACSLLLHNFCIYHISPPGHELGAAAIDPDDPILSADDLADQIAEVLNYFGHSTVMCMG 121
Query: 126 VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185
VTAGAYILTLFAMKYRHRVLGL+LVSPLCKAPSWTEWLYNKVMSNLLY+YGMCGVVKE+L
Sbjct: 122 VTAGAYILTLFAMKYRHRVLGLVLVSPLCKAPSWTEWLYNKVMSNLLYFYGMCGVVKEIL 181
Query: 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245
LKRYFSKEVRG+ + ESD+VQAC+R LDERQS NVW FLEAINGR DISEGLRKLQCRS
Sbjct: 182 LKRYFSKEVRGSDYLSESDVVQACQRSLDERQSLNVWRFLEAINGRYDISEGLRKLQCRS 241
Query: 246 LIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
LIFVG+ SPFH+EA+HMTSK+DRR SALVEV
Sbjct: 242 LIFVGDMSPFHAEALHMTSKLDRRLSALVEV 272
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449450343|ref|XP_004142922.1| PREDICTED: pollen-specific protein SF21-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/274 (81%), Positives = 247/274 (90%)
Query: 5 SSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF 64
SSDSVS+DME+ GK+ L+KT +G +SVT+ GD DKPAL+TYPDLALN+M CFQGL F
Sbjct: 4 SSDSVSVDMESISCGGKEYLVKTCYGVVSVTVVGDLDKPALITYPDLALNHMFCFQGLMF 63
Query: 65 CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124
CPEACSLLLHNFCIYHI+PPGHE GAAAI D+PVLS DDLADQIAEVLN+FGL AVMCM
Sbjct: 64 CPEACSLLLHNFCIYHISPPGHELGAAAICPDDPVLSADDLADQIAEVLNYFGLSAVMCM 123
Query: 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184
GVTAGAYILTLFAMK+RHRV GLIL+SP+C AP WTEWLYNKVMSNLLY+YGMCGVVKEL
Sbjct: 124 GVTAGAYILTLFAMKHRHRVHGLILISPICTAPCWTEWLYNKVMSNLLYFYGMCGVVKEL 183
Query: 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244
LLKRYFSK+ RG +QVPESD+VQACRR LDERQSSNVW FLEA+NGRPDISEGLRKL+CR
Sbjct: 184 LLKRYFSKDARGCSQVPESDLVQACRRSLDERQSSNVWRFLEAMNGRPDISEGLRKLKCR 243
Query: 245 SLIFVGESSPFHSEAVHMTSKIDRRYSALVEVWT 278
SLIFVG+ SPFHSEA HMT K+DRRYSALVEV +
Sbjct: 244 SLIFVGDRSPFHSEAHHMTVKLDRRYSALVEVQS 277
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141627|ref|XP_002324168.1| predicted protein [Populus trichocarpa] gi|222865602|gb|EEF02733.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/276 (81%), Positives = 249/276 (90%), Gaps = 1/276 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
M DSS DS+SIDMETP SGK+ +I+T +G +SV++YGDQDKPALVTYPDLALN+ SCFQ
Sbjct: 1 MGDSS-DSLSIDMETPSLSGKEYVIETCYGHVSVSVYGDQDKPALVTYPDLALNHTSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GL FCPEACSLLLHNFCIYHI+PPGHE GAA IS D+P+LSVDDLADQIAEVLN+FGL A
Sbjct: 60 GLLFCPEACSLLLHNFCIYHISPPGHELGAATISPDDPLLSVDDLADQIAEVLNYFGLDA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMKYR RVLGLIL+SPLC APSWTEWLYNKV+SNLLYYYGMCGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKYRQRVLGLILISPLCNAPSWTEWLYNKVLSNLLYYYGMCGV 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKELLLKRYFSKE G++QVPESD VQAC+RLLDERQ NVW FLEAINGR DIS GLRK
Sbjct: 180 VKELLLKRYFSKEALGSSQVPESDAVQACKRLLDERQGLNVWRFLEAINGRQDISNGLRK 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
L C SLIFVGE+SPFH E++ MTS++DRRYSALVEV
Sbjct: 240 LLCCSLIFVGENSPFHFESLDMTSELDRRYSALVEV 275
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357437503|ref|XP_003589027.1| Pollen-specific protein SF21 [Medicago truncatula] gi|355478075|gb|AES59278.1| Pollen-specific protein SF21 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/277 (79%), Positives = 249/277 (89%), Gaps = 1/277 (0%)
Query: 1 MADSS-SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCF 59
MADS+ +DSVS+D+++ PS K+++I+T HGS+SV +YGDQDKPAL+TYPDL LNY+SCF
Sbjct: 1 MADSTPTDSVSVDIDSISPSPKEHIIRTCHGSVSVAVYGDQDKPALITYPDLGLNYVSCF 60
Query: 60 QGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119
QGL FCPEA LLLHNFCIYHI+PPGHE GAAAI D PVLSVDDLADQIAEVLN FGL
Sbjct: 61 QGLLFCPEAYYLLLHNFCIYHISPPGHELGAAAIDPDYPVLSVDDLADQIAEVLNFFGLN 120
Query: 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179
AVMCMGVTAGAYILTLFAMKYR RVLGLILVSPLCK PSW+EWLYNKVMSNLLY+YGMCG
Sbjct: 121 AVMCMGVTAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWSEWLYNKVMSNLLYFYGMCG 180
Query: 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 239
VVKE+LLKRYFSKE+RG Q PESDIV+ACRR LDERQS NVW FLEAINGRPD+SEGLR
Sbjct: 181 VVKEILLKRYFSKEIRGGTQFPESDIVKACRRSLDERQSLNVWRFLEAINGRPDLSEGLR 240
Query: 240 KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
L CRSLIFVG+ SP+HSE++H+T K+DRR+SALVEV
Sbjct: 241 NLHCRSLIFVGDMSPYHSESLHITKKLDRRFSALVEV 277
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449494415|ref|XP_004159540.1| PREDICTED: pollen-specific protein SF21-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/274 (81%), Positives = 247/274 (90%)
Query: 5 SSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF 64
SSDSVS+DME+ GK+ L+KT +G +SVT+ GD DKPAL+TYPDLALN+M CFQGL F
Sbjct: 4 SSDSVSVDMESISCGGKEYLVKTCYGVVSVTVVGDLDKPALITYPDLALNHMFCFQGLMF 63
Query: 65 CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124
CPEACSLLLHNFCIYHI+PPGHE GAAAI D+PVLS DDLADQIAEVLN+FGL AVMCM
Sbjct: 64 CPEACSLLLHNFCIYHISPPGHELGAAAICPDDPVLSADDLADQIAEVLNYFGLSAVMCM 123
Query: 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184
GVTAGAYILTLFAMK+RHRV GLIL+SP+C AP WTEWLYNKVMSNLLY+YGMCGVVKEL
Sbjct: 124 GVTAGAYILTLFAMKHRHRVHGLILISPICTAPCWTEWLYNKVMSNLLYFYGMCGVVKEL 183
Query: 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244
LLKRYFSK+ RG +QVPESD+VQACRR LDERQSSNVW FLEA+NGRP+ISEGLRKL+CR
Sbjct: 184 LLKRYFSKDARGCSQVPESDLVQACRRSLDERQSSNVWRFLEAMNGRPNISEGLRKLKCR 243
Query: 245 SLIFVGESSPFHSEAVHMTSKIDRRYSALVEVWT 278
SLIFVG+ SPFHSEA HMT K+DRRYSALVEV +
Sbjct: 244 SLIFVGDRSPFHSEAHHMTVKLDRRYSALVEVQS 277
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564067|ref|XP_003550278.1| PREDICTED: pollen-specific protein SF21-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/259 (84%), Positives = 238/259 (91%)
Query: 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC 77
PS ++++I+T HGS+SV +YGDQDKPAL+TYPDLALNY+SCFQGL FCPEA LLLHNFC
Sbjct: 19 PSPQEHIIRTRHGSVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFCPEAYYLLLHNFC 78
Query: 78 IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFA 137
IYHI+PPGHE GAAAI D P+LSVDDLADQIAEVLN FGL AVMCMGVTAGAYILTLFA
Sbjct: 79 IYHISPPGHELGAAAIDQDHPILSVDDLADQIAEVLNFFGLSAVMCMGVTAGAYILTLFA 138
Query: 138 MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 197
MKYR RVLGLILVSPLCK PSWTEWLYNKVMSNLLY+YGMCGVVKE+LLKRYFSKE+RG
Sbjct: 139 MKYRQRVLGLILVSPLCKEPSWTEWLYNKVMSNLLYFYGMCGVVKEILLKRYFSKEIRGG 198
Query: 198 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS 257
Q+PESDIV++CRRLLDERQS NVW FLEAIN RPDISEGLRKL CRSLIFVG+ SPFHS
Sbjct: 199 TQLPESDIVKSCRRLLDERQSLNVWRFLEAINERPDISEGLRKLHCRSLIFVGDMSPFHS 258
Query: 258 EAVHMTSKIDRRYSALVEV 276
EAVHMTSK+DRR+SALVEV
Sbjct: 259 EAVHMTSKLDRRFSALVEV 277
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 299 | ||||||
| TAIR|locus:2181905 | 344 | NDL2 "AT5G11790" [Arabidopsis | 0.919 | 0.799 | 0.789 | 4.9e-117 | |
| TAIR|locus:2165101 | 346 | NDL1 "AT5G56750" [Arabidopsis | 0.919 | 0.794 | 0.728 | 9e-109 | |
| TAIR|locus:2050404 | 347 | NDL3 "AT2G19620" [Arabidopsis | 0.906 | 0.780 | 0.671 | 4.7e-103 | |
| UNIPROTKB|Q641F2 | 396 | ndrg1-a "Protein NDRG1-A" [Xen | 0.799 | 0.603 | 0.323 | 1.6e-29 | |
| UNIPROTKB|Q3SYX0 | 384 | NDRG1 "Protein NDRG1" [Bos tau | 0.802 | 0.625 | 0.312 | 4.4e-29 | |
| UNIPROTKB|B4DE86 | 367 | NDRG2 "Protein NDRG2" [Homo sa | 0.826 | 0.673 | 0.303 | 9.1e-29 | |
| UNIPROTKB|G3V4S9 | 301 | NDRG2 "Protein NDRG2" [Homo sa | 0.826 | 0.820 | 0.303 | 9.1e-29 | |
| UNIPROTKB|G3V5H8 | 273 | NDRG2 "Protein NDRG2" [Homo sa | 0.795 | 0.871 | 0.313 | 1.2e-28 | |
| UNIPROTKB|F1MTZ1 | 356 | NDRG2 "Protein NDRG2" [Bos tau | 0.826 | 0.693 | 0.295 | 1.5e-28 | |
| UNIPROTKB|F1MS38 | 384 | NDRG1 "Protein NDRG1" [Bos tau | 0.802 | 0.625 | 0.309 | 1.9e-28 |
| TAIR|locus:2181905 NDL2 "AT5G11790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1153 (410.9 bits), Expect = 4.9e-117, P = 4.9e-117
Identities = 218/276 (78%), Positives = 243/276 (88%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADSS DSVSIDME G+++L++T++G + V + GD DKPAL+TYPD+ALNYM CFQ
Sbjct: 1 MADSS-DSVSIDMEALSLGGQEHLVETTYGPVCVAVCGDPDKPALITYPDIALNYMFCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GL FCPEA SLLLHNFCIYHI+P GHE GA IS D P+LS DDLADQI EVLN+FGLGA
Sbjct: 60 GLLFCPEASSLLLHNFCIYHISPLGHELGAPMISVDAPLLSADDLADQIVEVLNYFGLGA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMKYR RVLGLILVSPLC+APSW+EWL NKVMSNLLYYYG CGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKYRQRVLGLILVSPLCQAPSWSEWLCNKVMSNLLYYYGTCGV 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKE+LLKRYFSKEVRGN VPESDIVQ CRRLL ERQS+NVW FLEAINGR D+SEGLRK
Sbjct: 180 VKEMLLKRYFSKEVRGNGHVPESDIVQECRRLLSERQSTNVWRFLEAINGRVDLSEGLRK 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
LQCR+LIF+GE+S +HSEAVHMT+K+DRRY ALVEV
Sbjct: 240 LQCRTLIFIGENSAYHSEAVHMTTKLDRRYGALVEV 275
|
|
| TAIR|locus:2165101 NDL1 "AT5G56750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
Identities = 201/276 (72%), Positives = 236/276 (85%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
M DS +VS+D+ T GK++ +KT+ G +SV +YGD++KPAL+TYPDLALN+MSCFQ
Sbjct: 1 MTDSYG-AVSVDVGTIYLGGKEHRVKTASGVVSVIVYGDREKPALITYPDLALNHMSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLFFCPEA SLLLHNFCIYHI+PPGHE GAA I ++ V S ++LADQI EVLN FGLG
Sbjct: 60 GLFFCPEAASLLLHNFCIYHISPPGHELGAAPICPNDSVPSAENLADQILEVLNFFGLGV 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMK+R RVLGLILVSPLCKAPSW+EW YNKV++NLLYYYGMCGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKHRERVLGLILVSPLCKAPSWSEWFYNKVITNLLYYYGMCGV 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKE LL+RYFSKEVRGN ++PESDI QACRRLLDERQ NV FL+AI+ RPDIS GL+K
Sbjct: 180 VKEFLLQRYFSKEVRGNVEIPESDIAQACRRLLDERQGINVLRFLDAIDRRPDISSGLKK 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
L+CR+LIF+G+ SPF+SEAVHM + +DR Y ALVEV
Sbjct: 240 LKCRTLIFIGDQSPFYSEAVHMAATLDRGYCALVEV 275
|
|
| TAIR|locus:2050404 NDL3 "AT2G19620" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 182/271 (67%), Positives = 231/271 (85%)
Query: 6 SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC 65
+++VS+D+E GK++ +KT HGS+SV +YGDQ+KPAL+TYPD+ALNYMSCFQGLF C
Sbjct: 5 NNAVSLDIEEICNGGKEHHVKTCHGSVSVVVYGDQEKPALITYPDVALNYMSCFQGLFLC 64
Query: 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMG 125
PEA SLLLHNFCIYHI+PPGHEFGAA + ++P SV+DLADQI EVLN F L AVMCMG
Sbjct: 65 PEAVSLLLHNFCIYHISPPGHEFGAAPVCSNDPSPSVEDLADQILEVLNFFSLEAVMCMG 124
Query: 126 VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185
+TAGAYIL+LFA+K++ RVLGLIL+SPLCKAPSW+EW Y KV+SNLLYYYGM G++K++
Sbjct: 125 ITAGAYILSLFAIKHKERVLGLILISPLCKAPSWSEWFYYKVVSNLLYYYGMSGLLKDIF 184
Query: 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245
L+RYFSKE RG+++VPE D+V CRRLL ER S++ FLEA+N R D+++GL+ L+CR+
Sbjct: 185 LQRYFSKEARGSSEVPERDVVHECRRLLGERHGSSLMRFLEAVNRRHDLTDGLKSLKCRT 244
Query: 246 LIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
LIFVG+ SPFHSE +HM + +DR+YSALVEV
Sbjct: 245 LIFVGDQSPFHSETLHMVTALDRKYSALVEV 275
|
|
| UNIPROTKB|Q641F2 ndrg1-a "Protein NDRG1-A" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 85/263 (32%), Positives = 140/263 (53%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T+HG + VT+ G ++P ++TY D+ LN+ +CF LF + + H F + H++
Sbjct: 38 IETAHGIVHVTMCGTPKLNRPVILTYHDIGLNHKTCFNSLFNFEDMHEISQH-FSVCHVD 96
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + V+ GL VM +G+ AGAYILT FA+ +
Sbjct: 97 APGQQEGAASFPAGYMYPSMDQLAEMLPGVVQQLGLRTVMGLGIGAGAYILTRFALNHPS 156
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNAQVP 201
V GL+L++ A W +W K+ G + ++++ FSK EV N P
Sbjct: 157 MVEGLVLININPCAEGWMDWAATKIS-------GWTNALPDMVISHLFSKDEVHSN---P 206
Query: 202 ESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESS 253
E +V+ R+ +L + +NV HF+++ N R D+ G L+C +L+ VG+SS
Sbjct: 207 E--LVETYRQHILHDINQNNVQHFVKSYNSRRDLEIERPIPGTNAVTLKCPALLVVGDSS 264
Query: 254 PFHSEAVHMTSKIDRRYSALVEV 276
P V SK+D + L+++
Sbjct: 265 PAVDAVVECNSKLDPTKTTLLKM 287
|
|
| UNIPROTKB|Q3SYX0 NDRG1 "Protein NDRG1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 82/262 (31%), Positives = 136/262 (51%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETLHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+
Sbjct: 96 APGQQDGAASFPTGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 202
V GL+L++ A W +W +K+ G + ++++ F KE N
Sbjct: 156 MVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMQN----N 204
Query: 203 SDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESSP 254
++V A R ++++ N+ F+ A NGR D+ G LQC +L+ VG+SSP
Sbjct: 205 VEVVHAYRHHVMNDMNPGNLQLFINAYNGRRDLEIERPMPGAHTVTLQCPALLVVGDSSP 264
Query: 255 FHSEAVHMTSKIDRRYSALVEV 276
V SK+D + L+++
Sbjct: 265 AVDAVVECNSKLDPTKTTLLKM 286
|
|
| UNIPROTKB|B4DE86 NDRG2 "Protein NDRG2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 81/267 (30%), Positives = 139/267 (52%)
Query: 17 PPSGKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLH 74
P + K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++
Sbjct: 31 PEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQ 89
Query: 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILT 134
NF H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL
Sbjct: 90 NFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILA 149
Query: 135 LFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE- 193
+A+ + V GL+L++ A W +W +K+ G+ + E++L FS+E
Sbjct: 150 RYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEE 202
Query: 194 VRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFV 249
+ GN S+++Q R ++ + N+ + + N R D++ G L+C ++ V
Sbjct: 203 LSGN-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVV 257
Query: 250 GESSPFHSEAVHMTSKIDRRYSALVEV 276
G+ +P V SK+D ++ +++
Sbjct: 258 GDQAPHEDAVVECNSKLDPTQTSFLKM 284
|
|
| UNIPROTKB|G3V4S9 NDRG2 "Protein NDRG2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 81/267 (30%), Positives = 139/267 (52%)
Query: 17 PPSGKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLH 74
P + K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++
Sbjct: 21 PEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQ 79
Query: 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILT 134
NF H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL
Sbjct: 80 NFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILA 139
Query: 135 LFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE- 193
+A+ + V GL+L++ A W +W +K+ G+ + E++L FS+E
Sbjct: 140 RYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEE 192
Query: 194 VRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFV 249
+ GN S+++Q R ++ + N+ + + N R D++ G L+C ++ V
Sbjct: 193 LSGN-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVV 247
Query: 250 GESSPFHSEAVHMTSKIDRRYSALVEV 276
G+ +P V SK+D ++ +++
Sbjct: 248 GDQAPHEDAVVECNSKLDPTQTSFLKM 274
|
|
| UNIPROTKB|G3V5H8 NDRG2 "Protein NDRG2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 81/258 (31%), Positives = 134/258 (51%)
Query: 17 PPSGKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLH 74
P + K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++
Sbjct: 21 PEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQ 79
Query: 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILT 134
NF H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL
Sbjct: 80 NFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILA 139
Query: 135 LFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE- 193
+A+ + V GL+L++ A W +W +K+ G+ + E++L FS+E
Sbjct: 140 RYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEE 192
Query: 194 VRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFV 249
+ GN S+++Q R ++ + N+ + + N R D++ G L+C ++ V
Sbjct: 193 LSGN-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVV 247
Query: 250 GESSPFHSEAVHMTSKID 267
G+ +P V SK+D
Sbjct: 248 GDQAPHEDAVVECNSKLD 265
|
|
| UNIPROTKB|F1MTZ1 NDRG2 "Protein NDRG2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 79/267 (29%), Positives = 139/267 (52%)
Query: 17 PPSGKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLH 74
P K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF + ++
Sbjct: 21 PEVAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFADMQEII-Q 79
Query: 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILT 134
NF H++ PG E GA S+D LAD I +L + ++ +GV AGAY+L+
Sbjct: 80 NFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGIGVGAGAYVLS 139
Query: 135 LFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE- 193
+A+ + V GL+L++ A W +W +K+ G+ + E++L FS+E
Sbjct: 140 RYALTHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSISEMILGHLFSQEE 192
Query: 194 VRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFV 249
+ GN S+++Q R ++ + N+ + + N R D++ G L+C ++ V
Sbjct: 193 LSGN-----SELIQKYRNIIAHAPNLDNIELYWNSYNNRRDLNFVRGGDTTLKCPVMLVV 247
Query: 250 GESSPFHSEAVHMTSKIDRRYSALVEV 276
G+ +P V SK+D ++ ++V
Sbjct: 248 GDQAPHEDAVVECNSKLDPTQTSFLKV 274
|
|
| UNIPROTKB|F1MS38 NDRG1 "Protein NDRG1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 81/262 (30%), Positives = 135/262 (51%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETLHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+
Sbjct: 96 APGQQDGAASFPTGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 202
V GL+L++ A W +W +K+ G + ++++ F KE N
Sbjct: 156 MVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMQN----N 204
Query: 203 SDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESSP 254
++V A R ++++ N+ F+ A N R D+ G LQC +L+ VG+SSP
Sbjct: 205 VEVVHAYRHHVMNDMNPGNLQLFINAYNSRRDLEIERPMPGAHTVTLQCPALLVVGDSSP 264
Query: 255 FHSEAVHMTSKIDRRYSALVEV 276
V SK+D + L+++
Sbjct: 265 AVDAVVECNSKLDPTKTTLLKM 286
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00032169001 | SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (344 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 299 | |||
| pfam03096 | 284 | pfam03096, Ndr, Ndr family | 1e-119 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 2e-09 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 9e-08 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 1e-07 |
| >gnl|CDD|190521 pfam03096, Ndr, Ndr family | Back alignment and domain information |
|---|
Score = 343 bits (881), Expect = e-119
Identities = 122/258 (47%), Positives = 156/258 (60%), Gaps = 9/258 (3%)
Query: 23 NLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYH 80
++I+T GS+ VT+YGD KP ++TY DL LN+ SCFQGLF +L NFCIYH
Sbjct: 2 HIIETPCGSVHVTVYGDPKGKKPPILTYHDLGLNHKSCFQGLFNSESM-QEILQNFCIYH 60
Query: 81 INPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140
++ PG E GAA+ P S+DDLAD I VL+HF L +V+ MGV AGAYIL FA+K+
Sbjct: 61 VDAPGQEDGAASFPGGYPYPSLDDLADMIPVVLDHFRLKSVIGMGVGAGAYILARFALKH 120
Query: 141 RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQV 200
RV GL+L++P A W EW YNK+MS LLYYYGM K+ LL YF KE N
Sbjct: 121 PERVEGLVLINPDPNAAGWIEWFYNKLMSKLLYYYGMTDSAKDYLLAHYFGKEELSN--- 177
Query: 201 PESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFVGESSPFHSE 258
SDIVQ R+ L ER N+ +LEA N R D++ L C L+ VG+ SP
Sbjct: 178 -NSDIVQEYRKFLKERLNPKNLQLYLEAYNNRRDLTIERGGLETCPVLLVVGDKSPHVDA 236
Query: 259 AVHMTSKIDRRYSALVEV 276
V SK+D + L++V
Sbjct: 237 VVECNSKLDPTKTTLLKV 254
|
This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases pfam00561, suggesting that this family may have an enzymatic function (Bateman A pers. obs.). Length = 284 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 57.3 bits (137), Expect = 2e-09
Identities = 34/215 (15%), Positives = 64/215 (29%), Gaps = 16/215 (7%)
Query: 55 YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN 114
+ + L + + + GH G + + S+ AD +A +L+
Sbjct: 30 FPGSSSVWRPVFKVLPALAARYRVIAPDLRGH--GRSDPAGY----SLSAYADDLAALLD 83
Query: 115 HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174
GL V+ +G + G + A+++ RV GL+L+ P L + L
Sbjct: 84 ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAA 143
Query: 175 YGMCG----------VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHF 224
++ L L + R + R +
Sbjct: 144 LADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAA 203
Query: 225 LEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEA 259
D+ L ++ +LI GE P
Sbjct: 204 ALLALLDRDLRAALARITVPTLIIHGEDDPVVPAE 238
|
Length = 282 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 9e-08
Identities = 46/232 (19%), Positives = 77/232 (33%), Gaps = 34/232 (14%)
Query: 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTL 135
F + + G + D DDLA+ + +L+ GL V +G + G I
Sbjct: 1 FDVIAFDLRGFGRSSPPK--DFADYRFDDLAEDLEALLDALGLDKVNLVGHSMGGLIALA 58
Query: 136 FAMKYRHRVLGLILVSPLC----KAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191
+A KY RV L+LV + +P ++ + ++ E LL R
Sbjct: 59 YAAKYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLD--NFFNRLYDSVEALLGRAI- 115
Query: 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLE---------AINGR---PDISEGLR 239
+ ++ L + + S++ F E G D S L+
Sbjct: 116 -------KQFQALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALK 168
Query: 240 KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLL 291
+ +LI G+ P + +AL V I G L L
Sbjct: 169 DIDVPTLIIWGDDDPLVPPDAS------EKLAALFPNAQLVVIDDAGHLAQL 214
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 1e-07
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 70 SLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAG 129
L + + + PGH G + P S++D A +A +L+ GLG V+ +G + G
Sbjct: 19 EALAAGYRVLAPDLPGH--GDSDGPPRTPY-SLEDDAADLAALLDALGLGPVVLVGHSLG 75
Query: 130 AYILTLFAMKYRHRVLGLILVSPLCKAPS 158
+ A + RV GL+L+SP +
Sbjct: 76 GAVALAAAARRPERVAGLVLISPPLRDLE 104
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 100.0 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.98 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.98 | |
| PLN02578 | 354 | hydrolase | 99.98 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.97 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.97 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.97 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.97 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.97 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.97 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.97 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.96 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.96 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.96 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.96 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.96 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.96 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.96 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.95 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.94 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.94 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.94 | |
| PLN02511 | 388 | hydrolase | 99.93 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.93 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.92 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.91 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.91 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.9 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.9 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.89 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.89 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.89 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.88 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.88 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.87 | |
| PRK10566 | 249 | esterase; Provisional | 99.86 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.84 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.83 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.83 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.83 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.82 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.82 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.77 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.77 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.77 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.74 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.73 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.73 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.72 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.7 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.68 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.67 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.67 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.66 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.66 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.64 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.64 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.64 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.63 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.62 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.6 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.6 | |
| PLN00021 | 313 | chlorophyllase | 99.6 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.58 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.54 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.49 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.47 | |
| PRK10115 | 686 | protease 2; Provisional | 99.47 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.45 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.44 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.44 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.4 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.4 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.39 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.38 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.34 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.33 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.32 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.32 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.32 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.31 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.31 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.3 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.27 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.27 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.25 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.19 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.18 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.17 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.14 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.1 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.07 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.06 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.02 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.98 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.94 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.94 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.93 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.93 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.89 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.88 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.88 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.88 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.84 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.84 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.83 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.81 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.8 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.8 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.79 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.77 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.75 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.74 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.71 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.68 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.62 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.62 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.57 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.56 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.53 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.51 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.47 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.44 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.39 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.35 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.34 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.3 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.24 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.21 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.2 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.2 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.17 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.14 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.11 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.1 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.07 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.06 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.9 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.87 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.87 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.84 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 97.77 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.72 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.72 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.72 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.71 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.7 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.67 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.58 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 97.58 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.57 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.54 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 97.52 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.51 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.46 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 97.46 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.45 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.41 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.38 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 97.22 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.11 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 97.04 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 96.99 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.96 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 96.93 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 96.91 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.91 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.81 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.79 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 96.76 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.74 | |
| PLN00413 | 479 | triacylglycerol lipase | 96.71 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 96.64 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.62 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.61 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 96.57 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 96.43 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 96.39 | |
| PLN02408 | 365 | phospholipase A1 | 96.24 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 96.13 | |
| PLN02209 | 437 | serine carboxypeptidase | 96.08 | |
| PLN02310 | 405 | triacylglycerol lipase | 95.98 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.98 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 95.96 | |
| PLN02324 | 415 | triacylglycerol lipase | 95.79 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 95.66 | |
| PLN02802 | 509 | triacylglycerol lipase | 95.61 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 95.58 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 95.49 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.49 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.41 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 95.34 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 95.29 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 95.25 | |
| PLN02719 | 518 | triacylglycerol lipase | 95.25 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.24 | |
| PLN02761 | 527 | lipase class 3 family protein | 95.24 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 94.8 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 94.67 | |
| PLN02847 | 633 | triacylglycerol lipase | 94.48 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 94.47 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 94.19 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 94.11 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 94.07 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 93.83 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 92.93 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 92.9 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 92.72 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 91.7 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 91.67 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 90.79 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 90.79 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 88.95 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 88.36 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 87.77 | |
| TIGR03131 | 295 | malonate_mdcH malonate decarboxylase, epsilon subu | 87.42 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 85.46 | |
| cd01714 | 202 | ETF_beta The electron transfer flavoprotein (ETF) | 80.04 |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=217.95 Aligned_cols=285 Identities=47% Similarity=0.746 Sum_probs=252.9
Q ss_pred CCCCCCCcccccCCCCCCCC---CcceeecCCceEEEEeccCCC--CCeEEEecccccchhhhccccccCchhhhcccCc
Q 022316 1 MADSSSDSVSIDMETPPPSG---KDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN 75 (299)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~l~~~~~g~~~--~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~ 75 (299)
|+. ..+....|++...... +++.|++..|.+++.++|+++ +|+|+-.|.+|.|+.+|++..|..+.+...+.+
T Consensus 1 M~~-~~~~~~~d~~pl~~~~~~~~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~- 78 (326)
T KOG2931|consen 1 MAE-LQDVVSTDIKPLLEGGATCQEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH- 78 (326)
T ss_pred CCc-ccccccccchhhhcCCCcceeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-
Confidence 444 4555566877766555 899999999999999999876 899999999999999999999887886666555
Q ss_pred eEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 76 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
|.|+.+|.||+-...+..|.++...|+++++++|..++++++++.++-+|...|++|..++|..||++|.++|||++.+.
T Consensus 79 fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 79 FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC 158 (326)
T ss_pred eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC
Confidence 99999999999877777777778899999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhcCCCCh
Q 022316 156 APSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDI 234 (299)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 234 (299)
..+|..|...+...++++..++.....+.++.+.|+.+.... +.++++.|++.+... .+.++..++.++..|.|+
T Consensus 159 a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~----~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL 234 (326)
T KOG2931|consen 159 AKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN----NSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDL 234 (326)
T ss_pred CchHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc----cHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCc
Confidence 999999999999999999999999999999999999998877 799999999988875 558999999999998888
Q ss_pred hhhhcc----ccccEEEEecCCCcchhhhHHHhhhccccCceEEEEcCchhhhHhHHHHHH
Q 022316 235 SEGLRK----LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLL 291 (299)
Q Consensus 235 ~~~~~~----i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~ 291 (299)
...... ++||+|++.|++.+.++.+.++..++...+..++.+.++|-.+..+-+..+
T Consensus 235 ~~~r~~~~~tlkc~vllvvGd~Sp~~~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl 295 (326)
T KOG2931|consen 235 SIERPKLGTTLKCPVLLVVGDNSPHVSAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKL 295 (326)
T ss_pred cccCCCcCccccccEEEEecCCCchhhhhhhhhcccCcccceEEEEcccCCcccccCchHH
Confidence 755444 459999999999999999999999999888999999999988877544443
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=233.49 Aligned_cols=262 Identities=16% Similarity=0.130 Sum_probs=167.2
Q ss_pred CCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC---
Q 022316 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD--- 95 (299)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~--- 95 (299)
+.+.++++.++.+++|...|+ ++|+|||+||++.+... |... .+.|++.|+|+++|+||||.|..+.+.
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~-~~~~vlllHG~~~~~~~------w~~~-~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~ 78 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGT-SGPALVLVHGFGGNADH------WRKN-TPVLAKSHRVYAIDLLGYGYSDKPNPRSAP 78 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCC-CCCeEEEECCCCCChhH------HHHH-HHHHHhCCeEEEEcCCCCCCCCCCcccccc
Confidence 445678888999999999884 35889999999998855 7444 566677789999999999999753221
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcc---hhHHH--Hhhhhhh
Q 022316 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWL--YNKVMSN 170 (299)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~--~~~~~~~ 170 (299)
....++++++++++.++++.++.++++|+||||||++++.+|.++|++|+++|++++...... ..... ....+..
T Consensus 79 ~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
T PLN02824 79 PNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQN 158 (294)
T ss_pred ccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHH
Confidence 123589999999999999999999999999999999999999999999999999998653210 00000 0000001
Q ss_pred hHHhhcc----------hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhh--cCCCChhhhh
Q 022316 171 LLYYYGM----------CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGL 238 (299)
Q Consensus 171 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 238 (299)
.+..... .... ...+...+.... ..+++..+.+..... .......+...+ .........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l 230 (294)
T PLN02824 159 LLRETAVGKAFFKSVATPETV-KNILCQCYHDDS-----AVTDELVEAILRPGL--EPGAVDVFLDFISYSGGPLPEELL 230 (294)
T ss_pred HHhchhHHHHHHHhhcCHHHH-HHHHHHhccChh-----hccHHHHHHHHhccC--CchHHHHHHHHhccccccchHHHH
Confidence 0000000 0000 111111111110 001222222221111 111111111111 1112334568
Q ss_pred ccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 239 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 239 ~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+++++|+|+|+|++|.++ +.++.+.+.++. .++++++++||.++.|..+.++..+..+
T Consensus 231 ~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (294)
T PLN02824 231 PAVKCPVLIAWGEKDPWEPVELGRAYANFDAV--EDFIVLPGVGHCPQDEAPELVNPLIESF 290 (294)
T ss_pred hhcCCCeEEEEecCCCCCChHHHHHHHhcCCc--cceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 899999999999999987 455555555543 7899999999999998777766555443
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=217.24 Aligned_cols=266 Identities=46% Similarity=0.722 Sum_probs=201.2
Q ss_pred cceeecCCceEEEEeccCCC--CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 22 DNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~--~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
++.++++.|.+++.+.|+++ +|+||-.|..|.|+.+|+..+|.. .....+.+.|.++-+|.||+.....+.|.+...
T Consensus 1 eh~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~-~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 1 EHDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNF-EDMQEILQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp -EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCS-HHHHHHHTTSEEEEEE-TTTSTT-----TT---
T ss_pred CceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcc-hhHHHHhhceEEEEEeCCCCCCCcccccccccc
Confidence 57899999999999999876 999999999999999999999875 446677889999999999999887777777788
Q ss_pred ccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchh
Q 022316 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
.|++++++++..++++++++.++-+|...|++|-.++|..+|++|.++||+++.+...+|..|...+...+.++..++..
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~ 159 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTS 159 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS
T ss_pred cCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred HHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhc-ccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcchhh
Q 022316 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSE 258 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~ 258 (299)
...+.++.+.|+...... +.++.+.++..+.+ ..+.++..+++++..|.|+....+...||+|++.|+..+.++.
T Consensus 160 ~~~d~Ll~h~Fg~~~~~~----n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~ 235 (283)
T PF03096_consen 160 SVKDYLLWHYFGKEEEEN----NSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDD 235 (283)
T ss_dssp -HHHHHHHHHS-HHHHHC----T-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHH
T ss_pred chHHhhhhcccccccccc----cHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhh
Confidence 999999999999988765 68899999998876 4668999999999999999988889999999999999999998
Q ss_pred hHHHhhhccccCceEEEEcCchhhhHhHHHHHHH
Q 022316 259 AVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLA 292 (299)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~ 292 (299)
+.++..+++....+++.+++||-.++.|-+..++
T Consensus 236 vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~kla 269 (283)
T PF03096_consen 236 VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLA 269 (283)
T ss_dssp HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHH
T ss_pred HHHHHhhcCcccceEEEecccCCcccccCcHHHH
Confidence 9999999988889999999999999988776654
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=229.03 Aligned_cols=253 Identities=17% Similarity=0.142 Sum_probs=161.6
Q ss_pred ceeecCCceEEEEec-cCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 23 NLIKTSHGSLSVTIY-GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~-g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
+++++++.+++|... |.+++++|||+||++.+... |. .+.+.|.++|+|+++|+||||.|+.+. ..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~------w~-~~~~~L~~~~~vi~~Dl~G~G~S~~~~----~~~~ 73 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLEL------VF-PFIEALDPDLEVIAFDVPGVGGSSTPR----HPYR 73 (276)
T ss_pred EEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHH------HH-HHHHHhccCceEEEECCCCCCCCCCCC----CcCc
Confidence 467778889999775 33455789999999888754 63 345667889999999999999996431 2479
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHH-HHhhhhhhhHHhhcchhH
Q 022316 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW-LYNKVMSNLLYYYGMCGV 180 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (299)
++++++++.++++.+++++++|+||||||.+++.+|.++|++|+++|+++++......... ................ .
T Consensus 74 ~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 152 (276)
T TIGR02240 74 FPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS-H 152 (276)
T ss_pred HHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccc-c
Confidence 9999999999999999999999999999999999999999999999999987653211100 0000000000000000 0
Q ss_pred HHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hh
Q 022316 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 258 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~ 258 (299)
. ......++...... +++....+...........+......... .+....+.+|++|+|+|+|++|+++ +.
T Consensus 153 ~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~v~~~~ 225 (276)
T TIGR02240 153 G-IHIAPDIYGGAFRR-----DPELAMAHASKVRSGGKLGYYWQLFAGLG-WTSIHWLHKIQQPTLVLAGDDDPIIPLIN 225 (276)
T ss_pred c-cchhhhhccceeec-----cchhhhhhhhhcccCCCchHHHHHHHHcC-CchhhHhhcCCCCEEEEEeCCCCcCCHHH
Confidence 0 00111122211110 12222222222221111111111111111 2334557899999999999999998 55
Q ss_pred hHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 259 AVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
.+++.+.+++ ++++.+++ ||.++.|-.+.+++.++.
T Consensus 226 ~~~l~~~~~~--~~~~~i~~-gH~~~~e~p~~~~~~i~~ 261 (276)
T TIGR02240 226 MRLLAWRIPN--AELHIIDD-GHLFLITRAEAVAPIIMK 261 (276)
T ss_pred HHHHHHhCCC--CEEEEEcC-CCchhhccHHHHHHHHHH
Confidence 6777777765 77888875 999998766666554443
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=232.09 Aligned_cols=273 Identities=14% Similarity=0.174 Sum_probs=169.4
Q ss_pred cccccCCCCCCCCCcceeecCCc-eEEEEeccCC----CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEEC
Q 022316 8 SVSIDMETPPPSGKDNLIKTSHG-SLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82 (299)
Q Consensus 8 ~~~~~~~~~~~~~~~~~i~~~~~-~l~~~~~g~~----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D 82 (299)
+..++.+...+....+.+..++. +++|...|++ ++|+|||+||++.+... |.+. ...|.++|+|+++|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~------w~~~-~~~L~~~~~via~D 121 (360)
T PLN02679 49 SGGVEAELEEIYERCKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH------WRRN-IGVLAKNYTVYAID 121 (360)
T ss_pred CccccccHHHhhccCceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHH------HHHH-HHHHhcCCEEEEEC
Confidence 33455555566666777888887 9999999964 46899999999988754 7444 45667799999999
Q ss_pred CCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH-ccCcccEEEEecCCCCCcch--
Q 022316 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSW-- 159 (299)
Q Consensus 83 ~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~-~p~~v~~lvl~~~~~~~~~~-- 159 (299)
+||||.|+.+. ...++++++++++.++++.++.++++|+||||||.+++.+|.+ +|++|+++|++++.......
T Consensus 122 l~G~G~S~~~~---~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~ 198 (360)
T PLN02679 122 LLGFGASDKPP---GFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAV 198 (360)
T ss_pred CCCCCCCCCCC---CccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccc
Confidence 99999996532 1248999999999999999999999999999999999998874 79999999999986543211
Q ss_pred -hHHHHhhh--hhhhH----HhhcchhHH-----HHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHh
Q 022316 160 -TEWLYNKV--MSNLL----YYYGMCGVV-----KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA 227 (299)
Q Consensus 160 -~~~~~~~~--~~~~~----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (299)
..+..... ....+ ......... ....+..++...+... ....++..+.+...... ......+...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 275 (360)
T PLN02679 199 VDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNK-EAVDDELVEIIRGPADD--EGALDAFVSI 275 (360)
T ss_pred cchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCc-ccCCHHHHHHHHhhccC--CChHHHHHHH
Confidence 11110000 00000 000000000 0001111111110000 00013333332221111 1111111111
Q ss_pred hc--CCCChhhhhccccccEEEEecCCCcch-hh------hHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 228 IN--GRPDISEGLRKLQCRSLIFVGESSPFH-SE------AVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 228 ~~--~~~~~~~~~~~i~~P~lii~G~~D~~~-~~------~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
.. ...+....+.+|++|+|+|+|++|.++ .. ...+.+.+++ .+++++|++||.++.|.++.++.-+
T Consensus 276 ~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~--~~l~~i~~aGH~~~~E~Pe~~~~~I 350 (360)
T PLN02679 276 VTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN--VTLYVLEGVGHCPHDDRPDLVHEKL 350 (360)
T ss_pred HhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCc--eEEEEcCCCCCCccccCHHHHHHHH
Confidence 11 113445678899999999999999987 22 1234444554 8899999999999988666654433
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=227.22 Aligned_cols=263 Identities=9% Similarity=-0.016 Sum_probs=160.8
Q ss_pred cCCCCCCCCCcceeecCC-----ceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCC
Q 022316 12 DMETPPPSGKDNLIKTSH-----GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPG 85 (299)
Q Consensus 12 ~~~~~~~~~~~~~i~~~~-----~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G 85 (299)
+.+++++ ..++++.++ .+++|...|++++|+|||+||++.+... |.+. .+.|. +||+|+++|+||
T Consensus 13 ~~~~~~~--~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~------w~~~-~~~L~~~gy~vi~~Dl~G 83 (302)
T PRK00870 13 NLPDYPF--APHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYL------YRKM-IPILAAAGHRVIAPDLIG 83 (302)
T ss_pred CCcCCCC--CceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhh------HHHH-HHHHHhCCCEEEEECCCC
Confidence 3444444 455677776 5799999997678899999999877644 7444 55565 589999999999
Q ss_pred CCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch--hHHH
Q 022316 86 HEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW--TEWL 163 (299)
Q Consensus 86 ~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~ 163 (299)
||.|+.+ .....++++++++++.++++++++++++++||||||.+++.+|.++|++|+++|++++....... ....
T Consensus 84 ~G~S~~~--~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 161 (302)
T PRK00870 84 FGRSDKP--TRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAF 161 (302)
T ss_pred CCCCCCC--CCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHH
Confidence 9999643 21235899999999999999999999999999999999999999999999999999975322110 1100
Q ss_pred HhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhc----------CCCC
Q 022316 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN----------GRPD 233 (299)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 233 (299)
......... .... ....++....... ..++....+..................+. ....
T Consensus 162 --~~~~~~~~~--~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (302)
T PRK00870 162 --WAWRAFSQY--SPVL----PVGRLVNGGTVRD---LSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRA 230 (302)
T ss_pred --hhhhccccc--Cchh----hHHHHhhcccccc---CCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHH
Confidence 000000000 0000 0001110000000 01122221111000000000000000000 0001
Q ss_pred hhhhhccccccEEEEecCCCcch-hhhHHHhhhcccc-CceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 234 ISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRR-YSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 234 ~~~~~~~i~~P~lii~G~~D~~~-~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
....+.++++|+++|+|++|+++ ...+.+.+.+++. ...+++++++||.+..|..+.++..+.
T Consensus 231 ~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 295 (302)
T PRK00870 231 AWAVLERWDKPFLTAFSDSDPITGGGDAILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVL 295 (302)
T ss_pred HHHhhhcCCCceEEEecCCCCcccCchHHHHhhcccccccceeeecCCCccchhhChHHHHHHHH
Confidence 22456889999999999999998 3336677777652 234789999999999876666554443
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=220.74 Aligned_cols=264 Identities=14% Similarity=0.121 Sum_probs=166.3
Q ss_pred CCCCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC
Q 022316 16 PPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (299)
Q Consensus 16 ~~~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~ 95 (299)
..++.++..+++++++++|...| ++|+|||+||++.+... | ..+...+.++|+|+++|+||||.|+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~i~y~~~G--~~~~iv~lHG~~~~~~~------~-~~~~~~l~~~~~vi~~D~~G~G~S~~~~-- 78 (286)
T PRK03204 10 QLYPFESRWFDSSRGRIHYIDEG--TGPPILLCHGNPTWSFL------Y-RDIIVALRDRFRCVAPDYLGFGLSERPS-- 78 (286)
T ss_pred ccccccceEEEcCCcEEEEEECC--CCCEEEEECCCCccHHH------H-HHHHHHHhCCcEEEEECCCCCCCCCCCC--
Confidence 34667788899999999999998 46899999999866543 6 4445677888999999999999996432
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhh
Q 022316 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (299)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (299)
...++++++++++.+++++++.++++++||||||.+++.+|..+|++|+++|++++........... .........
T Consensus 79 -~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~ 154 (286)
T PRK03204 79 -GFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMK---AFSRVMSSP 154 (286)
T ss_pred -ccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHH---HHHHHhccc
Confidence 1247899999999999999999999999999999999999999999999999988754322110000 000000000
Q ss_pred cchh-HH-HHHHHHhhhccccccCCCCCchHHHHHHHHhhhccc-ccchHHHHHhhcCCC----Chhhhhcc--ccccEE
Q 022316 176 GMCG-VV-KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGRP----DISEGLRK--LQCRSL 246 (299)
Q Consensus 176 ~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~--i~~P~l 246 (299)
.... .. ......+++....... .+++....+........ ..........+.... +....+.+ +++||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ptl 231 (286)
T PRK03204 155 PVQYAILRRNFFVERLIPAGTEHR---PSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTL 231 (286)
T ss_pred cchhhhhhhhHHHHHhccccccCC---CCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeE
Confidence 0000 00 0111122221111101 01222222211111000 000000000010000 01011111 289999
Q ss_pred EEecCCCcch--h-hhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhcC
Q 022316 247 IFVGESSPFH--S-EAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESEF 299 (299)
Q Consensus 247 ii~G~~D~~~--~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~~ 299 (299)
+|+|++|.++ . ..+.+.+.+++ .++++++++||.++.|.++.+++.+..+|
T Consensus 232 iI~G~~D~~~~~~~~~~~~~~~ip~--~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 232 LVWGMKDVAFRPKTILPRLRATFPD--HVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred EEecCCCcccCcHHHHHHHHHhcCC--CeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 9999999886 3 34666777765 88999999999999999999988887664
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=222.95 Aligned_cols=258 Identities=10% Similarity=0.086 Sum_probs=160.9
Q ss_pred CCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
.+.+.+.++.++.+++|...| ++|+|||+||++.+... |.. +.+.|.+.++|+++|+||||.|+.+.
T Consensus 5 ~~~~~~~~~~~g~~i~y~~~G--~g~~vvllHG~~~~~~~------w~~-~~~~L~~~~~via~D~~G~G~S~~~~---- 71 (295)
T PRK03592 5 PPGEMRRVEVLGSRMAYIETG--EGDPIVFLHGNPTSSYL------WRN-IIPHLAGLGRCLAPDLIGMGASDKPD---- 71 (295)
T ss_pred CCCcceEEEECCEEEEEEEeC--CCCEEEEECCCCCCHHH------HHH-HHHHHhhCCEEEEEcCCCCCCCCCCC----
Confidence 344556778888899999999 56899999999888744 744 45666766799999999999996532
Q ss_pred CcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH-hhhhhhhHHhhc
Q 022316 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-NKVMSNLLYYYG 176 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 176 (299)
..++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++......+..... .......+....
T Consensus 72 ~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (295)
T PRK03592 72 IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPG 151 (295)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcc
Confidence 2479999999999999999999999999999999999999999999999999998543322111100 000011111101
Q ss_pred chhH-H--HHHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhc----------CCCChhhhhcccc
Q 022316 177 MCGV-V--KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAIN----------GRPDISEGLRKLQ 242 (299)
Q Consensus 177 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~i~ 242 (299)
.... . .......++....... ..++....+...+... .......+..... ...+....+.+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 228 (295)
T PRK03592 152 EGEEMVLEENVFIERVLPGSILRP---LSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSD 228 (295)
T ss_pred cccccccchhhHHhhcccCccccc---CCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCC
Confidence 0000 0 0011121221111000 0123223222211111 0001111111100 0012334578899
Q ss_pred ccEEEEecCCCcch--hhhHHHhhh-ccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 243 CRSLIFVGESSPFH--SEAVHMTSK-IDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 243 ~P~lii~G~~D~~~--~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
+|+|+|+|++|.++ ....+.... +++ .++++++++||.++.|.++.++.
T Consensus 229 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~v~~ 280 (295)
T PRK03592 229 VPKLLINAEPGAILTTGAIRDWCRSWPNQ--LEITVFGAGLHFAQEDSPEEIGA 280 (295)
T ss_pred CCeEEEeccCCcccCcHHHHHHHHHhhhh--cceeeccCcchhhhhcCHHHHHH
Confidence 99999999999997 334444433 443 78999999999999886666553
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=213.19 Aligned_cols=270 Identities=14% Similarity=0.104 Sum_probs=178.9
Q ss_pred CCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
..+.++++.++.+++|.+.|++++|.|+++||++.+..+ |+.++..+...||+|+++|+||+|.|+.+ ....
T Consensus 21 ~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wys------wr~q~~~la~~~~rviA~DlrGyG~Sd~P--~~~~ 92 (322)
T KOG4178|consen 21 AISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYS------WRHQIPGLASRGYRVIAPDLRGYGFSDAP--PHIS 92 (322)
T ss_pred hcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchh------hhhhhhhhhhcceEEEecCCCCCCCCCCC--CCcc
Confidence 446678888999999999999999999999999999877 86665555556899999999999999764 4456
Q ss_pred cccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHH------HhhhhhhhH
Q 022316 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL------YNKVMSNLL 172 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~------~~~~~~~~~ 172 (299)
.||+..++.|+..++++++.++++++||+||++||+.+|..+|++|+++|+++.+...+...... ......-..
T Consensus 93 ~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~f 172 (322)
T KOG4178|consen 93 EYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLF 172 (322)
T ss_pred eeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEec
Confidence 79999999999999999999999999999999999999999999999999999777622111000 000000000
Q ss_pred Hhhcchh-----HHHHHHHHhhhccccc-----cCCC-----CCchHHHHHHHHhhhcccccchHHHHHhhcCCC-Chhh
Q 022316 173 YYYGMCG-----VVKELLLKRYFSKEVR-----GNAQ-----VPESDIVQACRRLLDERQSSNVWHFLEAINGRP-DISE 236 (299)
Q Consensus 173 ~~~~~~~-----~~~~~~~~~~~~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 236 (299)
+..+..+ ...+.+...++..... ...+ ....+.++.+...+......+...+.+.+...+ ....
T Consensus 173 Q~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~ 252 (322)
T KOG4178|consen 173 QEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPW 252 (322)
T ss_pred cccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccc
Confidence 0011111 0001122222221111 0000 012444555555444333444444555554433 2345
Q ss_pred hhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 237 GLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 237 ~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.+.+|++|+++|+|+.|.+. ....+..++.-..-.+.++++++||.+.+|-+++++..+.
T Consensus 253 ~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~ 314 (322)
T KOG4178|consen 253 ALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAIL 314 (322)
T ss_pred cccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHH
Confidence 57889999999999999997 3223333333222257889999999999887766654433
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-32 Score=223.14 Aligned_cols=262 Identities=13% Similarity=0.123 Sum_probs=154.9
Q ss_pred cCCceEEEEeccCCC-------CCeEEEecccccchhhhccccc----cCchhhhcccCceEEEEECCCCCCCCCCCCCC
Q 022316 27 TSHGSLSVTIYGDQD-------KPALVTYPDLALNYMSCFQGLF----FCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (299)
Q Consensus 27 ~~~~~l~~~~~g~~~-------~p~lvl~HG~~~~~~~~~~~~~----w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~ 95 (299)
.++.+++|...|+++ +|+|||+||++.++.......+ |. ....++.++|+||++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~-~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFG-PGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcC-CCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 456789999999654 7899999999988654110010 11 11233467899999999999999643211
Q ss_pred ---CCCcccHHHHHHHHHHH-HHhcCCCcEE-EEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhh
Q 022316 96 ---DEPVLSVDDLADQIAEV-LNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (299)
Q Consensus 96 ---~~~~~~~~~~~~~l~~~-l~~l~~~~~~-lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (299)
....++++++++++..+ ++++++++++ |+||||||++|+.+|.++|++|+++|++++.+.......+........
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~ 205 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIE 205 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHH
Confidence 01248999999998885 4889999986 899999999999999999999999999998653321111111111001
Q ss_pred hHHhh------cc---hhHHHHHH-HHhhhccc----cccCCCCCchHH-HHHHHHhhh---cccccchHHHHHhhcCCC
Q 022316 171 LLYYY------GM---CGVVKELL-LKRYFSKE----VRGNAQVPESDI-VQACRRLLD---ERQSSNVWHFLEAINGRP 232 (299)
Q Consensus 171 ~~~~~------~~---~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 232 (299)
..... .. ........ ...++... ..... ..... ...+..... ......+....... ...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 282 (360)
T PRK06489 206 SIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQA--PTRAAADKLVDERLAAPVTADANDFLYQWDSS-RDY 282 (360)
T ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhc--CChHHHHHHHHHHHHhhhhcCHHHHHHHHHHh-hcc
Confidence 00000 00 00110000 00000000 00000 00111 111111111 11122222222222 225
Q ss_pred ChhhhhccccccEEEEecCCCcch--hhh--HHHhhhccccCceEEEEcCc----hhhhHhHHHHHHHHhh
Q 022316 233 DISEGLRKLQCRSLIFVGESSPFH--SEA--VHMTSKIDRRYSALVEVWTR----VYISLLGFLVLLASFC 295 (299)
Q Consensus 233 ~~~~~~~~i~~P~lii~G~~D~~~--~~~--~~~~~~~~~~~~~~~~~~~~----~H~~~~~f~~~~~~~~ 295 (299)
+..+.+.+|++|||+|+|++|.++ +.. +.+.+.+++ .+++++|++ ||.++ +-++.++.-+
T Consensus 283 d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~--a~l~~i~~a~~~~GH~~~-e~P~~~~~~i 350 (360)
T PRK06489 283 NPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH--GRLVLIPASPETRGHGTT-GSAKFWKAYL 350 (360)
T ss_pred ChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC--CeEEEECCCCCCCCcccc-cCHHHHHHHH
Confidence 667789999999999999999997 332 567777765 889999996 99987 6555554433
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=226.06 Aligned_cols=266 Identities=15% Similarity=0.166 Sum_probs=157.6
Q ss_pred CcceeecCCceEEEEeccCCC---CCeEEEecccccchhhhccccccCchhhhcc----cCceEEEEECCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYGDQD---KPALVTYPDLALNYMSCFQGLFFCPEACSLL----LHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~---~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l----~~~~~vi~~D~~G~G~S~~~~ 93 (299)
...++.+++.+++|...|+++ +|+|||+||++.+... |...+.+.+ .++|+|+++|+||||+|+.+.
T Consensus 177 ~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~------W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~ 250 (481)
T PLN03087 177 CTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAF------WTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA 250 (481)
T ss_pred eeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHH------HHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC
Confidence 345677778899999999754 4799999999988743 643332333 369999999999999996432
Q ss_pred CCCCCcccHHHHHHHHH-HHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 94 SDDEPVLSVDDLADQIA-EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~-~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
...++++++++++. .+++.++.++++++||||||++++.+|.++|++|+++|+++++...................
T Consensus 251 ---~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~ 327 (481)
T PLN03087 251 ---DSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVA 327 (481)
T ss_pred ---CCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhc
Confidence 23489999999995 89999999999999999999999999999999999999999865432211110000000000
Q ss_pred HhhcchhHHHHHHHHhhhccccccC--CCCCchHHHHHHHHhhh-------------cccccchHHHHHh-hcC-----C
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGN--AQVPESDIVQACRRLLD-------------ERQSSNVWHFLEA-ING-----R 231 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~-~~~-----~ 231 (299)
................++....... .....+...+.+..... ..........+.. ... .
T Consensus 328 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~ 407 (481)
T PLN03087 328 PRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLD 407 (481)
T ss_pred ccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhh
Confidence 0000000000000011110000000 00000111111100000 0000001011110 100 0
Q ss_pred CChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHh-HHHHHHHHhhhh
Q 022316 232 PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLL-GFLVLLASFCES 297 (299)
Q Consensus 232 ~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~f~~~~~~~~~~ 297 (299)
..+....++|++|+|+|+|++|.++ +..+.+.+.+++ ++++++|++||.++. |-++.++..++.
T Consensus 408 ~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~--a~l~vI~~aGH~~~v~e~p~~fa~~L~~ 474 (481)
T PLN03087 408 GYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPR--ARVKVIDDKDHITIVVGRQKEFARELEE 474 (481)
T ss_pred hHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC--CEEEEeCCCCCcchhhcCHHHHHHHHHH
Confidence 1122234479999999999999997 666778888865 899999999999874 555555544443
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-32 Score=210.83 Aligned_cols=246 Identities=18% Similarity=0.270 Sum_probs=166.2
Q ss_pred eEEEEeccCC-CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHH
Q 022316 31 SLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (299)
Q Consensus 31 ~l~~~~~g~~-~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 109 (299)
+++|...|++ ++|+|||+||++.+... |. .+.+.+.++|+|+++|+||||.|..+ ...++++++++++
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~------~~-~~~~~l~~~~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~~ 69 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRM------WD-PVLPALTPDFRVLRYDKRGHGLSDAP----EGPYSIEDLADDV 69 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhh------HH-HHHHHhhcccEEEEecCCCCCCCCCC----CCCCCHHHHHHHH
Confidence 3678888865 67889999999887643 63 34566788999999999999998542 2357999999999
Q ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhh
Q 022316 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (299)
.++++.++.++++++||||||++++.+|.++|++|+++|++++.........+..... .. ...+..... ......+
T Consensus 70 ~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~-~~~~~~~ 145 (251)
T TIGR02427 70 LALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIA--AV-RAEGLAALA-DAVLERW 145 (251)
T ss_pred HHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHh--hh-hhccHHHHH-HHHHHHH
Confidence 9999999999999999999999999999999999999999997655433222221100 00 011111111 1222333
Q ss_pred hccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhcc
Q 022316 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKID 267 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~ 267 (299)
+....... .....+.+...........+......+.. .+....+.++++|+++++|++|.++ +....+.+.++
T Consensus 146 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 220 (251)
T TIGR02427 146 FTPGFREA----HPARLDLYRNMLVRQPPDGYAGCCAAIRD-ADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP 220 (251)
T ss_pred cccccccC----ChHHHHHHHHHHHhcCHHHHHHHHHHHhc-ccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC
Confidence 33222211 12222333333333222333333333322 4556678889999999999999998 55666666665
Q ss_pred ccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 268 RRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 268 ~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+ .++++++++||..+.+-.+.+...++.+
T Consensus 221 ~--~~~~~~~~~gH~~~~~~p~~~~~~i~~f 249 (251)
T TIGR02427 221 G--ARFAEIRGAGHIPCVEQPEAFNAALRDF 249 (251)
T ss_pred C--ceEEEECCCCCcccccChHHHHHHHHHH
Confidence 4 7899999999999988777777666554
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=211.76 Aligned_cols=250 Identities=12% Similarity=0.132 Sum_probs=151.3
Q ss_pred ceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHH
Q 022316 30 GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (299)
Q Consensus 30 ~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 109 (299)
.+++|...| ++|+|||+||++.+..... .+| ..+..++.++|+|+++|+||||+|+.... ....+ ..+++++
T Consensus 20 ~~~~y~~~g--~~~~ivllHG~~~~~~~~~--~~~-~~~~~l~~~~~~vi~~D~~G~G~S~~~~~--~~~~~-~~~~~~l 91 (282)
T TIGR03343 20 FRIHYNEAG--NGEAVIMLHGGGPGAGGWS--NYY-RNIGPFVDAGYRVILKDSPGFNKSDAVVM--DEQRG-LVNARAV 91 (282)
T ss_pred eeEEEEecC--CCCeEEEECCCCCchhhHH--HHH-HHHHHHHhCCCEEEEECCCCCCCCCCCcC--ccccc-chhHHHH
Confidence 468899888 5688999999987764311 112 33445556799999999999999964321 11122 2568999
Q ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHh--hcchhHHHHHHHH
Q 022316 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY--YGMCGVVKELLLK 187 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 187 (299)
.++++.++.++++++||||||.+++.+|.++|++|+++|++++...................... ....... .....
T Consensus 92 ~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 170 (282)
T TIGR03343 92 KGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETL-KQMLN 170 (282)
T ss_pred HHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHH-HHHHh
Confidence 99999999999999999999999999999999999999999976422110000000000000000 0001111 10111
Q ss_pred h-hhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHh----hcCCCChhhhhccccccEEEEecCCCcch--hhhH
Q 022316 188 R-YFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA----INGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 260 (299)
Q Consensus 188 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~ 260 (299)
. .+.... .+++..+......... +.....+... .....+....+++|++|+|+|+|++|.++ +.+.
T Consensus 171 ~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~ 243 (282)
T TIGR03343 171 VFLFDQSL------ITEELLQGRWENIQRQ-PEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGL 243 (282)
T ss_pred hCccCccc------CcHHHHHhHHHHhhcC-HHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHH
Confidence 1 111100 0122222111111110 1111111111 01123445668899999999999999997 5677
Q ss_pred HHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 261 HMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
++.+.+++ +++++++++||.+..|..+.++.-++.
T Consensus 244 ~~~~~~~~--~~~~~i~~agH~~~~e~p~~~~~~i~~ 278 (282)
T TIGR03343 244 KLLWNMPD--AQLHVFSRCGHWAQWEHADAFNRLVID 278 (282)
T ss_pred HHHHhCCC--CEEEEeCCCCcCCcccCHHHHHHHHHH
Confidence 77777754 899999999999998866666544443
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-31 Score=209.83 Aligned_cols=260 Identities=13% Similarity=0.094 Sum_probs=164.9
Q ss_pred CCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
...+++++++.+++|...|++++|+|||+||++.+... |. .+.+.+.++|+|+++|+||||.|+.+. ...
T Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~------~~-~~~~~l~~~~~vi~~D~~G~G~S~~~~---~~~ 75 (278)
T TIGR03056 6 DCSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHS------WR-DLMPPLARSFRVVAPDLPGHGFTRAPF---RFR 75 (278)
T ss_pred CccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHH------HH-HHHHHHhhCcEEEeecCCCCCCCCCcc---ccC
Confidence 34567788899999999997778999999999887754 53 345667788999999999999996432 234
Q ss_pred ccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch-hHHHHhhhhhhhHHhhcch
Q 022316 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSNLLYYYGMC 178 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 178 (299)
++++++++++.++++.+++++++|+||||||.+++.+|.++|++++++|++++....... ..+.. .............
T Consensus 76 ~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 154 (278)
T TIGR03056 76 FTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLF-PYMARVLACNPFT 154 (278)
T ss_pred CCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccccccc-chhhHhhhhcccc
Confidence 899999999999999999999999999999999999999999999999999876532110 00000 0000000000000
Q ss_pred hHHHHH------HHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcC--CCChhhhhccccccEEEEec
Q 022316 179 GVVKEL------LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING--RPDISEGLRKLQCRSLIFVG 250 (299)
Q Consensus 179 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~lii~G 250 (299)
...... ....++..... . ..+.....+...... ..........+.. .......++++++|+++|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g 228 (278)
T TIGR03056 155 PPMMSRGAADQQRVERLIRDTGS-L---LDKAGMTYYGRLIRS--PAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAG 228 (278)
T ss_pred hHHHHhhcccCcchhHHhhcccc-c---cccchhhHHHHhhcC--chhhhHHHHHhhcccccchhhhcccCCCCEEEEEe
Confidence 000000 00001100000 0 001111111111110 0111111111111 01234557889999999999
Q ss_pred CCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 251 ESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 251 ~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
++|.++ +..+.+.+.+++ +++++++++||..+.|..+.++.-++++
T Consensus 229 ~~D~~vp~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~f 276 (278)
T TIGR03056 229 EEDKAVPPDESKRAATRVPT--ATLHVVPGGGHLVHEEQADGVVGLILQA 276 (278)
T ss_pred CCCcccCHHHHHHHHHhccC--CeEEEECCCCCcccccCHHHHHHHHHHH
Confidence 999998 556666666654 7899999999999988777776665554
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-32 Score=212.17 Aligned_cols=241 Identities=14% Similarity=0.136 Sum_probs=148.0
Q ss_pred eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH
Q 022316 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (299)
Q Consensus 31 ~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~ 110 (299)
.++|...|. +.|+|||+||++.++.. |.+ +...|.+.|+|+++|+||||.|... ..++++++++++.
T Consensus 3 ~~~y~~~G~-g~~~ivllHG~~~~~~~------w~~-~~~~L~~~~~vi~~Dl~G~G~S~~~-----~~~~~~~~~~~l~ 69 (256)
T PRK10349 3 NIWWQTKGQ-GNVHLVLLHGWGLNAEV------WRC-IDEELSSHFTLHLVDLPGFGRSRGF-----GALSLADMAEAVL 69 (256)
T ss_pred ccchhhcCC-CCCeEEEECCCCCChhH------HHH-HHHHHhcCCEEEEecCCCCCCCCCC-----CCCCHHHHHHHHH
Confidence 367888883 33469999999988855 744 4666788899999999999999632 2368888887765
Q ss_pred HHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH--hhhhhhhHHhhcchhHHHHHHHHh
Q 022316 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY--NKVMSNLLYYYGMCGVVKELLLKR 188 (299)
Q Consensus 111 ~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 188 (299)
+ +..++++++||||||.+++.+|.++|++|+++|++++.+.......+.. .......... ..... ......
T Consensus 70 ~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~ 142 (256)
T PRK10349 70 Q----QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQ--LSDDF-QRTVER 142 (256)
T ss_pred h----cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHH--HHhch-HHHHHH
Confidence 4 4568999999999999999999999999999999998654321100000 0000000000 00000 011122
Q ss_pred hhccccccCCCCCchHHHHHHHHhhhcccccc---hHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHh
Q 022316 189 YFSKEVRGNAQVPESDIVQACRRLLDERQSSN---VWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMT 263 (299)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~ 263 (299)
++........ . .......+........... .......+ ...+..+.+.++++|+|+|+|++|.++ +.+..+.
T Consensus 143 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 219 (256)
T PRK10349 143 FLALQTMGTE-T-ARQDARALKKTVLALPMPEVDVLNGGLEIL-KTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLD 219 (256)
T ss_pred HHHHHHccCc-h-HHHHHHHHHHHhhccCCCcHHHHHHHHHHH-HhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHH
Confidence 2211110000 0 0111111122111111111 11111222 224666788999999999999999987 4555666
Q ss_pred hhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 264 SKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 264 ~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
+.+++ ++++++|++||.++.|-++.++.-+.
T Consensus 220 ~~i~~--~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 220 KLWPH--SESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred HhCCC--CeEEEeCCCCCCccccCHHHHHHHHH
Confidence 66654 89999999999999887776664443
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-31 Score=206.50 Aligned_cols=232 Identities=17% Similarity=0.132 Sum_probs=144.0
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcE
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 121 (299)
+|+|||+||++.++.. |.+. .+.+ ++|+|+++|+||||.|..+. ..+++++++++.++++.++++++
T Consensus 2 ~p~vvllHG~~~~~~~------w~~~-~~~l-~~~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~l~~~l~~~~~~~~ 68 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD------WQPV-GEAL-PDYPRLYIDLPGHGGSAAIS-----VDGFADVSRLLSQTLQSYNILPY 68 (242)
T ss_pred CCEEEEECCCCCChHH------HHHH-HHHc-CCCCEEEecCCCCCCCCCcc-----ccCHHHHHHHHHHHHHHcCCCCe
Confidence 5789999999998855 7444 4556 47999999999999996432 25899999999999999999999
Q ss_pred EEEeeCccHHHHHHHHHHccCc-ccEEEEecCCCCCcchhHHHHhhhhh-hhHHhhcchhHHHHHHHHhhhccccccCCC
Q 022316 122 MCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCKAPSWTEWLYNKVMS-NLLYYYGMCGVVKELLLKRYFSKEVRGNAQ 199 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (299)
+++||||||.+|+.+|.++|++ |++++++++.+............... ........ ... ......++........
T Consensus 69 ~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~- 145 (242)
T PRK11126 69 WLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQ-EPL-EQVLADWYQQPVFASL- 145 (242)
T ss_pred EEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhcc-CcH-HHHHHHHHhcchhhcc-
Confidence 9999999999999999999765 99999998766443222111000000 00000000 000 1122222221111110
Q ss_pred CCchHHHHHHHHhhhcccccchHHHHHhh--cCCCChhhhhccccccEEEEecCCCcchhhhHHHhhhccccCceEEEEc
Q 022316 200 VPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVW 277 (299)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~ 277 (299)
.++....+................... ..+.+..+.+.+++||+++|+|++|..+.. +.+.. ++++++++
T Consensus 146 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~---~~~~~---~~~~~~i~ 217 (242)
T PRK11126 146 --NAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQA---LAQQL---ALPLHVIP 217 (242)
T ss_pred --CccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHHH---HHHHh---cCeEEEeC
Confidence 122222221111111111122222211 122456677889999999999999987631 22221 48899999
Q ss_pred CchhhhHhHHHHHHHHhhhh
Q 022316 278 TRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 278 ~~~H~~~~~f~~~~~~~~~~ 297 (299)
++||.++.|-++.++..+.+
T Consensus 218 ~~gH~~~~e~p~~~~~~i~~ 237 (242)
T PRK11126 218 NAGHNAHRENPAAFAASLAQ 237 (242)
T ss_pred CCCCchhhhChHHHHHHHHH
Confidence 99999999877666654443
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-31 Score=202.52 Aligned_cols=270 Identities=18% Similarity=0.214 Sum_probs=167.7
Q ss_pred CCCCcceeecCCc-eEEEEecc--CCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSHG-SLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (299)
Q Consensus 18 ~~~~~~~i~~~~~-~l~~~~~g--~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~ 94 (299)
.+...+.+.+.++ .+...... ..+++++||+||+|.+... |...+ .-|++.++|+++|+||+|+|..+.-
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~------f~~Nf-~~La~~~~vyaiDllG~G~SSRP~F 135 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGL------FFRNF-DDLAKIRNVYAIDLLGFGRSSRPKF 135 (365)
T ss_pred CCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHH------HHHhh-hhhhhcCceEEecccCCCCCCCCCC
Confidence 3444455555443 33222222 2467789999999988744 54553 4456699999999999999987655
Q ss_pred CCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch----------hHHHH
Q 022316 95 DDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW----------TEWLY 164 (299)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~----------~~~~~ 164 (299)
+.........+++-++++....++++.+|+||||||++|..||.+||++|+.|||++|....... ..|..
T Consensus 136 ~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~ 215 (365)
T KOG4409|consen 136 SIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYK 215 (365)
T ss_pred CCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHh
Confidence 44455666789999999999999999999999999999999999999999999999998765421 11220
Q ss_pred h-------hhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhc----CCCC
Q 022316 165 N-------KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN----GRPD 233 (299)
Q Consensus 165 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 233 (299)
. -....+++..|. +. ..++.++....+..-.....++.+-.|.-......+.+...+-..+. .+..
T Consensus 216 ~~~~~~~~~nPl~~LR~~Gp--~G-p~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~P 292 (365)
T KOG4409|consen 216 ALFLVATNFNPLALLRLMGP--LG-PKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRP 292 (365)
T ss_pred hhhhhhhcCCHHHHHHhccc--cc-hHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhh
Confidence 0 000011111111 00 11222221111111100012333233333233333333222222211 1234
Q ss_pred hhhhhcccc--ccEEEEecCCCcch-hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 234 ISEGLRKLQ--CRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 234 ~~~~~~~i~--~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
+.+.+..++ ||+++|+|++|.+- ....++...+...+++.+++|++||.+.++-++.+++.+.+
T Consensus 293 m~~r~~~l~~~~pv~fiyG~~dWmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~ 359 (365)
T KOG4409|consen 293 MIQRLRELKKDVPVTFIYGDRDWMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLE 359 (365)
T ss_pred HHHHHHhhccCCCEEEEecCcccccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHH
Confidence 445566665 99999999999985 55666666555567999999999999999877666655443
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-30 Score=213.19 Aligned_cols=259 Identities=11% Similarity=0.021 Sum_probs=161.8
Q ss_pred eeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHH
Q 022316 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 103 (299)
.+..++.+++|...|+.++|+|||+||++.+... |.. +...|.++|+|+++|+||||.|+.+.......++++
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~------w~~-~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~ 181 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYS------YRK-VLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLD 181 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHH------HHH-HHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHH
Confidence 3455667999999997778999999999988755 744 456677899999999999999975432212358999
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcc--hhHHHHhhhhhhhHHhhcchhHH
Q 022316 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS--WTEWLYNKVMSNLLYYYGMCGVV 181 (299)
Q Consensus 104 ~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 181 (299)
++++++.++++++++++++|+|||+||++++.+|.++|++|+++|+++++..... ..... ..+...+.........
T Consensus 182 ~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l--~~~~~~l~~~~~~~~~ 259 (383)
T PLN03084 182 EYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTL--SEFSNFLLGEIFSQDP 259 (383)
T ss_pred HHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHH--HHHHHHHhhhhhhcch
Confidence 9999999999999999999999999999999999999999999999998754321 01100 0000000000000000
Q ss_pred HHHHHHhhhccccccCCCCCchHHHHHHHHhhhccccc--chHHHHHhhcCC-CC----hhhhh--ccccccEEEEecCC
Q 022316 182 KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSS--NVWHFLEAINGR-PD----ISEGL--RKLQCRSLIFVGES 252 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~----~~~~~--~~i~~P~lii~G~~ 252 (299)
.......+....... ..++....+...+...... ......+.+... .. ....+ .++++|+++|+|++
T Consensus 260 -~~~~~~~~~~~~~~~---~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~ 335 (383)
T PLN03084 260 -LRASDKALTSCGPYA---MKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLR 335 (383)
T ss_pred -HHHHhhhhcccCccC---CCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCC
Confidence 000001111000000 0122222222211111100 111111222110 01 11111 36899999999999
Q ss_pred Ccch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 253 SPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 253 D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
|.++ +..+++.+.. +.+++++|++||.+..|.++.++..+..+
T Consensus 336 D~~v~~~~~~~~a~~~---~a~l~vIp~aGH~~~~E~Pe~v~~~I~~F 380 (383)
T PLN03084 336 DRWLNYDGVEDFCKSS---QHKLIELPMAGHHVQEDCGEELGGIISGI 380 (383)
T ss_pred CCCcCHHHHHHHHHhc---CCeEEEECCCCCCcchhCHHHHHHHHHHH
Confidence 9987 4455555542 37899999999999999988888766654
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=215.23 Aligned_cols=267 Identities=12% Similarity=0.118 Sum_probs=158.6
Q ss_pred ceeecCCceEEEEeccC-CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC--CCCc
Q 022316 23 NLIKTSHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD--DEPV 99 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~-~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~--~~~~ 99 (299)
.++..++.+++|..+++ ..+++||++||++.+... |...+..++..||+|+++|+||||.|..+... ....
T Consensus 34 ~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~------y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 34 EFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVK------YAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred EEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHH------HHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 34555677899999875 356789999999776533 43444456678999999999999999653221 1223
Q ss_pred ccHHHHHHHHHHHHHhc----CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch-hHHHHhhhhhhhHHh
Q 022316 100 LSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSNLLYY 174 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~ 174 (299)
.+++++++|+..+++.+ +..+++++||||||.+++.+|.++|++|+++|+++|....... ........ ......
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~-~~~~~~ 186 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRI-LNWAEG 186 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHH-HHHHHH
Confidence 58999999999999876 6689999999999999999999999999999999987543211 11110000 000000
Q ss_pred h-cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccc-----cchHHHHHhhcCCCChhhhhccccccEEEE
Q 022316 175 Y-GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS-----SNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (299)
Q Consensus 175 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 248 (299)
. ...... ......+.............++....+.+.....+. ..+......+.........+.++++|+|+|
T Consensus 187 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii 265 (330)
T PRK10749 187 HPRIRDGY-AIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLL 265 (330)
T ss_pred hcCCCCcC-CCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEE
Confidence 0 000000 000000100000000000012222222222222211 111111111111112335578899999999
Q ss_pred ecCCCcch--hhhHHHhhhccc-----cCceEEEEcCchhhhHhH-------HHHHHHHhhhh
Q 022316 249 VGESSPFH--SEAVHMTSKIDR-----RYSALVEVWTRVYISLLG-------FLVLLASFCES 297 (299)
Q Consensus 249 ~G~~D~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~H~~~~~-------f~~~~~~~~~~ 297 (299)
+|++|.++ +.++.+.+.++. ..++++++|+++|.++.| .++.+..|+++
T Consensus 266 ~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 266 QAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred EeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 99999998 555666665531 336899999999998864 44556677765
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=9e-31 Score=206.12 Aligned_cols=237 Identities=11% Similarity=0.058 Sum_probs=145.0
Q ss_pred EEEEecc---CCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHH
Q 022316 32 LSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (299)
Q Consensus 32 l~~~~~g---~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 108 (299)
++|+.++ ++++|+|||+||++.+... | ..+...+.++|+|+++|+||||.|..+ ..++++++++|
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~~------~-~~~~~~l~~~~~vi~~D~~G~G~s~~~-----~~~~~~~~~~d 70 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLDN------L-GVLARDLVNDHDIIQVDMRNHGLSPRD-----PVMNYPAMAQD 70 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchhH------H-HHHHHHHhhCCeEEEECCCCCCCCCCC-----CCCCHHHHHHH
Confidence 4566543 2467899999999888644 5 344566788999999999999999642 24799999999
Q ss_pred HHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH-HHHhhhhhhhHHhhcchhHHHHHHHH
Q 022316 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-WLYNKVMSNLLYYYGMCGVVKELLLK 187 (299)
Q Consensus 109 l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (299)
+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.+....... ......+... ...+..... ...
T Consensus 71 ~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~ 146 (255)
T PRK10673 71 LLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAV-SEAGATTRQ---QAA 146 (255)
T ss_pred HHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHh-hhcccccHH---HHH
Confidence 99999999999999999999999999999999999999999986543321100 0000000000 000100000 000
Q ss_pred hhhccccccCCCCCchHHHHHHHHhhhcccc-cchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhh
Q 022316 188 RYFSKEVRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 264 (299)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~ 264 (299)
..+.... . ...........+..... ......+..+.. ......++++++|+|+|+|++|..+ +..+.+.+
T Consensus 147 ~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~ 219 (255)
T PRK10673 147 AIMRQHL--N----EEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLA 219 (255)
T ss_pred HHHHHhc--C----CHHHHHHHHhcCCcceeEeeHHHHHHhHHH-HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHH
Confidence 0000000 0 01111111111111000 000000111100 0112345678999999999999987 55666666
Q ss_pred hccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 265 KIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 265 ~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
.++. +++++++++||.+..+..+.++.
T Consensus 220 ~~~~--~~~~~~~~~gH~~~~~~p~~~~~ 246 (255)
T PRK10673 220 QFPQ--ARAHVIAGAGHWVHAEKPDAVLR 246 (255)
T ss_pred hCCC--cEEEEeCCCCCeeeccCHHHHHH
Confidence 6654 88999999999988865554443
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-30 Score=212.52 Aligned_cols=263 Identities=12% Similarity=0.122 Sum_probs=151.3
Q ss_pred ecCCceEEEEeccCC---CCCeEEEecccccchhhhccccccCchhh--hcc-cCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 26 KTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEAC--SLL-LHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 26 ~~~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~~~~w~~~~~--~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
..++.+++|...|+. +.|+||++||++.++.. |...+. ..+ .++|+||++|+||||.|..+... ...
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~------~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~ 94 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQD------NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNT-PAP 94 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCccc------chhhccCCCccCcCceEEEEecCCCCCCCCCCCCC-CCC
Confidence 345668999999963 33566666666655422 322111 244 46899999999999999643211 012
Q ss_pred ccHHH-----HHHHHHH----HHHhcCCCcE-EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhh
Q 022316 100 LSVDD-----LADQIAE----VLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (299)
Q Consensus 100 ~~~~~-----~~~~l~~----~l~~l~~~~~-~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (299)
+++++ +++++.+ ++++++++++ +||||||||++|+.+|.++|++|+++|++++.................
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~ 174 (339)
T PRK07581 95 FNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKA 174 (339)
T ss_pred CCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHH
Confidence 33332 4555544 7788999995 799999999999999999999999999999876543322211110000
Q ss_pred hhHH-------------hhcchhHHHHHHHHhhhccccccC-----CCCCc-hHHHHH-HHHhhhcccccchHHHHHhhc
Q 022316 170 NLLY-------------YYGMCGVVKELLLKRYFSKEVRGN-----AQVPE-SDIVQA-CRRLLDERQSSNVWHFLEAIN 229 (299)
Q Consensus 170 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 229 (299)
.... ..+..... .......+...+... ..... ++.... +.......++..+...+..+.
T Consensus 175 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 253 (339)
T PRK07581 175 ALTADPAFNGGWYAEPPERGLRAHA-RVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQ 253 (339)
T ss_pred HHHhCCCCCCCCCCCcHHHHHHHHH-HHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhh
Confidence 0000 00000000 001111111111100 00000 122222 222222223334444322111
Q ss_pred -----C----CCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcC-chhhhHhH----HHHHHHH
Q 022316 230 -----G----RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWT-RVYISLLG----FLVLLAS 293 (299)
Q Consensus 230 -----~----~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~----f~~~~~~ 293 (299)
. ..+....+++|++|||+|+|++|.++ +..+.+.+.+++ ++++++++ +||....+ |...+.+
T Consensus 254 ~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~--a~l~~i~~~~GH~~~~~~~~~~~~~~~~ 331 (339)
T PRK07581 254 RGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN--AELRPIESIWGHLAGFGQNPADIAFIDA 331 (339)
T ss_pred hcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CeEEEeCCCCCccccccCcHHHHHHHHH
Confidence 1 12566778999999999999999987 566677777765 88999999 99988875 5555556
Q ss_pred hhhhc
Q 022316 294 FCESE 298 (299)
Q Consensus 294 ~~~~~ 298 (299)
|++..
T Consensus 332 ~~~~~ 336 (339)
T PRK07581 332 ALKEL 336 (339)
T ss_pred HHHHH
Confidence 66543
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-30 Score=211.10 Aligned_cols=252 Identities=14% Similarity=0.166 Sum_probs=158.3
Q ss_pred ceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccH
Q 022316 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (299)
..+..++.+++|...| ++|+|||+||++.+... |... .+.+.++|+|+++|+||||.|+.+. ..++.
T Consensus 69 ~~~~~~~~~i~Y~~~g--~g~~vvliHG~~~~~~~------w~~~-~~~l~~~~~v~~~D~~G~G~S~~~~----~~~~~ 135 (354)
T PLN02578 69 NFWTWRGHKIHYVVQG--EGLPIVLIHGFGASAFH------WRYN-IPELAKKYKVYALDLLGFGWSDKAL----IEYDA 135 (354)
T ss_pred eEEEECCEEEEEEEcC--CCCeEEEECCCCCCHHH------HHHH-HHHHhcCCEEEEECCCCCCCCCCcc----cccCH
Confidence 4456678899999988 56889999999887644 6443 5667788999999999999997532 24899
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH-----------HHHh---hhh
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-----------WLYN---KVM 168 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----------~~~~---~~~ 168 (299)
+++++++.++++.+..++++++||||||++++.+|.++|++|+++|+++++........ .... ...
T Consensus 136 ~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (354)
T PLN02578 136 MVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPL 215 (354)
T ss_pred HHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHH
Confidence 99999999999999989999999999999999999999999999999987654321100 0000 000
Q ss_pred hhhHHhh---------cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhc---CCCChh
Q 022316 169 SNLLYYY---------GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAIN---GRPDIS 235 (299)
Q Consensus 169 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~ 235 (299)
...+... ...... .......+.... ..++...+.+....... ....+...+..+. ...+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T PLN02578 216 KEWFQRVVLGFLFWQAKQPSRI-ESVLKSVYKDKS-----NVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLD 289 (354)
T ss_pred HHHHHHHHHHHHHHHhcCHHHH-HHHHHHhcCCcc-----cCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHH
Confidence 0000000 000000 000011111000 00111122111101000 1111222222111 123455
Q ss_pred hhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 236 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 236 ~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
+.++++++|+++|+|++|.++ +.+..+.+.+++ .+++++ ++||.+..|-+++++.-+.
T Consensus 290 ~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~--a~l~~i-~~GH~~~~e~p~~~~~~I~ 349 (354)
T PLN02578 290 SLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPD--TTLVNL-QAGHCPHDEVPEQVNKALL 349 (354)
T ss_pred HHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEe-CCCCCccccCHHHHHHHHH
Confidence 678899999999999999987 566667777755 778888 6999988876666554443
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=204.38 Aligned_cols=226 Identities=11% Similarity=0.089 Sum_probs=140.7
Q ss_pred eEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC-CcE
Q 022316 44 ALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-GAV 121 (299)
Q Consensus 44 ~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~ 121 (299)
+|||+||++.+... |... .+.| ..+|+|+++|+||||.|..+. ...++++++++|+.++++.++. +++
T Consensus 5 ~vvllHG~~~~~~~------w~~~-~~~L~~~~~~via~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~~~~ 74 (255)
T PLN02965 5 HFVFVHGASHGAWC------WYKL-ATLLDAAGFKSTCVDLTGAGISLTDS---NTVSSSDQYNRPLFALLSDLPPDHKV 74 (255)
T ss_pred EEEEECCCCCCcCc------HHHH-HHHHhhCCceEEEecCCcCCCCCCCc---cccCCHHHHHHHHHHHHHhcCCCCCE
Confidence 59999999977633 7544 4555 679999999999999996432 1247899999999999999987 499
Q ss_pred EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcc---hhHHHH-hhhhhhhHHh---hcc-hh----HHHHHHHHhh
Q 022316 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWLY-NKVMSNLLYY---YGM-CG----VVKELLLKRY 189 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~-~~~~~~~~~~---~~~-~~----~~~~~~~~~~ 189 (299)
+|+||||||.+++.+|.++|++|+++|++++....+. ...+.. .......... ... .. ..........
T Consensus 75 ~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T PLN02965 75 ILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHY 154 (255)
T ss_pred EEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHH
Confidence 9999999999999999999999999999998643221 111100 0000000000 000 00 0000000011
Q ss_pred -hccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhc
Q 022316 190 -FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKI 266 (299)
Q Consensus 190 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~ 266 (299)
+... ..+........+.......+. .. .+....+.++++|+++|+|++|.++ +..+.+.+.+
T Consensus 155 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~ 219 (255)
T PLN02965 155 YYNQS--------PLEDYTLSSKLLRPAPVRAFQ----DL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW 219 (255)
T ss_pred HhcCC--------CHHHHHHHHHhcCCCCCcchh----hh---hhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC
Confidence 1100 011111111111111111110 00 1122345679999999999999998 5677778888
Q ss_pred cccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 267 DRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 267 ~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
++ +++++++++||.++.|-++.++..+.
T Consensus 220 ~~--a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 220 PP--AQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred Cc--ceEEEecCCCCchhhcCHHHHHHHHH
Confidence 66 78999999999999987666654443
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=203.26 Aligned_cols=247 Identities=15% Similarity=0.205 Sum_probs=154.3
Q ss_pred EEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHH
Q 022316 32 LSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (299)
Q Consensus 32 l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 109 (299)
++|..+|+ .++|+|||+||++.++.. |. ...+.+.++|+|+++|+||||.|..+. ...++++++++++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~------~~-~~~~~l~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~~ 70 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSY------WA-PQLDVLTQRFHVVTYDHRGTGRSPGEL---PPGYSIAHMADDV 70 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhH------HH-HHHHHHHhccEEEEEcCCCCCCCCCCC---cccCCHHHHHHHH
Confidence 46778886 457899999999888633 63 345667789999999999999996532 2458999999999
Q ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhh
Q 022316 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (299)
.++++.++.++++++||||||.+++.+|.++|++|+++|++++............... ...+......... .......
T Consensus 71 ~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~ 148 (257)
T TIGR03611 71 LQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVR-IALLQHAGPEAYV-HAQALFL 148 (257)
T ss_pred HHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHH-HHHHhccCcchhh-hhhhhhh
Confidence 9999999999999999999999999999999999999999998655432111100000 0110111111110 0000000
Q ss_pred hccccccCCCCCchHHHHHHHHhhhc-ccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhc
Q 022316 190 FSKEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKI 266 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~ 266 (299)
+........ .+............ ............+.. .+....++++++|+++++|++|.++ +.+.++.+.+
T Consensus 149 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 224 (257)
T TIGR03611 149 YPADWISEN---AARLAADEAHALAHFPGKANVLRRINALEA-FDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL 224 (257)
T ss_pred ccccHhhcc---chhhhhhhhhcccccCccHHHHHHHHHHHc-CCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc
Confidence 000000000 00000000000110 011112222222222 3455678889999999999999998 5666777777
Q ss_pred cccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 267 DRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 267 ~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
+. .+++.++++||....+-.+.++..+.
T Consensus 225 ~~--~~~~~~~~~gH~~~~~~~~~~~~~i~ 252 (257)
T TIGR03611 225 PN--AQLKLLPYGGHASNVTDPETFNRALL 252 (257)
T ss_pred CC--ceEEEECCCCCCccccCHHHHHHHHH
Confidence 54 78899999999988765555544443
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=208.93 Aligned_cols=262 Identities=13% Similarity=0.090 Sum_probs=153.1
Q ss_pred eeecCCceEEEEeccCCCCCeEEEecccccchhhhc------cccccCchhh--hcc-cCceEEEEECCCCCCCCCCCCC
Q 022316 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCF------QGLFFCPEAC--SLL-LHNFCIYHINPPGHEFGAAAIS 94 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~------~~~~w~~~~~--~~l-~~~~~vi~~D~~G~G~S~~~~~ 94 (299)
..++++.+++|...|+++. ++||+||++.++.... ...+|.+.+. +.| .++|+||++|+||||.|..
T Consensus 40 ~~~~~~~~l~y~~~G~~~~-p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~--- 115 (343)
T PRK08775 40 HAGLEDLRLRYELIGPAGA-PVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD--- 115 (343)
T ss_pred CCCCCCceEEEEEeccCCC-CEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---
Confidence 3445677899999995334 4677766655543210 0124755543 134 5789999999999997732
Q ss_pred CCCCcccHHHHHHHHHHHHHhcCCCcE-EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH-HHHhhhhhhhH
Q 022316 95 DDEPVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-WLYNKVMSNLL 172 (299)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l~~~~~-~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~ 172 (299)
..++++++++|+.+++++++++++ +|+||||||+||+.+|.++|++|+++|++++......... +..........
T Consensus 116 ---~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~ 192 (343)
T PRK08775 116 ---VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVAL 192 (343)
T ss_pred ---CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHc
Confidence 136889999999999999999775 7999999999999999999999999999998765432211 11100000000
Q ss_pred H-hhcch----hHHHHHH---------HHhhhccccccCCCCCchHHHHHHH----HhhhcccccchHHHHHhhcCCCCh
Q 022316 173 Y-YYGMC----GVVKELL---------LKRYFSKEVRGNAQVPESDIVQACR----RLLDERQSSNVWHFLEAINGRPDI 234 (299)
Q Consensus 173 ~-~~~~~----~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
. ..+.. ....... ....+.................... ..........+......... .
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~ 269 (343)
T PRK08775 193 GQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL---H 269 (343)
T ss_pred CCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh---c
Confidence 0 00000 0000000 0011111100000000011111111 11222223333333322211 1
Q ss_pred hhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcC-chhhhHhHHHHHHHHhhh
Q 022316 235 SEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWT-RVYISLLGFLVLLASFCE 296 (299)
Q Consensus 235 ~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~f~~~~~~~~~ 296 (299)
...+.+|++|+|+|+|++|.++ +..+++.+.++. +++++++++ +||.+++|-++.++..++
T Consensus 270 ~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p-~a~l~~i~~~aGH~~~lE~Pe~~~~~l~ 333 (343)
T PRK08775 270 RVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGP-RGSLRVLRSPYGHDAFLKETDRIDAILT 333 (343)
T ss_pred CCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC-CCeEEEEeCCccHHHHhcCHHHHHHHHH
Confidence 1236789999999999999987 567777777742 288999985 999999886666554443
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-31 Score=215.00 Aligned_cols=254 Identities=16% Similarity=0.156 Sum_probs=153.4
Q ss_pred eecCCceEEEEeccCC---CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 25 IKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 25 i~~~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
+..++.+|+|..++++ .+++|||+||++.+.. .+| ..+...+ ..||+|+++|+||||.|+.+. ....
T Consensus 67 ~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~-----~~~-~~~~~~l~~~g~~v~~~D~~G~G~S~~~~---~~~~ 137 (349)
T PLN02385 67 VNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCT-----FFF-EGIARKIASSGYGVFAMDYPGFGLSEGLH---GYIP 137 (349)
T ss_pred EcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccc-----hHH-HHHHHHHHhCCCEEEEecCCCCCCCCCCC---CCcC
Confidence 3446668999888763 3568999999987642 224 3334444 469999999999999996432 1235
Q ss_pred cHHHHHHHHHHHHHhcCC------CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch--hHHHHhhhhhhhH
Q 022316 101 SVDDLADQIAEVLNHFGL------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW--TEWLYNKVMSNLL 172 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~------~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~ 172 (299)
+++++++|+.++++.+.. .+++|+||||||++++.+|.++|++|+++|+++|....... ..+.........
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~- 216 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILL- 216 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHH-
Confidence 899999999999887754 27999999999999999999999999999999987643211 001000000000
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhh--cccccchHHHHHhhcCCCChhhhhccccccEEEEec
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLD--ERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 250 (299)
... .... .......+..... ............. ......+......+....+....+.++++|+|+|+|
T Consensus 217 ~~~-~p~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G 287 (349)
T PLN02385 217 ANL-LPKA--KLVPQKDLAELAF------RDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHG 287 (349)
T ss_pred HHH-CCCc--eecCCCccccccc------cCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEe
Confidence 000 0000 0000000000000 0000000111000 001111222222221112345567889999999999
Q ss_pred CCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhH--------HHHHHHHhhhh
Q 022316 251 ESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLG--------FLVLLASFCES 297 (299)
Q Consensus 251 ~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--------f~~~~~~~~~~ 297 (299)
++|.++ +.++.+.+.+...+.+++++|++||.++.| +++.+.+|+++
T Consensus 288 ~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~ 344 (349)
T PLN02385 288 EADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDS 344 (349)
T ss_pred CCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHH
Confidence 999998 567777787755558899999999998754 34445666654
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-30 Score=210.10 Aligned_cols=268 Identities=13% Similarity=0.119 Sum_probs=162.1
Q ss_pred ecCCceEEEEeccCC---CCCeEEEecccccchhhhc-------cccccCchhh---hcccCceEEEEECCCCC-CCCCC
Q 022316 26 KTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCF-------QGLFFCPEAC---SLLLHNFCIYHINPPGH-EFGAA 91 (299)
Q Consensus 26 ~~~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~-------~~~~w~~~~~---~~l~~~~~vi~~D~~G~-G~S~~ 91 (299)
..++.+++|..+|++ .+|+|||+||++.++.... ...+|...+. .++.++|+||++|+||+ |.|..
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 345668999999953 3689999999999886421 1123644432 45578999999999993 44432
Q ss_pred CC---CC-------CCCcccHHHHHHHHHHHHHhcCCCc-EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh
Q 022316 92 AI---SD-------DEPVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (299)
Q Consensus 92 ~~---~~-------~~~~~~~~~~~~~l~~~l~~l~~~~-~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (299)
+. +. ....++++++++++.++++++++++ ++++||||||++++.+|.++|++|+++|++++........
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 188 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQN 188 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHH
Confidence 21 00 1125899999999999999999999 5899999999999999999999999999999877654321
Q ss_pred H-HHH--hhhhhhh--HH-----hhcchhH----H----------HHHHHHhhhccccccCCC---CCchHHHHHHH---
Q 022316 161 E-WLY--NKVMSNL--LY-----YYGMCGV----V----------KELLLKRYFSKEVRGNAQ---VPESDIVQACR--- 210 (299)
Q Consensus 161 ~-~~~--~~~~~~~--~~-----~~~~~~~----~----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--- 210 (299)
. +.. ...+... +. ..+.... . ....+...|......... .......+.+.
T Consensus 189 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 268 (379)
T PRK00175 189 IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQ 268 (379)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHH
Confidence 1 110 0000000 00 0000000 0 000111222222111100 00001111111
Q ss_pred --HhhhcccccchHHHHHhhcCC-------CChhhhhccccccEEEEecCCCcch--hhhHHHhhhcccc--CceEEEEc
Q 022316 211 --RLLDERQSSNVWHFLEAINGR-------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVW 277 (299)
Q Consensus 211 --~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~--~~~~~~~~ 277 (299)
......+...+......+... .++.+.+++|++|+|+|+|++|.++ +..+++.+.+++. .+++++++
T Consensus 269 ~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~ 348 (379)
T PRK00175 269 GDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEID 348 (379)
T ss_pred HHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 112223333333333222110 2467789999999999999999987 6677788888652 13677785
Q ss_pred -CchhhhHhHHHHHHHH
Q 022316 278 -TRVYISLLGFLVLLAS 293 (299)
Q Consensus 278 -~~~H~~~~~f~~~~~~ 293 (299)
++||.+++|-++.++.
T Consensus 349 ~~~GH~~~le~p~~~~~ 365 (379)
T PRK00175 349 SPYGHDAFLLDDPRYGR 365 (379)
T ss_pred CCCCchhHhcCHHHHHH
Confidence 8999999976655543
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-30 Score=208.56 Aligned_cols=271 Identities=13% Similarity=0.159 Sum_probs=164.2
Q ss_pred ecCCceEEEEeccC---CCCCeEEEecccccchhhh-----ccccccCchh---hhcccCceEEEEECCCC--CCCCCCC
Q 022316 26 KTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSC-----FQGLFFCPEA---CSLLLHNFCIYHINPPG--HEFGAAA 92 (299)
Q Consensus 26 ~~~~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~-----~~~~~w~~~~---~~~l~~~~~vi~~D~~G--~G~S~~~ 92 (299)
..++.+|+|..+|+ ..+|+|||+||++.++... ....+|...+ ..++.++|+|+++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 34667899999995 3467999999999976431 0112464443 25557899999999999 5655321
Q ss_pred C--CC------CCCcccHHHHHHHHHHHHHhcCCCc-EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH-H
Q 022316 93 I--SD------DEPVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-W 162 (299)
Q Consensus 93 ~--~~------~~~~~~~~~~~~~l~~~l~~l~~~~-~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~ 162 (299)
. +. ....++++++++++..+++++++++ ++|+||||||++++.+|.++|++|+++|++++.+....+.. +
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAF 171 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHH
Confidence 0 11 1235899999999999999999999 99999999999999999999999999999999876554321 1
Q ss_pred HHhhhhhhhHHhh----------------cch--hHH------HHHHHHhhhccccccC-CCC---CchHHHHHHH----
Q 022316 163 LYNKVMSNLLYYY----------------GMC--GVV------KELLLKRYFSKEVRGN-AQV---PESDIVQACR---- 210 (299)
Q Consensus 163 ~~~~~~~~~~~~~----------------~~~--~~~------~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~---- 210 (299)
.. .....+... +.. ... ....+...|....... .+. ......+.+.
T Consensus 172 ~~--~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
T TIGR01392 172 NE--VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQG 249 (351)
T ss_pred HH--HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHH
Confidence 11 000000000 000 000 0001112222111100 000 0000111111
Q ss_pred -HhhhcccccchHHHHHhhcC------CCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCc--eEE-EEcC
Q 022316 211 -RLLDERQSSNVWHFLEAING------RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYS--ALV-EVWT 278 (299)
Q Consensus 211 -~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~--~~~-~~~~ 278 (299)
......+...+......+.. ..++.+.+++|++|+|+|+|++|.++ +.++.+.+.+++... +++ ++++
T Consensus 250 ~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~ 329 (351)
T TIGR01392 250 DKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESP 329 (351)
T ss_pred HHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCC
Confidence 12222233333333323221 12456789999999999999999986 667778888865322 222 4578
Q ss_pred chhhhHhHHHHHHHHhhhhc
Q 022316 279 RVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 279 ~~H~~~~~f~~~~~~~~~~~ 298 (299)
+||.++++-++.++..+.++
T Consensus 330 ~GH~~~le~p~~~~~~l~~F 349 (351)
T TIGR01392 330 YGHDAFLVETDQVEELIRGF 349 (351)
T ss_pred CCcchhhcCHHHHHHHHHHH
Confidence 99999998777766555543
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-29 Score=198.94 Aligned_cols=263 Identities=16% Similarity=0.197 Sum_probs=159.5
Q ss_pred ceeecCCceEEEEeccCC-CCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 23 NLIKTSHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~-~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
..++.+++++.|...+.+ .+++|||+||++++... +| ..+..++.+ ||+|+++|+||||.|..+.. ....+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~-----~~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~ 77 (288)
T TIGR01250 5 GIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHE-----YL-ENLRELLKEEGREVIMYDQLGCGYSDQPDD-SDELW 77 (288)
T ss_pred ceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHH-----HH-HHHHHHHHhcCCEEEEEcCCCCCCCCCCCc-ccccc
Confidence 356778888989888754 36889999998665433 23 445566665 89999999999999864321 11137
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHh--hhhh----hhHHh
Q 022316 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN--KVMS----NLLYY 174 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~~----~~~~~ 174 (299)
+++++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++....+........ ..+. ..+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (288)
T TIGR01250 78 TIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKR 157 (288)
T ss_pred cHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999886644322211100 0000 00000
Q ss_pred ---hc-chhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhc-----c-cccchHHHHHhhcCCCChhhhhcccccc
Q 022316 175 ---YG-MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE-----R-QSSNVWHFLEAINGRPDISEGLRKLQCR 244 (299)
Q Consensus 175 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P 244 (299)
.+ ............+........ . ..+............ . ....+. ........+....+.++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~P 233 (288)
T TIGR01250 158 CEASGDYDNPEYQEAVEVFYHHLLCRT-R-KWPEALKHLKSGMNTNVYNIMQGPNEFT--ITGNLKDWDITDKLSEIKVP 233 (288)
T ss_pred HHhccCcchHHHHHHHHHHHHHhhccc-c-cchHHHHHHhhccCHHHHhcccCCcccc--ccccccccCHHHHhhccCCC
Confidence 00 000000000000000000000 0 000100000000000 0 000000 00001123455667899999
Q ss_pred EEEEecCCCcch-hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 245 SLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 245 ~lii~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+++++|++|.+. +....+.+.+++ .++++++++||..+.|-++.+++.++++
T Consensus 234 ~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~f 286 (288)
T TIGR01250 234 TLLTVGEFDTMTPEAAREMQELIAG--SRLVVFPDGSHMTMIEDPEVYFKLLSDF 286 (288)
T ss_pred EEEEecCCCccCHHHHHHHHHhccC--CeEEEeCCCCCCcccCCHHHHHHHHHHH
Confidence 999999999875 556666666654 7899999999999988877777666654
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=200.21 Aligned_cols=252 Identities=12% Similarity=0.068 Sum_probs=146.6
Q ss_pred ceeecCCceEEEEeccCC--CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 23 NLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~--~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
.++..++-+|.|+.+-+. ..+.|+++||++.+... |... ...+ ..||+|+++|+||||.|+.. ....
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~------~~~~-~~~l~~~g~~via~D~~G~G~S~~~---~~~~ 73 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGR------YEEL-AENISSLGILVFSHDHIGHGRSNGE---KMMI 73 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccch------HHHH-HHHHHhCCCEEEEccCCCCCCCCCc---cCCc
Confidence 345567778999877553 34566777999877643 6444 4545 55999999999999999642 1223
Q ss_pred ccHHHHHHHHHHHHHhc----CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhh
Q 022316 100 LSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (299)
.++.++.+|+.+.++.+ ...+++|+||||||++|+.+|.++|++|+++|+++|......... . ..+.......
T Consensus 74 ~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~-~--~~~~~~~~~~ 150 (276)
T PHA02857 74 DDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPR-L--NLLAAKLMGI 150 (276)
T ss_pred CCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccH-H--HHHHHHHHHH
Confidence 46667777777766543 346899999999999999999999999999999998654321100 0 0000000000
Q ss_pred cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHh-hhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCc
Q 022316 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRL-LDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 254 (299)
..... .... +....... +......+... ....................+..+.+.++++|+|+|+|++|.
T Consensus 151 ~~~~~----~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~ 221 (276)
T PHA02857 151 FYPNK----IVGK-LCPESVSR----DMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNE 221 (276)
T ss_pred hCCCC----ccCC-CCHhhccC----CHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCC
Confidence 00000 0000 00000000 01111111000 000000000000111101123345678999999999999999
Q ss_pred ch--hhhHHHhhhccccCceEEEEcCchhhhHhHH-------HHHHHHhhhh
Q 022316 255 FH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGF-------LVLLASFCES 297 (299)
Q Consensus 255 ~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f-------~~~~~~~~~~ 297 (299)
++ +.+.++.+.+.. .+++.+++++||.+..|- .+.+..|+++
T Consensus 222 i~~~~~~~~l~~~~~~-~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 222 ISDVSGAYYFMQHANC-NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred cCChHHHHHHHHHccC-CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHH
Confidence 98 677777777644 488999999999888653 3444556654
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-29 Score=194.16 Aligned_cols=233 Identities=16% Similarity=0.159 Sum_probs=145.0
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcE
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 121 (299)
.|+|||+||++.++.. | ..+...+.++|+|+++|+||||.|... ..++++++++++.+.+ .+++
T Consensus 4 ~~~iv~~HG~~~~~~~------~-~~~~~~l~~~~~vi~~d~~G~G~s~~~-----~~~~~~~~~~~~~~~~----~~~~ 67 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEV------F-RCLDEELSAHFTLHLVDLPGHGRSRGF-----GPLSLADAAEAIAAQA----PDPA 67 (245)
T ss_pred CceEEEEcCCCCchhh------H-HHHHHhhccCeEEEEecCCcCccCCCC-----CCcCHHHHHHHHHHhC----CCCe
Confidence 3789999999888744 6 344567778899999999999998542 2367888888876654 2689
Q ss_pred EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHH---HhhhhhhhHHhhcchhHHHHHHHHhhhccccccCC
Q 022316 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL---YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA 198 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (299)
+++||||||.+++.+|.++|++|+++|++++.+.......+. .......+... ..... ......++........
T Consensus 68 ~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~ 144 (245)
T TIGR01738 68 IWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQ--LSDDY-QRTIERFLALQTLGTP 144 (245)
T ss_pred EEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHH--hhhhH-HHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999998876432111110 00000000000 00000 0011111110000000
Q ss_pred CCCchHHHHHHHHhhhcccc---cchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceE
Q 022316 199 QVPESDIVQACRRLLDERQS---SNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSAL 273 (299)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~ 273 (299)
........+...+..... ..+...+..+.. .+....+.+|++|+++|+|++|.++ +..+.+.+.+++ +++
T Consensus 145 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~--~~~ 219 (245)
T TIGR01738 145 --TARQDARALKQTLLARPTPNVQVLQAGLEILAT-VDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH--SEL 219 (245)
T ss_pred --ccchHHHHHHHHhhccCCCCHHHHHHHHHHhhc-ccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCC--CeE
Confidence 011111222222221111 122222222222 4566678899999999999999998 555666777754 889
Q ss_pred EEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 274 VEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 274 ~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+.++++||.++.|-++.++..+..+
T Consensus 220 ~~~~~~gH~~~~e~p~~~~~~i~~f 244 (245)
T TIGR01738 220 YIFAKAAHAPFLSHAEAFCALLVAF 244 (245)
T ss_pred EEeCCCCCCccccCHHHHHHHHHhh
Confidence 9999999999998888887776654
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-28 Score=195.24 Aligned_cols=257 Identities=14% Similarity=0.069 Sum_probs=158.2
Q ss_pred cceeecC-CceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 22 DNLIKTS-HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 22 ~~~i~~~-~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
+.++... +.+++|...|++++++|||+||++.++.. + .....+..++|+|+++|+||||.|..+.. ...+
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~------~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~--~~~~ 76 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTD------P-GCRRFFDPETYRIVLFDQRGCGKSTPHAC--LEEN 76 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCC------H-HHHhccCccCCEEEEECCCCCCCCCCCCC--cccC
Confidence 3466665 45899999997668889999998766532 1 11112224689999999999999964321 2246
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHh--------hhhhhhH
Q 022316 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN--------KVMSNLL 172 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--------~~~~~~~ 172 (299)
+.+++++++..+++.+++++++++||||||.+++.++.++|++|+++|++++....+....+... ..+....
T Consensus 77 ~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (306)
T TIGR01249 77 TTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFM 156 (306)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999986553321111100 0000000
Q ss_pred Hhhcc----hhHHHHHHHHhhhccccccCCCCCchHHHHHHHH--------hhhcccccch--------HHHHHh-----
Q 022316 173 YYYGM----CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRR--------LLDERQSSNV--------WHFLEA----- 227 (299)
Q Consensus 173 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~--------~~~~~~----- 227 (299)
..... .... ......++... ++....+.. .+.......+ ...+..
T Consensus 157 ~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (306)
T TIGR01249 157 DSIPENERNEQLV-NAYHDRLQSGD---------EETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHY 226 (306)
T ss_pred hhCChhhhhccHH-HHHHHHccCCC---------HHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhH
Confidence 00000 0111 11112222111 111111111 1111100000 000000
Q ss_pred -----hcC-CCChhhhhccc-cccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhH-HHHHHHHhhhh
Q 022316 228 -----ING-RPDISEGLRKL-QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLG-FLVLLASFCES 297 (299)
Q Consensus 228 -----~~~-~~~~~~~~~~i-~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-f~~~~~~~~~~ 297 (299)
+.. ..+....+.++ ++|+|+|+|++|.++ +.+.++.+.+++ .++++++++||.+..+ -++.+..+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~i~~~~~~ 304 (306)
T TIGR01249 227 FVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPE--AELKVTNNAGHSAFDPNNLAALVHALET 304 (306)
T ss_pred HHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCC--CEEEEECCCCCCCCChHHHHHHHHHHHH
Confidence 000 11234456777 699999999999998 667788888765 8899999999998643 56667777766
Q ss_pred cC
Q 022316 298 EF 299 (299)
Q Consensus 298 ~~ 299 (299)
+|
T Consensus 305 ~~ 306 (306)
T TIGR01249 305 YL 306 (306)
T ss_pred hC
Confidence 54
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-29 Score=191.78 Aligned_cols=222 Identities=22% Similarity=0.314 Sum_probs=145.4
Q ss_pred EEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEE
Q 022316 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124 (299)
Q Consensus 45 lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lv 124 (299)
|||+||++.+... |.+ +.+.+++||+|+++|+||+|.|..+.. ...++++++++++.++++.++.++++++
T Consensus 1 vv~~hG~~~~~~~------~~~-~~~~l~~~~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~lv 71 (228)
T PF12697_consen 1 VVFLHGFGGSSES------WDP-LAEALARGYRVIAFDLPGHGRSDPPPD--YSPYSIEDYAEDLAELLDALGIKKVILV 71 (228)
T ss_dssp EEEE-STTTTGGG------GHH-HHHHHHTTSEEEEEECTTSTTSSSHSS--GSGGSHHHHHHHHHHHHHHTTTSSEEEE
T ss_pred eEEECCCCCCHHH------HHH-HHHHHhCCCEEEEEecCCccccccccc--cCCcchhhhhhhhhhccccccccccccc
Confidence 7999999988844 644 455567899999999999999965321 3458999999999999999999999999
Q ss_pred eeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh--HHHHhhhhhhhHHhh-cchhHHHHHHHHhhhccccccCCCCC
Q 022316 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWLYNKVMSNLLYYY-GMCGVVKELLLKRYFSKEVRGNAQVP 201 (299)
Q Consensus 125 G~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (299)
|||+||.+++.++.++|++|+++|++++........ ... ...+....... .............++..
T Consensus 72 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 141 (228)
T PF12697_consen 72 GHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFG-PSFIRRLLAWRSRSLRRLASRFFYRWFDG--------- 141 (228)
T ss_dssp EETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTH---------
T ss_pred ccccccccccccccccccccccceeeccccccccccccccc-chhhhhhhhcccccccccccccccccccc---------
Confidence 999999999999999999999999999988653222 100 01111110000 00000001111111111
Q ss_pred chHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCc
Q 022316 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTR 279 (299)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~ 279 (299)
....+.+.. ....+...........+....++++++|+++++|++|.++ +..+.+.+.+++ ++++++|++
T Consensus 142 -~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~ 213 (228)
T PF12697_consen 142 -DEPEDLIRS-----SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPN--AELVVIPGA 213 (228)
T ss_dssp -HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT--EEEEEETTS
T ss_pred -ccccccccc-----cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCC--CEEEEECCC
Confidence 111111111 0111111111100113445667889999999999999997 556666666654 899999999
Q ss_pred hhhhHhHHHHHHHH
Q 022316 280 VYISLLGFLVLLAS 293 (299)
Q Consensus 280 ~H~~~~~f~~~~~~ 293 (299)
||.++.+-++.++.
T Consensus 214 gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 214 GHFLFLEQPDEVAE 227 (228)
T ss_dssp SSTHHHHSHHHHHH
T ss_pred CCccHHHCHHHHhc
Confidence 99999998888764
|
... |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=200.73 Aligned_cols=258 Identities=12% Similarity=0.112 Sum_probs=150.8
Q ss_pred Ccceeec-CCceEEEEeccCC----CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC
Q 022316 21 KDNLIKT-SHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (299)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~ 95 (299)
+...++. ++.+|+|+.++++ .+++|||+||++.+. . +.|......+...||+|+++|+||||.|....
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~-~----~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~-- 105 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDI-S----WTFQSTAIFLAQMGFACFALDLEGHGRSEGLR-- 105 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCc-c----eehhHHHHHHHhCCCEEEEecCCCCCCCCCcc--
Confidence 3445555 5558999887643 245699999997553 1 11322222344569999999999999996321
Q ss_pred CCCcccHHHHHHHHHHHHHhcCC------CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh--HHHHhhh
Q 022316 96 DEPVLSVDDLADQIAEVLNHFGL------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWLYNKV 167 (299)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~------~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~ 167 (299)
....+++++++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|+++|........ .+....
T Consensus 106 -~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~- 183 (330)
T PLN02298 106 -AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQ- 183 (330)
T ss_pred -ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHH-
Confidence 2236889999999999987753 369999999999999999999999999999999876432210 010000
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCC-CCchHHHHHHHHhhh-ccc-ccchHHHHHhhcCCCChhhhhcccccc
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQ-VPESDIVQACRRLLD-ERQ-SSNVWHFLEAINGRPDISEGLRKLQCR 244 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P 244 (299)
....+.. ............... .........+..... ... ....................+.++++|
T Consensus 184 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 253 (330)
T PLN02298 184 ILTFVAR----------FLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIP 253 (330)
T ss_pred HHHHHHH----------HCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCC
Confidence 0000000 000000000000000 000000011100000 000 000000111111001234557889999
Q ss_pred EEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhH--------HHHHHHHhhhh
Q 022316 245 SLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLG--------FLVLLASFCES 297 (299)
Q Consensus 245 ~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--------f~~~~~~~~~~ 297 (299)
+|+|+|++|.++ +.++.+.+.++..+++++++++++|.++.+ +.+.+..|+++
T Consensus 254 vLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 254 FIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred EEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 999999999998 667777777765568999999999998752 44556666654
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=198.82 Aligned_cols=265 Identities=17% Similarity=0.205 Sum_probs=160.3
Q ss_pred cceeecCCc--eEEEEeccCC---------CCCeEEEecccccchhhhccccccCchhhhcccCc--eEEEEECCCCCCC
Q 022316 22 DNLIKTSHG--SLSVTIYGDQ---------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN--FCIYHINPPGHEF 88 (299)
Q Consensus 22 ~~~i~~~~~--~l~~~~~g~~---------~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~--~~vi~~D~~G~G~ 88 (299)
+..++...+ .+.....|.. ++|+||++||++.+... |... ...+.+. ++|+++|++|+|.
T Consensus 27 ~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~------w~~~-~~~L~~~~~~~v~aiDl~G~g~ 99 (326)
T KOG1454|consen 27 STSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFS------WRRV-VPLLSKAKGLRVLAIDLPGHGY 99 (326)
T ss_pred ceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCccc------Hhhh-ccccccccceEEEEEecCCCCc
Confidence 344555555 5666665544 68899999999997744 7554 4555554 9999999999994
Q ss_pred -CCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEE---EecCCCCCcchhHHHH
Q 022316 89 -GAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLI---LVSPLCKAPSWTEWLY 164 (299)
Q Consensus 89 -S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~ 164 (299)
|..+. ...|+..++++.+..++.....++++++|||+||.+|+.+|+.+|+.|+++| ++++............
T Consensus 100 ~s~~~~---~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~ 176 (326)
T KOG1454|consen 100 SSPLPR---GPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGL 176 (326)
T ss_pred CCCCCC---CCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHH
Confidence 43322 3459999999999999999999999999999999999999999999999999 6666555433332221
Q ss_pred hhhhhhhHHhhcchhHHHHHHHHhhhccccccCCC---CCchHHHHHHHHhhhcc-----cccchHHHHHhhcC-CCChh
Q 022316 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQ---VPESDIVQACRRLLDER-----QSSNVWHFLEAING-RPDIS 235 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~ 235 (299)
+..+.....................+......... .......+......... .......+...... .....
T Consensus 177 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T KOG1454|consen 177 RRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLL 256 (326)
T ss_pred HHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHH
Confidence 11111111000000000000000000000000000 00011111111111100 00111111111111 12333
Q ss_pred hhhcccc-ccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 236 EGLRKLQ-CRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 236 ~~~~~i~-~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
..+.++. ||+|+++|+.|+++ +.+..+.++++ ++++++++++||.+..|.++.+++.++++
T Consensus 257 ~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p--n~~~~~I~~~gH~~h~e~Pe~~~~~i~~F 320 (326)
T KOG1454|consen 257 SLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLP--NAELVEIPGAGHLPHLERPEEVAALLRSF 320 (326)
T ss_pred HhhccccCCceEEEEcCcCCccCHHHHHHHHhhCC--CceEEEeCCCCcccccCCHHHHHHHHHHH
Confidence 4567776 99999999999998 66777878774 49999999999999999888888777665
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-28 Score=189.79 Aligned_cols=241 Identities=20% Similarity=0.212 Sum_probs=150.2
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHH-HHHHHHhcCCCc
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ-IAEVLNHFGLGA 120 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~-l~~~l~~l~~~~ 120 (299)
+|+|||+||++.+... |.+. ...|.++|+|+++|+||+|.|..+ ......++++++++ +..+++.++.++
T Consensus 1 ~~~vv~~hG~~~~~~~------~~~~-~~~L~~~~~v~~~d~~g~G~s~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD------WQAL-IELLGPHFRCLAIDLPGHGSSQSP--DEIERYDFEEAAQDILATLLDQLGIEP 71 (251)
T ss_pred CCEEEEEcCCCCchhh------HHHH-HHHhcccCeEEEEcCCCCCCCCCC--CccChhhHHHHHHHHHHHHHHHcCCCe
Confidence 4789999999887754 6444 555668999999999999998543 22345789999999 788889988899
Q ss_pred EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH----hhhhhhhHHhhcchhHHHHHHHHhhhcccccc
Q 022316 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY----NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRG 196 (299)
Q Consensus 121 ~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (299)
++++||||||.+++.+|.++|++|++++++++.+.......... .......+........ ...++......
T Consensus 72 ~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 146 (251)
T TIGR03695 72 FFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAF-----LDDWYQQPLFA 146 (251)
T ss_pred EEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHH-----HHHHhcCceee
Confidence 99999999999999999999999999999998765432211110 0001111111111111 11111111000
Q ss_pred CCCCCchHHHHHHHHhhhcccccchHHHHHhhc--CCCChhhhhccccccEEEEecCCCcch-hhhHHHhhhccccCceE
Q 022316 197 NAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSAL 273 (299)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~~ 273 (299)
......+.....+...............+.... ...+....+.++++|+++|+|++|..+ +..+.+.+..+ +.++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~ 224 (251)
T TIGR03695 147 SQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQIAKEMQKLLP--NLTL 224 (251)
T ss_pred ecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHHHHHHHHhcCC--CCcE
Confidence 000001222222222221222222222222111 123444567889999999999999876 44555555554 4889
Q ss_pred EEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 274 VEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 274 ~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+++|++||.++.+-.+.++..+..+
T Consensus 225 ~~~~~~gH~~~~e~~~~~~~~i~~~ 249 (251)
T TIGR03695 225 VIIANAGHNIHLENPEAFAKILLAF 249 (251)
T ss_pred EEEcCCCCCcCccChHHHHHHHHHH
Confidence 9999999999988777776666554
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=197.37 Aligned_cols=251 Identities=14% Similarity=0.150 Sum_probs=158.0
Q ss_pred ceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccH
Q 022316 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (299)
..+...+.+++|...|++++|+|||+||++.+... |... ...|.++|+|+++|+||||.|.... ...++
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~------~~~~-~~~l~~~~~v~~~d~~g~G~s~~~~----~~~~~ 180 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNN------WLFN-HAALAAGRPVIALDLPGHGASSKAV----GAGSL 180 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccch------HHHH-HHHHhcCCEEEEEcCCCCCCCCCCC----CCCCH
Confidence 45666778899999887678899999999887744 5333 4566778999999999999985322 24789
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHH
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
+++++++..+++.++.++++++||||||.+++.+|.++|++++++|++++............... . .... ....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~-~---~~~~-~~~~- 254 (371)
T PRK14875 181 DELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGF-V---AAES-RREL- 254 (371)
T ss_pred HHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHh-h---cccc-hhHH-
Confidence 99999999999999999999999999999999999999999999999988654332111110000 0 0000 0000
Q ss_pred HHHHHhhhccccccCCCCCchHHHHHHHHhhhccc-ccchHHHHHhh----cCCCChhhhhccccccEEEEecCCCcchh
Q 022316 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAI----NGRPDISEGLRKLQCRSLIFVGESSPFHS 257 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~i~~P~lii~G~~D~~~~ 257 (299)
...+...+...... .......+........ ...+....... ....+....+.+++||+|+++|++|.++.
T Consensus 255 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp 329 (371)
T PRK14875 255 KPVLELLFADPALV-----TRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIP 329 (371)
T ss_pred HHHHHHHhcChhhC-----CHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccC
Confidence 00111111110000 1111111111111000 00111111111 11134445678899999999999999882
Q ss_pred hhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 258 EAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
.. ..+.+. .+..+.++|++||..+++-++.++..+.++
T Consensus 330 ~~--~~~~l~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 367 (371)
T PRK14875 330 AA--HAQGLP-DGVAVHVLPGAGHMPQMEAAADVNRLLAEF 367 (371)
T ss_pred HH--HHhhcc-CCCeEEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 11 112232 248899999999999988777776666544
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-28 Score=189.91 Aligned_cols=264 Identities=14% Similarity=0.087 Sum_probs=165.9
Q ss_pred cceeecCCceEEEEeccCCCC--CeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 22 DNLIKTSHGSLSVTIYGDQDK--PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~--p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
..+...++..+.|..+-.... .+||++||.+.+... |...+..+...||.|+++|+||||.|.. ...+..
T Consensus 12 ~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~r------y~~la~~l~~~G~~V~~~D~RGhG~S~r--~~rg~~ 83 (298)
T COG2267 12 GYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGR------YEELADDLAARGFDVYALDLRGHGRSPR--GQRGHV 83 (298)
T ss_pred ceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHH------HHHHHHHHHhCCCEEEEecCCCCCCCCC--CCcCCc
Confidence 345556677888888765433 589999999998855 3344556667799999999999999962 123345
Q ss_pred ccHHHHHHHHHHHHHhcCC----CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhh
Q 022316 100 LSVDDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~----~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (299)
.++.++.+|+..+++.... .+++|+||||||.|++.++.+++.+|+++|+.+|.......... .....+ ...
T Consensus 84 ~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~---~~~~~~-~~~ 159 (298)
T COG2267 84 DSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILR---LILARL-ALK 159 (298)
T ss_pred hhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHH---HHHHHH-hcc
Confidence 6699999999999988753 68999999999999999999999999999999998887641100 000000 000
Q ss_pred cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhh-cccccchHHHHHhhcCC-CChhhhhccccccEEEEecCCC
Q 022316 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLD-ERQSSNVWHFLEAINGR-PDISEGLRKLQCRSLIFVGESS 253 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~lii~G~~D 253 (299)
..........+..-............+++..+.+...-. .............+... .........+++|+|+++|++|
T Consensus 160 ~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D 239 (298)
T COG2267 160 LLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDD 239 (298)
T ss_pred cccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCC
Confidence 111110000000000001111111113455555444322 11222222222222211 1234446788999999999999
Q ss_pred cchh---hhHHHhhhccccCceEEEEcCchhhhHhH-------HHHHHHHhhhh
Q 022316 254 PFHS---EAVHMTSKIDRRYSALVEVWTRVYISLLG-------FLVLLASFCES 297 (299)
Q Consensus 254 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-------f~~~~~~~~~~ 297 (299)
.++. ...++.++......++++++++.|.++.| +++.+..|+.+
T Consensus 240 ~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 240 RVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred ccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 9983 45555666666668999999999998864 55666666654
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-27 Score=224.43 Aligned_cols=254 Identities=17% Similarity=0.193 Sum_probs=158.9
Q ss_pred EEEEeccC-CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCC----CCCCcccHHHHH
Q 022316 32 LSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS----DDEPVLSVDDLA 106 (299)
Q Consensus 32 l~~~~~g~-~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~ 106 (299)
++|...|. +++|+|||+||++.+... |.+. ...+.++|+|+++|+||||.|..... .....+++++++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~------w~~~-~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a 1432 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGED------WIPI-MKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVA 1432 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHH------HHHH-HHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHH
Confidence 45556664 346899999999999855 6443 56667789999999999999864321 012347899999
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHH
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLL 186 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (299)
+++..++++++.++++|+||||||.+++.+|.++|++|+++|++++.+.......+............ .+.......+.
T Consensus 1433 ~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~ 1511 (1655)
T PLN02980 1433 DLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRAR-MLIDHGLEIFL 1511 (1655)
T ss_pred HHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHH-HHHhhhHHHHH
Confidence 99999999999999999999999999999999999999999999876544322211110000000000 00000001122
Q ss_pred HhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhc--CCCChhhhhccccccEEEEecCCCcch-hhhHHHh
Q 022316 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMT 263 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~lii~G~~D~~~-~~~~~~~ 263 (299)
..++........ ...+...+.+...............+..+. ...+..+.+.+|++|+|+|+|++|..+ +.+.++.
T Consensus 1512 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~~a~~~~ 1590 (1655)
T PLN02980 1512 ENWYSGELWKSL-RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQIAQKMY 1590 (1655)
T ss_pred HHhccHHHhhhh-ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHHHHHHHH
Confidence 333332211000 001222222222222222222232222221 224566779999999999999999986 4456666
Q ss_pred hhcccc----------CceEEEEcCchhhhHhHHHHHHHHh
Q 022316 264 SKIDRR----------YSALVEVWTRVYISLLGFLVLLASF 294 (299)
Q Consensus 264 ~~~~~~----------~~~~~~~~~~~H~~~~~f~~~~~~~ 294 (299)
+.++.. .++++++|++||.++.|-++.++.-
T Consensus 1591 ~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~ 1631 (1655)
T PLN02980 1591 REIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRA 1631 (1655)
T ss_pred HHccccccccccccccceEEEEECCCCCchHHHCHHHHHHH
Confidence 666541 2589999999999998755555433
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=191.80 Aligned_cols=260 Identities=16% Similarity=0.152 Sum_probs=146.8
Q ss_pred eEEEEe-ccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC-cccHHHHHHH
Q 022316 31 SLSVTI-YGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP-VLSVDDLADQ 108 (299)
Q Consensus 31 ~l~~~~-~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~-~~~~~~~~~~ 108 (299)
.+.+.. .+++++|+|||+||++.+... |.+.+ ..+.++|+|+++|+||||.|..+...... ....+.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~------~~~~~-~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 165 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGF------FFRNF-DALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDS 165 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhH------HHHHH-HHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHH
Confidence 454333 344567899999999876533 43443 55667899999999999999643210000 1112346778
Q ss_pred HHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHH---HHh------hhhhhhH-------
Q 022316 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW---LYN------KVMSNLL------- 172 (299)
Q Consensus 109 l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~------~~~~~~~------- 172 (299)
+.++++.+++++++|+||||||.+++.+|.++|++|+++|+++|.........+ ... ..+...+
T Consensus 166 i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 245 (402)
T PLN02894 166 FEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTP 245 (402)
T ss_pred HHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCH
Confidence 888888899999999999999999999999999999999999987644321111 100 0000000
Q ss_pred ----Hhhcc-hhHHHHHHHHhhhccccccC-CCCCchHHH-HHHHHhhhccc-ccchHHHHHhh--cCCCChhhhhcccc
Q 022316 173 ----YYYGM-CGVVKELLLKRYFSKEVRGN-AQVPESDIV-QACRRLLDERQ-SSNVWHFLEAI--NGRPDISEGLRKLQ 242 (299)
Q Consensus 173 ----~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~i~ 242 (299)
...+. ............|....... ......+.. +.+........ .......+... ....+....+.+|+
T Consensus 246 ~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 325 (402)
T PLN02894 246 QKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWK 325 (402)
T ss_pred HHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCC
Confidence 00000 00000111111121111000 000001111 11111111111 11111111111 11245556688999
Q ss_pred ccEEEEecCCCcch-hhhHHHhhhccccCceEEEEcCchhhhHhH----HHHHHHHhhhhc
Q 022316 243 CRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLLG----FLVLLASFCESE 298 (299)
Q Consensus 243 ~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----f~~~~~~~~~~~ 298 (299)
+|+++|+|++|.+. +....+.+.++ .++++++++++||.++.| |.+.+..||+..
T Consensus 326 vP~liI~G~~D~i~~~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 326 VPTTFIYGRHDWMNYEGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKY 385 (402)
T ss_pred CCEEEEEeCCCCCCcHHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHh
Confidence 99999999999876 44555555553 347899999999999887 555566666543
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=187.02 Aligned_cols=241 Identities=10% Similarity=0.107 Sum_probs=145.8
Q ss_pred CCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 28 ~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
++.+++|...+ +++|+|||+||++.+... |.+. ...| ..||+|+++|+||||.|.... ...+++++++
T Consensus 5 ~~~~~~~~~~~-~~~p~vvliHG~~~~~~~------w~~~-~~~L~~~g~~vi~~dl~g~G~s~~~~---~~~~~~~~~~ 73 (273)
T PLN02211 5 NGEEVTDMKPN-RQPPHFVLIHGISGGSWC------WYKI-RCLMENSGYKVTCIDLKSAGIDQSDA---DSVTTFDEYN 73 (273)
T ss_pred ccccccccccc-CCCCeEEEECCCCCCcCc------HHHH-HHHHHhCCCEEEEecccCCCCCCCCc---ccCCCHHHHH
Confidence 44566666632 467899999999887743 7444 4445 469999999999999874321 1247999999
Q ss_pred HHHHHHHHhcC-CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH-hhhhhhhHHhh-------cc
Q 022316 107 DQIAEVLNHFG-LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-NKVMSNLLYYY-------GM 177 (299)
Q Consensus 107 ~~l~~~l~~l~-~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~ 177 (299)
+++.++++.++ .++++|+||||||.++..++.++|++|+++|++++............ ........... +.
T Consensus 74 ~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PLN02211 74 KPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGL 153 (273)
T ss_pred HHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeecc
Confidence 99999999985 58999999999999999999999999999999987543222111000 00000000000 00
Q ss_pred -------hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccc-cccEEEEe
Q 022316 178 -------CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFV 249 (299)
Q Consensus 178 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~ 249 (299)
...........++... .++....+........+ ...+.. .+......++ ++|+++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~vP~l~I~ 218 (273)
T PLN02211 154 GPDQPPTSAIIKKEFRRKILYQM--------SPQEDSTLAAMLLRPGP------ILALRS-ARFEEETGDIDKVPRVYIK 218 (273)
T ss_pred CCCCCCceeeeCHHHHHHHHhcC--------CCHHHHHHHHHhcCCcC------cccccc-ccccccccccCccceEEEE
Confidence 0000000000000000 01111111111100000 001111 1222223445 78999999
Q ss_pred cCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 250 GESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 250 G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
|++|..+ +..+.+.+.++. .++++++ +||.++++-++.++..+..
T Consensus 219 g~~D~~ip~~~~~~m~~~~~~--~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 219 TLHDHVVKPEQQEAMIKRWPP--SQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred eCCCCCCCHHHHHHHHHhCCc--cEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 9999998 566777777765 5788886 8999999988888877653
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-26 Score=184.91 Aligned_cols=266 Identities=12% Similarity=0.157 Sum_probs=166.5
Q ss_pred CCceEEEEeccCC---CCCeEEEecccccchhhh-------ccccccCchhhh--cc-cCceEEEEECCCCCCCCCCC--
Q 022316 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSC-------FQGLFFCPEACS--LL-LHNFCIYHINPPGHEFGAAA-- 92 (299)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~-------~~~~~w~~~~~~--~l-~~~~~vi~~D~~G~G~S~~~-- 92 (299)
+..+|.|+.+|.. +.++||++|++.+++... ....||...+-+ .+ .+.|.||++|..|-|.|..+
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 4458899999963 357999999998855332 113446433322 12 34799999999998753211
Q ss_pred --------CC-------CCCCcccHHHHHHHHHHHHHhcCCCcEE-EEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 93 --------IS-------DDEPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 93 --------~~-------~~~~~~~~~~~~~~l~~~l~~l~~~~~~-lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
.| .+++.++++++++++..+++++++++++ ++||||||++++.+|.++|++|+++|++++.+..
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 01 1245689999999999999999999996 9999999999999999999999999999988776
Q ss_pred cchh--HHHHhhhhhhhHHh----------------hcchhHHHHHHH-----HhhhccccccCCC-C-------CchHH
Q 022316 157 PSWT--EWLYNKVMSNLLYY----------------YGMCGVVKELLL-----KRYFSKEVRGNAQ-V-------PESDI 205 (299)
Q Consensus 157 ~~~~--~~~~~~~~~~~~~~----------------~~~~~~~~~~~~-----~~~~~~~~~~~~~-~-------~~~~~ 205 (299)
..+. .+.. .....+.. .|+.... .... ..++...+..... . .....
T Consensus 199 ~~~~~~~~~~--~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~-~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~ 275 (389)
T PRK06765 199 DAWTSVNVLQ--NWAEAIRLDPNWKGGKYYGEEQPMKGLTLAL-RMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTS 275 (389)
T ss_pred ChhHHHHHHH--HHHHHHHhCCCCCCCCCCCCCCchHHHHHHH-HHHHHHcCCHHHHHHHcCcCccccccccccccchhh
Confidence 5543 1111 11111000 0111010 1011 1122211111000 0 00001
Q ss_pred HHHHH-----HhhhcccccchHHHHHhhcCC------CChhhhhccccccEEEEecCCCcch--hhhHHHhhhccc--cC
Q 022316 206 VQACR-----RLLDERQSSNVWHFLEAINGR------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR--RY 270 (299)
Q Consensus 206 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~--~~ 270 (299)
.+.+. ......++..+....+.+... .++.+.+.+|++|+|+|+|++|.++ +..+++.+.++. .+
T Consensus 276 ~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~ 355 (389)
T PRK06765 276 FEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKY 355 (389)
T ss_pred HHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCC
Confidence 11221 122334555566655554321 2567789999999999999999987 566677777753 24
Q ss_pred ceEEEEcC-chhhhHhHHHHHHHHhhh
Q 022316 271 SALVEVWT-RVYISLLGFLVLLASFCE 296 (299)
Q Consensus 271 ~~~~~~~~-~~H~~~~~f~~~~~~~~~ 296 (299)
++++++++ +||..+++..+.++..+.
T Consensus 356 a~l~~I~s~~GH~~~le~p~~~~~~I~ 382 (389)
T PRK06765 356 AEVYEIESINGHMAGVFDIHLFEKKIY 382 (389)
T ss_pred eEEEEECCCCCcchhhcCHHHHHHHHH
Confidence 88999986 999999876666554433
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-26 Score=186.56 Aligned_cols=248 Identities=13% Similarity=0.118 Sum_probs=147.6
Q ss_pred CCceEEEEeccCC---CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHH
Q 022316 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD 104 (299)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 104 (299)
++..+++..+.+. .+++|||+||++.+... |...+..+...||+|+++|+||||.|+... ....++++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~------~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~---~~~~~~~~ 189 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGR------YLHFAKQLTSCGFGVYAMDWIGHGGSDGLH---GYVPSLDY 189 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHH------HHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCCcCHHH
Confidence 3457788777652 34689999999877533 433333444579999999999999996532 22357888
Q ss_pred HHHHHHHHHHhcCC----CcEEEEeeCccHHHHHHHHHHccC---cccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcc
Q 022316 105 LADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 105 ~~~~l~~~l~~l~~----~~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
+++|+..+++.+.. .+++++||||||.+++.++. +|+ +|+++|+.+|........... ......+
T Consensus 190 ~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~--~~~~~l~----- 261 (395)
T PLN02652 190 VVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIV--GAVAPIF----- 261 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHH--HHHHHHH-----
Confidence 99999999887753 37999999999999997764 564 799999999876443211111 0000000
Q ss_pred hhHHHHHHHHhh-hcccccc-CCCCCchHH-HHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCc
Q 022316 178 CGVVKELLLKRY-FSKEVRG-NAQVPESDI-VQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (299)
Q Consensus 178 ~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 254 (299)
......+ +...... .....+++. ...+..................+.........+.+|++|+|+++|++|.
T Consensus 262 -----~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~ 336 (395)
T PLN02652 262 -----SLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADR 336 (395)
T ss_pred -----HHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCC
Confidence 0000100 0000000 000001111 1111110000000000010001000012345678899999999999999
Q ss_pred ch--hhhHHHhhhccccCceEEEEcCchhhhHh-----HHHHHHHHhhhh
Q 022316 255 FH--SEAVHMTSKIDRRYSALVEVWTRVYISLL-----GFLVLLASFCES 297 (299)
Q Consensus 255 ~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-----~f~~~~~~~~~~ 297 (299)
++ +.++++++++.+.+.+++.+|+++|.++. ++.+.+..|++.
T Consensus 337 vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 337 VTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred CCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHH
Confidence 98 67788888876656889999999998754 466777777765
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=171.83 Aligned_cols=240 Identities=15% Similarity=0.105 Sum_probs=161.5
Q ss_pred eeec-CCceEEEEeccCC----CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 24 LIKT-SHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 24 ~i~~-~~~~l~~~~~g~~----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
.++. ++..+.+..+-+. .+..|+++||++.+.... +...+..+...||.|+++|++|||.|+... ..
T Consensus 31 ~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~-----~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~---~y 102 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWR-----YQSTAKRLAKSGFAVYAIDYEGHGRSDGLH---AY 102 (313)
T ss_pred eEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhh-----HHHHHHHHHhCCCeEEEeeccCCCcCCCCc---cc
Confidence 4444 4448888777652 233789999999886442 223334555679999999999999998533 34
Q ss_pred cccHHHHHHHHHHHHHhcCC------CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH--HH---Hhhh
Q 022316 99 VLSVDDLADQIAEVLNHFGL------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE--WL---YNKV 167 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~------~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~---~~~~ 167 (299)
..+++..++|+....+.... -+.+|+||||||+|++.++.+.|+..+++|+++|......... +. ....
T Consensus 103 i~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~ 182 (313)
T KOG1455|consen 103 VPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTL 182 (313)
T ss_pred CCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHH
Confidence 57899999999888875422 4789999999999999999999999999999999887643221 11 1111
Q ss_pred hhhhHHhhcchhHHHHHHHHhhh-cccc-ccCCCCCchHHHHHHHHhhhc-ccccchHHHHHhhcCCCChhhhhcccccc
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYF-SKEV-RGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCR 244 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 244 (299)
+.. ++++|- .+.. .......+++..+.++..-.. .....+....+.+....++...+.++++|
T Consensus 183 l~~--------------liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvP 248 (313)
T KOG1455|consen 183 LSK--------------LIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVP 248 (313)
T ss_pred HHH--------------hCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccccccc
Confidence 111 111111 0000 000000024444433332222 22223444444444446778889999999
Q ss_pred EEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHh
Q 022316 245 SLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLL 285 (299)
Q Consensus 245 ~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 285 (299)
.+++||+.|.++ ..++.+.+.....+.++..+|+.-|.++.
T Consensus 249 flilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~ 291 (313)
T KOG1455|consen 249 FLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLS 291 (313)
T ss_pred EEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhc
Confidence 999999999998 77888999888888999999999999885
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=200.35 Aligned_cols=123 Identities=19% Similarity=0.199 Sum_probs=97.8
Q ss_pred CcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
+++.+..++.+|+|..+|++++|+|||+||++.+... |.+. .+.+.++|+|+++|+||||.|..+.. ...+
T Consensus 4 ~~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~------w~~~-~~~L~~~~~Vi~~D~~G~G~S~~~~~--~~~~ 74 (582)
T PRK05855 4 RRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEV------WDGV-APLLADRFRVVAYDVRGAGRSSAPKR--TAAY 74 (582)
T ss_pred eEEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHH------HHHH-HHHhhcceEEEEecCCCCCCCCCCCc--cccc
Confidence 3456667788999999998778999999999988744 6444 56668899999999999999964322 2358
Q ss_pred cHHHHHHHHHHHHHhcCCCc-EEEEeeCccHHHHHHHHHH--ccCcccEEEEecC
Q 022316 101 SVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMK--YRHRVLGLILVSP 152 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~-~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~ 152 (299)
+++++++|+..++++++.++ ++|+||||||.+++.++.+ .++++..++.+++
T Consensus 75 ~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 75 TLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 99999999999999998765 9999999999999888766 2445555555543
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=179.80 Aligned_cols=254 Identities=12% Similarity=0.111 Sum_probs=137.2
Q ss_pred CCCcceeecCC-ceEEEEec------cCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCC
Q 022316 19 SGKDNLIKTSH-GSLSVTIY------GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 19 ~~~~~~i~~~~-~~l~~~~~------g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~ 91 (299)
..++..+.+.+ +.+.+... ++.++|+||++||+++++.. .|+...+..++.+||+|+++|+||||.|..
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~----~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~ 145 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDD----SYVRHMLLRARSKGWRVVVFNSRGCADSPV 145 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCC----HHHHHHHHHHHHCCCEEEEEecCCCCCCCC
Confidence 33445666644 56654332 23467899999999776533 112233345567899999999999999864
Q ss_pred CCCCCCCcccHHHHHHHHHHHHHhcCC----CcEEEEeeCccHHHHHHHHHHccCc--ccEEEEecCCCCCcchhHHHHh
Q 022316 92 AISDDEPVLSVDDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRHR--VLGLILVSPLCKAPSWTEWLYN 165 (299)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~l~~----~~~~lvG~S~Gg~va~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~ 165 (299)
..+ ......+++|+.+++++++. .+++++||||||.+++.++.++|++ |+++++++++...........
T Consensus 146 ~~~----~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~- 220 (388)
T PLN02511 146 TTP----QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFH- 220 (388)
T ss_pred CCc----CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHh-
Confidence 322 12234556677776666654 6899999999999999999999987 889888887654311111000
Q ss_pred hhhhhhHHhhcchhHHHHHHH--Hhhhccc--cccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccc
Q 022316 166 KVMSNLLYYYGMCGVVKELLL--KRYFSKE--VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL 241 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 241 (299)
...... ....+......... ...+... ...............+.+.+... ..++......+ .+.+....+++|
T Consensus 221 ~~~~~~-y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~-~~gf~~~~~yy-~~~s~~~~L~~I 297 (388)
T PLN02511 221 KGFNNV-YDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRV-SFGFKSVDAYY-SNSSSSDSIKHV 297 (388)
T ss_pred ccHHHH-HHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhh-cCCCCCHHHHH-HHcCchhhhccC
Confidence 000000 00000000000000 0011000 00000000000011111111110 00111100111 113445678899
Q ss_pred cccEEEEecCCCcch-hhh--HHHhhhccccCceEEEEcCchhhhHhH
Q 022316 242 QCRSLIFVGESSPFH-SEA--VHMTSKIDRRYSALVEVWTRVYISLLG 286 (299)
Q Consensus 242 ~~P~lii~G~~D~~~-~~~--~~~~~~~~~~~~~~~~~~~~~H~~~~~ 286 (299)
++|+|+|+|++|+++ ... ....+.++ ++.+++++++||..+.|
T Consensus 298 ~vPtLiI~g~dDpi~p~~~~~~~~~~~~p--~~~l~~~~~gGH~~~~E 343 (388)
T PLN02511 298 RVPLLCIQAANDPIAPARGIPREDIKANP--NCLLIVTPSGGHLGWVA 343 (388)
T ss_pred CCCeEEEEcCCCCcCCcccCcHhHHhcCC--CEEEEECCCcceecccc
Confidence 999999999999997 222 23444444 48899999999988765
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=157.50 Aligned_cols=249 Identities=14% Similarity=0.152 Sum_probs=160.8
Q ss_pred CCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
..++..+.+++.+|.|..+|.+ ...|+++.|..+++.. . |.+++..+... .+.++++|.||+|.|.++.. ..
T Consensus 20 ~~te~kv~vng~ql~y~~~G~G-~~~iLlipGalGs~~t----D-f~pql~~l~k~l~~TivawDPpGYG~SrPP~R-kf 92 (277)
T KOG2984|consen 20 DYTESKVHVNGTQLGYCKYGHG-PNYILLIPGALGSYKT----D-FPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER-KF 92 (277)
T ss_pred hhhhheeeecCceeeeeecCCC-CceeEecccccccccc----c-CCHHHHhcCCCCceEEEEECCCCCCCCCCCcc-cc
Confidence 3456678889999999999943 3368888888777644 3 55666666655 49999999999999976432 23
Q ss_pred CcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcc
Q 022316 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
+..-+..-+++..++++++..+++.++|+|=||..|+..|+++++.|.++|+.+............. +.++.. ..+
T Consensus 93 ~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~-kgiRdv---~kW 168 (277)
T KOG2984|consen 93 EVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAF-KGIRDV---NKW 168 (277)
T ss_pred hHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHH-hchHHH---hhh
Confidence 3445566678888999999999999999999999999999999999999999998887654333211 000000 000
Q ss_pred hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-
Q 022316 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 256 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~- 256 (299)
.+..++ -....++.+ .+...+..+.. .... .....+..--+..+++++||+||++|+.|+++
T Consensus 169 s~r~R~-P~e~~Yg~e----------~f~~~wa~wvD-----~v~q-f~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~ 231 (277)
T KOG2984|consen 169 SARGRQ-PYEDHYGPE----------TFRTQWAAWVD-----VVDQ-FHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCG 231 (277)
T ss_pred hhhhcc-hHHHhcCHH----------HHHHHHHHHHH-----HHHH-HhhcCCCchHhhhcccccCCeeEeeCCcCCCCC
Confidence 000000 001111111 11111111110 0011 11111111234558899999999999999998
Q ss_pred -hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHH----Hhhhh
Q 022316 257 -SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLA----SFCES 297 (299)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~----~~~~~ 297 (299)
..+--+.... .++++.++|+.+|...+.|.++++ .|+++
T Consensus 232 ~~hv~fi~~~~--~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 232 DPHVCFIPVLK--SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred CCCccchhhhc--ccceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 3333344444 348999999999999887776665 55554
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=169.53 Aligned_cols=252 Identities=12% Similarity=0.048 Sum_probs=139.2
Q ss_pred CCCcceeecCCc-eEEEEec--cC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHG-SLSVTIY--GD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 19 ~~~~~~i~~~~~-~l~~~~~--g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
......+++++| .+.+... +. +++|+||++||++++..+ .+....+..+...||+|+++|+||||.+....
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~----~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~ 105 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNS----PYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRL 105 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcC----HHHHHHHHHHHHCCCEEEEEeCCCCCCCccCC
Confidence 334455667555 4443322 11 346899999999876433 11222334455679999999999999774322
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCc--ccEEEEecCCCCCcchhHHHHhhhhhhh
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR--VLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (299)
+........+|+...+..+.+.++..+++++||||||.+++.++.++++. ++++|+++++............ .....
T Consensus 106 ~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~-~~~~~ 184 (324)
T PRK10985 106 HRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQ-GFSRV 184 (324)
T ss_pred cceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhh-hHHHH
Confidence 21111223556555555555667778999999999999998888887654 8999999987654322111100 00000
Q ss_pred HHhhcchhHHHH---HHHHhhhccccccCCCCCchHHH------HHHHHhhhcccccchHHHHHhhcCCCChhhhhcccc
Q 022316 172 LYYYGMCGVVKE---LLLKRYFSKEVRGNAQVPESDIV------QACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 242 (299)
Q Consensus 172 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 242 (299)
....+...... .....+..... . +.+.. ..+.+.. ..+..++......+.. .+....+++|+
T Consensus 185 -~~~~l~~~l~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~fd~~~-~~~~~g~~~~~~~y~~-~~~~~~l~~i~ 255 (324)
T PRK10985 185 -YQRYLLNLLKANAARKLAAYPGTLP--I----NLAQLKSVRRLREFDDLI-TARIHGFADAIDYYRQ-CSALPLLNQIR 255 (324)
T ss_pred -HHHHHHHHHHHHHHHHHHhcccccc--C----CHHHHhcCCcHHHHhhhh-eeccCCCCCHHHHHHH-CChHHHHhCCC
Confidence 00000000100 01111111100 0 11111 1111111 1122233333333322 34557789999
Q ss_pred ccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhH
Q 022316 243 CRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLG 286 (299)
Q Consensus 243 ~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 286 (299)
+|+++|+|++|+++ +....+.+..+ +..+++++++||..+.+
T Consensus 256 ~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~ 299 (324)
T PRK10985 256 KPTLIIHAKDDPFMTHEVIPKPESLPP--NVEYQLTEHGGHVGFVG 299 (324)
T ss_pred CCEEEEecCCCCCCChhhChHHHHhCC--CeEEEECCCCCceeeCC
Confidence 99999999999987 33334433333 37889999999987765
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-23 Score=167.98 Aligned_cols=254 Identities=11% Similarity=0.086 Sum_probs=145.3
Q ss_pred CCceEEEEeccCC-CCCeEEEecccccchhhhccc-----------------ccc--C-chhhhcccCceEEEEECCCCC
Q 022316 28 SHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQG-----------------LFF--C-PEACSLLLHNFCIYHINPPGH 86 (299)
Q Consensus 28 ~~~~l~~~~~g~~-~~p~lvl~HG~~~~~~~~~~~-----------------~~w--~-~~~~~~l~~~~~vi~~D~~G~ 86 (299)
++.+|+++.+.++ .+.+|+++||++.|....+.. .|| . ..+..+...||+|+++|+|||
T Consensus 6 ~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGH 85 (332)
T TIGR01607 6 DGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGH 85 (332)
T ss_pred CCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccccc
Confidence 4557877776542 345899999999998532111 010 0 123344467999999999999
Q ss_pred CCCCCCCCCCCCcccHHHHHHHHHHHHHhcC------------------------CCcEEEEeeCccHHHHHHHHHHccC
Q 022316 87 EFGAAAISDDEPVLSVDDLADQIAEVLNHFG------------------------LGAVMCMGVTAGAYILTLFAMKYRH 142 (299)
Q Consensus 87 G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~------------------------~~~~~lvG~S~Gg~va~~~a~~~p~ 142 (299)
|+|...........+++++++|+..+++.+. ..+++|+||||||.+++.++.++++
T Consensus 86 G~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~ 165 (332)
T TIGR01607 86 GESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGK 165 (332)
T ss_pred CCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcc
Confidence 9986432111222589999999999887642 2478999999999999999876542
Q ss_pred --------cccEEEEecCCCCCcch-------hHHHHhhhhhhhHHhhcchhHHHHHHHHhh-hcc-ccccCCCCCchHH
Q 022316 143 --------RVLGLILVSPLCKAPSW-------TEWLYNKVMSNLLYYYGMCGVVKELLLKRY-FSK-EVRGNAQVPESDI 205 (299)
Q Consensus 143 --------~v~~lvl~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 205 (299)
.++++|+++|....... ..... ..+...+.. ....+ +.. ..... ++..
T Consensus 166 ~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~-~~l~~~~~~----------~~p~~~~~~~~~~~~----~~~~ 230 (332)
T TIGR01607 166 SNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFY-LPVMNFMSR----------VFPTFRISKKIRYEK----SPYV 230 (332)
T ss_pred ccccccccccceEEEeccceEEecccCCCcchhhhhH-HHHHHHHHH----------HCCcccccCcccccc----Chhh
Confidence 58999988887533110 01000 000011000 00000 000 00000 1222
Q ss_pred HHHHHHhhhcccccchHHHHHhhcCC-CChhhhhccc--cccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCch
Q 022316 206 VQACRRLLDERQSSNVWHFLEAINGR-PDISEGLRKL--QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRV 280 (299)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i--~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 280 (299)
.+.+...-..........+...+... ......+.++ ++|+|+++|++|.++ +.++.+.+++...+++++++++++
T Consensus 231 ~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~ 310 (332)
T TIGR01607 231 NDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMD 310 (332)
T ss_pred hhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCC
Confidence 22222211111111111111111110 1122334555 799999999999998 667777777655568899999999
Q ss_pred hhhHhH-----HHHHHHHhhh
Q 022316 281 YISLLG-----FLVLLASFCE 296 (299)
Q Consensus 281 H~~~~~-----f~~~~~~~~~ 296 (299)
|.++.| +++.+.+|++
T Consensus 311 H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 311 HVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCccCCCHHHHHHHHHHHhh
Confidence 999875 4555666654
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-23 Score=149.58 Aligned_cols=207 Identities=14% Similarity=0.184 Sum_probs=140.4
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh---cC
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---FG 117 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~---l~ 117 (299)
+..|+|+||+.++... . +.+.+.| .+||.|++|.+||||..... .-..+.+|+-+++.+..+. .+
T Consensus 15 ~~AVLllHGFTGt~~D------v-r~Lgr~L~e~GyTv~aP~ypGHG~~~e~----fl~t~~~DW~~~v~d~Y~~L~~~g 83 (243)
T COG1647 15 NRAVLLLHGFTGTPRD------V-RMLGRYLNENGYTVYAPRYPGHGTLPED----FLKTTPRDWWEDVEDGYRDLKEAG 83 (243)
T ss_pred CEEEEEEeccCCCcHH------H-HHHHHHHHHCCceEecCCCCCCCCCHHH----HhcCCHHHHHHHHHHHHHHHHHcC
Confidence 4689999999888755 2 3334444 56999999999999977432 2356778887777666554 45
Q ss_pred CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccC
Q 022316 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 197 (299)
Q Consensus 118 ~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
.+.+.++|.||||.+++.+|..+| ++++|.++++.....+.... ..++.. . + ....+-..
T Consensus 84 y~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~ii-----e~~l~y------~-~-~~kk~e~k----- 143 (243)
T COG1647 84 YDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIII-----EGLLEY------F-R-NAKKYEGK----- 143 (243)
T ss_pred CCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhh-----HHHHHH------H-H-HhhhccCC-----
Confidence 689999999999999999999998 89999999988765544321 111110 0 0 00111111
Q ss_pred CCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEE
Q 022316 198 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVE 275 (299)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~ 275 (299)
+++..+.....+...+......+...+ .+....+..|..|++++.|.+|..+ +.+..+.+.+.....++..
T Consensus 144 ----~~e~~~~e~~~~~~~~~~~~~~~~~~i---~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~ 216 (243)
T COG1647 144 ----DQEQIDKEMKSYKDTPMTTTAQLKKLI---KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKW 216 (243)
T ss_pred ----CHHHHHHHHHHhhcchHHHHHHHHHHH---HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEE
Confidence 233333323323322222333333333 3455668899999999999999998 6777788888777799999
Q ss_pred EcCchhhhHhH
Q 022316 276 VWTRVYISLLG 286 (299)
Q Consensus 276 ~~~~~H~~~~~ 286 (299)
+++.||.+..+
T Consensus 217 ~e~SgHVIt~D 227 (243)
T COG1647 217 LEGSGHVITLD 227 (243)
T ss_pred EccCCceeecc
Confidence 99999987764
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.6e-23 Score=158.46 Aligned_cols=215 Identities=18% Similarity=0.206 Sum_probs=128.0
Q ss_pred eEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 76 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
|+|+++|+||+|.|++........++.+++++++..+++.++.++++++||||||.+++.+|.++|++|+++|+++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 79999999999999730012245699999999999999999999999999999999999999999999999999998741
Q ss_pred CcchhH---HH---HhhhhhhhHHh--hcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhc----ccccchHH
Q 022316 156 APSWTE---WL---YNKVMSNLLYY--YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE----RQSSNVWH 223 (299)
Q Consensus 156 ~~~~~~---~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 223 (299)
...... +. ........... ....................... .............. ........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFV----EDFLKQFQSQQYARFAETDAFDNMFW 156 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccc----cchhhccchhhhhHHHHHHHHhhhcc
Confidence 100000 00 00000000000 00000000000000000000000 00000000000100 00001111
Q ss_pred HHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 224 FLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 224 ~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.........+....+.++++|+++++|++|.++ .....+.+.+++ .++++++++||..+.+-.+.++..+.
T Consensus 157 ~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 157 NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN--SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT--EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC--CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 011111113445667889999999999999998 566666777765 88999999999999998888876653
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.4e-22 Score=154.34 Aligned_cols=226 Identities=12% Similarity=0.068 Sum_probs=131.4
Q ss_pred CCCcceeecCCc-eEEEEeccCC-----CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCC-CCCCC
Q 022316 19 SGKDNLIKTSHG-SLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAA 91 (299)
Q Consensus 19 ~~~~~~i~~~~~-~l~~~~~g~~-----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~-G~S~~ 91 (299)
....|.+.+++| +|.-...-++ +.++||++||++.+... +...+..+..+||.|+.+|.||+ |+|+.
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~------~~~~A~~La~~G~~vLrfD~rg~~GeS~G 81 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDH------FAGLAEYLSSNGFHVIRYDSLHHVGLSSG 81 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHH------HHHHHHHHHHCCCEEEEecCCCCCCCCCC
Confidence 345677888665 6655544432 34789999999987521 12333344467999999999988 88865
Q ss_pred CCCCCCCcccHHHHHHHHHHHHH---hcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhh
Q 022316 92 AISDDEPVLSVDDLADQIAEVLN---HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (299)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~---~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (299)
... ..++....+|+..+++ ..+.+++.|+||||||.+|+..|... .++++|+.+|..............
T Consensus 82 ~~~----~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~-- 153 (307)
T PRK13604 82 TID----EFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGY-- 153 (307)
T ss_pred ccc----cCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhc--
Confidence 332 2333333455544443 34567899999999999997776643 389999999877654222110000
Q ss_pred hhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEE
Q 022316 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (299)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 248 (299)
.. ........ .... ++... .-....+.......+. .......+.++++++|+|+|
T Consensus 154 -~~-~~~p~~~l------p~~~--d~~g~-----~l~~~~f~~~~~~~~~----------~~~~s~i~~~~~l~~PvLiI 208 (307)
T PRK13604 154 -DY-LSLPIDEL------PEDL--DFEGH-----NLGSEVFVTDCFKHGW----------DTLDSTINKMKGLDIPFIAF 208 (307)
T ss_pred -cc-ccCccccc------cccc--ccccc-----cccHHHHHHHHHhcCc----------cccccHHHHHhhcCCCEEEE
Confidence 00 00000000 0000 00000 0000001110000000 00012234466788999999
Q ss_pred ecCCCcch--hhhHHHhhhccccCceEEEEcCchhhh
Q 022316 249 VGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYIS 283 (299)
Q Consensus 249 ~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~ 283 (299)
||+.|.+| +.++.+.+.+...+++++.+|++.|..
T Consensus 209 HG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l 245 (307)
T PRK13604 209 TANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDL 245 (307)
T ss_pred EcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCcccc
Confidence 99999998 778888888876679999999999964
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-21 Score=160.59 Aligned_cols=234 Identities=13% Similarity=0.091 Sum_probs=134.7
Q ss_pred CCCcceeecCCc-eEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHG-SLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (299)
Q Consensus 19 ~~~~~~i~~~~~-~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~ 94 (299)
+.++..++..++ .|....+.+ .+.|+||++||++.... .+|......+...||.|+++|+||+|.|.....
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~-----~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~ 241 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQT-----DYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL 241 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchh-----hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc
Confidence 345556677677 776554432 34566666655544321 124333344556799999999999999853211
Q ss_pred CCCCcccHHHHHHHHHHHHHhc---CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc-chhHHHHhhhhhh
Q 022316 95 DDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP-SWTEWLYNKVMSN 170 (299)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~ 170 (299)
.........++.+.+... +.+++.++||||||.+++.+|..+|++|+++|++++..... ....+..
T Consensus 242 ----~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~------ 311 (414)
T PRK05077 242 ----TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQ------ 311 (414)
T ss_pred ----cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhh------
Confidence 123444455666666554 45799999999999999999999999999999999875321 1111100
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhh-ccccccEEEEe
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGL-RKLQCRSLIFV 249 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~P~lii~ 249 (299)
........ .+...++.... +.+. +...+ ..+.. .....+ .++++|+|+|+
T Consensus 312 -----~~p~~~~~-~la~~lg~~~~------~~~~---l~~~l------------~~~sl--~~~~~l~~~i~~PvLiI~ 362 (414)
T PRK05077 312 -----QVPEMYLD-VLASRLGMHDA------SDEA---LRVEL------------NRYSL--KVQGLLGRRCPTPMLSGY 362 (414)
T ss_pred -----hchHHHHH-HHHHHhCCCCC------ChHH---HHHHh------------hhccc--hhhhhhccCCCCcEEEEe
Confidence 00000001 11111111100 0111 11111 10000 000111 57899999999
Q ss_pred cCCCcch--hhhHHHhhhccccCceEEEEcCch-hhhHhHHHHHHHHhhhhc
Q 022316 250 GESSPFH--SEAVHMTSKIDRRYSALVEVWTRV-YISLLGFLVLLASFCESE 298 (299)
Q Consensus 250 G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~~f~~~~~~~~~~~ 298 (299)
|++|.++ +.++.+.+..++ .+++++|++. |.-..++++.+..|+++.
T Consensus 363 G~~D~ivP~~~a~~l~~~~~~--~~l~~i~~~~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 363 WKNDPFSPEEDSRLIASSSAD--GKLLEIPFKPVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred cCCCCCCCHHHHHHHHHhCCC--CeEEEccCCCccCCHHHHHHHHHHHHHHH
Confidence 9999998 556665665644 7899999963 234455677777777654
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-21 Score=154.00 Aligned_cols=248 Identities=14% Similarity=0.106 Sum_probs=135.5
Q ss_pred eeecCCceEEEEec--cCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 24 LIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 24 ~i~~~~~~l~~~~~--g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
.+..++..+.-... ..++++++|++||+.....+.. .. |......+...||+|+++|+||||.|... ..+
T Consensus 6 ~~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~-~~-~~~la~~l~~~G~~v~~~Dl~G~G~S~~~------~~~ 77 (274)
T TIGR03100 6 TFSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSH-RQ-FVLLARRLAEAGFPVLRFDYRGMGDSEGE------NLG 77 (274)
T ss_pred EEEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCch-hH-HHHHHHHHHHCCCEEEEeCCCCCCCCCCC------CCC
Confidence 34455555543222 2234567888887654332211 11 22222334456999999999999998532 246
Q ss_pred HHHHHHHHHHHHHhc-----CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhc
Q 022316 102 VDDLADQIAEVLNHF-----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l-----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (299)
++++.+|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|+++|........... ..........
T Consensus 78 ~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~---~~~~~~~~~~ 153 (274)
T TIGR03100 78 FEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS---RIRHYYLGQL 153 (274)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH---HHHHHHHHHH
Confidence 677777777777665 56789999999999999999765 56899999999875432211110 0000000000
Q ss_pred chhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcc
Q 022316 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 255 (299)
... ....+....... -....+.+...+... .......... . ..+....+.++++|+++++|..|..
T Consensus 154 ~~~----~~~~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~l~~~~~P~ll~~g~~D~~ 220 (274)
T TIGR03100 154 LSA----DFWRKLLSGEVN------LGSSLRGLGDALLKARQKGDEVAHGG-L--AERMKAGLERFQGPVLFILSGNDLT 220 (274)
T ss_pred hCh----HHHHHhcCCCcc------HHHHHHHHHHHHHhhhhcCCCcccch-H--HHHHHHHHHhcCCcEEEEEcCcchh
Confidence 000 011111111110 011122222211100 0000000000 0 0234456778899999999999988
Q ss_pred hhhh-------HHHhhhccccCceEEEEcCchhhhHh-----HHHHHHHHhhh
Q 022316 256 HSEA-------VHMTSKIDRRYSALVEVWTRVYISLL-----GFLVLLASFCE 296 (299)
Q Consensus 256 ~~~~-------~~~~~~~~~~~~~~~~~~~~~H~~~~-----~f~~~~~~~~~ 296 (299)
.... ....+.+...+++++.+|+++|.+.. +..+.+.+|++
T Consensus 221 ~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 221 AQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 6322 33344454455899999999997733 35556666664
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-21 Score=158.48 Aligned_cols=135 Identities=13% Similarity=0.071 Sum_probs=94.0
Q ss_pred CCCCCCCCcceeecCCceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCC
Q 022316 14 ETPPPSGKDNLIKTSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFG 89 (299)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S 89 (299)
+....+.++..+-...+.+..+.+.+ ..++|||++||+..++...+... |...+..+..+||+|+++|++|+|.|
T Consensus 30 ~~~~~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~-~~~~~~~L~~~G~~V~~~D~~g~g~s 108 (350)
T TIGR01836 30 EDIEVGVTPKEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQE-DRSLVRGLLERGQDVYLIDWGYPDRA 108 (350)
T ss_pred cccccCCCCCceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCC-CchHHHHHHHCCCeEEEEeCCCCCHH
Confidence 33344455555555555444443432 23457999999866654433322 34555555667999999999999877
Q ss_pred CCCCCCCCCcccHHHHHH-----HHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 90 AAAISDDEPVLSVDDLAD-----QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~-----~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
.. ..++++++. .+..+++..+.++++++||||||.+++.+++.+|++|+++|+++++...
T Consensus 109 ~~-------~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 109 DR-------YLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred Hh-------cCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 42 245565543 3445556677889999999999999999999999999999999987765
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.5e-21 Score=147.08 Aligned_cols=230 Identities=13% Similarity=0.090 Sum_probs=146.4
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccC--ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG 117 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 117 (299)
...|+++++||+.+++.. | ..+...|++ +-.|+++|.|.||.|... ...+..++++|+..+++..+
T Consensus 50 ~~~Pp~i~lHGl~GS~~N------w-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-----~~h~~~~ma~dv~~Fi~~v~ 117 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKEN------W-RSVAKNLSRKLGRDVYAVDVRNHGSSPKI-----TVHNYEAMAEDVKLFIDGVG 117 (315)
T ss_pred CCCCceEEecccccCCCC------H-HHHHHHhcccccCceEEEecccCCCCccc-----cccCHHHHHHHHHHHHHHcc
Confidence 478999999999999855 7 444555554 679999999999999543 34779999999999999885
Q ss_pred ----CCcEEEEeeCccH-HHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcch---hHHHHHHHHhh
Q 022316 118 ----LGAVMCMGVTAGA-YILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC---GVVKELLLKRY 189 (299)
Q Consensus 118 ----~~~~~lvG~S~Gg-~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 189 (299)
..+++++|||||| .+++..+..+|+.+..+|+++.++...+.........+..+. ..... ...+......+
T Consensus 118 ~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~-~~d~~~~~~~~rke~~~~l 196 (315)
T KOG2382|consen 118 GSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMI-QLDLSIGVSRGRKEALKSL 196 (315)
T ss_pred cccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHH-hccccccccccHHHHHHHH
Confidence 5789999999999 778888889999999999999777432221111111111111 11111 00001122222
Q ss_pred hccccccCCCCCchHHHHHHHHhhhc----------ccccchHHHHHhhcCCCChhhhh--ccccccEEEEecCCCcch-
Q 022316 190 FSKEVRGNAQVPESDIVQACRRLLDE----------RQSSNVWHFLEAINGRPDISEGL--RKLQCRSLIFVGESSPFH- 256 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~lii~G~~D~~~- 256 (299)
....+ +..+.+.+...+.. .+......++..+.. ..+...+ ..-+.||+++.|.++..+
T Consensus 197 ~~~~~-------d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~-~s~~~~l~~~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 197 IEVGF-------DNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEI-LSYWADLEDGPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred HHHhc-------chHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHh-hcccccccccccccceeEEecCCCCCcC
Confidence 22111 12233333333331 112223333333211 1222222 566889999999999998
Q ss_pred -hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHH
Q 022316 257 -SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLA 292 (299)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~ 292 (299)
+...++.+.++. +++++++++||.++.|-++.+.
T Consensus 269 ~~~~~~~~~~fp~--~e~~~ld~aGHwVh~E~P~~~~ 303 (315)
T KOG2382|consen 269 DEHYPRMEKIFPN--VEVHELDEAGHWVHLEKPEEFI 303 (315)
T ss_pred hhHHHHHHHhccc--hheeecccCCceeecCCHHHHH
Confidence 445666666665 9999999999999988666554
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-20 Score=158.26 Aligned_cols=241 Identities=12% Similarity=0.014 Sum_probs=135.8
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCc
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (299)
.++|||++||+....+..+..-- ...+..+..+||+|+++|++|+|.+..... ...|..+.+.+.+..+++.++.++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~-~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~--~ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQ-NSLVRWLVEQGHTVFVISWRNPDASQADKT--FDDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccc-hHHHHHHHHCCcEEEEEECCCCCcccccCC--hhhhHHHHHHHHHHHHHHhcCCCC
Confidence 46789999998766644221110 134445556799999999999998854322 234555667777888888889999
Q ss_pred EEEEeeCccHHHHH----HHHHHc-cCcccEEEEecCCCCCcchhHH--H----HhhhhhhhHHhhcchh-HHHHH----
Q 022316 121 VMCMGVTAGAYILT----LFAMKY-RHRVLGLILVSPLCKAPSWTEW--L----YNKVMSNLLYYYGMCG-VVKEL---- 184 (299)
Q Consensus 121 ~~lvG~S~Gg~va~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~-~~~~~---- 184 (299)
++++||||||.++. .+++.+ +++|++++++++.......... + ....+.......|..+ .....
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~ 343 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSL 343 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHh
Confidence 99999999999852 345565 7899999999987765422110 0 0001111111111100 00000
Q ss_pred -----HHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCC----------CChhhhhccccccEEEEe
Q 022316 185 -----LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR----------PDISEGLRKLQCRSLIFV 249 (299)
Q Consensus 185 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~P~lii~ 249 (299)
.+...+...+...... ....+..+.......+...+..+++.+... .+....+.+|++|+++|.
T Consensus 344 lrp~~l~w~~~v~~yl~g~~~-~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~ 422 (532)
T TIGR01838 344 LRENDLIWNYYVDNYLKGKSP-VPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIA 422 (532)
T ss_pred cChhhHHHHHHHHHHhcCCCc-cchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEe
Confidence 0000000011100000 000000111111111222233333222221 123356889999999999
Q ss_pred cCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHH
Q 022316 250 GESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGF 287 (299)
Q Consensus 250 G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f 287 (299)
|++|.++ +.+..+.+.+++ .+..+++++||.+.++-
T Consensus 423 G~~D~IvP~~sa~~l~~~i~~--~~~~vL~~sGHi~~ien 460 (532)
T TIGR01838 423 TREDHIAPWQSAYRGAALLGG--PKTFVLGESGHIAGVVN 460 (532)
T ss_pred eCCCCcCCHHHHHHHHHHCCC--CEEEEECCCCCchHhhC
Confidence 9999998 556666777764 67789999999987653
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-21 Score=155.38 Aligned_cols=139 Identities=17% Similarity=0.143 Sum_probs=96.5
Q ss_pred CCCCCCcceeecCCc-eEEEEecc-------CCCCCeEEEecccccchhhhccccccCchhhh-cccCceEEEEECCCCC
Q 022316 16 PPPSGKDNLIKTSHG-SLSVTIYG-------DQDKPALVTYPDLALNYMSCFQGLFFCPEACS-LLLHNFCIYHINPPGH 86 (299)
Q Consensus 16 ~~~~~~~~~i~~~~~-~l~~~~~g-------~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~-~l~~~~~vi~~D~~G~ 86 (299)
..++.+++.+++++| .|.+.... +.++|+|+|+||++.++....... ....+.. +..+||+|+++|+||+
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~-~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNS-PEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecC-cccchHHHHHhCCCCccccccccc
Confidence 457889999999776 56655532 124679999999988775411100 0011222 3356999999999998
Q ss_pred CCCCC-----CCCCCCCcccHHHHH-HHHHHHHHhc---CCCcEEEEeeCccHHHHHHHHHHccC---cccEEEEecCCC
Q 022316 87 EFGAA-----AISDDEPVLSVDDLA-DQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLC 154 (299)
Q Consensus 87 G~S~~-----~~~~~~~~~~~~~~~-~~l~~~l~~l---~~~~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~ 154 (299)
|.|.. +.+.....+++++++ .|+.++++++ ..++++++||||||.+++.++ .+|+ +|+.+++++|..
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchh
Confidence 76532 111112247889998 7999998876 347999999999999998554 6776 688999999887
Q ss_pred CC
Q 022316 155 KA 156 (299)
Q Consensus 155 ~~ 156 (299)
..
T Consensus 198 ~~ 199 (395)
T PLN02872 198 YL 199 (395)
T ss_pred hh
Confidence 65
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-20 Score=146.08 Aligned_cols=216 Identities=11% Similarity=0.066 Sum_probs=122.2
Q ss_pred EEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC-C------cccH
Q 022316 32 LSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE-P------VLSV 102 (299)
Q Consensus 32 l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~-~------~~~~ 102 (299)
++|...+. +..|+||++||++.+... |......+...||+|+++|+||||.+....+... . ..+.
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~ 88 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLV------YSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNM 88 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccch------HHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHH
Confidence 34444432 346899999998776532 3233334445699999999999997532111000 0 0122
Q ss_pred HHHHHHHHHHHHh--cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhH
Q 022316 103 DDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (299)
Q Consensus 103 ~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (299)
+++.+.+..+.+. ++.++++++|||+||.+++.++.++|+....++++++... . . . .
T Consensus 89 ~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-~---~-~-----~----------- 147 (249)
T PRK10566 89 QEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-T---S-L-----A----------- 147 (249)
T ss_pred HHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-H---H-H-----H-----------
Confidence 3333333333332 2347899999999999999999988864444444443110 0 0 0 0
Q ss_pred HHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccc-cccEEEEecCCCcch--h
Q 022316 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFVGESSPFH--S 257 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~G~~D~~~--~ 257 (299)
. ..+...... .+.....+... ...... .+....+.++ ++|+|+++|++|.++ +
T Consensus 148 --~----~~~~~~~~~-----~~~~~~~~~~~------------~~~~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~~ 203 (249)
T PRK10566 148 --R----TLFPPLIPE-----TAAQQAEFNNI------------VAPLAE-WEVTHQLEQLADRPLLLWHGLADDVVPAA 203 (249)
T ss_pred --H----Hhccccccc-----ccccHHHHHHH------------HHHHhh-cChhhhhhhcCCCCEEEEEcCCCCcCCHH
Confidence 0 000000000 00000000000 011111 2233345565 799999999999998 6
Q ss_pred hhHHHhhhcccc----CceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 258 EAVHMTSKIDRR----YSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 258 ~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
.+.++.+.+... +++++.+++++|....+-++....|+++.
T Consensus 204 ~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~fl~~~ 248 (249)
T PRK10566 204 ESLRLQQALRERGLDKNLTCLWEPGVRHRITPEALDAGVAFFRQH 248 (249)
T ss_pred HHHHHHHHHHhcCCCcceEEEecCCCCCccCHHHHHHHHHHHHhh
Confidence 677777766432 36788899999988777888888888764
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.6e-19 Score=137.60 Aligned_cols=269 Identities=13% Similarity=0.108 Sum_probs=167.2
Q ss_pred CCceEEEEeccCC---CCCeEEEecccccchhhhcc-----ccccCchhhhc---ccCceEEEEECCCCCC-CCCCCCC-
Q 022316 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQ-----GLFFCPEACSL---LLHNFCIYHINPPGHE-FGAAAIS- 94 (299)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~-----~~~w~~~~~~~---l~~~~~vi~~D~~G~G-~S~~~~~- 94 (299)
.+..|.|+.+|.. ...+|+++|++.+++..... ..||...+-+- -.+.|.||+.|-.|.+ .|..|..
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 4458899999973 35689999999886654332 13574433221 1346999999999976 4443221
Q ss_pred --------CCCCcccHHHHHHHHHHHHHhcCCCcEE-EEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH-
Q 022316 95 --------DDEPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY- 164 (299)
Q Consensus 95 --------~~~~~~~~~~~~~~l~~~l~~l~~~~~~-lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~- 164 (299)
..++..+++|++..-..+++++|++++. +||-||||+.|++++..+|++|.+++.++++.....+.....
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~ 193 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNE 193 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHH
Confidence 1335689999999889999999999986 999999999999999999999999999999877654432111
Q ss_pred --hhhhhh--------------------hHHhhcchhHHHHHHHHhhhccccccCCCCC--chHHHHHHHH-----hhhc
Q 022316 165 --NKVMSN--------------------LLYYYGMCGVVKELLLKRYFSKEVRGNAQVP--ESDIVQACRR-----LLDE 215 (299)
Q Consensus 165 --~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~ 215 (299)
++.+.. ..+..+...+..+..+...|+.......... .....+.|.+ ....
T Consensus 194 ~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~r 273 (368)
T COG2021 194 VQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVAR 273 (368)
T ss_pred HHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhc
Confidence 111100 0001111111112222333333211110000 0112222222 2334
Q ss_pred ccccchHHHHHhhcC------CCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhH-
Q 022316 216 RQSSNVWHFLEAING------RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLG- 286 (299)
Q Consensus 216 ~~~~~~~~~~~~~~~------~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~- 286 (299)
.+...+....+.+.. +.++.+.+++|++|++++.-+.|.+. +..+++.+.++....-.+.-...||..++.
T Consensus 274 fDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e 353 (368)
T COG2021 274 FDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVE 353 (368)
T ss_pred cCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcc
Confidence 566677666666443 23445569999999999999999997 778888888876433234445689988763
Q ss_pred ---HHHHHHHhhh
Q 022316 287 ---FLVLLASFCE 296 (299)
Q Consensus 287 ---f~~~~~~~~~ 296 (299)
+...+..|++
T Consensus 354 ~~~~~~~i~~fL~ 366 (368)
T COG2021 354 SEAVGPLIRKFLA 366 (368)
T ss_pred hhhhhHHHHHHhh
Confidence 3355566664
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-19 Score=134.10 Aligned_cols=89 Identities=15% Similarity=0.151 Sum_probs=72.4
Q ss_pred CeEEEecccccchhhhccccccCc-hhhhccc---CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCP-EACSLLL---HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~-~~~~~l~---~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
|+|||+||++++..+ |.. .+...+. .+|+|+++|+||+| ++.++++.++++.++.
T Consensus 2 p~illlHGf~ss~~~------~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~ 60 (190)
T PRK11071 2 STLLYLHGFNSSPRS------AKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGG 60 (190)
T ss_pred CeEEEECCCCCCcch------HHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCC
Confidence 689999999998866 432 2234333 37999999999983 3578899999999999
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
++++++||||||.+++.+|.++|. ++|+++|+..
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred CCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 999999999999999999999983 4688888654
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-18 Score=136.88 Aligned_cols=253 Identities=18% Similarity=0.199 Sum_probs=141.1
Q ss_pred CCceEEEEeccCCCCCeEEEecccccchhhhccccccCch--hhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHH
Q 022316 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPE--ACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (299)
Q Consensus 28 ~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~--~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (299)
....+.|...+.. +|+++++||++.+... |... ........|+|+++|+||||.|. .. .++...+
T Consensus 8 ~~~~~~~~~~~~~-~~~i~~~hg~~~~~~~------~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-----~~~~~~~ 74 (282)
T COG0596 8 DGVRLAYREAGGG-GPPLVLLHGFPGSSSV------WRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-----GYSLSAY 74 (282)
T ss_pred CCeEEEEeecCCC-CCeEEEeCCCCCchhh------hHHHHHHhhccccceEEEEecccCCCCCC-cc-----cccHHHH
Confidence 4446667776644 6689999999988755 3231 11111112999999999999985 11 2455556
Q ss_pred HHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH------H-HHhhhhhhhHHhhcch
Q 022316 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE------W-LYNKVMSNLLYYYGMC 178 (299)
Q Consensus 106 ~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~ 178 (299)
++++..+++.++..+++++||||||.+++.++.++|++++++|++++......... . ................
T Consensus 75 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T COG0596 75 ADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAA 154 (282)
T ss_pred HHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchh
Confidence 99999999999999999999999999999999999999999999998764110000 0 0000000000000000
Q ss_pred hHHHHHHHHh-hhcccccc----CCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCC
Q 022316 179 GVVKELLLKR-YFSKEVRG----NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (299)
Q Consensus 179 ~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D 253 (299)
... ...... ++...... .................................. ........++++|+++++|++|
T Consensus 155 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~d 232 (282)
T COG0596 155 AFA-ALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLD-RDLRAALARITVPTLIIHGEDD 232 (282)
T ss_pred hhh-hhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccc-cccchhhccCCCCeEEEecCCC
Confidence 000 000000 00000000 0000000000111100000000011111111111 1233456788999999999999
Q ss_pred cchhh--hHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 254 PFHSE--AVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 254 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.+... ...+.+.++. ...+++++++||....+..+.++..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~ 276 (282)
T COG0596 233 PVVPAELARRLAAALPN-DARLVVIPGAGHFPHLEAPEAFAAALL 276 (282)
T ss_pred CcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHHHHHHHHH
Confidence 55422 4455555543 478999999999999988876655444
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.4e-20 Score=136.58 Aligned_cols=123 Identities=15% Similarity=0.177 Sum_probs=91.9
Q ss_pred cceeecCCce--EEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCCCC
Q 022316 22 DNLIKTSHGS--LSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 22 ~~~i~~~~~~--l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
+..++.++.. +..+..++ ..+|.++++||.|.++.+ |.....++..+ ..+|+++|+||||+|....
T Consensus 50 kedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LS------fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~--- 120 (343)
T KOG2564|consen 50 KEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALS------FAIFASELKSKIRCRCLALDLRGHGETKVEN--- 120 (343)
T ss_pred ccccccCCCcceEEEEEecCCCCCccEEEEeecCcccchh------HHHHHHHHHhhcceeEEEeeccccCccccCC---
Confidence 3455565554 44444443 468999999999999877 64444444443 6788999999999996533
Q ss_pred CCcccHHHHHHHHHHHHHhcC---CCcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCC
Q 022316 97 EPVLSVDDLADQIAEVLNHFG---LGAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLC 154 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~---~~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~ 154 (299)
....+.+.+++|+.++++.+= ..+++||||||||.||...|.. -|. +.++++++-.-
T Consensus 121 e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVE 182 (343)
T KOG2564|consen 121 EDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVE 182 (343)
T ss_pred hhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEec
Confidence 345899999999999998863 3679999999999999988764 365 89999998644
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=159.91 Aligned_cols=104 Identities=9% Similarity=0.015 Sum_probs=76.3
Q ss_pred CCCeEEEecccccchhhhccccccCch-----hhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPE-----ACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~-----~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (299)
.+|||||+||++.+... |... +..+...||+|+++|+ |.++.+. .....++.+++..+.+.++.
T Consensus 66 ~~~plllvhg~~~~~~~------~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~--~~~~~~l~~~i~~l~~~l~~ 134 (994)
T PRK07868 66 VGPPVLMVHPMMMSADM------WDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVE--GGMERNLADHVVALSEAIDT 134 (994)
T ss_pred CCCcEEEECCCCCCccc------eecCCcccHHHHHHHCCCEEEEEcC---CCCChhH--cCccCCHHHHHHHHHHHHHH
Confidence 56899999999888754 6432 3334467999999995 5564321 11236777877777666654
Q ss_pred ---cCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCC
Q 022316 116 ---FGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCK 155 (299)
Q Consensus 116 ---l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~ 155 (299)
+..++++++||||||.+++.+|+.+ +++|+++|+++++..
T Consensus 135 v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 135 VKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred HHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 3457899999999999999998755 568999999888754
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-19 Score=138.99 Aligned_cols=129 Identities=16% Similarity=0.151 Sum_probs=91.9
Q ss_pred ceeecCCceEEEEeccCC---CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 23 NLIKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
.+++.+.+.+....+.+. ..|+|||+||++.+... .. ..|...+..+...||+|+++|+||||.|..... .
T Consensus 3 ~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~-~~-~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~----~ 76 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNK-SR-RMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA----A 76 (266)
T ss_pred EEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccc-hh-HHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc----c
Confidence 456667776655444332 24689999998764321 11 124333334445799999999999999964322 3
Q ss_pred ccHHHHHHHHHHH---HHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 100 LSVDDLADQIAEV---LNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 100 ~~~~~~~~~l~~~---l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
.+++++++|+..+ ++..+.++++|+||||||.+++.+|.++|++++++|+++|.....
T Consensus 77 ~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 77 ARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 5777788877664 455567899999999999999999999999999999999876543
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.1e-18 Score=120.93 Aligned_cols=143 Identities=19% Similarity=0.236 Sum_probs=103.4
Q ss_pred eEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEE
Q 022316 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMC 123 (299)
Q Consensus 44 ~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~l 123 (299)
+||++||++.+... |......+...||.|+++|+||+|.+.. ....+++.+++. .+..+.+++.+
T Consensus 1 ~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~i~l 65 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD------YQPLAEALAEQGYAVVAFDYPGHGDSDG-------ADAVERVLADIR--AGYPDPDRIIL 65 (145)
T ss_dssp EEEEECTTTTTTHH------HHHHHHHHHHTTEEEEEESCTTSTTSHH-------SHHHHHHHHHHH--HHHCTCCEEEE
T ss_pred CEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEEecCCCCccch-------hHHHHHHHHHHH--hhcCCCCcEEE
Confidence 58999999987544 3344455666799999999999987721 123333333333 11236689999
Q ss_pred EeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCch
Q 022316 124 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPES 203 (299)
Q Consensus 124 vG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (299)
+|||+||.+++.++.+. .+|+++|++++.+ .
T Consensus 66 ~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~---~--------------------------------------------- 96 (145)
T PF12695_consen 66 IGHSMGGAIAANLAARN-PRVKAVVLLSPYP---D--------------------------------------------- 96 (145)
T ss_dssp EEETHHHHHHHHHHHHS-TTESEEEEESESS---G---------------------------------------------
T ss_pred EEEccCcHHHHHHhhhc-cceeEEEEecCcc---c---------------------------------------------
Confidence 99999999999999988 7899999999820 0
Q ss_pred HHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchh
Q 022316 204 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVY 281 (299)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H 281 (299)
.+.+.+.++|+++++|++|..+ +..+++.+.++ ...+++++++++|
T Consensus 97 -------------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H 144 (145)
T PF12695_consen 97 -------------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGH 144 (145)
T ss_dssp -------------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-T
T ss_pred -------------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcC
Confidence 0001233449999999999997 67777788887 4589999999999
Q ss_pred h
Q 022316 282 I 282 (299)
Q Consensus 282 ~ 282 (299)
.
T Consensus 145 ~ 145 (145)
T PF12695_consen 145 F 145 (145)
T ss_dssp T
T ss_pred c
Confidence 4
|
... |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.9e-17 Score=128.26 Aligned_cols=261 Identities=14% Similarity=0.135 Sum_probs=148.7
Q ss_pred CCCCCcceeec-CCceEEEEec--cC-------CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCC
Q 022316 17 PPSGKDNLIKT-SHGSLSVTIY--GD-------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH 86 (299)
Q Consensus 17 ~~~~~~~~i~~-~~~~l~~~~~--g~-------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~ 86 (299)
....+...+++ +||.+.+-.. +. ...|.+|++||+.+++...+.. ..+.++..+||+|++++.||+
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr----~lv~~a~~~G~r~VVfN~RG~ 165 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVR----HLVHEAQRKGYRVVVFNHRGL 165 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHH----HHHHHHHhCCcEEEEECCCCC
Confidence 45556677777 5556655543 21 2458999999998877663322 233455667999999999999
Q ss_pred CCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC---cccEEEEecCCCCC--cchhH
Q 022316 87 EFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKA--PSWTE 161 (299)
Q Consensus 87 G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~~~--~~~~~ 161 (299)
|.|.-..+.-+.....+|+.+.+..+-+.....++..+|.||||++...|..+-.+ .+.++.+.+|.-.. .....
T Consensus 166 ~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~ 245 (409)
T KOG1838|consen 166 GGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIE 245 (409)
T ss_pred CCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHh
Confidence 98876666555666778888888888888888899999999999999999886543 34444444443322 11111
Q ss_pred HHH-hhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcc
Q 022316 162 WLY-NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240 (299)
Q Consensus 162 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (299)
+.. +......+ ..++...... -..-++.......... ....++++.+.+.. ...++... ..+..+.+....+++
T Consensus 246 ~~~~~~~y~~~l-~~~l~~~~~~-~r~~~~~~~vd~d~~~-~~~SvreFD~~~t~-~~~gf~~~-deYY~~aSs~~~v~~ 320 (409)
T KOG1838|consen 246 TPLYRRFYNRAL-TLNLKRIVLR-HRHTLFEDPVDFDVIL-KSRSVREFDEALTR-PMFGFKSV-DEYYKKASSSNYVDK 320 (409)
T ss_pred cccchHHHHHHH-HHhHHHHHhh-hhhhhhhccchhhhhh-hcCcHHHHHhhhhh-hhcCCCcH-HHHHhhcchhhhccc
Confidence 110 11111110 0111111100 0000111110000000 01111122221111 11122222 222233566677999
Q ss_pred ccccEEEEecCCCcch-hhhHHHhhhccccCceEEEEcCchhhhHhH
Q 022316 241 LQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLLG 286 (299)
Q Consensus 241 i~~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 286 (299)
|++|+|.|++.+|+++ +.+....+...++++.+++-...||.-.+|
T Consensus 321 I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfle 367 (409)
T KOG1838|consen 321 IKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLE 367 (409)
T ss_pred ccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeec
Confidence 9999999999999998 444444444455568888989999976554
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.3e-16 Score=119.00 Aligned_cols=113 Identities=18% Similarity=0.261 Sum_probs=91.4
Q ss_pred EEEeccCCCCC--eEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHH
Q 022316 33 SVTIYGDQDKP--ALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (299)
Q Consensus 33 ~~~~~g~~~~p--~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 109 (299)
.|....+.+.| +||-+||.++++.+ + +.+.+.|. .|.|+|.+++||+|.+... ....++-.+-..-+
T Consensus 24 ~y~D~~~~gs~~gTVv~~hGsPGSH~D------F-kYi~~~l~~~~iR~I~iN~PGf~~t~~~---~~~~~~n~er~~~~ 93 (297)
T PF06342_consen 24 VYEDSLPSGSPLGTVVAFHGSPGSHND------F-KYIRPPLDEAGIRFIGINYPGFGFTPGY---PDQQYTNEERQNFV 93 (297)
T ss_pred EEEecCCCCCCceeEEEecCCCCCccc------h-hhhhhHHHHcCeEEEEeCCCCCCCCCCC---cccccChHHHHHHH
Confidence 35555544444 79999999999966 3 44455554 5999999999999988642 23458889999999
Q ss_pred HHHHHhcCC-CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 110 AEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 110 ~~~l~~l~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
.++++.+++ +++..+|||.|+-.|+.+|..+| +.++++++|+...+
T Consensus 94 ~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 94 NALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRP 140 (297)
T ss_pred HHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcccc
Confidence 999999999 57889999999999999999996 67999999987654
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-16 Score=121.19 Aligned_cols=257 Identities=13% Similarity=0.091 Sum_probs=132.9
Q ss_pred CcceeecCCc-eEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 21 KDNLIKTSHG-SLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 21 ~~~~i~~~~~-~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
+...+++++| .+......+ ...|.+|++||+.+++.+.+... .+..+..+||.|++++.|||+.+....+.-
T Consensus 50 ~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~----L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~ 125 (345)
T COG0429 50 TRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARG----LMRALSRRGWLVVVFHFRGCSGEANTSPRL 125 (345)
T ss_pred ceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHH----HHHHHHhcCCeEEEEecccccCCcccCcce
Confidence 3446677554 333333322 46789999999988876643322 223344569999999999999876544433
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccH-HHHHHHHHHccC-cccEEEEecCCCCCcchhHHHHhhhhhhhHHh
Q 022316 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGA-YILTLFAMKYRH-RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg-~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
......+|++.-+..+.+.....++..+|.|+|| +++..++.+--+ .+.+.+.++.+................ .+..
T Consensus 126 yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~-~ly~ 204 (345)
T COG0429 126 YHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSL-RLYS 204 (345)
T ss_pred ecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhh-hhhH
Confidence 3333445655555555555566899999999999 455555443322 356666665544331111100000000 0000
Q ss_pred hcchhHHHHHHHHhhhccccccCCCCCc-hHHHHHHHHhhh--c---ccccchHHHHHhhcCCCChhhhhccccccEEEE
Q 022316 175 YGMCGVVKELLLKRYFSKEVRGNAQVPE-SDIVQACRRLLD--E---RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 248 (299)
.-+...+.+.+..++ .. .....+ .+ .+.++.++.... . .+..++....+.+.. ......+++|.+|+|||
T Consensus 205 r~l~~~L~~~~~~kl-~~-l~~~~p-~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~-aSs~~~L~~Ir~PtLii 280 (345)
T COG0429 205 RYLLRNLKRNAARKL-KE-LEPSLP-GTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQ-ASSLPLLPKIRKPTLII 280 (345)
T ss_pred HHHHHHHHHHHHHHH-Hh-cCcccC-cHHHHHHHhhchHHhccceeeecccCCCcHHHHHHh-ccccccccccccceEEE
Confidence 000011101010100 00 000000 01 122222222111 1 133344444444433 45556789999999999
Q ss_pred ecCCCcch-hhhHHHhhhccccCceEEEEcCchhhhHhH
Q 022316 249 VGESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLLG 286 (299)
Q Consensus 249 ~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 286 (299)
++.+|+++ .....-.....+..+.+.+.+..||.-.++
T Consensus 281 ~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 281 NAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred ecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEecc
Confidence 99999998 323222222123448888888999976554
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-15 Score=121.45 Aligned_cols=215 Identities=10% Similarity=0.082 Sum_probs=123.5
Q ss_pred CCceEEEEeccC-----CCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCC-----CCC-----
Q 022316 28 SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEF-----GAA----- 91 (299)
Q Consensus 28 ~~~~l~~~~~g~-----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~-----S~~----- 91 (299)
-+..+.|.++=| .+.|+|+|+||++.+...... + ..+...+. .|+.|+.+|.+++|. +..
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~---~-~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~ 103 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQ---K-SGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGV 103 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHH---h-hhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCC
Confidence 345677776633 246899999998876533110 1 11123333 499999999887761 100
Q ss_pred --------CCCC----CCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch
Q 022316 92 --------AISD----DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159 (299)
Q Consensus 92 --------~~~~----~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~ 159 (299)
..+. ....+-.+++.+.+....+.++.++++|+||||||..|+.++.++|+++++++.+++.......
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~ 183 (283)
T PLN02442 104 GAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINC 183 (283)
T ss_pred CcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccC
Confidence 0000 0001223444455555555667789999999999999999999999999999999987543211
Q ss_pred hHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhc
Q 022316 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 239 (299)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
. +.. . .+...++.. ++. +.. . ........+.
T Consensus 184 ~-~~~------------------~-~~~~~~g~~---------~~~---~~~----~-------------d~~~~~~~~~ 214 (283)
T PLN02442 184 P-WGQ------------------K-AFTNYLGSD---------KAD---WEE----Y-------------DATELVSKFN 214 (283)
T ss_pred c-hhh------------------H-HHHHHcCCC---------hhh---HHH----c-------------Chhhhhhhcc
Confidence 0 000 0 011111111 110 000 0 0012222344
Q ss_pred cccccEEEEecCCCcchh---hhHHHhhhc--cccCceEEEEcCchhhhH--hHHHHHHHHhh
Q 022316 240 KLQCRSLIFVGESSPFHS---EAVHMTSKI--DRRYSALVEVWTRVYISL--LGFLVLLASFC 295 (299)
Q Consensus 240 ~i~~P~lii~G~~D~~~~---~~~~~~~~~--~~~~~~~~~~~~~~H~~~--~~f~~~~~~~~ 295 (299)
+.++|+++++|++|.+++ .++.+.+.+ .+..++++++|+.+|... ..|++..-.|.
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~~~~~i~~~~~~~ 277 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFFIATFIDDHINHH 277 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHHHHHHHHHHHHHH
Confidence 568899999999998873 234444433 223488999999999754 33444433443
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.7e-16 Score=121.64 Aligned_cols=124 Identities=10% Similarity=0.088 Sum_probs=82.2
Q ss_pred CCceEEEEeccCC-----CCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECC--CCCCCCCCCC------
Q 022316 28 SHGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINP--PGHEFGAAAI------ 93 (299)
Q Consensus 28 ~~~~l~~~~~g~~-----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~--~G~G~S~~~~------ 93 (299)
-+..+.|.++.|+ +.|+|+|+||++.+.... .+...+..++. .|+.|+++|. +|+|.+....
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~----~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~ 98 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENF----MIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGK 98 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHH----HhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccC
Confidence 3445566666542 468999999998776441 11112223333 4899999998 5554322100
Q ss_pred ----------CCCCCcccHH-HHHHHHHHHHHh---cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 94 ----------SDDEPVLSVD-DLADQIAEVLNH---FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 94 ----------~~~~~~~~~~-~~~~~l~~~l~~---l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
.+....++.. .+++++..+++. ++.+++.++||||||.+++.++.++|+.+++++++++...
T Consensus 99 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 99 GAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred CccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 0000112333 346788887776 3457899999999999999999999999999999988754
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.8e-16 Score=116.33 Aligned_cols=204 Identities=17% Similarity=0.135 Sum_probs=127.9
Q ss_pred cceeecCCceEEEEecc--CCC-CCeEEEecccccchhhhccccccCchhhhcccC--ceEEEEECCCCCCCCCCCCCCC
Q 022316 22 DNLIKTSHGSLSVTIYG--DQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g--~~~-~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
-..+.+..|..-+..+- +.. .+++++.||....-.. . . .. ...++. +++|+++|++|+|.|.....
T Consensus 37 v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq----~-~-~~-~~~l~~~ln~nv~~~DYSGyG~S~G~ps-- 107 (258)
T KOG1552|consen 37 VFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQ----M-V-EL-FKELSIFLNCNVVSYDYSGYGRSSGKPS-- 107 (258)
T ss_pred eEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchHH----H-H-HH-HHHHhhcccceEEEEecccccccCCCcc--
Confidence 34556655544333322 223 4799999997443321 1 0 11 122333 89999999999999975322
Q ss_pred CCcccHHHHHHHHHHHHHhcC-CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhh
Q 022316 97 EPVLSVDDLADQIAEVLNHFG-LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~-~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (299)
.....+|.-...+.+.+..| .+++.|+|+|+|...++.+|++.| +.++|+.+|....-..
T Consensus 108 -E~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv---------------- 168 (258)
T KOG1552|consen 108 -ERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRV---------------- 168 (258)
T ss_pred -cccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhh----------------
Confidence 22223333222233334443 588999999999999999999998 9999999984421100
Q ss_pred cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcc
Q 022316 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 255 (299)
+....... +. .+.....+.++.|+||+|+++|++|.+
T Consensus 169 ---------~~~~~~~~-~~---------------------------------~d~f~~i~kI~~i~~PVLiiHgtdDev 205 (258)
T KOG1552|consen 169 ---------AFPDTKTT-YC---------------------------------FDAFPNIEKISKITCPVLIIHGTDDEV 205 (258)
T ss_pred ---------hccCcceE-Ee---------------------------------eccccccCcceeccCCEEEEecccCce
Confidence 00000000 00 000111345678999999999999999
Q ss_pred h--hhhHHHhhhccccCceEEEEcCchhhhH---hHHHHHHHHhhhh
Q 022316 256 H--SEAVHMTSKIDRRYSALVEVWTRVYISL---LGFLVLLASFCES 297 (299)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~---~~f~~~~~~~~~~ 297 (299)
+ ....++.++.... .+...+.++||.-+ -++++.+..|+..
T Consensus 206 v~~sHg~~Lye~~k~~-~epl~v~g~gH~~~~~~~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 206 VDFSHGKALYERCKEK-VEPLWVKGAGHNDIELYPEYIEHLRRFISS 251 (258)
T ss_pred ecccccHHHHHhcccc-CCCcEEecCCCcccccCHHHHHHHHHHHHH
Confidence 8 7788888887654 67788899999655 3677887777654
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=130.60 Aligned_cols=109 Identities=11% Similarity=0.120 Sum_probs=80.6
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhc-c--cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSL-L--LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF 116 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~-l--~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l 116 (299)
+.+|++|++||++.++.. .. |.+.+... + ..+++||++|++|+|.|..+.. ......+++++.++++.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~---~~-w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a----~~~t~~vg~~la~lI~~L 110 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMF---ES-WVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS----AAYTKLVGKDVAKFVNWM 110 (442)
T ss_pred CCCCeEEEECCCCcCCcc---hh-hHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc----cccHHHHHHHHHHHHHHH
Confidence 367899999999875411 11 44433433 3 2369999999999998753221 133466667777777654
Q ss_pred ------CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 117 ------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 117 ------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
++++++||||||||.+|..++.++|++|.++++++|+.+.
T Consensus 111 ~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 111 QEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred HHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 3689999999999999999999999999999999997653
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.4e-16 Score=112.56 Aligned_cols=195 Identities=14% Similarity=0.110 Sum_probs=122.2
Q ss_pred eeecC-CceEE-EEeccCCCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 24 LIKTS-HGSLS-VTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 24 ~i~~~-~~~l~-~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
.+.+. ..+|+ |........|+++.+|+-.+|-.- .. +.+.-... -+..|+.+++||+|.|... .
T Consensus 58 ~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGh---r~---~i~~~fy~~l~mnv~ivsYRGYG~S~Gs-------p 124 (300)
T KOG4391|consen 58 ELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGH---RL---PIARVFYVNLKMNVLIVSYRGYGKSEGS-------P 124 (300)
T ss_pred EEEcCcceeEeeeeecccCCCceEEEEccCCCcccc---hh---hHHHHHHHHcCceEEEEEeeccccCCCC-------c
Confidence 34443 33553 333344578999999987766411 11 22112222 2789999999999999643 2
Q ss_pred cHHHHHHHHHHHHHhc------CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHh
Q 022316 101 SVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
+-+.+.-|-+++++++ ...+++|.|-|+||++|+.+|+++.+++.++++-+.....+......
T Consensus 125 sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~----------- 193 (300)
T KOG4391|consen 125 SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPL----------- 193 (300)
T ss_pred cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhe-----------
Confidence 2233333334444443 33689999999999999999999999999999988755443211100
Q ss_pred hcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCc
Q 022316 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 254 (299)
...+. -..+..+.-++ .+.....+.+.+.|.|+|.|..|.
T Consensus 194 --v~p~~-~k~i~~lc~kn-------------------------------------~~~S~~ki~~~~~P~LFiSGlkDe 233 (300)
T KOG4391|consen 194 --VFPFP-MKYIPLLCYKN-------------------------------------KWLSYRKIGQCRMPFLFISGLKDE 233 (300)
T ss_pred --eccch-hhHHHHHHHHh-------------------------------------hhcchhhhccccCceEEeecCccc
Confidence 00000 00111111100 011122345678899999999999
Q ss_pred ch--hhhHHHhhhccccCceEEEEcCchhh
Q 022316 255 FH--SEAVHMTSKIDRRYSALVEVWTRVYI 282 (299)
Q Consensus 255 ~~--~~~~~~~~~~~~~~~~~~~~~~~~H~ 282 (299)
++ ...+++.+..++...++.++|++.|.
T Consensus 234 lVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHN 263 (300)
T KOG4391|consen 234 LVPPVMMRQLYELCPSRTKRLAEFPDGTHN 263 (300)
T ss_pred cCCcHHHHHHHHhCchhhhhheeCCCCccC
Confidence 99 66778888888888999999999995
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-14 Score=107.43 Aligned_cols=215 Identities=14% Similarity=0.063 Sum_probs=125.2
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHH-hcCCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN-HFGLG 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~-~l~~~ 119 (299)
.++.++++|-.|++... + +.....+.....++++++||+|.--... ...+++++++.+...+. -..-+
T Consensus 6 ~~~~L~cfP~AGGsa~~------f-r~W~~~lp~~iel~avqlPGR~~r~~ep----~~~di~~Lad~la~el~~~~~d~ 74 (244)
T COG3208 6 ARLRLFCFPHAGGSASL------F-RSWSRRLPADIELLAVQLPGRGDRFGEP----LLTDIESLADELANELLPPLLDA 74 (244)
T ss_pred CCceEEEecCCCCCHHH------H-HHHHhhCCchhheeeecCCCcccccCCc----ccccHHHHHHHHHHHhccccCCC
Confidence 45667888665555433 1 2224456668999999999998543221 25789999999998888 34447
Q ss_pred cEEEEeeCccHHHHHHHHHHccC---cccEEEEecCCCCCcchhH----HHHhhhhhhhHHhhcchhHHHHHHHHhhhcc
Q 022316 120 AVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTE----WLYNKVMSNLLYYYGMCGVVKELLLKRYFSK 192 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (299)
++.++||||||++|.++|.+... .+..+.+.++..+...... ......+..+....|++..
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e------------ 142 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPE------------ 142 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChH------------
Confidence 89999999999999999986532 2566666665444211100 0001111121122222211
Q ss_pred ccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccC
Q 022316 193 EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRY 270 (299)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~ 270 (299)
... ++++.+.+...++.. ......+ .... -..++||+.++.|++|..+ +....+.+... +.
T Consensus 143 -~le-----d~El~~l~LPilRAD-----~~~~e~Y----~~~~-~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~ 205 (244)
T COG3208 143 -LLE-----DPELMALFLPILRAD-----FRALESY----RYPP-PAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GD 205 (244)
T ss_pred -Hhc-----CHHHHHHHHHHHHHH-----HHHhccc----ccCC-CCCcCcceEEeccCcchhccHHHHHHHHHhhc-CC
Confidence 111 345544444433221 0111111 1111 2578999999999999998 33443444443 34
Q ss_pred ceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 271 SALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 271 ~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.++..++| ||.-+.+-.+.+..+++
T Consensus 206 f~l~~fdG-gHFfl~~~~~~v~~~i~ 230 (244)
T COG3208 206 FTLRVFDG-GHFFLNQQREEVLARLE 230 (244)
T ss_pred ceEEEecC-cceehhhhHHHHHHHHH
Confidence 78888875 68888766655555444
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4e-15 Score=114.56 Aligned_cols=174 Identities=11% Similarity=-0.027 Sum_probs=106.9
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCC----C---CCCCCccc---HHHHHHH
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAA----I---SDDEPVLS---VDDLADQ 108 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~----~---~~~~~~~~---~~~~~~~ 108 (299)
+..|+|||+||+|.+... |.+. .+.+. .++.+..++.+|...+... . ........ +.+..+.
T Consensus 14 ~~~~~vIlLHG~G~~~~~------~~~l-~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~ 86 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVA------MGEI-GSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPT 86 (232)
T ss_pred CCCcEEEEEeCCCCChHH------HHHH-HHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHH
Confidence 456789999999999865 4333 33343 3444444445554321100 0 00000111 2222222
Q ss_pred ----HHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHH
Q 022316 109 ----IAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (299)
Q Consensus 109 ----l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
+..+.+..++ ++++|+|+|+||.+++.++.++|+.+.+++.+++...
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------------------------- 139 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------------------------- 139 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc---------------------------
Confidence 2333334444 5899999999999999999999988777776654110
Q ss_pred HHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhH
Q 022316 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 260 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~ 260 (299)
.. +. ....++|+++++|++|.++ +.++
T Consensus 140 ----------~~--------~~---------------------------------~~~~~~pvli~hG~~D~vvp~~~~~ 168 (232)
T PRK11460 140 ----------SL--------PE---------------------------------TAPTATTIHLIHGGEDPVIDVAHAV 168 (232)
T ss_pred ----------cc--------cc---------------------------------cccCCCcEEEEecCCCCccCHHHHH
Confidence 00 00 0012579999999999998 5666
Q ss_pred HHhhhcc--ccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 261 HMTSKID--RRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 261 ~~~~~~~--~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
++.+.+. +.+++++++|+++|..-.+-++...+|+++.
T Consensus 169 ~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~ 208 (232)
T PRK11460 169 AAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYT 208 (232)
T ss_pred HHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 6666553 2347888999999998888777777777654
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.1e-15 Score=113.07 Aligned_cols=182 Identities=14% Similarity=0.101 Sum_probs=107.9
Q ss_pred cccCceEEEEECCCCCCCCCCC----CCCCCCcccHHHHHHHHHHHHHhcC--CCcEEEEeeCccHHHHHHHHHHccCcc
Q 022316 71 LLLHNFCIYHINPPGHEFGAAA----ISDDEPVLSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRV 144 (299)
Q Consensus 71 ~l~~~~~vi~~D~~G~G~S~~~----~~~~~~~~~~~~~~~~l~~~l~~l~--~~~~~lvG~S~Gg~va~~~a~~~p~~v 144 (299)
+..+||.|+.+|+||.+..... .........++|..+.+..+++... .+++.++|+|+||.+++.++.++|+++
T Consensus 10 la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f 89 (213)
T PF00326_consen 10 LASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRF 89 (213)
T ss_dssp HHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGS
T ss_pred HHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceee
Confidence 3377999999999998732211 0111223455666666666655543 378999999999999999999999999
Q ss_pred cEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHH
Q 022316 145 LGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHF 224 (299)
Q Consensus 145 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
+++|..++............. ........ +..... +++..+....
T Consensus 90 ~a~v~~~g~~d~~~~~~~~~~--------------~~~~~~~~--~~~~~~------~~~~~~~~s~------------- 134 (213)
T PF00326_consen 90 KAAVAGAGVSDLFSYYGTTDI--------------YTKAEYLE--YGDPWD------NPEFYRELSP------------- 134 (213)
T ss_dssp SEEEEESE-SSTTCSBHHTCC--------------HHHGHHHH--HSSTTT------SHHHHHHHHH-------------
T ss_pred eeeeccceecchhcccccccc--------------cccccccc--cCccch------hhhhhhhhcc-------------
Confidence 999999987655432221100 00000000 000000 0111111111
Q ss_pred HHhhcCCCChhhhhcc--ccccEEEEecCCCcch--hhhHHHhhhcc--ccCceEEEEcCchhhhH-----hHHHHHHHH
Q 022316 225 LEAINGRPDISEGLRK--LQCRSLIFVGESSPFH--SEAVHMTSKID--RRYSALVEVWTRVYISL-----LGFLVLLAS 293 (299)
Q Consensus 225 ~~~~~~~~~~~~~~~~--i~~P~lii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~~-----~~f~~~~~~ 293 (299)
...+.+ +++|+|+++|++|..| +.+.++.+.+. +..++++++|+++|... .++.+.+-.
T Consensus 135 ----------~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~ 204 (213)
T PF00326_consen 135 ----------ISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILD 204 (213)
T ss_dssp ----------GGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHH
T ss_pred ----------ccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHH
Confidence 111223 7899999999999998 66777776653 33489999999999332 456666666
Q ss_pred hhhh
Q 022316 294 FCES 297 (299)
Q Consensus 294 ~~~~ 297 (299)
|+++
T Consensus 205 f~~~ 208 (213)
T PF00326_consen 205 FFDK 208 (213)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6665
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.6e-15 Score=128.46 Aligned_cols=229 Identities=16% Similarity=0.108 Sum_probs=137.1
Q ss_pred CCCcceeecCCc-eEEEEeccCC--C----CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCC
Q 022316 19 SGKDNLIKTSHG-SLSVTIYGDQ--D----KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 19 ~~~~~~i~~~~~-~l~~~~~g~~--~----~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~ 91 (299)
..+...++..+| +++.....+. + -|+||++||.+....+ ..+ ...+..+...||.|+.++.||.+.-..
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~--~~~--~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVG--YSF--NPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccc--ccc--chhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 344556666555 8877766542 1 2799999999854433 222 244456667899999999998653211
Q ss_pred ---C-CCCCCCcccHHHHHHHHHHHHHhcCC---CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH
Q 022316 92 ---A-ISDDEPVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (299)
Q Consensus 92 ---~-~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (299)
. ...+......+|+.+.+. +++..+. +++.+.|+|+||+.++..+.+.| ++++.+...+...-. ...
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~---~~~- 513 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWL---LYF- 513 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhh---hhc-
Confidence 1 111223456777777777 5555554 58999999999999999998888 677776665533210 000
Q ss_pred hhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccccc
Q 022316 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 244 (299)
... ....++........ .....+. +.. ........+|++|
T Consensus 514 -----------~~~------~~~~~~~~~~~~~~---~~~~~~~-------------------~~~-~sp~~~~~~i~~P 553 (620)
T COG1506 514 -----------GES------TEGLRFDPEENGGG---PPEDREK-------------------YED-RSPIFYADNIKTP 553 (620)
T ss_pred -----------ccc------chhhcCCHHHhCCC---cccChHH-------------------HHh-cChhhhhcccCCC
Confidence 000 00000000000000 0000000 001 2333446789999
Q ss_pred EEEEecCCCcch--hhhHHHhhhcc--ccCceEEEEcCchhhhHh-----HHHHHHHHhhhh
Q 022316 245 SLIFVGESSPFH--SEAVHMTSKID--RRYSALVEVWTRVYISLL-----GFLVLLASFCES 297 (299)
Q Consensus 245 ~lii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~-----~f~~~~~~~~~~ 297 (299)
+|+|||+.|..+ +.+.++.+.+. +..++++++|+.+|.... ..++++..|+++
T Consensus 554 ~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 554 LLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKR 615 (620)
T ss_pred EEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHH
Confidence 999999999998 77888877763 456899999999996543 345555555543
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.8e-14 Score=114.27 Aligned_cols=229 Identities=12% Similarity=0.107 Sum_probs=117.1
Q ss_pred CCcceeecCCceEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhh-cccCceEEEEECCCCCCCCCCCCCC
Q 022316 20 GKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACS-LLLHNFCIYHINPPGHEFGAAAISD 95 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~-~l~~~~~vi~~D~~G~G~S~~~~~~ 95 (299)
.++..|+..+..|....+-+ ...|+||++ .|.......+| ..+.. +...|+.++++|.||.|.|.....
T Consensus 165 i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~-----gGlDs~qeD~~-~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l- 237 (411)
T PF06500_consen 165 IEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVC-----GGLDSLQEDLY-RLFRDYLAPRGIAMLTVDMPGQGESPKWPL- 237 (411)
T ss_dssp EEEEEEEETTCEEEEEEEESSSSS-EEEEEEE-------TTS-GGGGH-HHHHCCCHHCT-EEEEE--TTSGGGTTT-S-
T ss_pred cEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEe-----CCcchhHHHHH-HHHHHHHHhCCCEEEEEccCCCcccccCCC-
Confidence 45556777777775444333 223555555 33333333433 33334 345799999999999998853211
Q ss_pred CCCcccHHHHHHHHHHHHHhcCC---CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch-hHHHHhhhhhhh
Q 022316 96 DEPVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSNL 171 (299)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~---~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~ 171 (299)
. .+.+.+-+.+.+.+..... .++.++|.||||++|.++|..+++|++++|..+++...--. ..+.
T Consensus 238 -~--~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~-------- 306 (411)
T PF06500_consen 238 -T--QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQ-------- 306 (411)
T ss_dssp ----S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHH--------
T ss_pred -C--cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHH--------
Confidence 1 1223455666666666543 68999999999999999999999999999999987543211 1111
Q ss_pred HHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChh--hhh--ccccccEEE
Q 022316 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDIS--EGL--RKLQCRSLI 247 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~i~~P~li 247 (299)
...+..... .+...++.... +.+ .+...+.. ..+. ..+ .+.++|+|.
T Consensus 307 ---~~~P~my~d-~LA~rlG~~~~------~~~---~l~~el~~----------------~SLk~qGlL~~rr~~~plL~ 357 (411)
T PF06500_consen 307 ---QRVPDMYLD-VLASRLGMAAV------SDE---SLRGELNK----------------FSLKTQGLLSGRRCPTPLLA 357 (411)
T ss_dssp ---TTS-HHHHH-HHHHHCT-SCE-------HH---HHHHHGGG----------------GSTTTTTTTTSS-BSS-EEE
T ss_pred ---hcCCHHHHH-HHHHHhCCccC------CHH---HHHHHHHh----------------cCcchhccccCCCCCcceEE
Confidence 111111111 22222222211 011 11111111 1221 123 678899999
Q ss_pred EecCCCcch--hhhHHHhhhccccCceEEEEcC-chhhhHhHHHHHHHHhhhh
Q 022316 248 FVGESSPFH--SEAVHMTSKIDRRYSALVEVWT-RVYISLLGFLVLLASFCES 297 (299)
Q Consensus 248 i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~f~~~~~~~~~~ 297 (299)
+.|++|++. ++.+-++..- ...+...+|. .-|.-...-+..+..|+++
T Consensus 358 i~~~~D~v~P~eD~~lia~~s--~~gk~~~~~~~~~~~gy~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 358 INGEDDPVSPIEDSRLIAESS--TDGKALRIPSKPLHMGYPQALDEIYKWLED 408 (411)
T ss_dssp EEETT-SSS-HHHHHHHHHTB--TT-EEEEE-SSSHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCHHHHHHHHhcC--CCCceeecCCCccccchHHHHHHHHHHHHH
Confidence 999999998 4443333332 2255666664 4476666666666666665
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.8e-14 Score=118.06 Aligned_cols=129 Identities=12% Similarity=0.109 Sum_probs=89.3
Q ss_pred CcceeecCCceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
+...+-.....+....|.+ ..++|||+++++....+..+-.- -...+..++.+||+|+++|+++-+..+
T Consensus 190 TPg~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P-~~SlVr~lv~qG~~VflIsW~nP~~~~------ 262 (560)
T TIGR01839 190 TEGAVVFRNEVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSP-EKSFVQYCLKNQLQVFIISWRNPDKAH------ 262 (560)
T ss_pred CCCceeEECCceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCC-cchHHHHHHHcCCeEEEEeCCCCChhh------
Confidence 3344444444444444433 23568999988775543322111 124556677889999999999876553
Q ss_pred CCcccHHHHHHHHHHHHHhc----CCCcEEEEeeCccHHHHHH----HHHHccC-cccEEEEecCCCCCc
Q 022316 97 EPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTL----FAMKYRH-RVLGLILVSPLCKAP 157 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~va~~----~a~~~p~-~v~~lvl~~~~~~~~ 157 (299)
...+++|+++.+.+.++.+ |.++++++|+|+||.++.. +++++++ +|++++++.++....
T Consensus 263 -r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 263 -REWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 2478888887777766654 6689999999999999986 7888886 799999998877653
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.4e-15 Score=127.66 Aligned_cols=121 Identities=14% Similarity=0.155 Sum_probs=85.0
Q ss_pred CCceEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHH
Q 022316 28 SHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD 104 (299)
Q Consensus 28 ~~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 104 (299)
++.+|++..+-+ +..|+||++||++.+..... ...+ .....++.+||.|+++|+||+|.|..... ..+ .+
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~-~~~~-~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~----~~~-~~ 77 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRW-GLDK-TEPAWFVAQGYAVVIQDTRGRGASEGEFD----LLG-SD 77 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhcc-cccc-ccHHHHHhCCcEEEEEeccccccCCCceE----ecC-cc
Confidence 445787665533 35689999999887542100 0101 12234557799999999999999975322 122 45
Q ss_pred HHHHHHHHHHhcC-----CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 105 LADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 105 ~~~~l~~~l~~l~-----~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
.++|+.++++.+. .+++.++|+|+||.+++.+|..+|++++++|..++...
T Consensus 78 ~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 78 EAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred cchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 6667766666552 25899999999999999999999999999999887654
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.1e-14 Score=112.86 Aligned_cols=232 Identities=11% Similarity=0.048 Sum_probs=127.4
Q ss_pred CcceeecCCceEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
++..+...+|.+..+.+.+ ...|+||++||.|....+. ..|...+..+.. .|+.|+.+|+|...+. +.+
T Consensus 58 ~~~~i~~~~g~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~---~~~~~~~~~la~~~g~~Vv~vdYrlape~--~~p--- 129 (318)
T PRK10162 58 RAYMVPTPYGQVETRLYYPQPDSQATLFYLHGGGFILGNL---DTHDRIMRLLASYSGCTVIGIDYTLSPEA--RFP--- 129 (318)
T ss_pred EEEEEecCCCceEEEEECCCCCCCCEEEEEeCCcccCCCc---hhhhHHHHHHHHHcCCEEEEecCCCCCCC--CCC---
Confidence 3445666666677766644 3458899999987442221 113233333333 3899999999976433 112
Q ss_pred CcccHHHHHHHHH---HHHHhcCC--CcEEEEeeCccHHHHHHHHHHc------cCcccEEEEecCCCCCcchhHHHHhh
Q 022316 98 PVLSVDDLADQIA---EVLNHFGL--GAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKAPSWTEWLYNK 166 (299)
Q Consensus 98 ~~~~~~~~~~~l~---~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (299)
..++|..+.+. +..+.+++ ++++|+|+|+||.+++.++.+. +.++++++++.|..............
T Consensus 130 --~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~ 207 (318)
T PRK10162 130 --QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLG 207 (318)
T ss_pred --CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhC
Confidence 23455444333 33445655 5899999999999999988753 35789999998866542111100000
Q ss_pred hhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEE
Q 022316 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246 (299)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 246 (299)
. ....+. ....+.+...+........ ..+.. .....+.+--.|++
T Consensus 208 ---~--~~~~l~------------------------~~~~~~~~~~y~~~~~~~~----~p~~~--p~~~~l~~~lPp~~ 252 (318)
T PRK10162 208 ---G--VWDGLT------------------------QQDLQMYEEAYLSNDADRE----SPYYC--LFNNDLTRDVPPCF 252 (318)
T ss_pred ---C--CccccC------------------------HHHHHHHHHHhCCCccccC----CcccC--cchhhhhcCCCCeE
Confidence 0 000000 1111111111110000000 00000 00111212235999
Q ss_pred EEecCCCcchhhhHHHhhhcc--ccCceEEEEcCchhhhH---------hHHHHHHHHhhhh
Q 022316 247 IFVGESSPFHSEAVHMTSKID--RRYSALVEVWTRVYISL---------LGFLVLLASFCES 297 (299)
Q Consensus 247 ii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~---------~~f~~~~~~~~~~ 297 (299)
+++|+.|++.++...+.+++. +..++++++++..|..+ .+.++.+.+|+.+
T Consensus 253 i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~ 314 (318)
T PRK10162 253 IAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTA 314 (318)
T ss_pred EEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHH
Confidence 999999999877777777763 33588999999999643 2455666667654
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.5e-15 Score=105.93 Aligned_cols=201 Identities=15% Similarity=0.122 Sum_probs=121.7
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
+....+|++||+-.+..... ...++..+. .|+.++.+|++|.|+|..... .......++|+..+++++.-
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~-----~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~----~Gn~~~eadDL~sV~q~~s~ 101 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAII-----MKNVAKALEKEGISAFRFDFSGNGESEGSFY----YGNYNTEADDLHSVIQYFSN 101 (269)
T ss_pred CCceEEEEeeccccccchHH-----HHHHHHHHHhcCceEEEEEecCCCCcCCccc----cCcccchHHHHHHHHHHhcc
Confidence 36678999999877653311 133344444 599999999999999965432 23444556999999988754
Q ss_pred -Cc--EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH-HHHhhhhhhhHHhhcchhHHHHHHHHhhhcccc
Q 022316 119 -GA--VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEV 194 (299)
Q Consensus 119 -~~--~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (299)
.+ .+++|||-||.+++.+|.++++ +.-+|-++.......... ... ..+. ++.....|-...
T Consensus 102 ~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg-------------~~~l-~~ike~Gfid~~ 166 (269)
T KOG4667|consen 102 SNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLG-------------EDYL-ERIKEQGFIDVG 166 (269)
T ss_pred CceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhc-------------ccHH-HHHHhCCceecC
Confidence 33 3699999999999999999987 666666655433222111 000 0000 111121111111
Q ss_pred ccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccc--cccEEEEecCCCcch--hhhHHHhhhccccC
Q 022316 195 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL--QCRSLIFVGESSPFH--SEAVHMTSKIDRRY 270 (299)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~lii~G~~D~~~--~~~~~~~~~~~~~~ 270 (299)
... -+. ........+..... .+..+...+| +||||-++|..|.+| +.+.++++.+++
T Consensus 167 ~rk-----G~y-----------~~rvt~eSlmdrLn-td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-- 227 (269)
T KOG4667|consen 167 PRK-----GKY-----------GYRVTEESLMDRLN-TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-- 227 (269)
T ss_pred ccc-----CCc-----------CceecHHHHHHHHh-chhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC--
Confidence 000 000 00000000000011 2333444444 799999999999998 899999999987
Q ss_pred ceEEEEcCchhhh
Q 022316 271 SALVEVWTRVYIS 283 (299)
Q Consensus 271 ~~~~~~~~~~H~~ 283 (299)
.++..+|++.|.-
T Consensus 228 H~L~iIEgADHny 240 (269)
T KOG4667|consen 228 HKLEIIEGADHNY 240 (269)
T ss_pred CceEEecCCCcCc
Confidence 7899999999964
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.60 E-value=2e-15 Score=118.82 Aligned_cols=116 Identities=11% Similarity=0.127 Sum_probs=80.9
Q ss_pred eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhh-ccc-CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHH
Q 022316 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACS-LLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (299)
Q Consensus 31 ~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~-~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 108 (299)
.+.+..+. +++|++|++||++.+... . |...+.. ++. .+++|+++|+++++.+.. + ....++...+++
T Consensus 26 ~~~~~~f~-~~~p~vilIHG~~~~~~~----~-~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y--~--~a~~~~~~v~~~ 95 (275)
T cd00707 26 SLKNSNFN-PSRPTRFIIHGWTSSGEE----S-WISDLRKAYLSRGDYNVIVVDWGRGANPNY--P--QAVNNTRVVGAE 95 (275)
T ss_pred hhhhcCCC-CCCCcEEEEcCCCCCCCC----c-HHHHHHHHHHhcCCCEEEEEECccccccCh--H--HHHHhHHHHHHH
Confidence 45554455 467889999999887622 1 4333333 444 589999999999843311 1 112345555555
Q ss_pred HHHHHHhc------CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 109 IAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 109 l~~~l~~l------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
+..+++.+ +.++++||||||||.+|..++.++|++|+++++++|+...
T Consensus 96 la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 96 LAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 55555443 4478999999999999999999999999999999987654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-14 Score=109.14 Aligned_cols=111 Identities=11% Similarity=0.093 Sum_probs=73.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCC----CC--CCCcccHHHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAI----SD--DEPVLSVDDLADQIAEVL 113 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~----~~--~~~~~~~~~~~~~l~~~l 113 (299)
+.|+||++||.+.+........-| ..++ ..||.|+++|.||++.+.... +. ........++.+.+..+.
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~----~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 87 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGW----KAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVK 87 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcCh----HHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHH
Confidence 578999999998776542211112 2333 359999999999997543210 00 001112333333444444
Q ss_pred HhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 114 NHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 114 ~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
+..++ ++++|+|||+||.+++.++.++|+++.+++.+++...
T Consensus 88 ~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 88 ANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 44444 5899999999999999999999999999998887654
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-14 Score=114.38 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=67.8
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHH---HHHHHHHHHHh-
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD---LADQIAEVLNH- 115 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~---~~~~l~~~l~~- 115 (299)
.+.|+|||+||++.+.. +|...+..+.+.||.|+++|++|++.+. ....+++ ..+.+.+.++.
T Consensus 50 g~~PvVv~lHG~~~~~~------~y~~l~~~Las~G~~VvapD~~g~~~~~-------~~~~i~d~~~~~~~l~~~l~~~ 116 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNS------FYSQLLQHIASHGFIVVAPQLYTLAGPD-------GTDEIKDAAAVINWLSSGLAAV 116 (313)
T ss_pred CCCCEEEEECCCCCCcc------cHHHHHHHHHhCCCEEEEecCCCcCCCC-------chhhHHHHHHHHHHHHhhhhhh
Confidence 35689999999987642 2433333344469999999999975321 1122333 22223222222
Q ss_pred ------cCCCcEEEEeeCccHHHHHHHHHHccC-----cccEEEEecCCC
Q 022316 116 ------FGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLC 154 (299)
Q Consensus 116 ------l~~~~~~lvG~S~Gg~va~~~a~~~p~-----~v~~lvl~~~~~ 154 (299)
.+.++++++||||||.+++.+|.++++ +++++|+++|..
T Consensus 117 l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 117 LPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred cccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 334789999999999999999998874 578888888754
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.5e-14 Score=106.36 Aligned_cols=180 Identities=18% Similarity=0.183 Sum_probs=102.8
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhh--cccCceEEEEECCCC------CCCC--CC-C---CCCCC--CcccHH
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACS--LLLHNFCIYHINPPG------HEFG--AA-A---ISDDE--PVLSVD 103 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~--~l~~~~~vi~~D~~G------~G~S--~~-~---~~~~~--~~~~~~ 103 (299)
+..++|||+||.|.+... | ..... ....+.+++.++-|- .|.. .. + ..... ....+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~------~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDL------F-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp T-SEEEEEE--TTS-HHH------H-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred CCceEEEEECCCCCCcch------h-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 467899999999999833 2 22122 223467787776542 1220 00 0 00000 122344
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcch
Q 022316 104 DLADQIAEVLNH-----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (299)
Q Consensus 104 ~~~~~l~~~l~~-----l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
+.++.+.++++. +..++++|.|+|.||++|+.++.++|+.+.++|.+++.........
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~----------------- 147 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE----------------- 147 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH-----------------
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc-----------------
Confidence 444455555543 2336899999999999999999999999999999987432110000
Q ss_pred hHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--
Q 022316 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-- 256 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~-- 256 (299)
+...... ++|+++++|++|+++
T Consensus 148 ------------------------------------------------------~~~~~~~--~~pi~~~hG~~D~vvp~ 171 (216)
T PF02230_consen 148 ------------------------------------------------------DRPEALA--KTPILIIHGDEDPVVPF 171 (216)
T ss_dssp ------------------------------------------------------CCHCCCC--TS-EEEEEETT-SSSTH
T ss_pred ------------------------------------------------------ccccccC--CCcEEEEecCCCCcccH
Confidence 0000001 579999999999997
Q ss_pred hhhHHHhhhcc--ccCceEEEEcCchhhhHhHHHHHHHHhhhhcC
Q 022316 257 SEAVHMTSKID--RRYSALVEVWTRVYISLLGFLVLLASFCESEF 299 (299)
Q Consensus 257 ~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~~ 299 (299)
+.++...+.+. +..+++.++++.||....+.++.+.+|+++.+
T Consensus 172 ~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 172 EWAEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhhC
Confidence 44555555442 22488999999999999999999999998753
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-12 Score=106.62 Aligned_cols=104 Identities=13% Similarity=0.151 Sum_probs=79.8
Q ss_pred CeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEE
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVM 122 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 122 (299)
|+||++..+..+...-. +..+..++. |+.|+..|+.--+... ......+++|+++-+.++++++|.+ ++
T Consensus 103 ~pvLiV~Pl~g~~~~L~-----RS~V~~Ll~-g~dVYl~DW~~p~~vp----~~~~~f~ldDYi~~l~~~i~~~G~~-v~ 171 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLL-----RSTVEALLP-DHDVYITDWVNARMVP----LSAGKFDLEDYIDYLIEFIRFLGPD-IH 171 (406)
T ss_pred CcEEEEcCCchHHHHHH-----HHHHHHHhC-CCcEEEEeCCCCCCCc----hhcCCCCHHHHHHHHHHHHHHhCCC-Cc
Confidence 78999977775554421 234455566 9999999997765331 1234589999999999999999877 99
Q ss_pred EEeeCccHHHHHHHHHHc-----cCcccEEEEecCCCCCc
Q 022316 123 CMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCKAP 157 (299)
Q Consensus 123 lvG~S~Gg~va~~~a~~~-----p~~v~~lvl~~~~~~~~ 157 (299)
++|+|+||..++.+++.. |++++++++++++....
T Consensus 172 l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 172 VIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred EEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 999999999987766655 66799999999887653
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.6e-12 Score=101.39 Aligned_cols=213 Identities=13% Similarity=0.016 Sum_probs=112.3
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCC-CCCCCCC------CC---------CCcccHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE-FGAAAIS------DD---------EPVLSVDD 104 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G-~S~~~~~------~~---------~~~~~~~~ 104 (299)
+-|.||.+||.+..... | .........||.|+.+|.||.| .+..... .. ...+-+..
T Consensus 82 ~~Pavv~~hGyg~~~~~------~-~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~ 154 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGD------P-FDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRR 154 (320)
T ss_dssp SEEEEEEE--TT--GGG------H-HHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHH
T ss_pred CcCEEEEecCCCCCCCC------c-ccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHH
Confidence 45789999999887533 2 1223455689999999999999 3321100 00 11122333
Q ss_pred HHHHHHHHHHhc------CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcch
Q 022316 105 LADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (299)
Q Consensus 105 ~~~~l~~~l~~l------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
+..|....++.+ +.+++.+.|.|.||.+++.+|+..| +|++++...|...-.... +.. . ....
T Consensus 155 ~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~-~~~--------~-~~~~ 223 (320)
T PF05448_consen 155 VYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRA-LEL--------R-ADEG 223 (320)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHH-HHH--------T---ST
T ss_pred HHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhh-hhc--------C-Cccc
Confidence 444444444332 2368999999999999999999875 699999888744321110 000 0 0000
Q ss_pred hHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--
Q 022316 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-- 256 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~-- 256 (299)
.+. .+..++..... ..+..+.+.+.+ ...|.....+.|+||+++-.|-.|.++
T Consensus 224 ~y~---~~~~~~~~~d~------~~~~~~~v~~~L----------------~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP 278 (320)
T PF05448_consen 224 PYP---EIRRYFRWRDP------HHEREPEVFETL----------------SYFDAVNFARRIKCPVLFSVGLQDPVCPP 278 (320)
T ss_dssp TTH---HHHHHHHHHSC------THCHHHHHHHHH----------------HTT-HHHHGGG--SEEEEEEETT-SSS-H
T ss_pred cHH---HHHHHHhccCC------CcccHHHHHHHH----------------hhhhHHHHHHHcCCCEEEEEecCCCCCCc
Confidence 000 11112210000 011111111111 114556667889999999999999998
Q ss_pred hhhHHHhhhccccCceEEEEcCchhhhHhHH-HHHHHHhhhh
Q 022316 257 SEAVHMTSKIDRRYSALVEVWTRVYISLLGF-LVLLASFCES 297 (299)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f-~~~~~~~~~~ 297 (299)
+........+++. .++.++|..+|....++ -+..-.|+++
T Consensus 279 ~t~fA~yN~i~~~-K~l~vyp~~~He~~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 279 STQFAAYNAIPGP-KELVVYPEYGHEYGPEFQEDKQLNFLKE 319 (320)
T ss_dssp HHHHHHHCC--SS-EEEEEETT--SSTTHHHHHHHHHHHHHH
T ss_pred hhHHHHHhccCCC-eeEEeccCcCCCchhhHHHHHHHHHHhc
Confidence 5556666777654 89999999999999998 6666777764
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.9e-11 Score=94.56 Aligned_cols=101 Identities=21% Similarity=0.252 Sum_probs=79.0
Q ss_pred CeEEEecccccchhhhccccccCchhhhcccCc-eEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCC-c
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG-A 120 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~ 120 (299)
++|+|+|+.+++... | ..+.+.+... +.|+.++.||.+... ....+++++++...+.|.....+ +
T Consensus 1 ~~lf~~p~~gG~~~~------y-~~la~~l~~~~~~v~~i~~~~~~~~~------~~~~si~~la~~y~~~I~~~~~~gp 67 (229)
T PF00975_consen 1 RPLFCFPPAGGSASS------Y-RPLARALPDDVIGVYGIEYPGRGDDE------PPPDSIEELASRYAEAIRARQPEGP 67 (229)
T ss_dssp -EEEEESSTTCSGGG------G-HHHHHHHTTTEEEEEEECSTTSCTTS------HEESSHHHHHHHHHHHHHHHTSSSS
T ss_pred CeEEEEcCCccCHHH------H-HHHHHhCCCCeEEEEEEecCCCCCCC------CCCCCHHHHHHHHHHHhhhhCCCCC
Confidence 369999999887644 3 5557777885 999999999997222 12479999999988887776554 9
Q ss_pred EEEEeeCccHHHHHHHHHHc---cCcccEEEEecCCCCC
Q 022316 121 VMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKA 156 (299)
Q Consensus 121 ~~lvG~S~Gg~va~~~a~~~---p~~v~~lvl~~~~~~~ 156 (299)
+.|+|||+||.+|+++|.+- ...|..++++++.+..
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPS 106 (229)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTT
T ss_pred eeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCC
Confidence 99999999999999999864 3458999999976543
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-12 Score=114.62 Aligned_cols=218 Identities=12% Similarity=0.035 Sum_probs=130.2
Q ss_pred CCCcceeecCC-ceEEE-Eec-----cCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCC
Q 022316 19 SGKDNLIKTSH-GSLSV-TIY-----GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 19 ~~~~~~i~~~~-~~l~~-~~~-----g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~ 91 (299)
..+...++..+ .+|.+ ..+ .+++.|.||++||........ . |......++.+||.|+.++.||-|.=..
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p---~-f~~~~~~l~~rG~~v~~~n~RGs~g~G~ 490 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA---D-FSFSRLSLLDRGFVYAIVHVRGGGELGQ 490 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC---C-ccHHHHHHHHCCcEEEEEEcCCCCccCH
Confidence 33444555544 46665 332 123568999999976655331 1 2344456778899999999999764322
Q ss_pred CCC----CCCCcccHHHHHHHHHHHHHhc--CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHh
Q 022316 92 AIS----DDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN 165 (299)
Q Consensus 92 ~~~----~~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 165 (299)
... ......+++|+.+.+..+++.- ..+++.+.|.|.||.++...+.++|++++++|...|.........
T Consensus 491 ~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~---- 566 (686)
T PRK10115 491 QWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTML---- 566 (686)
T ss_pred HHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcc----
Confidence 110 1122367888888888777652 236899999999999999999999999999999887554321100
Q ss_pred hhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccccc-
Q 022316 166 KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR- 244 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P- 244 (299)
. ....... . ... .++... +++..+.+.. .+....+.+++.|
T Consensus 567 -------~-~~~p~~~-~-~~~-e~G~p~-------~~~~~~~l~~--------------------~SP~~~v~~~~~P~ 608 (686)
T PRK10115 567 -------D-ESIPLTT-G-EFE-EWGNPQ-------DPQYYEYMKS--------------------YSPYDNVTAQAYPH 608 (686)
T ss_pred -------c-CCCCCCh-h-HHH-HhCCCC-------CHHHHHHHHH--------------------cCchhccCccCCCc
Confidence 0 0000000 0 000 011000 1111111111 2333445677889
Q ss_pred EEEEecCCCcch--hhhHHHhhhcc--ccCceEEEE---cCchhh
Q 022316 245 SLIFVGESSPFH--SEAVHMTSKID--RRYSALVEV---WTRVYI 282 (299)
Q Consensus 245 ~lii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~~---~~~~H~ 282 (299)
+|+++|.+|.-| ..+.++..++. +....++.+ +++||.
T Consensus 609 lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 609 LLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred eeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 567799999987 66777777663 223556666 999996
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.2e-12 Score=94.96 Aligned_cols=176 Identities=15% Similarity=0.106 Sum_probs=113.3
Q ss_pred CCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCC--CCCC----CCCCCC---CCCCcccHHHHHHHH
Q 022316 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP--GHEF----GAAAIS---DDEPVLSVDDLADQI 109 (299)
Q Consensus 39 ~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~--G~G~----S~~~~~---~~~~~~~~~~~~~~l 109 (299)
.+..|+||++||+|.+..+... .......++.++.+--+ -.|. +..... ...-......+++.+
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~-------~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVP-------LPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhh-------hhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 3566789999999988866222 13333445555543211 0110 000000 000112334455556
Q ss_pred HHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHH
Q 022316 110 AEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (299)
Q Consensus 110 ~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (299)
..+.+.+++ ++++++|+|-||++++.+..++|+.+++++++++........
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~--------------------------- 140 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL--------------------------- 140 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc---------------------------
Confidence 666677777 799999999999999999999999999999888754322100
Q ss_pred hhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhh
Q 022316 188 RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSK 265 (299)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~ 265 (299)
. -..-..|+++++|+.|+++ ..+.++.+.
T Consensus 141 -----~--------------------------------------------~~~~~~pill~hG~~Dpvvp~~~~~~l~~~ 171 (207)
T COG0400 141 -----L--------------------------------------------PDLAGTPILLSHGTEDPVVPLALAEALAEY 171 (207)
T ss_pred -----c--------------------------------------------cccCCCeEEEeccCcCCccCHHHHHHHHHH
Confidence 0 0012459999999999997 444444444
Q ss_pred cc--ccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 266 ID--RRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 266 ~~--~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+. +..+...+++ .||.+-.+.++...+|+...
T Consensus 172 l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~wl~~~ 205 (207)
T COG0400 172 LTASGADVEVRWHE-GGHEIPPEELEAARSWLANT 205 (207)
T ss_pred HHHcCCCEEEEEec-CCCcCCHHHHHHHHHHHHhc
Confidence 32 2347777887 99999999999999998764
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.1e-13 Score=115.46 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=68.9
Q ss_pred CeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCC---------CCCCCC----------cccHH
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA---------ISDDEP----------VLSVD 103 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~---------~~~~~~----------~~~~~ 103 (299)
|+|||+||++.+... |......+...||+|+++|+||||+|... ...... ..+++
T Consensus 450 P~VVllHG~~g~~~~------~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~r 523 (792)
T TIGR03502 450 PVVIYQHGITGAKEN------ALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLR 523 (792)
T ss_pred cEEEEeCCCCCCHHH------HHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHH
Confidence 589999999998855 53443333347999999999999988432 000000 13789
Q ss_pred HHHHHHHHHHHhcC----------------CCcEEEEeeCccHHHHHHHHHHc
Q 022316 104 DLADQIAEVLNHFG----------------LGAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 104 ~~~~~l~~~l~~l~----------------~~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
+.+.|+..+...++ ..+++++||||||.++..++...
T Consensus 524 Q~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 524 QSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 99999998887776 24899999999999999998753
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.2e-12 Score=88.76 Aligned_cols=190 Identities=15% Similarity=0.112 Sum_probs=117.1
Q ss_pred ceeecCCceEEEEec--cCCCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 23 NLIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~--g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
..++-+.|++..+.. ..+..|..|++|.-+..+........ ..+.+.+ ..||.++.+|+||-|+|..... .+.
T Consensus 7 v~i~Gp~G~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv--~~la~~l~~~G~atlRfNfRgVG~S~G~fD--~Gi 82 (210)
T COG2945 7 VIINGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVV--QTLARALVKRGFATLRFNFRGVGRSQGEFD--NGI 82 (210)
T ss_pred EEecCCcccceeccCCCCCCCCceEEecCCCccccCccCCHHH--HHHHHHHHhCCceEEeecccccccccCccc--CCc
Confidence 445556666654433 33456777888876666555444332 2223334 4599999999999999987543 333
Q ss_pred ccHHHHHHHHHHHHHhcCCCc-EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcch
Q 022316 100 LSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~-~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
-..+|....+.-+.+.....+ +.|.|+|+|++|+..+|.+.|+. ...+.+.|.... +
T Consensus 83 GE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~--~------------------- 140 (210)
T COG2945 83 GELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINA--Y------------------- 140 (210)
T ss_pred chHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCc--h-------------------
Confidence 455555544444433333333 46899999999999999998763 333433332210 0
Q ss_pred hHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--
Q 022316 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-- 256 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~-- 256 (299)
+ ...+....+|.++|+|+.|.++
T Consensus 141 ----d---------------------------------------------------fs~l~P~P~~~lvi~g~~Ddvv~l 165 (210)
T COG2945 141 ----D---------------------------------------------------FSFLAPCPSPGLVIQGDADDVVDL 165 (210)
T ss_pred ----h---------------------------------------------------hhhccCCCCCceeEecChhhhhcH
Confidence 0 0012345679999999999887
Q ss_pred hhhHHHhhhccccCceEEEEcCchhhhHh---HHHHHHHHhhh
Q 022316 257 SEAVHMTSKIDRRYSALVEVWTRVYISLL---GFLVLLASFCE 296 (299)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~---~f~~~~~~~~~ 296 (299)
....+..+. ...+++.++++.|+-.- +.-+.++.|++
T Consensus 166 ~~~l~~~~~---~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 166 VAVLKWQES---IKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred HHHHHhhcC---CCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 334444433 34779999999997653 34455666663
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-11 Score=99.52 Aligned_cols=141 Identities=13% Similarity=0.150 Sum_probs=98.4
Q ss_pred CCCCCCcceeecCCce-EEE--EeccCCCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCC
Q 022316 16 PPPSGKDNLIKTSHGS-LSV--TIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 16 ~~~~~~~~~i~~~~~~-l~~--~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~ 91 (299)
...+.+++.+.|.+|- |.. ...+..++|+|+|.||+..++.......- ...++..| .+||+|+.-+.||.--|..
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p-~~sLaf~LadaGYDVWLgN~RGn~ySr~ 122 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGP-EQSLAFLLADAGYDVWLGNNRGNTYSRK 122 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCc-cccHHHHHHHcCCceeeecCcCcccchh
Confidence 3456788999998873 222 22333578999999999988866333221 12233334 4699999999999766654
Q ss_pred CC------CCCCCcccHHHHH-----HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC---cccEEEEecCCCCCc
Q 022316 92 AI------SDDEPVLSVDDLA-----DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAP 157 (299)
Q Consensus 92 ~~------~~~~~~~~~~~~~-----~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~~~~ 157 (299)
-. ....-.+++++++ +.|..+++..+.++++.||||.|+.....+++.+|+ +|+..++++|.....
T Consensus 123 h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 123 HKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred hcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 11 1123456777655 444555556677899999999999999999888875 699999999988554
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.2e-12 Score=92.85 Aligned_cols=154 Identities=10% Similarity=0.120 Sum_probs=101.3
Q ss_pred EEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEE
Q 022316 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124 (299)
Q Consensus 45 lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lv 124 (299)
|+++||++.+.... |++-+...+...++|-.+|+ . ..+.+++.+.+.+.+..+. +++++|
T Consensus 1 v~IvhG~~~s~~~H-----W~~wl~~~l~~~~~V~~~~~-----~---------~P~~~~W~~~l~~~i~~~~-~~~ilV 60 (171)
T PF06821_consen 1 VLIVHGYGGSPPDH-----WQPWLERQLENSVRVEQPDW-----D---------NPDLDEWVQALDQAIDAID-EPTILV 60 (171)
T ss_dssp EEEE--TTSSTTTS-----THHHHHHHHTTSEEEEEC-------T---------S--HHHHHHHHHHCCHC-T-TTEEEE
T ss_pred CEEeCCCCCCCccH-----HHHHHHHhCCCCeEEecccc-----C---------CCCHHHHHHHHHHHHhhcC-CCeEEE
Confidence 68899998887542 55665676766688887776 1 2477888888888777664 679999
Q ss_pred eeCccHHHHHHHH-HHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCch
Q 022316 125 GVTAGAYILTLFA-MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPES 203 (299)
Q Consensus 125 G~S~Gg~va~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (299)
|||+|+..+++++ .....+|++++|++|+..... .. .... ...|
T Consensus 61 aHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~-~~---------------~~~~------~~~f------------- 105 (171)
T PF06821_consen 61 AHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDP-EP---------------FPPE------LDGF------------- 105 (171)
T ss_dssp EETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCH-HC---------------CTCG------GCCC-------------
T ss_pred EeCHHHHHHHHHHhhcccccccEEEEEcCCCcccc-cc---------------hhhh------cccc-------------
Confidence 9999999999999 677889999999998643200 00 0000 0000
Q ss_pred HHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchh
Q 022316 204 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVY 281 (299)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H 281 (299)
.. .....+.+|.++|.+++|+++ +.+.++++.++ ++++.++++||
T Consensus 106 ----------------------------~~--~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~---a~~~~~~~~GH 152 (171)
T PF06821_consen 106 ----------------------------TP--LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG---AELIILGGGGH 152 (171)
T ss_dssp ----------------------------TT--SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT----EEEEETS-TT
T ss_pred ----------------------------cc--CcccccCCCeEEEEcCCCCccCHHHHHHHHHHcC---CCeEECCCCCC
Confidence 00 011234567899999999998 77888888884 66999999999
Q ss_pred hhHhH
Q 022316 282 ISLLG 286 (299)
Q Consensus 282 ~~~~~ 286 (299)
..-.+
T Consensus 153 f~~~~ 157 (171)
T PF06821_consen 153 FNAAS 157 (171)
T ss_dssp SSGGG
T ss_pred ccccc
Confidence 87654
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.8e-12 Score=80.99 Aligned_cols=76 Identities=14% Similarity=0.209 Sum_probs=58.0
Q ss_pred ceEEEEeccCCC--CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHH
Q 022316 30 GSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (299)
Q Consensus 30 ~~l~~~~~g~~~--~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (299)
.+|.++.+.+++ +.+|+++||++.++.. +...+..+..+||.|+++|+||||+|... .....+++++++
T Consensus 2 ~~L~~~~w~p~~~~k~~v~i~HG~~eh~~r------y~~~a~~L~~~G~~V~~~D~rGhG~S~g~---rg~~~~~~~~v~ 72 (79)
T PF12146_consen 2 TKLFYRRWKPENPPKAVVVIVHGFGEHSGR------YAHLAEFLAEQGYAVFAYDHRGHGRSEGK---RGHIDSFDDYVD 72 (79)
T ss_pred cEEEEEEecCCCCCCEEEEEeCCcHHHHHH------HHHHHHHHHhCCCEEEEECCCcCCCCCCc---ccccCCHHHHHH
Confidence 478888877644 5589999999888744 33444455567999999999999999742 234578999999
Q ss_pred HHHHHHH
Q 022316 108 QIAEVLN 114 (299)
Q Consensus 108 ~l~~~l~ 114 (299)
|+..+++
T Consensus 73 D~~~~~~ 79 (79)
T PF12146_consen 73 DLHQFIQ 79 (79)
T ss_pred HHHHHhC
Confidence 9998864
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.8e-11 Score=89.88 Aligned_cols=90 Identities=12% Similarity=0.198 Sum_probs=63.6
Q ss_pred EEEecccccchhhhccccccCchhhhccc---CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcE
Q 022316 45 LVTYPDLALNYMSCFQGLFFCPEACSLLL---HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (299)
Q Consensus 45 lvl~HG~~~~~~~~~~~~~w~~~~~~~l~---~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 121 (299)
|+++||+..+..+.-.. .+.+.+. ....+.++|+|- ..++..+.+.++++....+.+
T Consensus 2 ilYlHGF~Ssp~S~Ka~-----~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~ 61 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQ-----ALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENV 61 (187)
T ss_pred eEEecCCCCCCCCHHHH-----HHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCe
Confidence 78999999877552221 1122222 245666666642 345566777888888877779
Q ss_pred EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
.|||.||||..|..+|.+++ +++ |+++|+..+.
T Consensus 62 ~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~ 94 (187)
T PF05728_consen 62 VLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPY 94 (187)
T ss_pred EEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHH
Confidence 99999999999999999886 444 8999877543
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.6e-11 Score=87.77 Aligned_cols=223 Identities=13% Similarity=0.132 Sum_probs=103.7
Q ss_pred cceeecCCc-eEEEEeccCC-----CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCC-CCCCCCCC
Q 022316 22 DNLIKTSHG-SLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAIS 94 (299)
Q Consensus 22 ~~~i~~~~~-~l~~~~~g~~-----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~-G~S~~~~~ 94 (299)
.|.+..+++ +|++...-|. ..++||+..|++..-.. +.....++..+||+|+.||-.-| |.|+...
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh------~agLA~YL~~NGFhViRyDsl~HvGlSsG~I- 76 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDH------FAGLAEYLSANGFHVIRYDSLNHVGLSSGDI- 76 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGG------GHHHHHHHHTTT--EEEE---B----------
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHH------HHHHHHHHhhCCeEEEeccccccccCCCCCh-
Confidence 467777666 6666655442 34789999887765422 22333455567999999997766 7776543
Q ss_pred CCCCcccHHHHHHHHHHHHH---hcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhh
Q 022316 95 DDEPVLSVDDLADQIAEVLN---HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (299)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~---~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (299)
..+++....+++..+++ .-|..++-|+..|+.|-+|+..|++- .+.-+|..-+........... .-..+
T Consensus 77 ---~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~a---l~~Dy 148 (294)
T PF02273_consen 77 ---NEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKA---LGYDY 148 (294)
T ss_dssp -------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHH---HSS-G
T ss_pred ---hhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHH---hccch
Confidence 35888888887776655 45778999999999999999999853 366666655433221111100 00000
Q ss_pred HHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecC
Q 022316 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 251 (299)
+ +.. . . -++.- .++... +-.........+... ...+ ......++.+.+|++...++
T Consensus 149 l---~~~--i-~-~lp~d--ldfeGh----~l~~~vFv~dc~e~~-w~~l----------~ST~~~~k~l~iP~iaF~A~ 204 (294)
T PF02273_consen 149 L---QLP--I-E-QLPED--LDFEGH----NLGAEVFVTDCFEHG-WDDL----------DSTINDMKRLSIPFIAFTAN 204 (294)
T ss_dssp G---GS---G-G-G--SE--EEETTE----EEEHHHHHHHHHHTT--SSH----------HHHHHHHTT--S-EEEEEET
T ss_pred h---hcc--h-h-hCCCc--cccccc----ccchHHHHHHHHHcC-Cccc----------hhHHHHHhhCCCCEEEEEeC
Confidence 0 000 0 0 00000 000000 000000111111110 0000 11224467789999999999
Q ss_pred CCcch--hhhHHHhhhccccCceEEEEcCchhhh
Q 022316 252 SSPFH--SEAVHMTSKIDRRYSALVEVWTRVYIS 283 (299)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~ 283 (299)
+|..| .+..++...++.+.+++..++++.|..
T Consensus 205 ~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 205 DDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL 238 (294)
T ss_dssp T-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T
T ss_pred CCccccHHHHHHHHHhcCCCceeEEEecCccchh
Confidence 99998 778888888888889999999999974
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.9e-11 Score=91.60 Aligned_cols=102 Identities=19% Similarity=0.200 Sum_probs=66.3
Q ss_pred EEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh-----cCC
Q 022316 45 LVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH-----FGL 118 (299)
Q Consensus 45 lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~-----l~~ 118 (299)
||++||.+......... | .....++. .|+.|+.+|+|=..+. + -...++|..+.+..+++. .+.
T Consensus 1 v~~~HGGg~~~g~~~~~--~-~~~~~la~~~g~~v~~~~Yrl~p~~--~-----~p~~~~D~~~a~~~l~~~~~~~~~d~ 70 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH--W-PFAARLAAERGFVVVSIDYRLAPEA--P-----FPAALEDVKAAYRWLLKNADKLGIDP 70 (211)
T ss_dssp EEEE--STTTSCGTTTH--H-HHHHHHHHHHTSEEEEEE---TTTS--S-----TTHHHHHHHHHHHHHHHTHHHHTEEE
T ss_pred CEEECCcccccCChHHH--H-HHHHHHHhhccEEEEEeeccccccc--c-----ccccccccccceeeeccccccccccc
Confidence 78999988764332221 2 33344454 6999999999954221 1 124566666666666666 445
Q ss_pred CcEEEEeeCccHHHHHHHHHHccC----cccEEEEecCCCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKA 156 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~----~v~~lvl~~~~~~~ 156 (299)
++++|+|+|.||.+++.++....+ .++++++++|....
T Consensus 71 ~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 71 ERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred cceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 799999999999999999875543 38999999996544
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.8e-11 Score=89.47 Aligned_cols=209 Identities=11% Similarity=0.062 Sum_probs=121.9
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCC--CCCCCC---------------Cccc-
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA--AISDDE---------------PVLS- 101 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~--~~~~~~---------------~~~~- 101 (299)
+..|.||-.||.++++.. |.+. ......||.|+.+|.||.|.|.. ..++.+ ..+-
T Consensus 81 ~~~P~vV~fhGY~g~~g~------~~~~-l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyy 153 (321)
T COG3458 81 GKLPAVVQFHGYGGRGGE------WHDM-LHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYY 153 (321)
T ss_pred CccceEEEEeeccCCCCC------cccc-ccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEE
Confidence 356889999999888744 4222 34446799999999999996632 111111 1111
Q ss_pred ---HHHHHHHHHHHH--HhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhc
Q 022316 102 ---VDDLADQIAEVL--NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (299)
Q Consensus 102 ---~~~~~~~l~~~l--~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (299)
+.|.++.+..++ .....+++.+.|.|.||.+++..++..| +|++++.+-|...--. .+. . ...
T Consensus 154 r~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~--r~i------~---~~~ 221 (321)
T COG3458 154 RGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFP--RAI------E---LAT 221 (321)
T ss_pred eeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccch--hhe------e---ecc
Confidence 233333333332 2234479999999999999999888765 7888887766443211 000 0 000
Q ss_pred chhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch
Q 022316 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~ 256 (299)
...+ ..+.++|.... +...+ ..+ .+.. .|......+|++|+|+..|--|+++
T Consensus 222 ~~~y---dei~~y~k~h~--------~~e~~-v~~------------TL~y----fD~~n~A~RiK~pvL~svgL~D~vc 273 (321)
T COG3458 222 EGPY---DEIQTYFKRHD--------PKEAE-VFE------------TLSY----FDIVNLAARIKVPVLMSVGLMDPVC 273 (321)
T ss_pred cCcH---HHHHHHHHhcC--------chHHH-HHH------------HHhh----hhhhhHHHhhccceEEeecccCCCC
Confidence 0000 01222222111 11000 000 0011 2344445779999999999999998
Q ss_pred --hhhHHHhhhccccCceEEEEcCchhhhHhHHHHH-HHHhhh
Q 022316 257 --SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVL-LASFCE 296 (299)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~-~~~~~~ 296 (299)
+..-.+..++... .+..++|.-.|+-+-.|.+. ...|++
T Consensus 274 pPstqFA~yN~l~~~-K~i~iy~~~aHe~~p~~~~~~~~~~l~ 315 (321)
T COG3458 274 PPSTQFAAYNALTTS-KTIEIYPYFAHEGGPGFQSRQQVHFLK 315 (321)
T ss_pred CChhhHHHhhcccCC-ceEEEeeccccccCcchhHHHHHHHHH
Confidence 4444555666544 77888998889988877765 445544
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.6e-11 Score=92.26 Aligned_cols=107 Identities=17% Similarity=0.259 Sum_probs=63.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc---
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF--- 116 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l--- 116 (299)
....|||+.|++.+-.. .-+-+.++..|. .+|.|+-+-++-.. ...+..++++-++||.++++++
T Consensus 32 ~~~~llfIGGLtDGl~t----vpY~~~La~aL~~~~wsl~q~~LsSSy-------~G~G~~SL~~D~~eI~~~v~ylr~~ 100 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLT----VPYLPDLAEALEETGWSLFQVQLSSSY-------SGWGTSSLDRDVEEIAQLVEYLRSE 100 (303)
T ss_dssp SSSEEEEE--TT--TT-----STCHHHHHHHHT-TT-EEEEE--GGGB-------TTS-S--HHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCCC----CchHHHHHHHhccCCeEEEEEEecCcc-------CCcCcchhhhHHHHHHHHHHHHHHh
Confidence 45589999777655433 112245566665 49999999875421 1123467777788877777643
Q ss_pred -----CCCcEEEEeeCccHHHHHHHHHHcc-----CcccEEEEecCCCCCcc
Q 022316 117 -----GLGAVMCMGVTAGAYILTLFAMKYR-----HRVLGLILVSPLCKAPS 158 (299)
Q Consensus 117 -----~~~~~~lvG~S~Gg~va~~~a~~~p-----~~v~~lvl~~~~~~~~~ 158 (299)
+.++++|+|||.|+.-+++|+.... ..|++.|+-+|....+.
T Consensus 101 ~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 101 KGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp S------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred hccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 3468999999999999999988652 56999999999776543
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.7e-11 Score=81.12 Aligned_cols=110 Identities=12% Similarity=0.099 Sum_probs=77.9
Q ss_pred eEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCC--CCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcE
Q 022316 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF--GAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (299)
Q Consensus 44 ~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~--S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 121 (299)
+||+-||.|.+-.+.+ -......+...|+.|..+++|..-. .....|+.....-...+...+.++.+.+...+.
T Consensus 16 tilLaHGAGasmdSt~----m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpL 91 (213)
T COG3571 16 TILLAHGAGASMDSTS----MTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPL 91 (213)
T ss_pred EEEEecCCCCCCCCHH----HHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCce
Confidence 7888899988764422 1233344446799999999887642 222223333334456677788888888887899
Q ss_pred EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
++-|+||||-++..++..-...|+++++++-+...+
T Consensus 92 i~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhpp 127 (213)
T COG3571 92 IIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPP 127 (213)
T ss_pred eeccccccchHHHHHHHhhcCCcceEEEecCccCCC
Confidence 999999999999999887766699999988655443
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.6e-11 Score=89.80 Aligned_cols=207 Identities=10% Similarity=0.012 Sum_probs=112.9
Q ss_pred cCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHH-HHHHHHHh----cCCCcEEEEeeCccHHHHHHHHH
Q 022316 64 FCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD-QIAEVLNH----FGLGAVMCMGVTAGAYILTLFAM 138 (299)
Q Consensus 64 w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~-~l~~~l~~----l~~~~~~lvG~S~Gg~va~~~a~ 138 (299)
+++........||.|+++|+||.|.|+++.... ..+.+.|++. |+...++. +...+...||||+||.+.-.+ .
T Consensus 46 YRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~-~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~-~ 123 (281)
T COG4757 46 YRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSG-SQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLL-G 123 (281)
T ss_pred hHHHHHHhhccCceEEEEecccccCCCcccccc-CccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccc-c
Confidence 444444444569999999999999998654322 2366666654 55555544 444688999999999966544 4
Q ss_pred HccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcc-hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhccc
Q 022316 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM-CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ 217 (299)
Q Consensus 139 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (299)
+++ +..+....++......+...........+....+. ....+..+-+.+++..... .-...+.++..-...
T Consensus 124 ~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~-----p~~v~RdW~RwcR~p- 196 (281)
T COG4757 124 QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDL-----PGTVMRDWARWCRHP- 196 (281)
T ss_pred cCc-ccceeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccC-----cchHHHHHHHHhcCc-
Confidence 555 56666666666554443332211111111000000 0111111222223222100 123334444322221
Q ss_pred ccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCc----hhhhH
Q 022316 218 SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTR----VYISL 284 (299)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~----~H~~~ 284 (299)
. +...-..+ .+..+..+.+++|+..+...+|+.+ .....+.....+.+.++..++.+ ||.-.
T Consensus 197 ~--y~fddp~~---~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gy 264 (281)
T COG4757 197 R--YYFDDPAM---RNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGY 264 (281)
T ss_pred c--ccccChhH---hHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhh
Confidence 0 00000000 2345667889999999999999998 45556666666667788888776 77543
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.6e-11 Score=94.12 Aligned_cols=160 Identities=16% Similarity=0.136 Sum_probs=90.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc--------HHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS--------VDDLADQIAEV 112 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~--------~~~~~~~l~~~ 112 (299)
+.|.||++|++.+-... . ......+...||.|+++|+-+-.......+ ...... .+...+++...
T Consensus 13 ~~~~Vvv~~d~~G~~~~----~--~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa 85 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPN----I--RDLADRLAEEGYVVLAPDLFGGRGAPPSDP-EEAFAAMRELFAPRPEQVAADLQAA 85 (218)
T ss_dssp SEEEEEEE-BTTBS-HH----H--HHHHHHHHHTT-EEEEE-CCCCTS--CCCH-HCHHHHHHHCHHHSHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCchH----H--HHHHHHHHhcCCCEEecccccCCCCCccch-hhHHHHHHHHHhhhHHHHHHHHHHH
Confidence 46799999987543311 0 122334445699999999754432011100 000011 23445666555
Q ss_pred HHhc---C---CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHH
Q 022316 113 LNHF---G---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLL 186 (299)
Q Consensus 113 l~~l---~---~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (299)
++.+ . .+++.++|+||||.+++.+|.+. +.+++.|..-|....
T Consensus 86 ~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------------ 134 (218)
T PF01738_consen 86 VDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------------ 134 (218)
T ss_dssp HHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG------------------------------
T ss_pred HHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC------------------------------
Confidence 5444 2 25899999999999999998877 578888876650000
Q ss_pred HhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhh
Q 022316 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 264 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~ 264 (299)
........++++|+++++|++|+.+ +....+.+
T Consensus 135 ---------------------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~ 169 (218)
T PF01738_consen 135 ---------------------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEE 169 (218)
T ss_dssp ---------------------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHH
T ss_pred ---------------------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHH
Confidence 0111223567899999999999997 44455555
Q ss_pred hc--cccCceEEEEcCchhhh
Q 022316 265 KI--DRRYSALVEVWTRVYIS 283 (299)
Q Consensus 265 ~~--~~~~~~~~~~~~~~H~~ 283 (299)
.+ .+..++++.+|+++|--
T Consensus 170 ~l~~~~~~~~~~~y~ga~HgF 190 (218)
T PF01738_consen 170 ALKAAGVDVEVHVYPGAGHGF 190 (218)
T ss_dssp HHHCTTTTEEEEEETT--TTT
T ss_pred HHHhcCCcEEEEECCCCcccc
Confidence 54 23458999999999953
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.1e-11 Score=94.77 Aligned_cols=112 Identities=15% Similarity=0.108 Sum_probs=77.3
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcE
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 121 (299)
++|++++|.+-..-.-.+... -...+.-++.+|+.|+.+|+++=..+.... ....|-.+.+.+.+..+++..+.+++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~-~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~--~~edYi~e~l~~aid~v~~itg~~~I 183 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSP-EKSLVRWLLEQGLDVFVISWRNPDASLAAK--NLEDYILEGLSEAIDTVKDITGQKDI 183 (445)
T ss_pred CCceEeeccccCceeEEeCCC-CccHHHHHHHcCCceEEEeccCchHhhhhc--cHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 567999987655443322222 123444566789999999998876554311 11223334444556666777888999
Q ss_pred EEEeeCccHHHHHHHHHHccCc-ccEEEEecCCCCC
Q 022316 122 MCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCKA 156 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~ 156 (299)
+++|+|.||++++.+++.++.+ |++++++.++...
T Consensus 184 nliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 184 NLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred ceeeEecchHHHHHHHHhhhhcccccceeeecchhh
Confidence 9999999999999999988887 9999998876654
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=3e-10 Score=87.31 Aligned_cols=179 Identities=11% Similarity=0.067 Sum_probs=112.8
Q ss_pred ceeecCCceEEEEec---cCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCC-CCCCCCC--CCC
Q 022316 23 NLIKTSHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAI--SDD 96 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~---g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~-G~S~~~~--~~~ 96 (299)
..+..+++.+.-+.. +....|.||++|++.+-... -.....++...||.|+++|+-+. |.+.... +..
T Consensus 5 v~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~------i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~ 78 (236)
T COG0412 5 VTIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNPH------IRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAE 78 (236)
T ss_pred eEeeCCCceEeEEEecCCcCCCCCEEEEEecccCCchH------HHHHHHHHHhCCcEEEechhhccCCCCCcccccHHH
Confidence 455566666543332 22233899999987554321 12333445567999999998774 3332111 100
Q ss_pred CC-----cccHHHHHHHHHHHHHhcC------CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHh
Q 022316 97 EP-----VLSVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN 165 (299)
Q Consensus 97 ~~-----~~~~~~~~~~l~~~l~~l~------~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 165 (299)
.. ..+..+...|+.+.++.+. .+++.++|+||||.+++.++.+.| +|++.|..-+......
T Consensus 79 ~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~------- 150 (236)
T COG0412 79 LETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD------- 150 (236)
T ss_pred HhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc-------
Confidence 00 1223566777777776653 367999999999999999998887 6888776544221100
Q ss_pred hhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccE
Q 022316 166 KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 245 (299)
.....++++|+
T Consensus 151 ---------------------------------------------------------------------~~~~~~~~~pv 161 (236)
T COG0412 151 ---------------------------------------------------------------------TADAPKIKVPV 161 (236)
T ss_pred ---------------------------------------------------------------------ccccccccCcE
Confidence 00034689999
Q ss_pred EEEecCCCcch--hhhHHHhhhcccc--CceEEEEcCchhhhH
Q 022316 246 LIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVWTRVYISL 284 (299)
Q Consensus 246 lii~G~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~~H~~~ 284 (299)
|++.|+.|..+ .....+.+.+... .+.+.+++++.|.-.
T Consensus 162 l~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~ 204 (236)
T COG0412 162 LLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFA 204 (236)
T ss_pred EEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccc
Confidence 99999999997 4455555555333 578899999888655
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.6e-10 Score=103.01 Aligned_cols=82 Identities=11% Similarity=0.070 Sum_probs=59.4
Q ss_pred hhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC--------------------CCcEEEEeeCc
Q 022316 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG--------------------LGAVMCMGVTA 128 (299)
Q Consensus 69 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~--------------------~~~~~lvG~S~ 128 (299)
..++..||.|+..|.||+|.|..... ... .+-.+|..++++-+. -++|.++|.|+
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~----~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPT----TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCc----cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 34556799999999999999975422 111 222334433333332 26899999999
Q ss_pred cHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 129 GAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 129 Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
||.+++.+|...|+.++++|.+++...
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCc
Confidence 999999999999999999998876543
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.8e-10 Score=109.36 Aligned_cols=101 Identities=19% Similarity=0.184 Sum_probs=83.2
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC-C
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-G 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~ 119 (299)
++|+++|+||+++++.. | ..+...+..+++|+++|.||+|.+.. ..++++++++++.+.++.+.. +
T Consensus 1067 ~~~~l~~lh~~~g~~~~------~-~~l~~~l~~~~~v~~~~~~g~~~~~~------~~~~l~~la~~~~~~i~~~~~~~ 1133 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQ------F-SVLSRYLDPQWSIYGIQSPRPDGPMQ------TATSLDEVCEAHLATLLEQQPHG 1133 (1296)
T ss_pred CCCCeEEecCCCCchHH------H-HHHHHhcCCCCcEEEEECCCCCCCCC------CCCCHHHHHHHHHHHHHhhCCCC
Confidence 45789999999988744 5 44467778899999999999985521 247999999999999987654 5
Q ss_pred cEEEEeeCccHHHHHHHHHH---ccCcccEEEEecCCC
Q 022316 120 AVMCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLC 154 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~---~p~~v~~lvl~~~~~ 154 (299)
+++++||||||.+|.++|.+ .++++..++++++..
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 89999999999999999986 578899999998754
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-10 Score=91.20 Aligned_cols=118 Identities=17% Similarity=0.148 Sum_probs=92.3
Q ss_pred eecCCceEEEEeccCC------CCCeEEEecccccchhhhccccccCchhhhcccC----------ceEEEEECCCCCCC
Q 022316 25 IKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH----------NFCIYHINPPGHEF 88 (299)
Q Consensus 25 i~~~~~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~----------~~~vi~~D~~G~G~ 88 (299)
.++.|-++|+....++ +--||+++||++++-+. ++. +.++|.+ -|.||++.+||+|.
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~E------Fyk-fIPlLT~p~~hg~~~d~~FEVI~PSlPGygw 201 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVRE------FYK-FIPLLTDPKRHGNESDYAFEVIAPSLPGYGW 201 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHH------HHh-hhhhhcCccccCCccceeEEEeccCCCCccc
Confidence 4456668887766543 12379999999999766 222 2455532 28899999999999
Q ss_pred CCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecC
Q 022316 89 GAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP 152 (299)
Q Consensus 89 S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~ 152 (299)
|+.+.. ...+..+.|..+..++=++|..++.|-|-.||+.|+..+|..+|++|.++=+-.+
T Consensus 202 Sd~~sk---~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 202 SDAPSK---TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred CcCCcc---CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 976433 3478888999999999999999999999999999999999999999988655443
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.5e-09 Score=81.58 Aligned_cols=112 Identities=21% Similarity=0.274 Sum_probs=79.4
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC--CCCCCcccHHHHHHHHHHHHHhcC--
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI--SDDEPVLSVDDLADQIAEVLNHFG-- 117 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~~~~~l~~~l~~l~-- 117 (299)
++.++|++|-++-- . +...| -..+.+.+...+.|++..+.||-.+.... ......++++++.+...++++.+-
T Consensus 2 ~~li~~IPGNPGlv-~-fY~~F-l~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~ 78 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV-E-FYEEF-LSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQ 78 (266)
T ss_pred cEEEEEECCCCChH-H-HHHHH-HHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhh
Confidence 35688898776543 1 11111 11222333568999999999996554321 013467899999988877776542
Q ss_pred ----CCcEEEEeeCccHHHHHHHHHHcc---CcccEEEEecCCCCC
Q 022316 118 ----LGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKA 156 (299)
Q Consensus 118 ----~~~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~~~~ 156 (299)
-.+++|+|||.|++++++++.+++ .+|.+++++-|....
T Consensus 79 ~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 79 KNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred hcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 357999999999999999999999 789999999987643
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.2e-09 Score=85.07 Aligned_cols=122 Identities=11% Similarity=0.061 Sum_probs=72.1
Q ss_pred CceEEEEeccC-----CCCCeEEEecccccch-hhhccccccCch----hhhcccCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 29 HGSLSVTIYGD-----QDKPALVTYPDLALNY-MSCFQGLFFCPE----ACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 29 ~~~l~~~~~g~-----~~~p~lvl~HG~~~~~-~~~~~~~~w~~~----~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
|.+|...++-| ..-|+||..|+.+.+. ......... .. ...+..+||.|+..|.||+|.|......
T Consensus 2 Gv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~-~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~--- 77 (272)
T PF02129_consen 2 GVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGAN-PGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP--- 77 (272)
T ss_dssp S-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTC-HHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T---
T ss_pred CCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhh-cccchhHHHHHhCCCEEEEECCcccccCCCcccc---
Confidence 44555444432 3457888888887542 111111100 10 0116678999999999999999754321
Q ss_pred cccHHHHHHHHHH---HHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 99 VLSVDDLADQIAE---VLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 99 ~~~~~~~~~~l~~---~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
. ..+-++|..+ ++..... .+|.++|.|++|..++..|+..|..+++++...+....
T Consensus 78 -~-~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 78 -M-SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp -T-SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred -C-ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 1 2233333333 3333344 58999999999999999999888899999988765543
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.8e-10 Score=83.82 Aligned_cols=110 Identities=11% Similarity=0.063 Sum_probs=67.6
Q ss_pred CCCeEEEecccccchhhhcccc---ccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH----HHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGL---FFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA----DQIAEVL 113 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~---~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~----~~l~~~l 113 (299)
++.+|||+||.+++... ..+. .+...........++++++|+......- ....+.+.+ +.+..++
T Consensus 3 ~g~pVlFIhG~~Gs~~q-~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~-------~g~~l~~q~~~~~~~i~~i~ 74 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQ-VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF-------HGRTLQRQAEFLAEAIKYIL 74 (225)
T ss_pred CCCEEEEECcCCCCHhH-HHHHHHHHhhhhhhccCccceeEEEeccCcccccc-------ccccHHHHHHHHHHHHHHHH
Confidence 46789999998776542 1111 0000001112336899999987753221 112333333 3444455
Q ss_pred Hhc-----CCCcEEEEeeCccHHHHHHHHHHcc---CcccEEEEecCCCCCcc
Q 022316 114 NHF-----GLGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAPS 158 (299)
Q Consensus 114 ~~l-----~~~~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~~~~~~ 158 (299)
+.+ +.+++++|||||||.+|-.++...+ +.|+.+|.++++.....
T Consensus 75 ~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 75 ELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 545 4578999999999999988776543 47999999998776553
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.8e-08 Score=79.58 Aligned_cols=124 Identities=19% Similarity=0.193 Sum_probs=83.8
Q ss_pred CCceEEEEeccC------CCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 28 SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 28 ~~~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
..+.+.++.+-+ ...|.||++||.|.--.+.....+ ......... -+-.|+.+|+|=-=+. +.| .
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y-~~~~~~~a~~~~~vvvSVdYRLAPEh--~~P-----a 141 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAY-DSFCTRLAAELNCVVVSVDYRLAPEH--PFP-----A 141 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchh-HHHHHHHHHHcCeEEEecCcccCCCC--CCC-----c
Confidence 556777777654 246889999999876655444442 223233322 3788999999865322 222 4
Q ss_pred cHHHHHHHHHHHHHh------cCCCcEEEEeeCccHHHHHHHHHHc------cCcccEEEEecCCCCCcch
Q 022316 101 SVDDLADQIAEVLNH------FGLGAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKAPSW 159 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~------l~~~~~~lvG~S~Gg~va~~~a~~~------p~~v~~lvl~~~~~~~~~~ 159 (299)
.++|-.+.+..+++. .+.++++|+|-|.||.+|..+|.+. +-++++.|++-|.......
T Consensus 142 ~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 566666666666553 3457899999999999999888754 2469999999998876543
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.2e-09 Score=82.74 Aligned_cols=112 Identities=15% Similarity=0.085 Sum_probs=76.8
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH----------HHH
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA----------DQI 109 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~----------~~l 109 (299)
+.+|.+|.++|.|.+++.--.. -...+++.+|+..+.+..|-||.-.+.........+..|+. ..+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~----l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~L 165 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRR----LMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRAL 165 (348)
T ss_pred CCCceEEEecCCCccchhhhhh----hhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHH
Confidence 3578888998888876331111 11356677899999999999996544322222223333332 334
Q ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
..+++.-|..++.+.|.||||..|...|...|..|..+-.+++...
T Consensus 166 l~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sA 211 (348)
T PF09752_consen 166 LHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSA 211 (348)
T ss_pred HHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCC
Confidence 4555666889999999999999999999999998877777765443
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1e-08 Score=83.14 Aligned_cols=108 Identities=14% Similarity=0.085 Sum_probs=72.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh---c
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---F 116 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~---l 116 (299)
+.|+||++||.+.-..+.... + ..+..++ ..|+.|+.+|+|-.-+- +.| ..++|..+.+..+.+. +
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~--~-~~~~~~~~~~g~~vv~vdYrlaPe~--~~p-----~~~~d~~~a~~~l~~~~~~~ 147 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTH--D-ALVARLAAAAGAVVVSVDYRLAPEH--PFP-----AALEDAYAAYRWLRANAAEL 147 (312)
T ss_pred CCcEEEEEeCCeeeecChhhh--H-HHHHHHHHHcCCEEEecCCCCCCCC--CCC-----chHHHHHHHHHHHHhhhHhh
Confidence 468999999987654332211 1 2223333 46999999999876322 222 5566655555555544 3
Q ss_pred C--CCcEEEEeeCccHHHHHHHHHHccC----cccEEEEecCCCCCcc
Q 022316 117 G--LGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPS 158 (299)
Q Consensus 117 ~--~~~~~lvG~S~Gg~va~~~a~~~p~----~v~~lvl~~~~~~~~~ 158 (299)
+ .+++.++|+|.||.+++.++..-.+ .....+++.|......
T Consensus 148 g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 148 GIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 3 4789999999999999998876543 4688899998766543
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.5e-09 Score=81.39 Aligned_cols=100 Identities=19% Similarity=0.282 Sum_probs=79.7
Q ss_pred CeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC-CcE
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-GAV 121 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~ 121 (299)
|+|.++|+.++.... | ..+...+.+...|+..+.||.|.... ...+++++++...+.|..... .++
T Consensus 1 ~pLF~fhp~~G~~~~------~-~~L~~~l~~~~~v~~l~a~g~~~~~~------~~~~l~~~a~~yv~~Ir~~QP~GPy 67 (257)
T COG3319 1 PPLFCFHPAGGSVLA------Y-APLAAALGPLLPVYGLQAPGYGAGEQ------PFASLDDMAAAYVAAIRRVQPEGPY 67 (257)
T ss_pred CCEEEEcCCCCcHHH------H-HHHHHHhccCceeeccccCccccccc------ccCCHHHHHHHHHHHHHHhCCCCCE
Confidence 579999999888744 3 33355667779999999999984321 247899999988777776654 799
Q ss_pred EEEeeCccHHHHHHHHHHc---cCcccEEEEecCCCC
Q 022316 122 MCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCK 155 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~---p~~v~~lvl~~~~~~ 155 (299)
+|+|||+||.+|+.+|.+- .+.|..++++++.+.
T Consensus 68 ~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 68 VLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999999999999864 356999999999887
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.98 E-value=5e-09 Score=83.71 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=56.7
Q ss_pred CCCeEEEecccccchhhhc---------cccccC---chhhhcccCceEEEEECCCCCCCCCCCCCC-CCCcccHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCF---------QGLFFC---PEACSLLLHNFCIYHINPPGHEFGAAAISD-DEPVLSVDDLAD 107 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~---------~~~~w~---~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~~~ 107 (299)
..|+||++||=+.+....- ...++. ....++..+||-|+++|.+|+|+....... ....++...++.
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 4578999998665432210 000111 112345567999999999999965432211 111122222222
Q ss_pred H---------------H---HHHHHhcC---CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCC
Q 022316 108 Q---------------I---AEVLNHFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (299)
Q Consensus 108 ~---------------l---~~~l~~l~---~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 153 (299)
. . .++|..+. .+++.++|+||||..++.+|+.- ++|+..|..+..
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 1 1 22333332 26899999999999999998876 589888877653
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.5e-10 Score=83.40 Aligned_cols=50 Identities=16% Similarity=0.362 Sum_probs=37.6
Q ss_pred HHHHHHHHHhc-CC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 106 ADQIAEVLNHF-GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 106 ~~~l~~~l~~l-~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
.+...++|... .+ +++.|+|.|.||-+|+.+|..+| .|+++|.++|+...
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 34444555444 22 68999999999999999999998 79999999987654
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.5e-08 Score=88.09 Aligned_cols=210 Identities=11% Similarity=0.041 Sum_probs=127.1
Q ss_pred cceeecCCceEEEEeccCC------CCCeEEEecccccchhhhcc-ccccCchhhhcccCceEEEEECCCCCCCCCCC--
Q 022316 22 DNLIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQ-GLFFCPEACSLLLHNFCIYHINPPGHEFGAAA-- 92 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~-~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~-- 92 (299)
...+..++....+...-|+ +-|.+|.+||.+.+...... ..-|... -....|+.|+.+|.||.|.....
T Consensus 500 ~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~ 577 (755)
T KOG2100|consen 500 FGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFR 577 (755)
T ss_pred eEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHH
Confidence 3445556667666655432 34677778888763322111 1113111 22345999999999999854322
Q ss_pred --CCCCCCcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcc-cEEEEecCCCCCcchhHHHHhhh
Q 022316 93 --ISDDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRV-LGLILVSPLCKAPSWTEWLYNKV 167 (299)
Q Consensus 93 --~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v-~~lvl~~~~~~~~~~~~~~~~~~ 167 (299)
.+.+-+....+|....+..+++..-+ +++.++|+|.||.+++..+...|+.+ ++.+.++|...........
T Consensus 578 ~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~---- 653 (755)
T KOG2100|consen 578 SALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTY---- 653 (755)
T ss_pred HHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccc----
Confidence 12233456778888888888776533 68999999999999999999998554 5559999876543111100
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccE-E
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS-L 246 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-l 246 (299)
..++.+.. .+....+.+ ......+..++.|. |
T Consensus 654 ------------------terymg~p---------~~~~~~y~e--------------------~~~~~~~~~~~~~~~L 686 (755)
T KOG2100|consen 654 ------------------TERYMGLP---------SENDKGYEE--------------------SSVSSPANNIKTPKLL 686 (755)
T ss_pred ------------------cHhhcCCC---------ccccchhhh--------------------ccccchhhhhccCCEE
Confidence 00111100 000000111 22333345566665 9
Q ss_pred EEecCCCcch--hhhHHHhhhcc--ccCceEEEEcCchhhhH
Q 022316 247 IFVGESSPFH--SEAVHMTSKID--RRYSALVEVWTRVYISL 284 (299)
Q Consensus 247 ii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~~ 284 (299)
++||+.|..| +.+.++.+.+. +-.+.+.++|+..|...
T Consensus 687 liHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is 728 (755)
T KOG2100|consen 687 LIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGIS 728 (755)
T ss_pred EEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccc
Confidence 9999999998 77777777663 33478999999999543
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.6e-08 Score=70.31 Aligned_cols=155 Identities=17% Similarity=0.173 Sum_probs=102.0
Q ss_pred CeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEE
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVM 122 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 122 (299)
+.+|++||+..++....+.. | ...+.. +-.+++.- -.....+|+.+.+.+.+... .++++
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~-w----e~~l~~---a~rveq~~-----------w~~P~~~dWi~~l~~~v~a~-~~~~v 62 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSR-W----ESALPN---ARRVEQDD-----------WEAPVLDDWIARLEKEVNAA-EGPVV 62 (181)
T ss_pred ceEEEecCCCCCChhHHHHH-H----HhhCcc---chhcccCC-----------CCCCCHHHHHHHHHHHHhcc-CCCeE
Confidence 56899999998885543322 3 333222 22222221 12358899999999988887 46799
Q ss_pred EEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCc
Q 022316 123 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 202 (299)
Q Consensus 123 lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (299)
||+||+|+..++.++.+....|+|+.+++|+........ . . . ...|++.
T Consensus 63 lVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~-----------------~---~-~-~~tf~~~--------- 111 (181)
T COG3545 63 LVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR-----------------P---K-H-LMTFDPI--------- 111 (181)
T ss_pred EEEecccHHHHHHHHHhhhhccceEEEecCCCccccccc-----------------h---h-h-ccccCCC---------
Confidence 999999999999999988778999999998653221000 0 0 0 0001100
Q ss_pred hHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCch
Q 022316 203 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRV 280 (299)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 280 (299)
......-|.+++...+|+++ +.+..+++..+ ..++...++|
T Consensus 112 ----------------------------------p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg---s~lv~~g~~G 154 (181)
T COG3545 112 ----------------------------------PREPLPFPSVVVASRNDPYVSYEHAEDLANAWG---SALVDVGEGG 154 (181)
T ss_pred ----------------------------------ccccCCCceeEEEecCCCCCCHHHHHHHHHhcc---Hhheeccccc
Confidence 01234568999999999998 67777777664 4478888888
Q ss_pred hhhHh
Q 022316 281 YISLL 285 (299)
Q Consensus 281 H~~~~ 285 (299)
|.-..
T Consensus 155 HiN~~ 159 (181)
T COG3545 155 HINAE 159 (181)
T ss_pred ccchh
Confidence 86544
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.8e-09 Score=89.84 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=67.3
Q ss_pred cccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHcc
Q 022316 62 LFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (299)
Q Consensus 62 ~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p 141 (299)
.+|...+..+...||.+ ..|++|+|.+-.... .....++++.+.++++.+..+.++++|+||||||.++..++..+|
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~--~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN--RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCccccc--cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 34645544444557655 899999997743211 112345667777777777778899999999999999999999888
Q ss_pred Cc----ccEEEEecCCCCCc
Q 022316 142 HR----VLGLILVSPLCKAP 157 (299)
Q Consensus 142 ~~----v~~lvl~~~~~~~~ 157 (299)
+. |+++|.++++....
T Consensus 185 ~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HhHHhHhccEEEECCCCCCC
Confidence 64 78999998876553
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.3e-08 Score=74.52 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=72.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCC--CC---CCCCCcccHHHHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAA--AI---SDDEPVLSVDDLADQIAEVLN 114 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~--~~---~~~~~~~~~~~~~~~l~~~l~ 114 (299)
+.|.||++||.+.+........-| ..+. ..||-|+.++......... .. ...........+++.+..+.+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~----~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~ 90 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGW----NALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAA 90 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCH----HHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhh
Confidence 357899999999887653332223 2222 3589999998643211110 00 000111223334444555666
Q ss_pred hcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 115 HFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 115 ~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
..++ .++++.|+|.||+.+..++..+|+.+.++..++..+..
T Consensus 91 ~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~ 134 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYG 134 (220)
T ss_pred hcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccc
Confidence 6665 58999999999999999999999999998888876543
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.5e-08 Score=77.43 Aligned_cols=106 Identities=16% Similarity=0.158 Sum_probs=67.7
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHH-Hh---
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL-NH--- 115 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l-~~--- 115 (299)
++-|++||+||+...... +...+.+..+.||-|+.+|+...+... .........++.+.+.+=+ ..
T Consensus 15 g~yPVv~f~~G~~~~~s~------Ys~ll~hvAShGyIVV~~d~~~~~~~~----~~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSW------YSQLLEHVASHGYIVVAPDLYSIGGPD----DTDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CCcCEEEEeCCcCCCHHH------HHHHHHHHHhCceEEEEecccccCCCC----cchhHHHHHHHHHHHHhcchhhccc
Confidence 356899999999844322 223334555669999999976653211 0011122222222222211 11
Q ss_pred ---cCCCcEEEEeeCccHHHHHHHHHHc-----cCcccEEEEecCCCC
Q 022316 116 ---FGLGAVMCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCK 155 (299)
Q Consensus 116 ---l~~~~~~lvG~S~Gg~va~~~a~~~-----p~~v~~lvl~~~~~~ 155 (299)
.+..++.|.|||-||-+|..++..+ +.+++++++++|...
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 1346899999999999999999887 568999999999763
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.4e-08 Score=70.72 Aligned_cols=197 Identities=9% Similarity=0.059 Sum_probs=113.6
Q ss_pred CCceEEEEeccC-CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 28 SHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 28 ~~~~l~~~~~g~-~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
.+++-.+.++|+ ...+..||+||.-..... .... ...+..++..||+|..+++ |.+.. . ..-..++.+..
T Consensus 52 ~~g~q~VDIwg~~~~~klfIfIHGGYW~~g~--rk~c-lsiv~~a~~~gY~vasvgY---~l~~q--~-htL~qt~~~~~ 122 (270)
T KOG4627|consen 52 EGGRQLVDIWGSTNQAKLFIFIHGGYWQEGD--RKMC-LSIVGPAVRRGYRVASVGY---NLCPQ--V-HTLEQTMTQFT 122 (270)
T ss_pred CCCceEEEEecCCCCccEEEEEecchhhcCc--hhcc-cchhhhhhhcCeEEEEecc---CcCcc--c-ccHHHHHHHHH
Confidence 455667778885 456789999985332211 1111 1233455677999998865 33421 0 01123444555
Q ss_pred HHHHHHHHhcCC-CcEEEEeeCccHHHHHHHHH-HccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHH
Q 022316 107 DQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAM-KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184 (299)
Q Consensus 107 ~~l~~~l~~l~~-~~~~lvG~S~Gg~va~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (299)
.-+.-+++...- +.+.+.|||.|+.+|..... .+..+|.++++.++.........
T Consensus 123 ~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~----------------------- 179 (270)
T KOG4627|consen 123 HGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSN----------------------- 179 (270)
T ss_pred HHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhC-----------------------
Confidence 555555666543 56789999999999876554 45557877777665332111000
Q ss_pred HHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHH
Q 022316 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 262 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~ 262 (299)
.-.+.+.. - +.+.. + ........+..+++|+|++.|++|.-. +..+.+
T Consensus 180 ---te~g~dlg-L----t~~~a----e------------------~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf 229 (270)
T KOG4627|consen 180 ---TESGNDLG-L----TERNA----E------------------SVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDF 229 (270)
T ss_pred ---CccccccC-c----ccchh----h------------------hcCccHHHhcCceeeeeEeeecccCcHHHHhhhhH
Confidence 00000000 0 00000 0 001112335678899999999999653 888888
Q ss_pred hhhccccCceEEEEcCchhhhHhHHH
Q 022316 263 TSKIDRRYSALVEVWTRVYISLLGFL 288 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~H~~~~~f~ 288 (299)
.+.+.. +.+.++++.+|.-+.+-+
T Consensus 230 ~~q~~~--a~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 230 ADQLRK--ASFTLFKNYDHYDIIEET 253 (270)
T ss_pred HHHhhh--cceeecCCcchhhHHHHh
Confidence 887743 889999999999877643
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.7e-09 Score=81.35 Aligned_cols=91 Identities=19% Similarity=0.161 Sum_probs=51.4
Q ss_pred CeEEEecccccchhhhccccccCchhhhcccCceE---EEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCC
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC---IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (299)
.||||+||.+.+... . |......+.++||. |+++++-....+...........+..++++-|..++++.+.
T Consensus 2 ~PVVlVHG~~~~~~~----~-w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa- 75 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYS----N-WSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA- 75 (219)
T ss_dssp --EEEE--TTTTTCG----G-CCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT--
T ss_pred CCEEEECCCCcchhh----C-HHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-
Confidence 369999999875433 2 65565666678999 89999844432111000000012235677777777888898
Q ss_pred cEEEEeeCccHHHHHHHHHH
Q 022316 120 AVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~ 139 (299)
+|.||||||||.++-.+...
T Consensus 76 kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHH
T ss_pred EEEEEEcCCcCHHHHHHHHH
Confidence 99999999999988877653
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.9e-08 Score=70.01 Aligned_cols=177 Identities=15% Similarity=0.126 Sum_probs=109.5
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCC------------CCCC--CCCcccHHHHHH
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA------------AISD--DEPVLSVDDLAD 107 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~------------~~~~--~~~~~~~~~~~~ 107 (299)
..+||++||.+.++.+ |.+.+..+--++.+-|+|..|-.--+.. .... ......+...++
T Consensus 3 ~atIi~LHglGDsg~~------~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~ 76 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG------WAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAAD 76 (206)
T ss_pred eEEEEEEecCCCCCcc------HHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHH
Confidence 3479999999999877 4333333333466666664332211100 0000 001234455556
Q ss_pred HHHHHHHhc---C--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHH
Q 022316 108 QIAEVLNHF---G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (299)
Q Consensus 108 ~l~~~l~~l---~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
.+..++++. + ..++.+-|.|+||++++..+..+|..+.++....+......
T Consensus 77 ~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~------------------------ 132 (206)
T KOG2112|consen 77 NIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRAS------------------------ 132 (206)
T ss_pred HHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccch------------------------
Confidence 666666542 3 36799999999999999999999877777665444221000
Q ss_pred HHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-----h
Q 022316 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-----S 257 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~-----~ 257 (299)
. .+..+. ...+ ..|++..||+.|++| +
T Consensus 133 ~-~~~~~~---------------------------------------~~~~--------~~~i~~~Hg~~d~~vp~~~g~ 164 (206)
T KOG2112|consen 133 I-GLPGWL---------------------------------------PGVN--------YTPILLCHGTADPLVPFRFGE 164 (206)
T ss_pred h-hccCCc---------------------------------------cccC--------cchhheecccCCceeehHHHH
Confidence 0 000000 0000 569999999999998 4
Q ss_pred hhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 258 EAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
.+.+........ +++..+++.+|....+-++.+..|++.
T Consensus 165 ~s~~~l~~~~~~-~~f~~y~g~~h~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 165 KSAQFLKSLGVR-VTFKPYPGLGHSTSPQELDDLKSWIKT 203 (206)
T ss_pred HHHHHHHHcCCc-eeeeecCCccccccHHHHHHHHHHHHH
Confidence 455555555555 899999999999998888888888764
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.6e-08 Score=77.69 Aligned_cols=114 Identities=14% Similarity=0.086 Sum_probs=69.1
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCC-CCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-AISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
+++..+||+||+..+........ .++...+.-.-.++.+.||..|.-.. .........+-..+++-|..+.+..+.
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~---aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~ 92 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRA---AQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI 92 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHH---HHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC
Confidence 36779999999988754432222 22333333333899999999884211 000011122333344444444444467
Q ss_pred CcEEEEeeCccHHHHHHHHHH----cc-----CcccEEEEecCCCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMK----YR-----HRVLGLILVSPLCKA 156 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~----~p-----~~v~~lvl~~~~~~~ 156 (299)
++++|++||||+.+.+..... .+ .++..+++++|-...
T Consensus 93 ~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 93 KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 899999999999998876543 21 357888998876554
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.83 E-value=2e-08 Score=76.30 Aligned_cols=167 Identities=14% Similarity=0.117 Sum_probs=81.7
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCC-----CCCCC----------CCC-----C----
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGH-----EFGAA----------AIS-----D---- 95 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~-----G~S~~----------~~~-----~---- 95 (299)
.++-||++||.+.|+....... ..+...|.+ ++.++.+|-|-- |-... ..+ .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~---~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQT---SALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHT---HHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCCcCHHHHHHHH---HHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 4678999999999986633322 344556666 899988884422 11100 000 0
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHcc--------CcccEEEEecCCCCCcchhHHHHhhh
Q 022316 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR--------HRVLGLILVSPLCKAPSWTEWLYNKV 167 (299)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p--------~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (299)
......+++..+.|.+.++..+. -..|+|+|.||.+|..++.... ..++-+|++++.......
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred cccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 00123355555666666666542 3469999999999998886432 235667776653321110
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEE
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 247 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~li 247 (299)
. .+.. .-.+|++|+|.
T Consensus 151 --------------------------~-------------------------------------~~~~-~~~~i~iPtlH 166 (212)
T PF03959_consen 151 --------------------------Y-------------------------------------QELY-DEPKISIPTLH 166 (212)
T ss_dssp --------------------------G-------------------------------------TTTT---TT---EEEE
T ss_pred --------------------------h-------------------------------------hhhh-ccccCCCCeEE
Confidence 0 0000 22467899999
Q ss_pred EecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHh
Q 022316 248 FVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLL 285 (299)
Q Consensus 248 i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 285 (299)
|+|++|.++ +.++.+.+...+. . .+..-+.||.+..
T Consensus 167 v~G~~D~~~~~~~s~~L~~~~~~~-~-~v~~h~gGH~vP~ 204 (212)
T PF03959_consen 167 VIGENDPVVPPERSEALAEMFDPD-A-RVIEHDGGHHVPR 204 (212)
T ss_dssp EEETT-SSS-HHHHHHHHHHHHHH-E-EEEEESSSSS---
T ss_pred EEeCCCCCcchHHHHHHHHhccCC-c-EEEEECCCCcCcC
Confidence 999999998 4777888877554 4 4444456676543
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.1e-08 Score=81.56 Aligned_cols=36 Identities=19% Similarity=0.127 Sum_probs=26.3
Q ss_pred CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 118 ~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
.+++.++|||+||+.++..+.+. .++++.|++++..
T Consensus 227 ~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWM 262 (379)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH--TT--EEEEES---
T ss_pred hhheeeeecCchHHHHHHHHhhc-cCcceEEEeCCcc
Confidence 35789999999999999887765 6799999999844
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.6e-07 Score=79.33 Aligned_cols=132 Identities=12% Similarity=0.101 Sum_probs=82.7
Q ss_pred ceeecCC-ceEEEEeccC---CCCCeEEEec--ccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 23 NLIKTSH-GSLSVTIYGD---QDKPALVTYP--DLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 23 ~~i~~~~-~~l~~~~~g~---~~~p~lvl~H--G~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
..|+.++ .+|...++-+ ++.|+++..+ ....+.........-.+.-....++||.|+..|.||.|.|.......
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~ 101 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPE 101 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccccee
Confidence 4566654 4887666644 4567777776 22222111111110111111356789999999999999997644321
Q ss_pred CCcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 97 EPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
.. ...+| ..|+.+++..... .+|..+|.|++|...+.+|+..|..++.++-..+....
T Consensus 102 ~~-~E~~D-g~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 102 SS-REAED-GYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred cc-ccccc-hhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 11 11222 2355555555544 78999999999999999999999889998888776654
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.3e-07 Score=72.53 Aligned_cols=131 Identities=16% Similarity=0.148 Sum_probs=91.7
Q ss_pred CCcceeecCCceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECC-------CCCC
Q 022316 20 GKDNLIKTSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINP-------PGHE 87 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~-------~G~G 87 (299)
.+...+..++.+.+|+.+-+ .+.|.||++||...++.......-|. ++. ..||-|+.+|- .++|
T Consensus 35 ~~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d----~lAd~~gFlV~yPdg~~~~wn~~~~~ 110 (312)
T COG3509 35 SSVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWD----ALADREGFLVAYPDGYDRAWNANGCG 110 (312)
T ss_pred CCccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchh----hhhcccCcEEECcCccccccCCCccc
Confidence 34456667777777776654 24568899999999887766555462 222 35999999861 2222
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHHHHHhcCCC--cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 88 FGAAAISDDEPVLSVDDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 88 ~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~--~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
.+..+............+++.+..++...+++ +|++.|.|-||..+..++..+|+.+.++..+++..
T Consensus 111 ~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 111 NWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 23112111233345666677777777788885 89999999999999999999999999988888765
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.3e-06 Score=66.46 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=61.7
Q ss_pred hhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHH-HhcCCCcEEEEeeCccHHHHHHHHHH---ccC
Q 022316 67 EACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL-NHFGLGAVMCMGVTAGAYILTLFAMK---YRH 142 (299)
Q Consensus 67 ~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l-~~l~~~~~~lvG~S~Gg~va~~~a~~---~p~ 142 (299)
.+...+...+.|+++|.+|+|.+... ..+++++++.+...+ +.....+++++|||+||.++..++.+ .+.
T Consensus 17 ~~~~~l~~~~~v~~~~~~g~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~ 90 (212)
T smart00824 17 RLAAALRGRRDVSALPLPGFGPGEPL------PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGI 90 (212)
T ss_pred HHHHhcCCCccEEEecCCCCCCCCCC------CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCC
Confidence 34566677899999999999865321 246777777655544 34445789999999999999998886 356
Q ss_pred cccEEEEecCCCC
Q 022316 143 RVLGLILVSPLCK 155 (299)
Q Consensus 143 ~v~~lvl~~~~~~ 155 (299)
.+.+++++++...
T Consensus 91 ~~~~l~~~~~~~~ 103 (212)
T smart00824 91 PPAAVVLLDTYPP 103 (212)
T ss_pred CCcEEEEEccCCC
Confidence 6899998887553
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.8e-07 Score=67.02 Aligned_cols=47 Identities=9% Similarity=-0.039 Sum_probs=33.6
Q ss_pred hccccccEEEEecCCCcch--hhhHHHhhhcccc---CceEEEEcCchhhhH
Q 022316 238 LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR---YSALVEVWTRVYISL 284 (299)
Q Consensus 238 ~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~---~~~~~~~~~~~H~~~ 284 (299)
..++++|+|++.|+.|.++ +...++.+++... ...+.++++.+|--+
T Consensus 160 ~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 160 IANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred HhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 4567899999999999996 4444444444322 246899999999655
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.4e-09 Score=83.37 Aligned_cols=109 Identities=13% Similarity=0.146 Sum_probs=63.4
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhh-ccc---CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACS-LLL---HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~-~l~---~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (299)
.+.|++|++||+..+.... . |...+.. ++. .++.||++|+...-.. ... ..........+.|..+|+.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~---~-~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~--~a~~n~~~vg~~la~~l~~ 140 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSE---S-WIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYP--QAVANTRLVGRQLAKFLSF 140 (331)
T ss_dssp TTSEEEEEE--TT-TT-TT---T-HHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HH--HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccch---h-HHHHHHHHHHhhccCCceEEEEcchhhccc--ccc--chhhhHHHHHHHHHHHHHH
Confidence 3678999999998887221 1 3233333 344 4899999999643111 000 0011233344444444433
Q ss_pred ----c--CCCcEEEEeeCccHHHHHHHHHHccC--cccEEEEecCCCCC
Q 022316 116 ----F--GLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKA 156 (299)
Q Consensus 116 ----l--~~~~~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~ 156 (299)
. ..++++|||||+||.||-..+..... +|.+++.++|+.+.
T Consensus 141 L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 141 LINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp HHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred HHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 2 34799999999999999988888777 89999999998765
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.74 E-value=1e-07 Score=75.85 Aligned_cols=88 Identities=15% Similarity=0.123 Sum_probs=53.3
Q ss_pred chhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC---CcEEEEeeCccHHHHHHHHHH---
Q 022316 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMK--- 139 (299)
Q Consensus 66 ~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~lvG~S~Gg~va~~~a~~--- 139 (299)
..+...|.+||.|+++|+.|.|..-. ......+..-|.++...++....++ .++.++|||-||.-++..|..
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~y~--~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~ 94 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTPYL--NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPS 94 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCccc--CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHH
Confidence 34567788999999999999986211 0111223333334444443333343 579999999999987655533
Q ss_pred -ccCc---ccEEEEecCCCC
Q 022316 140 -YRHR---VLGLILVSPLCK 155 (299)
Q Consensus 140 -~p~~---v~~lvl~~~~~~ 155 (299)
-|+. +.+.+..+++..
T Consensus 95 YApeL~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 95 YAPELNRDLVGAAAGGPPAD 114 (290)
T ss_pred hCcccccceeEEeccCCccC
Confidence 2443 566666555443
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.6e-06 Score=62.62 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=30.2
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
+++.|||.|+||+.|..+|.++. + +.|+++|+..+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 57999999999999999999985 3 56889998765
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.4e-08 Score=80.53 Aligned_cols=55 Identities=20% Similarity=0.152 Sum_probs=42.7
Q ss_pred hhhccccccEEEEecCCCcch---hhhHHHhhhccccCceEEEEcCchhhhHhHHHHH
Q 022316 236 EGLRKLQCRSLIFVGESSPFH---SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVL 290 (299)
Q Consensus 236 ~~~~~i~~P~lii~G~~D~~~---~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~ 290 (299)
..+.+++.|++++.|..|.+. .....-...+++....+..+|++.|.-+++.-+.
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 457889999999999999864 5555566667765567889999999987765444
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.2e-07 Score=67.25 Aligned_cols=81 Identities=19% Similarity=0.301 Sum_probs=57.7
Q ss_pred hhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHH----HhcCCCcEEEEeeCccHHHHHHHHHHcc
Q 022316 67 EACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (299)
Q Consensus 67 ~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l----~~l~~~~~~lvG~S~Gg~va~~~a~~~p 141 (299)
.+...| ++|+.|+.+|-+=+=.+. -+.++.+.|+..++ ++.+.+++.|+|.|+|+-+......+.|
T Consensus 20 ~~a~~l~~~G~~VvGvdsl~Yfw~~---------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp 90 (192)
T PF06057_consen 20 QIAEALAKQGVPVVGVDSLRYFWSE---------RTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLP 90 (192)
T ss_pred HHHHHHHHCCCeEEEechHHHHhhh---------CCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCC
Confidence 334444 569999999965543331 34455556665555 4557789999999999998888777776
Q ss_pred C----cccEEEEecCCCCC
Q 022316 142 H----RVLGLILVSPLCKA 156 (299)
Q Consensus 142 ~----~v~~lvl~~~~~~~ 156 (299)
. +|+.++++++....
T Consensus 91 ~~~r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 91 AALRARVAQVVLLSPSTTA 109 (192)
T ss_pred HHHHhheeEEEEeccCCcc
Confidence 4 68999999986543
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=8.1e-07 Score=75.35 Aligned_cols=132 Identities=11% Similarity=0.081 Sum_probs=83.4
Q ss_pred ceeecC----CceEEEEeccC----CCCCeEEEecccccchhhhccccccCchh-----------hhcccCceEEEEECC
Q 022316 23 NLIKTS----HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEA-----------CSLLLHNFCIYHINP 83 (299)
Q Consensus 23 ~~i~~~----~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~-----------~~~l~~~~~vi~~D~ 83 (299)
-++.++ +..+.|..+.. .+.|+|+.++|.++.+.....-.-..|.. ..-..+...++.+|.
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDq 129 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQ 129 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeC
Confidence 355553 34677766542 35789999999877654321000000110 011233467999997
Q ss_pred C-CCCCCCCCCCCCCCcccHHHHHHHHHHHHHh-------cCCCcEEEEeeCccHHHHHHHHHHcc----------Cccc
Q 022316 84 P-GHEFGAAAISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKYR----------HRVL 145 (299)
Q Consensus 84 ~-G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~-------l~~~~~~lvG~S~Gg~va~~~a~~~p----------~~v~ 145 (299)
| |+|.|..... ....+.++.++|+.++++. ++..+++|+|||+||.++..+|.+-- -.++
T Consensus 130 P~G~G~S~~~~~--~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLk 207 (462)
T PTZ00472 130 PAGVGFSYADKA--DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLA 207 (462)
T ss_pred CCCcCcccCCCC--CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeE
Confidence 5 8888865332 1235667888888888873 34478999999999999988887531 1378
Q ss_pred EEEEecCCCCC
Q 022316 146 GLILVSPLCKA 156 (299)
Q Consensus 146 ~lvl~~~~~~~ 156 (299)
++++-++....
T Consensus 208 Gi~IGNg~~dp 218 (462)
T PTZ00472 208 GLAVGNGLTDP 218 (462)
T ss_pred EEEEeccccCh
Confidence 88888876543
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.9e-06 Score=68.17 Aligned_cols=82 Identities=15% Similarity=0.116 Sum_probs=62.2
Q ss_pred chhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC-----CCcEEEEeeCccHHHHHHHHHHc
Q 022316 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 66 ~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
..+-..+..|+.||.+.+.-. +. +..|++|.+.....+++.+. ..+++|+|-|-||..++.+|+.+
T Consensus 91 SevG~AL~~GHPvYFV~F~p~-----P~----pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~ 161 (581)
T PF11339_consen 91 SEVGVALRAGHPVYFVGFFPE-----PE----PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALR 161 (581)
T ss_pred cHHHHHHHcCCCeEEEEecCC-----CC----CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcC
Confidence 455667788999998875421 22 24688888877777765542 24899999999999999999999
Q ss_pred cCcccEEEEecCCCCC
Q 022316 141 RHRVLGLILVSPLCKA 156 (299)
Q Consensus 141 p~~v~~lvl~~~~~~~ 156 (299)
|+.+..+|+-+++...
T Consensus 162 Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 162 PDLVGPLVLAGAPLSY 177 (581)
T ss_pred cCccCceeecCCCccc
Confidence 9999998888876543
|
Their function is unknown. |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.5e-07 Score=69.39 Aligned_cols=82 Identities=15% Similarity=0.244 Sum_probs=60.0
Q ss_pred cccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEE
Q 022316 71 LLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLI 148 (299)
Q Consensus 71 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lv 148 (299)
.+.-||.|+.+++||++.|..... +..+....-.-+.-.+..++. +.+++.|+|.||.-+...|..||+ |+++|
T Consensus 264 P~~lgYsvLGwNhPGFagSTG~P~---p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-Vkavv 339 (517)
T KOG1553|consen 264 PAQLGYSVLGWNHPGFAGSTGLPY---PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVV 339 (517)
T ss_pred hHHhCceeeccCCCCccccCCCCC---cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEE
Confidence 345699999999999998865221 223333332333445677775 679999999999999999999996 89999
Q ss_pred EecCCCCC
Q 022316 149 LVSPLCKA 156 (299)
Q Consensus 149 l~~~~~~~ 156 (299)
+-++.-..
T Consensus 340 LDAtFDDl 347 (517)
T KOG1553|consen 340 LDATFDDL 347 (517)
T ss_pred eecchhhh
Confidence 87765443
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.2e-07 Score=69.95 Aligned_cols=103 Identities=15% Similarity=0.197 Sum_probs=65.7
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHH----Hhc
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL----NHF 116 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l----~~l 116 (299)
.-|+|+|+||+..... + +.+.+....+.||-|+++++-.. .. + .....++ .++.+.+++ .++
T Consensus 45 ~yPVilF~HG~~l~ns-----~-Ys~lL~HIASHGfIVVAPQl~~~--~~---p--~~~~Ei~-~aa~V~~WL~~gL~~~ 110 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNS-----F-YSQLLAHIASHGFIVVAPQLYTL--FP---P--DGQDEIK-SAASVINWLPEGLQHV 110 (307)
T ss_pred CccEEEEeechhhhhH-----H-HHHHHHHHhhcCeEEEechhhcc--cC---C--CchHHHH-HHHHHHHHHHhhhhhh
Confidence 5689999999876631 2 22333444456999999998753 21 1 1111222 222232322 221
Q ss_pred -------CCCcEEEEeeCccHHHHHHHHHHcc-C-cccEEEEecCCCCCc
Q 022316 117 -------GLGAVMCMGVTAGAYILTLFAMKYR-H-RVLGLILVSPLCKAP 157 (299)
Q Consensus 117 -------~~~~~~lvG~S~Gg~va~~~a~~~p-~-~v~~lvl~~~~~~~~ 157 (299)
++.++.++|||.||-.|..+|..+. + .+++||-++|.....
T Consensus 111 Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 111 LPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred CCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 3468999999999999999998773 2 388899999876653
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.3e-06 Score=65.68 Aligned_cols=117 Identities=11% Similarity=0.162 Sum_probs=72.4
Q ss_pred CCceEEEEeccCC------CC-CeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCC---CCCC--CCC-
Q 022316 28 SHGSLSVTIYGDQ------DK-PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE---FGAA--AIS- 94 (299)
Q Consensus 28 ~~~~l~~~~~g~~------~~-p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G---~S~~--~~~- 94 (299)
-+.+|.|+.+-|. +- |.+||+||.|..+.... ..+..|.--++++.|-.+ .+.. +.-
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~----------~~l~sg~gaiawa~pedqcfVlAPQy~~if~ 239 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND----------KVLSSGIGAIAWAGPEDQCFVLAPQYNPIFA 239 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh----------hhhhcCccceeeecccCceEEEccccccccc
Confidence 3558888877651 23 88999999988775522 222333334444443333 0000 000
Q ss_pred --CCCCcccHHHHHHHHH-HHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 95 --DDEPVLSVDDLADQIA-EVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 95 --~~~~~~~~~~~~~~l~-~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
......-.....+.+. .+.++.++ .++.++|.|+||+-++.++.++|+.+++.++++...
T Consensus 240 d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 240 DSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred ccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 0011122333444444 34466666 589999999999999999999999999999998744
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.47 E-value=7.2e-07 Score=69.01 Aligned_cols=57 Identities=14% Similarity=0.237 Sum_probs=42.2
Q ss_pred ccHHHHHHHHHHHHHh----cCCCcEEEEeeCccHHHHHHHHHHccC-----cccEEEEecCCCCC
Q 022316 100 LSVDDLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKA 156 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~----l~~~~~~lvG~S~Gg~va~~~a~~~p~-----~v~~lvl~~~~~~~ 156 (299)
.+....++.+..++.. .+++++.+|||||||..++.++..+.. .|.++|.|+++...
T Consensus 80 ~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 80 ANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 3677777777776654 477899999999999999999887532 58999999986654
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.6e-07 Score=72.11 Aligned_cols=105 Identities=18% Similarity=0.215 Sum_probs=75.5
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceE---EEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC---IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
.-++|++||++.+... +... ...+-..|+. ++++++++-... ......-+.+..-+.+++...+.
T Consensus 59 ~~pivlVhG~~~~~~~-~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~~~~ql~~~V~~~l~~~ga 126 (336)
T COG1075 59 KEPIVLVHGLGGGYGN-FLPL-----DYRLAILGWLTNGVYAFELSGGDGT------YSLAVRGEQLFAYVDEVLAKTGA 126 (336)
T ss_pred CceEEEEccCcCCcch-hhhh-----hhhhcchHHHhcccccccccccCCC------ccccccHHHHHHHHHHHHhhcCC
Confidence 3389999998554433 2222 1122233666 888888866111 11235667777888888888888
Q ss_pred CcEEEEeeCccHHHHHHHHHHcc--CcccEEEEecCCCCCcc
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYR--HRVLGLILVSPLCKAPS 158 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p--~~v~~lvl~~~~~~~~~ 158 (299)
+++.|+||||||.++..++...+ .+|+.++.++++-....
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTE 168 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCch
Confidence 99999999999999999998888 88999999998776543
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.9e-06 Score=68.19 Aligned_cols=114 Identities=10% Similarity=0.041 Sum_probs=72.2
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCC-CCCCCCCcccHHHHHHHHHHHHHhcCCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-AISDDEPVLSVDDLADQIAEVLNHFGLG 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (299)
.+..+||+||+..+-...-.+. -++..........+.+.||-.|.--. ........++-.++..-|..+.+..+.+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~---aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~ 191 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRT---AQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVK 191 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHH---HHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCc
Confidence 5678999999987653321111 23344444567788999998773210 0001122345555555555555566678
Q ss_pred cEEEEeeCccHHHHHHHHHH--------ccCcccEEEEecCCCCCc
Q 022316 120 AVMCMGVTAGAYILTLFAMK--------YRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~--------~p~~v~~lvl~~~~~~~~ 157 (299)
+++|++||||.+++++...+ .+.+++.+|+.+|-....
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 99999999999999876653 234688889888866554
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.1e-05 Score=58.06 Aligned_cols=56 Identities=20% Similarity=0.180 Sum_probs=40.6
Q ss_pred ccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHh--HHHHHHHHhhhh
Q 022316 239 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLL--GFLVLLASFCES 297 (299)
Q Consensus 239 ~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~--~f~~~~~~~~~~ 297 (299)
..|++|+|-|.|+.|.++ ..+..+++..... .+.....||.+.. .+.+.+++|+.+
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a---~vl~HpggH~VP~~~~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDA---TVLEHPGGHIVPNKAKYKEKIADFIQS 219 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCC---eEEecCCCccCCCchHHHHHHHHHHHH
Confidence 468999999999999998 6678888888663 4455556786553 456666666543
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-05 Score=68.52 Aligned_cols=128 Identities=14% Similarity=0.160 Sum_probs=82.0
Q ss_pred eeecCCceEEEE-eccC------CCCCeEEEecccccchhhhccccccCch--hhhcccCceEEEEECCCCCCCCCCCC-
Q 022316 24 LIKTSHGSLSVT-IYGD------QDKPALVTYPDLALNYMSCFQGLFFCPE--ACSLLLHNFCIYHINPPGHEFGAAAI- 93 (299)
Q Consensus 24 ~i~~~~~~l~~~-~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~--~~~~l~~~~~vi~~D~~G~G~S~~~~- 93 (299)
.+.++.|.+.|- ++.+ ++-|+++++=|.+.-.... .++-|... +-.+.+.||.|+.+|-||.-.-....
T Consensus 617 ~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVn-nsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE 695 (867)
T KOG2281|consen 617 SFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVN-NSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFE 695 (867)
T ss_pred eeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEee-ccccceehhhhhhhhhcceEEEEEcCCCccccchhhH
Confidence 345555544443 3332 2357888886665422211 11112111 12344579999999999964322111
Q ss_pred ---CCCCCcccHHHHHHHHHHHHHhcCC---CcEEEEeeCccHHHHHHHHHHccCcccEEEEecC
Q 022316 94 ---SDDEPVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP 152 (299)
Q Consensus 94 ---~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~ 152 (299)
...-+...++|.++.+.-+.++.|. +++.+-|+|+||++++....++|+-++..|.-+|
T Consensus 696 ~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGap 760 (867)
T KOG2281|consen 696 SHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAP 760 (867)
T ss_pred HHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCc
Confidence 1122356789999999999988764 7999999999999999999999997776665444
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.8e-06 Score=65.90 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHH
Q 022316 104 DLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAM 138 (299)
Q Consensus 104 ~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~ 138 (299)
.+++.|.+.++.... .++.+|||||||.|+-.+..
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 344455555544444 48999999999999864433
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.4e-06 Score=65.06 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHh-cCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 104 DLADQIAEVLNH-FGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 104 ~~~~~l~~~l~~-l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
-+.++|...++. +.. ++..|+|+||||..|+.++.++|+.+.+++.+++....
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 345566666644 343 23799999999999999999999999999999976543
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.3e-06 Score=63.49 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=30.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE 87 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G 87 (299)
+-|.+||-||+|++..- +......+.+.||-|.++++|-+-
T Consensus 117 k~PvvvFSHGLggsRt~------YSa~c~~LAShG~VVaavEHRD~S 157 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTL------YSAYCTSLASHGFVVAAVEHRDRS 157 (399)
T ss_pred CccEEEEecccccchhh------HHHHhhhHhhCceEEEEeecccCc
Confidence 34899999999887633 223335667789999999998874
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.4e-05 Score=56.49 Aligned_cols=109 Identities=19% Similarity=0.295 Sum_probs=71.7
Q ss_pred CCCCeEEEecccccchhhhccccccCch---hhhcccCceEEEEECCCCCCCCC---CCCC--CCCCcccHHHHHHHHHH
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPE---ACSLLLHNFCIYHINPPGHEFGA---AAIS--DDEPVLSVDDLADQIAE 111 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~---~~~~l~~~~~vi~~D~~G~G~S~---~~~~--~~~~~~~~~~~~~~l~~ 111 (299)
.+++.++++.|-++.. .|+.+. +...+.+..+++++-..||-.-. ...+ ...+.+++++.++.-.+
T Consensus 27 ~~~~li~~IpGNPG~~------gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKla 100 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLL------GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLA 100 (301)
T ss_pred CCceEEEEecCCCCch------hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHH
Confidence 4667788888776654 222222 12222334669999888885332 1111 12356789999998888
Q ss_pred HHHhcCC--CcEEEEeeCccHHHHHHHHHHcc--CcccEEEEecCCC
Q 022316 112 VLNHFGL--GAVMCMGVTAGAYILTLFAMKYR--HRVLGLILVSPLC 154 (299)
Q Consensus 112 ~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p--~~v~~lvl~~~~~ 154 (299)
+++..-. .+++++|||-|++..+.+..... -.|.+++++-|..
T Consensus 101 Fik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 101 FIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred HHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 8876533 68999999999999998876332 2478888877654
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.1e-05 Score=62.16 Aligned_cols=113 Identities=11% Similarity=-0.030 Sum_probs=66.4
Q ss_pred CcceeecCCceEEEEec---cCCCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~---g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
++..+..++..|-.... ...+...+|+.-|-+..-..-..-.+-...+.... ..+-.|+.+++||.|.|..
T Consensus 113 kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G----- 187 (365)
T PF05677_consen 113 KRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTG----- 187 (365)
T ss_pred eeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCC-----
Confidence 33455555554422222 22355688888443332211000000001112222 2478999999999999853
Q ss_pred CCcccHHHHHHHHHHHHHhcC-----C--CcEEEEeeCccHHHHHHHHHHc
Q 022316 97 EPVLSVDDLADQIAEVLNHFG-----L--GAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~-----~--~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
..+.++++.+-.+.++++. + +++.+.|||+||.|+.+.+.++
T Consensus 188 --~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 188 --PPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred --CCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 2356888887777766652 2 6799999999999998866554
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.3e-05 Score=65.52 Aligned_cols=53 Identities=8% Similarity=0.058 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHhc-----CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 102 VDDLADQIAEVLNHF-----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l-----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
.+.++++|.-.+++. +.++.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 266 ~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 266 WLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 344556666666543 22568999999999999999999999999999999853
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.7e-05 Score=64.24 Aligned_cols=111 Identities=15% Similarity=0.113 Sum_probs=73.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCC--CCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE--FGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
..|+||++||+|.--........+-..+..++. ...+++.|+.-.. .-+... ...+.+.++....+++..|.
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~y-----PtQL~qlv~~Y~~Lv~~~G~ 194 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKY-----PTQLRQLVATYDYLVESEGN 194 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcC-----chHHHHHHHHHHHHHhccCC
Confidence 469999999987543222111111122233444 5588888876553 001112 26788888888888878888
Q ss_pred CcEEEEeeCccHHHHHHHHHHc--cC---cccEEEEecCCCCCc
Q 022316 119 GAVMCMGVTAGAYILTLFAMKY--RH---RVLGLILVSPLCKAP 157 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~--p~---~v~~lvl~~~~~~~~ 157 (299)
++++|+|-|.||.+++.+.... +. .-+++|+++|.....
T Consensus 195 ~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 195 KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999999998876532 11 258999999987764
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.11 E-value=6.1e-06 Score=60.66 Aligned_cols=104 Identities=14% Similarity=0.193 Sum_probs=71.6
Q ss_pred CeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC----
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL---- 118 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~---- 118 (299)
.-|||+-|++..-..+.. -.....++...+|.++-+-++-+- ...+..++++-++|+.+++++++.
T Consensus 37 ~~vvfiGGLgdgLl~~~y---~~~L~~~lde~~wslVq~q~~Ssy-------~G~Gt~slk~D~edl~~l~~Hi~~~~fS 106 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLY---TTMLNRYLDENSWSLVQPQLRSSY-------NGYGTFSLKDDVEDLKCLLEHIQLCGFS 106 (299)
T ss_pred EEEEEEcccCCCcccccc---HHHHHHHHhhccceeeeeeccccc-------cccccccccccHHHHHHHHHHhhccCcc
Confidence 467888666654433221 123334555679999998877541 223457888899999999998764
Q ss_pred CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKA 156 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~~ 156 (299)
..++|+|||.|+.=.+.|..+ .|..|...|+.+|....
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 489999999999988777632 34557777887776544
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.1e-05 Score=68.48 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=57.2
Q ss_pred ceEEEEECCCCCCCCCCCCC---CCCCcccHHHHHHHHHHHHHhcC-------CCcEEEEeeCccHHHHHHHHHHccCcc
Q 022316 75 NFCIYHINPPGHEFGAAAIS---DDEPVLSVDDLADQIAEVLNHFG-------LGAVMCMGVTAGAYILTLFAMKYRHRV 144 (299)
Q Consensus 75 ~~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~~~~l~~~l~~l~-------~~~~~lvG~S~Gg~va~~~a~~~p~~v 144 (299)
|--++++++|.+|+|.+-.. ..-...|.++..+|+..+++.+. -.|++++|-|+||++|..+-.+||+.|
T Consensus 59 ~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~ 138 (434)
T PF05577_consen 59 GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLF 138 (434)
T ss_dssp TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-
T ss_pred CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCee
Confidence 78899999999999974211 12245688888888888886653 147999999999999999999999999
Q ss_pred cEEEEecCCCC
Q 022316 145 LGLILVSPLCK 155 (299)
Q Consensus 145 ~~lvl~~~~~~ 155 (299)
.+.+.-+++..
T Consensus 139 ~ga~ASSapv~ 149 (434)
T PF05577_consen 139 DGAWASSAPVQ 149 (434)
T ss_dssp SEEEEET--CC
T ss_pred EEEEeccceee
Confidence 99888887664
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.4e-05 Score=66.01 Aligned_cols=161 Identities=11% Similarity=0.031 Sum_probs=100.1
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHH------
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN------ 114 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~------ 114 (299)
..|.+++.||.+.-..+.+..+.| +....+..+-..+-++|++.- . +..++..-++.+..+..
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~w-qs~lsl~gevvev~tfdl~n~--i--------gG~nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSW-QSRLSLKGEVVEVPTFDLNNP--I--------GGANIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhH-HHHHhhhceeeeeccccccCC--C--------CCcchHHHHHHHHHHhhhhhhhh
Confidence 357889999998333333333446 333444455566778887653 1 11344444444444433
Q ss_pred --hcCCCcEEEEeeCccHHHHHHHHHHcc-CcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhc
Q 022316 115 --HFGLGAVMCMGVTAGAYILTLFAMKYR-HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (299)
Q Consensus 115 --~l~~~~~~lvG~S~Gg~va~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (299)
++...+++|+|.|||+.++..++.... ..|+++|.++-+........
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr------------------------------ 293 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR------------------------------ 293 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc------------------------------
Confidence 234468999999999998888776543 23788887764322110000
Q ss_pred cccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhcccc
Q 022316 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR 269 (299)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~ 269 (299)
....+.+-.++.|+|+|.|.+|..+ ...+.+.+++..
T Consensus 294 ----------------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA- 332 (784)
T KOG3253|consen 294 ----------------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA- 332 (784)
T ss_pred ----------------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-
Confidence 0111224456789999999999998 666777777764
Q ss_pred CceEEEEcCchhhh
Q 022316 270 YSALVEVWTRVYIS 283 (299)
Q Consensus 270 ~~~~~~~~~~~H~~ 283 (299)
+.+++++.+++|.+
T Consensus 333 ~~elhVI~~adhsm 346 (784)
T KOG3253|consen 333 EVELHVIGGADHSM 346 (784)
T ss_pred cceEEEecCCCccc
Confidence 37799999999853
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.2e-05 Score=67.99 Aligned_cols=108 Identities=18% Similarity=0.070 Sum_probs=66.1
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccC--ceEEEEECCC-C---CCCCCCCCCCCCCcccHHHHHHHHHHH--
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPP-G---HEFGAAAISDDEPVLSVDDLADQIAEV-- 112 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~--~~~vi~~D~~-G---~G~S~~~~~~~~~~~~~~~~~~~l~~~-- 112 (299)
+.|+||++||.+....+.... .. ..+... ++-|+++++| | +..+... ......-+.|....+.-+
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~---~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~--~~~~n~g~~D~~~al~wv~~ 166 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PG---DGLAREGDNVIVVSINYRLGVLGFLSTGDI--ELPGNYGLKDQRLALKWVQD 166 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--Ch---HHHHhcCCCEEEEEecccccccccccCCCC--CCCcchhHHHHHHHHHHHHH
Confidence 468999999987644332111 11 122222 4999999998 3 3322111 111234456665554444
Q ss_pred -HHhcCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCC
Q 022316 113 -LNHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (299)
Q Consensus 113 -l~~l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~ 155 (299)
++..+. ++++|+|+|.||..+..++.. .+.+++++|+.++...
T Consensus 167 ~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 167 NIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 444454 689999999999998877765 3456889898886554
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00027 Score=51.89 Aligned_cols=110 Identities=10% Similarity=0.096 Sum_probs=66.4
Q ss_pred CCeEEEecccccchhhhc-----------cccccCchhhhcccCceEEEEECCCC---CCCCCCCCCCCCCcccHHHHHH
Q 022316 42 KPALVTYPDLALNYMSCF-----------QGLFFCPEACSLLLHNFCIYHINPPG---HEFGAAAISDDEPVLSVDDLAD 107 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~-----------~~~~w~~~~~~~l~~~~~vi~~D~~G---~G~S~~~~~~~~~~~~~~~~~~ 107 (299)
...+||+||.|.-..+.. .+. --+.+.+..+.||.|+..+.-- +-.+. ..|..+ ..+..+.+.
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GT-QiPyi~rAv~~Gygviv~N~N~~~kfye~k-~np~ky-irt~veh~~ 177 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGT-QIPYIKRAVAEGYGVIVLNPNRERKFYEKK-RNPQKY-IRTPVEHAK 177 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCC-cChHHHHHHHcCCcEEEeCCchhhhhhhcc-cCcchh-ccchHHHHH
Confidence 347899999875332211 011 0145566677899999987541 11111 111111 123333333
Q ss_pred HH-HHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC--cccEEEEecCCC
Q 022316 108 QI-AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLC 154 (299)
Q Consensus 108 ~l-~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~ 154 (299)
-+ ..++.....+.+.++.||.||...+.+..++|+ +|.++.+.+++.
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 33 233444455889999999999999999999985 577888887763
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.87 E-value=8.2e-05 Score=56.12 Aligned_cols=105 Identities=12% Similarity=0.136 Sum_probs=65.4
Q ss_pred eEEEecccccchhhhccccccCchhhhcccCce------EEEEECCCCC----CCCCC--CCC-----CCCCcccHHHHH
Q 022316 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF------CIYHINPPGH----EFGAA--AIS-----DDEPVLSVDDLA 106 (299)
Q Consensus 44 ~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~------~vi~~D~~G~----G~S~~--~~~-----~~~~~~~~~~~~ 106 (299)
|.+|+||.+++..+. ..+...+.+.+ -++.+|--|. |.=+. ..| -.....+..++.
T Consensus 47 PTIfIhGsgG~asS~-------~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s 119 (288)
T COG4814 47 PTIFIHGSGGTASSL-------NGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQS 119 (288)
T ss_pred ceEEEecCCCChhHH-------HHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHH
Confidence 789999999887652 22223333323 2556665552 11000 001 011234566667
Q ss_pred HHHHHHHH----hcCCCcEEEEeeCccHHHHHHHHHHccC-----cccEEEEecCCCC
Q 022316 107 DQIAEVLN----HFGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCK 155 (299)
Q Consensus 107 ~~l~~~l~----~l~~~~~~lvG~S~Gg~va~~~a~~~p~-----~v~~lvl~~~~~~ 155 (299)
..+..++. +.+++++.+|||||||.-...++..+.. .+.++|.++.+..
T Consensus 120 ~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 120 KWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 76666665 4577999999999999999888887643 3889999887665
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.5e-05 Score=54.87 Aligned_cols=93 Identities=10% Similarity=0.161 Sum_probs=63.3
Q ss_pred EEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEE
Q 022316 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124 (299)
Q Consensus 45 lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lv 124 (299)
||.+||+-.+..+.-... +.+. +..|.|-.+-+.+.. .......++.++.++..++.+...|+
T Consensus 2 ilYlHGFnSSP~shka~l-----~~q~-------~~~~~~~i~y~~p~l-----~h~p~~a~~ele~~i~~~~~~~p~iv 64 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVL-----LLQF-------IDEDVRDIEYSTPHL-----PHDPQQALKELEKAVQELGDESPLIV 64 (191)
T ss_pred eEEEecCCCCcccHHHHH-----HHHH-------HhccccceeeecCCC-----CCCHHHHHHHHHHHHHHcCCCCceEE
Confidence 899999977654421111 1222 223334444343222 36788999999999999998889999
Q ss_pred eeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 125 G~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
|.|+||+.|-.++.++. +++ |+++|...+.
T Consensus 65 GssLGGY~At~l~~~~G--ira-v~~NPav~P~ 94 (191)
T COG3150 65 GSSLGGYYATWLGFLCG--IRA-VVFNPAVRPY 94 (191)
T ss_pred eecchHHHHHHHHHHhC--Chh-hhcCCCcCch
Confidence 99999999999998874 433 6677766543
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00059 Score=51.15 Aligned_cols=80 Identities=10% Similarity=0.133 Sum_probs=51.0
Q ss_pred CCeEEEecccccchhhhccccccCchhhhc-ccCceEE-EEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCC
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSL-LLHNFCI-YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~-l~~~~~v-i~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (299)
...|||.-|+|++... . ..+ +..++.| +++|+|-.- ... + -.+.+
T Consensus 11 ~~LilfF~GWg~d~~~------f----~hL~~~~~~D~l~~yDYr~l~------------~d~-----~------~~~y~ 57 (213)
T PF04301_consen 11 KELILFFAGWGMDPSP------F----SHLILPENYDVLICYDYRDLD------------FDF-----D------LSGYR 57 (213)
T ss_pred CeEEEEEecCCCChHH------h----hhccCCCCccEEEEecCcccc------------ccc-----c------cccCc
Confidence 4578999777776522 1 122 2345554 578887541 110 1 11358
Q ss_pred cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
+++|||+|||-.+|..+....| ++..|.+++.+.+
T Consensus 58 ~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 58 EIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred eEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCC
Confidence 9999999999999988765543 6777888776654
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00021 Score=56.13 Aligned_cols=103 Identities=10% Similarity=0.056 Sum_probs=66.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhccc--CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
...|+|+.||+|.+.....- ..+.+++. .|..++++.. |.+. ...-...+.+.++.+.+-+.....
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~-----~~~~~l~~~~~g~~~~~i~i---g~~~----~~s~~~~~~~Qve~vce~l~~~~~ 91 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATN-----ANFTQLLTNLSGSPGFCLEI---GNGV----GDSWLMPLTQQAEIACEKVKQMKE 91 (314)
T ss_pred CCCCeEEecCCCcccCCchH-----HHHHHHHHhCCCCceEEEEE---CCCc----cccceeCHHHHHHHHHHHHhhchh
Confidence 34579999999988654322 22233332 3566666554 3231 111224555666655555544221
Q ss_pred --CcEEEEeeCccHHHHHHHHHHccC--cccEEEEecCCCC
Q 022316 119 --GAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCK 155 (299)
Q Consensus 119 --~~~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~ 155 (299)
+-++++|+|-||.++=.++.+.|+ .|+.+|.++++..
T Consensus 92 l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 92 LSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred hhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 469999999999999999999987 5999999997643
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.72 E-value=8.4e-05 Score=61.98 Aligned_cols=55 Identities=13% Similarity=0.132 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC------cccEEEEecCCCCCc
Q 022316 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH------RVLGLILVSPLCKAP 157 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~------~v~~lvl~~~~~~~~ 157 (299)
+..+.+.|+...+.- .++++||||||||.++..+....+. .|+++|.++++....
T Consensus 103 ~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 103 FTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 344444444444333 5899999999999999999887743 499999999877543
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00083 Score=54.87 Aligned_cols=144 Identities=12% Similarity=0.116 Sum_probs=84.8
Q ss_pred CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC-CCcchhHHHHhhhhhhhHHhhc--chhHHHHHHHHhhhccc
Q 022316 117 GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC-KAPSWTEWLYNKVMSNLLYYYG--MCGVVKELLLKRYFSKE 193 (299)
Q Consensus 117 ~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 193 (299)
.+++++|.|.|==|..++..|+ ..+||++++-+.-.. .... .+....+..| ++... ..+....
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~--------~l~h~y~~yG~~ws~a~-----~dY~~~g 235 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKA--------NLEHQYRSYGGNWSFAF-----QDYYNEG 235 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHH--------HHHHHHHHhCCCCccch-----hhhhHhC
Confidence 5789999999999999999888 567888877554321 1111 1111111111 11111 1111111
Q ss_pred cccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCc
Q 022316 194 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYS 271 (299)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~ 271 (299)
. ........+...+.. .|...-..++++|.++|.|..|.+. ..+......+++. .
T Consensus 236 i------------------~~~l~tp~f~~L~~i----vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~-K 292 (367)
T PF10142_consen 236 I------------------TQQLDTPEFDKLMQI----VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGE-K 292 (367)
T ss_pred c------------------hhhcCCHHHHHHHHh----cCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCC-e
Confidence 0 001111222222222 2333334667999999999999986 7788888999874 7
Q ss_pred eEEEEcCchhhhHhH-HHHHHHHhhhh
Q 022316 272 ALVEVWTRVYISLLG-FLVLLASFCES 297 (299)
Q Consensus 272 ~~~~~~~~~H~~~~~-f~~~~~~~~~~ 297 (299)
.+..+|+++|..... .++.+.+|...
T Consensus 293 ~lr~vPN~~H~~~~~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 293 YLRYVPNAGHSLIGSDVVQSLRAFYNR 319 (367)
T ss_pred eEEeCCCCCcccchHHHHHHHHHHHHH
Confidence 899999999987753 34555666543
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00013 Score=52.55 Aligned_cols=54 Identities=17% Similarity=0.248 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHh----cCCCcEEEEeeCccHHHHHHHHHHccC----cccEEEEecCCCCC
Q 022316 103 DDLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKA 156 (299)
Q Consensus 103 ~~~~~~l~~~l~~----l~~~~~~lvG~S~Gg~va~~~a~~~p~----~v~~lvl~~~~~~~ 156 (299)
..+.+.+...++. ....+++++|||+||.+|..++..... .+..++.++++...
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 3444444444433 356899999999999999998887754 56677777776544
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00037 Score=54.78 Aligned_cols=103 Identities=7% Similarity=0.050 Sum_probs=62.9
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhccc--CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
...|||+.||+|.+..... + ..+.+++. .++.+..+. .|-|..+ .-...+.+.++.+.+-+.....
T Consensus 25 ~~~PvViwHGlgD~~~~~~--~---~~~~~~i~~~~~~pg~~v~-ig~~~~~------s~~~~~~~Qv~~vce~l~~~~~ 92 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGK--V---SNLTQFLINHSGYPGTCVE-IGNGVQD------SLFMPLRQQASIACEKIKQMKE 92 (306)
T ss_pred CCCCEEEECCCCcccCCch--H---HHHHHHHHhCCCCCeEEEE-ECCCccc------ccccCHHHHHHHHHHHHhcchh
Confidence 3457999999996543321 1 22334443 244444443 2322210 1113455555555554443221
Q ss_pred --CcEEEEeeCccHHHHHHHHHHccC--cccEEEEecCCCC
Q 022316 119 --GAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCK 155 (299)
Q Consensus 119 --~~~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~ 155 (299)
+-++++|+|-||.++=.++.+.|+ .|+.+|.++++..
T Consensus 93 L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 93 LSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred hcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 469999999999999999999887 4999999997653
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00019 Score=52.68 Aligned_cols=124 Identities=13% Similarity=0.158 Sum_probs=72.2
Q ss_pred ceEEEEeccCC------CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCC-----CCCC-CCCCCC
Q 022316 30 GSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE-----FGAA-AISDDE 97 (299)
Q Consensus 30 ~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G-----~S~~-~~~~~~ 97 (299)
..+.+-++=++ .-|+|.++-|+...+........|+. ..-..|+.|+.+|-.-.| +++. +.....
T Consensus 26 c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq---~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQ---QASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred cceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHH---hHhhcCeEEECCCCCCCccccCCCcccccccCCc
Confidence 35555555332 24778888666555433322232321 222458999999954443 1111 111000
Q ss_pred ------------CcccHHH-HHHHHHHHHHh----cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 98 ------------PVLSVDD-LADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 98 ------------~~~~~~~-~~~~l~~~l~~----l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
..|.+-+ ..+.+.+++.. +...++.+.||||||.=|+..+.++|.+-+++-..+|...+
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 1233333 33556666552 23357899999999999999999999998888888776554
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00023 Score=62.18 Aligned_cols=109 Identities=14% Similarity=0.047 Sum_probs=63.8
Q ss_pred CCCeEEEecccccchhhhc----------cccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCF----------QGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~----------~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~ 110 (299)
++-||+|++|-.++...+- .+...+..........|+.+++|+-+-= | .....++.+.++-+.
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~-t------Am~G~~l~dQtEYV~ 160 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEF-T------AMHGHILLDQTEYVN 160 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchh-h------hhccHhHHHHHHHHH
Confidence 4558999999877653321 0111111112223345788888875420 1 112357777777776
Q ss_pred HHHHhc----CC---------CcEEEEeeCccHHHHHHHHHH---ccCcccEEEEecCCCCC
Q 022316 111 EVLNHF----GL---------GAVMCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLCKA 156 (299)
Q Consensus 111 ~~l~~l----~~---------~~~~lvG~S~Gg~va~~~a~~---~p~~v~~lvl~~~~~~~ 156 (299)
+.++.+ .. ..++++||||||.||...+.. .++.|.-++..+++...
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 666542 11 248999999999999876542 34556666666655443
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.58 E-value=7.1e-05 Score=58.18 Aligned_cols=109 Identities=15% Similarity=0.128 Sum_probs=54.6
Q ss_pred CCCeEEEecccccchhhh-ccccccCchhhhcccCceEEEEECCCCCCCC-CCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 41 DKPALVTYPDLALNYMSC-FQGLFFCPEACSLLLHNFCIYHINPPGHEFG-AAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~-~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S-~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
...|||+.||+|.+.... ..... ..+.+..-.|--|.++++ |-+.+ +... .-...+.+.++.+.+.++....
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i--~~~i~~~~PG~yV~si~i-g~~~~~D~~~---s~f~~v~~Qv~~vc~~l~~~p~ 77 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSI--KELIEEQHPGTYVHSIEI-GNDPSEDVEN---SFFGNVNDQVEQVCEQLANDPE 77 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHH--HHHHHHHSTT--EEE--S-SSSHHHHHHH---HHHSHHHHHHHHHHHHHHH-GG
T ss_pred CCCcEEEEEcCccccCChhHHHHH--HHHHHHhCCCceEEEEEE-CCCcchhhhh---hHHHHHHHHHHHHHHHHhhChh
Confidence 445799999999764221 11110 111233345778888887 33211 1000 0113445565666665554321
Q ss_pred --CcEEEEeeCccHHHHHHHHHHccC-cccEEEEecCCCC
Q 022316 119 --GAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCK 155 (299)
Q Consensus 119 --~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~~~ 155 (299)
+-++++|+|-||.++=.++.+.|+ .|+.+|.++++..
T Consensus 78 L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 78 LANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp GTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred hhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 569999999999999999999875 5999999997643
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0011 Score=56.30 Aligned_cols=133 Identities=14% Similarity=0.095 Sum_probs=78.3
Q ss_pred ceeecC---CceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhh------------cccCceEEEEECC
Q 022316 23 NLIKTS---HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACS------------LLLHNFCIYHINP 83 (299)
Q Consensus 23 ~~i~~~---~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~------------~l~~~~~vi~~D~ 83 (299)
-+++++ +..+.|..+.. .+.|.||.+.|.++++.....-....|.... -..+...++.+|.
T Consensus 14 Gyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~ 93 (415)
T PF00450_consen 14 GYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQ 93 (415)
T ss_dssp EEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--
T ss_pred EEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEee
Confidence 355555 45787776543 4678999999887665442111111222111 1123367999995
Q ss_pred C-CCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc-------CCCcEEEEeeCccHHHHHHHHHH----c------cCccc
Q 022316 84 P-GHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-------GLGAVMCMGVTAGAYILTLFAMK----Y------RHRVL 145 (299)
Q Consensus 84 ~-G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l-------~~~~~~lvG~S~Gg~va~~~a~~----~------p~~v~ 145 (299)
| |.|.|....+.. ...+.++.++++..+|... ...+++|.|.|+||..+..+|.+ . +-.++
T Consensus 94 PvGtGfS~~~~~~~-~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLk 172 (415)
T PF00450_consen 94 PVGTGFSYGNDPSD-YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLK 172 (415)
T ss_dssp STTSTT-EESSGGG-GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEE
T ss_pred cCceEEeecccccc-ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccc
Confidence 5 999987543321 2347788888888777543 44589999999999987766652 2 23488
Q ss_pred EEEEecCCCCC
Q 022316 146 GLILVSPLCKA 156 (299)
Q Consensus 146 ~lvl~~~~~~~ 156 (299)
++++.++....
T Consensus 173 Gi~IGng~~dp 183 (415)
T PF00450_consen 173 GIAIGNGWIDP 183 (415)
T ss_dssp EEEEESE-SBH
T ss_pred cceecCccccc
Confidence 99998887654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0004 Score=57.90 Aligned_cols=113 Identities=15% Similarity=0.073 Sum_probs=70.0
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCc-eEEEEECCCC--CC---CCCCC-CCCCCCcccHHHHHH---HH
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-FCIYHINPPG--HE---FGAAA-ISDDEPVLSVDDLAD---QI 109 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~-~~vi~~D~~G--~G---~S~~~-~~~~~~~~~~~~~~~---~l 109 (299)
.+.|++|++||.+....+++...+ .. ..+..+| +-|+++++|= .| .|.-. ........-+.|+.. .+
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~y--dg-s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV 168 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLY--DG-SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWV 168 (491)
T ss_pred CCCcEEEEEeccccccCCCccccc--Ch-HHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHH
Confidence 356999999999877666555442 22 2444555 8888888652 12 11110 001111244556554 44
Q ss_pred HHHHHhcCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCC
Q 022316 110 AEVLNHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (299)
Q Consensus 110 ~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~ 155 (299)
.+-|++.|. ++|.|+|+|.||+.++.+.+. ....+.++|+.++...
T Consensus 169 ~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 169 RDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 555677776 579999999999988876553 2235888888888775
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00027 Score=49.93 Aligned_cols=39 Identities=18% Similarity=0.327 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc
Q 022316 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
.+.+.+.+..+++..+..++++.|||+||.+|..++...
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 345556677777776667899999999999999888754
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00096 Score=57.17 Aligned_cols=110 Identities=16% Similarity=0.072 Sum_probs=73.7
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC----CCcccHHHHHHHHHHHHHh-
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD----EPVLSVDDLADQIAEVLNH- 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~----~~~~~~~~~~~~l~~~l~~- 115 (299)
..|.+|..+|.-.-... ..|...-.-++..|+-....|.||=|+-....... ...-+++|+..-...+++.
T Consensus 469 ~~P~LLygYGay~isl~----p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~g 544 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLD----PSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENG 544 (712)
T ss_pred CCceEEEEecccceeec----cccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcC
Confidence 56766655554322222 22444434556679999999999988544322211 1245777877777766654
Q ss_pred -cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 116 -FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 116 -l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
....+..+.|.|-||.++.....++|+++.++|+--|..
T Consensus 545 yt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 545 YTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred CCCccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 233689999999999999999999999998888766544
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0019 Score=49.40 Aligned_cols=99 Identities=11% Similarity=0.109 Sum_probs=65.8
Q ss_pred CeEEEecccccchhhhccccccCchhhhccc--CceEEEEECCCCCC--CCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGHE--FGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~--~~~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
-|+|++||++....+...+ .+.+++. .|..|++.|. |-| +| -...+.+.++.+.+.+.....
T Consensus 24 ~P~ii~HGigd~c~~~~~~-----~~~q~l~~~~g~~v~~lei-g~g~~~s--------~l~pl~~Qv~~~ce~v~~m~~ 89 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMA-----NLTQLLEELPGSPVYCLEI-GDGIKDS--------SLMPLWEQVDVACEKVKQMPE 89 (296)
T ss_pred CCEEEEeccCcccccchHH-----HHHHHHHhCCCCeeEEEEe-cCCcchh--------hhccHHHHHHHHHHHHhcchh
Confidence 4699999999887552222 2233333 4888999986 555 22 124455555555555543322
Q ss_pred --CcEEEEeeCccHHHHHHHHHHccC-cccEEEEecCCCC
Q 022316 119 --GAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCK 155 (299)
Q Consensus 119 --~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~~~ 155 (299)
+-++++|.|-||.++-.++..-++ .|+.+|.++++..
T Consensus 90 lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 90 LSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred ccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 569999999999999988876654 4899999887643
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00093 Score=53.65 Aligned_cols=58 Identities=14% Similarity=0.163 Sum_probs=43.9
Q ss_pred ccHHHHH-HHHHHHHH-hcCC----CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 100 LSVDDLA-DQIAEVLN-HFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 100 ~~~~~~~-~~l~~~l~-~l~~----~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
+.++++. +++-+.++ +... ++-.++||||||.=|+.+|.++|++++.+..+++.....
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 5565543 45664444 3332 278999999999999999999999999999988876554
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0045 Score=53.54 Aligned_cols=90 Identities=16% Similarity=0.106 Sum_probs=65.4
Q ss_pred hhhhcccCceEEEEECCCCCCCCCCCCC----CCCCcccHHHHHHHHHHHHHhc--CCCcEEEEeeCccHHHHHHHHHHc
Q 022316 67 EACSLLLHNFCIYHINPPGHEFGAAAIS----DDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 67 ~~~~~l~~~~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
....++.+|+-.-..-.||=|.=....- ......|+.|+.+....+++.- ..++++++|-|.||+++-..+...
T Consensus 469 ~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~ 548 (682)
T COG1770 469 ARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMA 548 (682)
T ss_pred ceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhC
Confidence 3356777888776677788663322111 1123468899988888877652 226899999999999999999999
Q ss_pred cCcccEEEEecCCCCC
Q 022316 141 RHRVLGLILVSPLCKA 156 (299)
Q Consensus 141 p~~v~~lvl~~~~~~~ 156 (299)
|++++++|+--|....
T Consensus 549 P~lf~~iiA~VPFVDv 564 (682)
T COG1770 549 PDLFAGIIAQVPFVDV 564 (682)
T ss_pred hhhhhheeecCCccch
Confidence 9999999988876644
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00049 Score=55.79 Aligned_cols=79 Identities=20% Similarity=0.227 Sum_probs=53.8
Q ss_pred ceEEEEECCCCCCCCCCCCC------CCCCcccHHHHHHHHHHHHHhc----CC--CcEEEEeeCccHHHHHHHHHHccC
Q 022316 75 NFCIYHINPPGHEFGAAAIS------DDEPVLSVDDLADQIAEVLNHF----GL--GAVMCMGVTAGAYILTLFAMKYRH 142 (299)
Q Consensus 75 ~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~l~~~l~~l----~~--~~~~lvG~S~Gg~va~~~a~~~p~ 142 (299)
+--++..++|-+|+|.+--. ..-+..+.++-.+|...++..+ +. .+++.+|-|+||++|..+=.+||+
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 56789999999999864111 1112234444444444444443 32 579999999999999999999999
Q ss_pred cccEEEEecCC
Q 022316 143 RVLGLILVSPL 153 (299)
Q Consensus 143 ~v~~lvl~~~~ 153 (299)
.|.|....+.+
T Consensus 191 iv~GAlAaSAP 201 (492)
T KOG2183|consen 191 IVLGALAASAP 201 (492)
T ss_pred hhhhhhhccCc
Confidence 98886655543
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0043 Score=50.07 Aligned_cols=44 Identities=14% Similarity=0.123 Sum_probs=35.4
Q ss_pred HHhcCCCcEEEEeeCccHHHHHHHHHHccC-cccEEEEecCCCCC
Q 022316 113 LNHFGLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKA 156 (299)
Q Consensus 113 l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~ 156 (299)
+...+..+++|+||+.|+..+..+....+. .++++|+|++....
T Consensus 187 ~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~ 231 (310)
T PF12048_consen 187 AQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQ 231 (310)
T ss_pred HHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCc
Confidence 344455669999999999999999988764 48999999985543
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0012 Score=56.31 Aligned_cols=131 Identities=11% Similarity=0.041 Sum_probs=83.5
Q ss_pred CCCCCcceeec-CCceEEEEeccC---C-CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCC
Q 022316 17 PPSGKDNLIKT-SHGSLSVTIYGD---Q-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 17 ~~~~~~~~i~~-~~~~l~~~~~g~---~-~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~ 91 (299)
.+..++++.+. +|.+|+|-+.+. . +.|++|.- .|+=..+-.. . +.+.+...|.+|...+..++||=|+=.+
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~a--YGGF~vsltP-~-fs~~~~~WLerGg~~v~ANIRGGGEfGp 466 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYA--YGGFNISLTP-R-FSGSRKLWLERGGVFVLANIRGGGEFGP 466 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEe--ccccccccCC-c-cchhhHHHHhcCCeEEEEecccCCccCH
Confidence 34445556555 455898887751 2 35666644 3321111111 1 2244456678899999999999875433
Q ss_pred CCC----CCCCcccHHHHHHHHHHHHHhcCC---CcEEEEeeCccHHHHHHHHHHccCcccEEEEecC
Q 022316 92 AIS----DDEPVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP 152 (299)
Q Consensus 92 ~~~----~~~~~~~~~~~~~~l~~~l~~l~~---~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~ 152 (299)
... .....-.++|+++-..+++++ ++ +++.+.|-|=||.+.-....++|+.+.++|+--|
T Consensus 467 ~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 467 EWHQAGMKENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred HHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 111 112235677777777776655 44 5789999999999998888899999888776555
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0016 Score=57.18 Aligned_cols=111 Identities=17% Similarity=0.030 Sum_probs=63.6
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCC----CCCCCCCCCCCCCcccHHHHHHHHHHHHH---
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG----HEFGAAAISDDEPVLSVDDLADQIAEVLN--- 114 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G----~G~S~~~~~~~~~~~~~~~~~~~l~~~l~--- 114 (299)
-|++|++||.+....+.....+ ........++.-|+++++|= +-.+.... ...+.+-+.|+...|.-+-+
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~-~~~gN~Gl~Dq~~AL~WV~~nI~ 201 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFGFLSLGDLD-APSGNYGLLDQRLALKWVQDNIA 201 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHHH-BSSSTT-SHBSTHHHHHHHHHHHHHHHHGG
T ss_pred cceEEEeecccccCCCcccccc--cccccccCCCEEEEEecccccccccccccccc-cCchhhhhhhhHHHHHHHHhhhh
Confidence 4899999998776544322222 22122335688999999772 22121110 00145677787766655544
Q ss_pred hcCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCC
Q 022316 115 HFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (299)
Q Consensus 115 ~l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~ 155 (299)
..|. ++|+|+|||.||..+..++.. ....+.++|+.++...
T Consensus 202 ~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 202 AFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 4454 589999999999987766554 2357999999998543
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.002 Score=49.24 Aligned_cols=50 Identities=10% Similarity=0.183 Sum_probs=36.9
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc----cCcccEEEEecCCCCCc
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKAP 157 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~----p~~v~~lvl~~~~~~~~ 157 (299)
+-+..+++..+ +++.+.|||.||.+|...|... .++|.++...+++....
T Consensus 73 ~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 73 AYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred HHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 33444555544 4699999999999999888873 35788999888866543
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0018 Score=50.09 Aligned_cols=29 Identities=17% Similarity=0.355 Sum_probs=22.3
Q ss_pred HHHhcCCCcEEEEeeCccHHHHHHHHHHc
Q 022316 112 VLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 112 ~l~~l~~~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
.++.....++.+.|||+||.+|..++...
T Consensus 121 ~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 121 ALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 33343456899999999999999887753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.021 Score=44.49 Aligned_cols=104 Identities=15% Similarity=0.183 Sum_probs=70.2
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcE
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 121 (299)
.|.++++-.+.+|...-. +...+.+-....|+.-|+----. .|-..+.+.++|+.+-+.+.+..+|.+ +
T Consensus 103 dPkvLivapmsGH~aTLL------R~TV~alLp~~~vyitDW~dAr~----Vp~~~G~FdldDYIdyvie~~~~~Gp~-~ 171 (415)
T COG4553 103 DPKVLIVAPMSGHYATLL------RGTVEALLPYHDVYITDWVDARM----VPLEAGHFDLDDYIDYVIEMINFLGPD-A 171 (415)
T ss_pred CCeEEEEecccccHHHHH------HHHHHHhccccceeEeeccccce----eecccCCccHHHHHHHHHHHHHHhCCC-C
Confidence 456777755555554421 22245566678899999865421 123345689999999999999999954 8
Q ss_pred EEEeeCccHH-----HHHHHHHHccCcccEEEEecCCCCC
Q 022316 122 MCMGVTAGAY-----ILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 122 ~lvG~S~Gg~-----va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
++++.+-=+. +++.-+...|..-..+++++++...
T Consensus 172 hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 172 HVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred cEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 8888886554 3444444567678899999987754
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.002 Score=49.61 Aligned_cols=48 Identities=15% Similarity=0.255 Sum_probs=38.0
Q ss_pred HHHHHHHHh-c--CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 107 DQIAEVLNH-F--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 107 ~~l~~~l~~-l--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
+.+.-++++ + +-++-.++|||+||.+++.....+|+.+....+++|+.
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 344444444 2 33678999999999999999999999999999999844
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.075 Score=41.38 Aligned_cols=78 Identities=18% Similarity=0.180 Sum_probs=46.7
Q ss_pred cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCC---cEEEEeeCccHHHHHHHHHH---------c
Q 022316 73 LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG---AVMCMGVTAGAYILTLFAMK---------Y 140 (299)
Q Consensus 73 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~---~~~lvG~S~Gg~va~~~a~~---------~ 140 (299)
..|++++.+-.+-..... + ...+...++.+.+.+...... ++.+=..|.||...+..... .
T Consensus 25 ~~g~~il~~~~~~~~~~~---~----~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~ 97 (240)
T PF05705_consen 25 DPGFDILLVTSPPADFFW---P----SKRLAPAADKLLELLSDSQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGK 97 (240)
T ss_pred hcCCeEEEEeCCHHHHee---e----ccchHHHHHHHHHHhhhhccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccc
Confidence 478898887765442111 1 134556666666666554433 79999999988877654331 1
Q ss_pred -cCcccEEEEecCCCCCc
Q 022316 141 -RHRVLGLILVSPLCKAP 157 (299)
Q Consensus 141 -p~~v~~lvl~~~~~~~~ 157 (299)
-.+++++|+-+++....
T Consensus 98 ~~~~i~g~I~DS~P~~~~ 115 (240)
T PF05705_consen 98 LLPRIKGIIFDSCPGIPT 115 (240)
T ss_pred cccccceeEEeCCCCccc
Confidence 12378888666654443
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.013 Score=44.94 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=52.8
Q ss_pred hhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH--------HHH------HhcCCCcEEEEeeCccHHHHH
Q 022316 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA--------EVL------NHFGLGAVMCMGVTAGAYILT 134 (299)
Q Consensus 69 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~--------~~l------~~l~~~~~~lvG~S~Gg~va~ 134 (299)
.+.+.++...+.++-|-+|+..++. .....-+.+.|+. +.. +..|..++.++|-||||-+|.
T Consensus 135 ~p~~k~~i~tmvle~pfYgqr~p~~----q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~ 210 (371)
T KOG1551|consen 135 KPINKREIATMVLEKPFYGQRVPEE----QIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIAN 210 (371)
T ss_pred CchhhhcchheeeecccccccCCHH----HHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHH
Confidence 4556678888999999998764321 1122222233331 211 234668999999999999999
Q ss_pred HHHHHccCcccEEEEecCC
Q 022316 135 LFAMKYRHRVLGLILVSPL 153 (299)
Q Consensus 135 ~~a~~~p~~v~~lvl~~~~ 153 (299)
.....++..|+-+=++++.
T Consensus 211 ~vgS~~q~Pva~~p~l~~~ 229 (371)
T KOG1551|consen 211 QVGSLHQKPVATAPCLNSS 229 (371)
T ss_pred hhcccCCCCcccccccccc
Confidence 9998887766655555543
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.003 Score=52.76 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHH
Q 022316 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~ 138 (299)
..++.+.+.++++.....++++.|||+||++|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 4455566677777766678999999999999988765
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0018 Score=55.66 Aligned_cols=49 Identities=10% Similarity=0.089 Sum_probs=34.5
Q ss_pred HHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHcc---------------CcccEEEEecCCCCC
Q 022316 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR---------------HRVLGLILVSPLCKA 156 (299)
Q Consensus 108 ~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p---------------~~v~~lvl~~~~~~~ 156 (299)
-|+...+.-+-++++|+||||||.+++.+..... +.|++.|.++++...
T Consensus 202 lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 202 NIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 3333333344589999999999999999876321 248899999886543
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0075 Score=50.48 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=64.4
Q ss_pred ceEEEEECCCCCCCCCCCCC---CCCCcccHHHHHHHHHHHHHhcCC-------CcEEEEeeCccHHHHHHHHHHccCcc
Q 022316 75 NFCIYHINPPGHEFGAAAIS---DDEPVLSVDDLADQIAEVLNHFGL-------GAVMCMGVTAGAYILTLFAMKYRHRV 144 (299)
Q Consensus 75 ~~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~~~~l~~~l~~l~~-------~~~~lvG~S~Gg~va~~~a~~~p~~v 144 (299)
|-.|+..++|-+|.|.+... +.-...+.++..+|+..+|++++. .+.+.+|-|+-|.++.-+=.++|+.+
T Consensus 118 gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~ 197 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELT 197 (514)
T ss_pred CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhh
Confidence 88999999999998853211 112345677788889988887753 27899999999999999999999999
Q ss_pred cEEEEecCCCCC
Q 022316 145 LGLILVSPLCKA 156 (299)
Q Consensus 145 ~~lvl~~~~~~~ 156 (299)
.+-|.-+++...
T Consensus 198 ~GsvASSapv~A 209 (514)
T KOG2182|consen 198 VGSVASSAPVLA 209 (514)
T ss_pred eeecccccceeE
Confidence 998877766543
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.03 Score=44.79 Aligned_cols=66 Identities=24% Similarity=0.173 Sum_probs=47.2
Q ss_pred Chhhhhcccc-ccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHh-------HHHHHHHHhhhhc
Q 022316 233 DISEGLRKLQ-CRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLL-------GFLVLLASFCESE 298 (299)
Q Consensus 233 ~~~~~~~~i~-~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-------~f~~~~~~~~~~~ 298 (299)
+....+.++. +|+|+++|.+|.++ .....+.......+.....+++++|.... +.+..+..|+++.
T Consensus 222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 4444555666 79999999999998 55666666554435788889999997763 4566677777654
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0058 Score=50.55 Aligned_cols=35 Identities=29% Similarity=0.403 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhcCCCc--EEEEeeCccHHHHHHHHHH
Q 022316 105 LADQIAEVLNHFGLGA--VMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 105 ~~~~l~~~l~~l~~~~--~~lvG~S~Gg~va~~~a~~ 139 (299)
+...|..+++.....+ +++.|||+||++|...|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344555555554444 9999999999999988864
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0058 Score=51.22 Aligned_cols=52 Identities=13% Similarity=0.207 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc--------cCcccEEEEecCCC
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLC 154 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~--------p~~v~~lvl~~~~~ 154 (299)
.++.+.+..+++.....++++.|||+||++|...|... ..++.++...+++-
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 35666777788877777899999999999999887521 22345566665533
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0059 Score=40.45 Aligned_cols=54 Identities=17% Similarity=0.037 Sum_probs=42.8
Q ss_pred ccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHh----HHHHHHHHhhh
Q 022316 241 LQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLL----GFLVLLASFCE 296 (299)
Q Consensus 241 i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~----~f~~~~~~~~~ 296 (299)
-..|+|+|.++.|+++ +.++.+.+.+++ ..+++.++.||-.+. ---+.+.+|+.
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~--s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPG--SRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCC--ceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 3589999999999998 889999999976 889999999998873 12344455553
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0073 Score=50.03 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhcCCC--cEEEEeeCccHHHHHHHHHH
Q 022316 103 DDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~--~~~lvG~S~Gg~va~~~a~~ 139 (299)
+++.++|..+++...-+ ++++.|||+||++|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45667777777766543 68999999999999988764
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0023 Score=53.08 Aligned_cols=56 Identities=11% Similarity=0.107 Sum_probs=43.7
Q ss_pred cccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC--------cccEEEEecCCC
Q 022316 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH--------RVLGLILVSPLC 154 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~--------~v~~lvl~~~~~ 154 (299)
...+..+..-|+...+..|.+|++||+|||||.+.+.+...+++ .|++.+-++++.
T Consensus 162 d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 162 DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 35666777777777777777999999999999999999988876 366777666544
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.01 Score=43.42 Aligned_cols=55 Identities=20% Similarity=0.193 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhcC-----CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 102 VDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~-----~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
-++-+.+|..+++.+. -.++.++|||+|+.++-..+...+..+..+|+++++...
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 3445556666665543 247899999999999988877767789999999986644
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0059 Score=36.08 Aligned_cols=42 Identities=17% Similarity=0.183 Sum_probs=20.9
Q ss_pred CCCCCCcceeecCCc-eEEEE-eccC-------CCCCeEEEecccccchhh
Q 022316 16 PPPSGKDNLIKTSHG-SLSVT-IYGD-------QDKPALVTYPDLALNYMS 57 (299)
Q Consensus 16 ~~~~~~~~~i~~~~~-~l~~~-~~g~-------~~~p~lvl~HG~~~~~~~ 57 (299)
..++.+++.+.+++| -|... ...+ ..+|||+|.||+..++..
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 346788999999888 33333 2222 257899999999998855
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.012 Score=43.40 Aligned_cols=80 Identities=14% Similarity=0.129 Sum_probs=46.6
Q ss_pred ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH------ccCcccEEE
Q 022316 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK------YRHRVLGLI 148 (299)
Q Consensus 75 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~------~p~~v~~lv 148 (299)
...+..+++|-..... ........-..++.+.|........-.+++|+|+|.|+.++..++.. ..++|.+++
T Consensus 39 ~~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avv 116 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVV 116 (179)
T ss_dssp EEEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEE
T ss_pred eeEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEE
Confidence 4666667777643210 00000011234445555555566666799999999999999998876 346799999
Q ss_pred EecCCCCC
Q 022316 149 LVSPLCKA 156 (299)
Q Consensus 149 l~~~~~~~ 156 (299)
+++-+...
T Consensus 117 lfGdP~~~ 124 (179)
T PF01083_consen 117 LFGDPRRG 124 (179)
T ss_dssp EES-TTTB
T ss_pred EecCCccc
Confidence 99866553
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0086 Score=48.86 Aligned_cols=36 Identities=28% Similarity=0.425 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCC--cEEEEeeCccHHHHHHHHHHc
Q 022316 105 LADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 105 ~~~~l~~~l~~l~~~--~~~lvG~S~Gg~va~~~a~~~ 140 (299)
+.+.|..+++..+.+ ++++.|||+||++|...|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 445666677666543 589999999999999887643
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.028 Score=45.69 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=32.0
Q ss_pred cCCCcEEEEeeCccHHHHHHHHHHccC-----cccEEEEecCCCCCc
Q 022316 116 FGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKAP 157 (299)
Q Consensus 116 l~~~~~~lvG~S~Gg~va~~~a~~~p~-----~v~~lvl~~~~~~~~ 157 (299)
.+.++++|||||+|+.+.+.......+ .|+.+++++.+....
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 355789999999999998876654433 389999998766553
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.08 Score=45.01 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=72.4
Q ss_pred ceeecC---CceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhh----------------hcccCceEEE
Q 022316 23 NLIKTS---HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEAC----------------SLLLHNFCIY 79 (299)
Q Consensus 23 ~~i~~~---~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~----------------~~l~~~~~vi 79 (299)
-+++++ +..+.|.-... .+.|.|+.+-|.++++.....-.--.|... ....+-..++
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 345553 23566654432 357889999888665533210000011100 0112236699
Q ss_pred EEC-CCCCCCCCCCCCCCCCcccHHHHHHHHHHHHH----hcC---CCcEEEEeeCccHHHHHHHHHHc----------c
Q 022316 80 HIN-PPGHEFGAAAISDDEPVLSVDDLADQIAEVLN----HFG---LGAVMCMGVTAGAYILTLFAMKY----------R 141 (299)
Q Consensus 80 ~~D-~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~----~l~---~~~~~lvG~S~Gg~va~~~a~~~----------p 141 (299)
-+| ..|.|.|....+.. ..+-++.++++..++. ... ..+++|.|.|+||..+..+|..- +
T Consensus 122 fiDqPvGtGfSy~~~~~~--~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIE--RTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EecCCCCCCccCCCCCCC--ccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 999 77889886432211 1222233455555443 332 35899999999999777766531 1
Q ss_pred CcccEEEEecCCCCC
Q 022316 142 HRVLGLILVSPLCKA 156 (299)
Q Consensus 142 ~~v~~lvl~~~~~~~ 156 (299)
=.++++++.++....
T Consensus 200 inl~Gi~igng~td~ 214 (437)
T PLN02209 200 INLQGYVLGNPITHI 214 (437)
T ss_pred eeeeeEEecCcccCh
Confidence 146888888876543
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.021 Score=47.25 Aligned_cols=37 Identities=14% Similarity=0.288 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhcC---C-CcEEEEeeCccHHHHHHHHHH
Q 022316 103 DDLADQIAEVLNHFG---L-GAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~---~-~~~~lvG~S~Gg~va~~~a~~ 139 (299)
+++.+.|..+++.+. . -++++.|||+||++|...|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344556666666553 1 368999999999999887753
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.013 Score=49.53 Aligned_cols=37 Identities=14% Similarity=0.246 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHH
Q 022316 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~ 138 (299)
..++.+.+..+++.....++++.|||+||++|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3456667777787777779999999999999998874
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.029 Score=42.92 Aligned_cols=35 Identities=23% Similarity=0.220 Sum_probs=27.4
Q ss_pred cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
+++-+|||+|+-+-+.+...++..-++-++++-..
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 57789999999999988887765557777777543
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.018 Score=47.76 Aligned_cols=35 Identities=17% Similarity=0.287 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhcCCC--cEEEEeeCccHHHHHHHHHH
Q 022316 105 LADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 105 ~~~~l~~~l~~l~~~--~~~lvG~S~Gg~va~~~a~~ 139 (299)
+.+.|..+++...-+ ++++.|||+||++|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 445566677766542 68999999999999988753
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.15 Score=43.42 Aligned_cols=135 Identities=12% Similarity=0.067 Sum_probs=73.8
Q ss_pred cceeecC---CceEEEEeccC----CCCCeEEEecccccchhhhccccccCchh----------------hhcccCceEE
Q 022316 22 DNLIKTS---HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEA----------------CSLLLHNFCI 78 (299)
Q Consensus 22 ~~~i~~~---~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~----------------~~~l~~~~~v 78 (299)
.-+++++ +..+.|.-... .+.|.|+.+-|.++++.....-..-.|.- ..-..+...+
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 118 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANI 118 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcE
Confidence 3455553 24566665432 35688999988866554211000000110 0111233679
Q ss_pred EEEC-CCCCCCCCCCCCCCCC--cccHHHHHHHHHHHHHhc---CCCcEEEEeeCccHHHHHHHHHH----c------cC
Q 022316 79 YHIN-PPGHEFGAAAISDDEP--VLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMK----Y------RH 142 (299)
Q Consensus 79 i~~D-~~G~G~S~~~~~~~~~--~~~~~~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~va~~~a~~----~------p~ 142 (299)
+-+| ..|.|.|....+.... ..+.+++.+.+..+++.. ...+++|.|.|+||..+..+|.. . +-
T Consensus 119 lfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~i 198 (433)
T PLN03016 119 IFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPI 198 (433)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcc
Confidence 9999 7789988643321111 011233444444444433 23689999999999977776653 1 12
Q ss_pred cccEEEEecCCCCC
Q 022316 143 RVLGLILVSPLCKA 156 (299)
Q Consensus 143 ~v~~lvl~~~~~~~ 156 (299)
.++|+++-++....
T Consensus 199 nLkGi~iGNg~t~~ 212 (433)
T PLN03016 199 NLQGYMLGNPVTYM 212 (433)
T ss_pred cceeeEecCCCcCc
Confidence 57888888875533
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.022 Score=48.34 Aligned_cols=36 Identities=14% Similarity=0.295 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCC--cEEEEeeCccHHHHHHHHHH
Q 022316 104 DLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 104 ~~~~~l~~~l~~l~~~--~~~lvG~S~Gg~va~~~a~~ 139 (299)
++.+.|..+++....+ ++++.|||+||++|...|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 3445566666665432 68999999999999987764
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.066 Score=45.28 Aligned_cols=112 Identities=15% Similarity=0.115 Sum_probs=64.5
Q ss_pred CCCeEEEecccccchhhhccccccCchh------------hhcccCceEEEEEC-CCCCCCCCCCCCCCCCcccHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEA------------CSLLLHNFCIYHIN-PPGHEFGAAAISDDEPVLSVDDLAD 107 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~------------~~~l~~~~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (299)
++|.|+.+.|.++++.....-.-..|.- ..-....-.++-+| .-|.|.|.... .....++....+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~--~e~~~d~~~~~~ 177 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALG--DEKKKDFEGAGK 177 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccc--cccccchhccch
Confidence 5789999988877654321100000100 00111224689999 67899887521 122345555555
Q ss_pred HHHHHHHh-------cCC--CcEEEEeeCccHHHHHHHHHHccC---cccEEEEecCCC
Q 022316 108 QIAEVLNH-------FGL--GAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLC 154 (299)
Q Consensus 108 ~l~~~l~~-------l~~--~~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~ 154 (299)
|+..+++. ..- .+.+|+|-|+||.-+..+|..--+ ..++++++.+..
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 55554432 222 589999999999999888875443 255666665443
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.04 Score=41.27 Aligned_cols=41 Identities=15% Similarity=0.193 Sum_probs=33.1
Q ss_pred ccHHHHHHHHHHHHHhcCC-CcEEEEeeCccHHHHHHHHHHc
Q 022316 100 LSVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~-~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
....|..+.....|++.+. ++++|+|||-|+.+..++..++
T Consensus 75 ~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 4456667777777888765 5899999999999999998765
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.024 Score=48.25 Aligned_cols=35 Identities=14% Similarity=0.264 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhcCC-----CcEEEEeeCccHHHHHHHHH
Q 022316 104 DLADQIAEVLNHFGL-----GAVMCMGVTAGAYILTLFAM 138 (299)
Q Consensus 104 ~~~~~l~~~l~~l~~-----~~~~lvG~S~Gg~va~~~a~ 138 (299)
++.+.|..+++..+. -++++.|||+||++|...|.
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 344556666666542 47999999999999998875
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.062 Score=50.21 Aligned_cols=97 Identities=18% Similarity=0.162 Sum_probs=63.9
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCC-CCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE-FGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G-~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
...|++.|+|.+-+.... .+.+.+.. ..|.+| .+.... +..++++.++-...-++.+..
T Consensus 2121 se~~~~Ffv~pIEG~tt~-----------l~~la~rl-----e~PaYglQ~T~~v----P~dSies~A~~yirqirkvQP 2180 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTA-----------LESLASRL-----EIPAYGLQCTEAV----PLDSIESLAAYYIRQIRKVQP 2180 (2376)
T ss_pred ccCCceEEEeccccchHH-----------HHHHHhhc-----CCcchhhhccccC----CcchHHHHHHHHHHHHHhcCC
Confidence 467889999766443311 12223322 345666 333233 357899988876666666654
Q ss_pred -CcEEEEeeCccHHHHHHHHHHcc--CcccEEEEecCCCCC
Q 022316 119 -GAVMCMGVTAGAYILTLFAMKYR--HRVLGLILVSPLCKA 156 (299)
Q Consensus 119 -~~~~lvG~S~Gg~va~~~a~~~p--~~v~~lvl~~~~~~~ 156 (299)
.+..++|.|+|+.++.++|.... +....+++++..+..
T Consensus 2181 ~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2181 EGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred CCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 78999999999999999987543 335668999876643
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.13 Score=41.88 Aligned_cols=80 Identities=15% Similarity=0.241 Sum_probs=48.6
Q ss_pred EEEEECCC-CCCCCCCCCCCCCC--cccHHHHHHHHHHHHHhc---CCCcEEEEeeCccHHHHHHHHHHc----------
Q 022316 77 CIYHINPP-GHEFGAAAISDDEP--VLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKY---------- 140 (299)
Q Consensus 77 ~vi~~D~~-G~G~S~~~~~~~~~--~~~~~~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~va~~~a~~~---------- 140 (299)
.++-+|.| |.|.|....+.... ....+++...|..+++.. ...+++|.|-|.||..+-.+|..-
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 58889988 88888643321111 011133333344444333 336899999999999887777632
Q ss_pred cCcccEEEEecCCCCC
Q 022316 141 RHRVLGLILVSPLCKA 156 (299)
Q Consensus 141 p~~v~~lvl~~~~~~~ 156 (299)
+=.++|+++-++....
T Consensus 83 ~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 83 PINLQGYMLGNPVTYM 98 (319)
T ss_pred ceeeeEEEeCCCCCCc
Confidence 1147888888875543
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.12 Score=45.63 Aligned_cols=111 Identities=22% Similarity=0.163 Sum_probs=61.8
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHHHH---HH
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEV---LN 114 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~~~---l~ 114 (299)
-|++|++||.+....+....... ........++.-|+++.+| |+....... . .+.+-+.|+...+.-+ |.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~-~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~-~-~gN~gl~Dq~~AL~wv~~~I~ 188 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEII-SPAYVLLLKDVVVVTINYRLGPLGFLSTGDSA-A-PGNLGLFDQLLALRWVKDNIP 188 (545)
T ss_pred CCEEEEEeCCceeeccccchhhc-CchhccccCCEEEEEecccceeceeeecCCCC-C-CCcccHHHHHHHHHHHHHHHH
Confidence 58999999987654331111101 1111222335666777755 333221111 1 2346667776666544 44
Q ss_pred hcCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCC
Q 022316 115 HFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (299)
Q Consensus 115 ~l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~ 155 (299)
..|. ++++|+|||.||..+..+... ...++.+.|..++...
T Consensus 189 ~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 189 SFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred hcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 4443 689999999999998766542 1245666666665543
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.14 Score=41.55 Aligned_cols=58 Identities=16% Similarity=0.071 Sum_probs=45.2
Q ss_pred ccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHH-HHhhhh
Q 022316 239 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLL-ASFCES 297 (299)
Q Consensus 239 ~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~-~~~~~~ 297 (299)
.++..|-.++.|+.|.+. +.+.-..+.+++. ..+..+|+.-|..+..|.++. ..|+++
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~-kaLrmvPN~~H~~~n~~i~esl~~flnr 386 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGE-KALRMVPNDPHNLINQFIKESLEPFLNR 386 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCc-eeeeeCCCCcchhhHHHHHHHHHHHHHH
Confidence 457789999999988775 5666667888865 778999999999998887664 566654
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.032 Score=47.38 Aligned_cols=36 Identities=14% Similarity=0.307 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhcCC-----CcEEEEeeCccHHHHHHHHHH
Q 022316 104 DLADQIAEVLNHFGL-----GAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 104 ~~~~~l~~~l~~l~~-----~~~~lvG~S~Gg~va~~~a~~ 139 (299)
++.+.|..+++...- -++++.|||+||++|...|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344556666665532 379999999999999987753
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.031 Score=47.54 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhcCC----CcEEEEeeCccHHHHHHHHHH
Q 022316 104 DLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 104 ~~~~~l~~~l~~l~~----~~~~lvG~S~Gg~va~~~a~~ 139 (299)
++.++|..+++.+.. .++++.|||+||++|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345667777766531 369999999999999887753
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.033 Score=47.45 Aligned_cols=35 Identities=14% Similarity=0.288 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcC-----C-CcEEEEeeCccHHHHHHHHH
Q 022316 104 DLADQIAEVLNHFG-----L-GAVMCMGVTAGAYILTLFAM 138 (299)
Q Consensus 104 ~~~~~l~~~l~~l~-----~-~~~~lvG~S~Gg~va~~~a~ 138 (299)
++.+.|..+++..+ . -++++.|||+||++|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 44556666666652 1 36999999999999998775
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.026 Score=44.39 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=32.4
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
+.-+|+|-|+||.+++..+..+|+++-.++..++...
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 3468999999999999999999999999888887553
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.13 Score=42.49 Aligned_cols=105 Identities=14% Similarity=0.131 Sum_probs=74.6
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC-
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL- 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~- 118 (299)
.+.|+|+..-|.+..... .......++ +-+-+.+++|-+|.|.+. |.+-...++++-++|...+.+++..
T Consensus 61 ~drPtV~~T~GY~~~~~p------~r~Ept~Ll--d~NQl~vEhRfF~~SrP~-p~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSP------RRSEPTQLL--DGNQLSVEHRFFGPSRPE-PADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred CCCCeEEEecCcccccCc------cccchhHhh--ccceEEEEEeeccCCCCC-CCCcccccHhHhhHHHHHHHHHHHhh
Confidence 467878877565553211 111212233 346788999999999753 3445568999999999888877642
Q ss_pred --CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCC
Q 022316 119 --GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (299)
Q Consensus 119 --~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 153 (299)
++-+--|-|=||+.++.+=.-+|+.|++.|.--.+
T Consensus 132 Y~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 132 YPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 67888899999999998877899999998765444
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.078 Score=45.97 Aligned_cols=28 Identities=14% Similarity=0.167 Sum_probs=21.3
Q ss_pred HHHhcCCCcEEEEeeCccHHHHHHHHHH
Q 022316 112 VLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 112 ~l~~l~~~~~~lvG~S~Gg~va~~~a~~ 139 (299)
.++....-+++++|||+||.+|..++..
T Consensus 244 al~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 244 ALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3344444589999999999999887764
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.035 Score=39.65 Aligned_cols=43 Identities=23% Similarity=0.341 Sum_probs=34.9
Q ss_pred HHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 112 VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 112 ~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
+++..-..+..+-|-||||.-|..+..++|+...++|.++...
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 3433333567888999999999999999999999999988754
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.085 Score=43.26 Aligned_cols=37 Identities=14% Similarity=0.284 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~ 139 (299)
..+.+++..+++...--++.+-|||+||++|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677888888888887789999999999999887763
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.16 Score=42.09 Aligned_cols=36 Identities=22% Similarity=0.232 Sum_probs=30.9
Q ss_pred cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
|++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 889999999999999999999999988776555443
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.94 Score=38.67 Aligned_cols=135 Identities=13% Similarity=0.047 Sum_probs=75.3
Q ss_pred CcceeecC---CceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhh-----c------ccCceEEEEEC
Q 022316 21 KDNLIKTS---HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACS-----L------LLHNFCIYHIN 82 (299)
Q Consensus 21 ~~~~i~~~---~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~-----~------l~~~~~vi~~D 82 (299)
..-++.++ +..|.|.-... ...|.||.+-|.++.+.....-.-..|.... + -.+--.++-+|
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd 124 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLD 124 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEe
Confidence 34567775 45787775432 3578889998887665332111101111111 0 01124588888
Q ss_pred CC-CCCCCCCCCCCCCCcccHHHHHHHHH----HHHHhc---CCCcEEEEeeCccHHHHHHHHHH----cc------Ccc
Q 022316 83 PP-GHEFGAAAISDDEPVLSVDDLADQIA----EVLNHF---GLGAVMCMGVTAGAYILTLFAMK----YR------HRV 144 (299)
Q Consensus 83 ~~-G~G~S~~~~~~~~~~~~~~~~~~~l~----~~l~~l---~~~~~~lvG~S~Gg~va~~~a~~----~p------~~v 144 (299)
.| |.|.|....+.... .+-+..++|+. .+++.. .-.+++|.|-|++|...-.+|.. +. -.+
T Consensus 125 ~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 125 QPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred cCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 65 78877643332111 23334444544 444443 23689999999999777666652 21 247
Q ss_pred cEEEEecCCCCC
Q 022316 145 LGLILVSPLCKA 156 (299)
Q Consensus 145 ~~lvl~~~~~~~ 156 (299)
+|+++-++....
T Consensus 204 kG~~IGNg~td~ 215 (454)
T KOG1282|consen 204 KGYAIGNGLTDP 215 (454)
T ss_pred eEEEecCcccCc
Confidence 888877776543
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.21 Score=41.15 Aligned_cols=64 Identities=13% Similarity=0.244 Sum_probs=45.4
Q ss_pred hhhcc-cCceEEEEEC-CCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh----cCCCcEEEEeeCccHHHHHHHHHHcc
Q 022316 68 ACSLL-LHNFCIYHIN-PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYR 141 (299)
Q Consensus 68 ~~~~l-~~~~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~----l~~~~~~lvG~S~Gg~va~~~a~~~p 141 (299)
+...| ..|+.|+.+| +|.| .| ..+.++.++|+..+++. .+..++.|+|+|+|+=+.-..-.+.|
T Consensus 279 v~~~l~~~gvpVvGvdsLRYf-W~---------~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 279 VAEALQKQGVPVVGVDSLRYF-WS---------ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHHHCCCceeeeehhhhh-hc---------cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 34444 4599999999 5554 22 24667778888777765 45689999999999988765544444
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.32 Score=42.15 Aligned_cols=63 Identities=16% Similarity=0.349 Sum_probs=38.8
Q ss_pred cHHHHHHHHHHHHHhcCC---CcEEEEeeCccHHHHHHHHHH-----ccC------cccEEEEecCCCCCcchhHHH
Q 022316 101 SVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMK-----YRH------RVLGLILVSPLCKAPSWTEWL 163 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~---~~~~lvG~S~Gg~va~~~a~~-----~p~------~v~~lvl~~~~~~~~~~~~~~ 163 (299)
++..-...+...+.+.++ .+++.+||||||.++=.+... .|+ ...++++++.+........|.
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS~lA~~k 581 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGSRLAGWK 581 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCCcccccc
Confidence 444444445555555444 579999999999988655432 232 357788888776555444443
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.14 Score=34.31 Aligned_cols=35 Identities=3% Similarity=-0.042 Sum_probs=20.0
Q ss_pred ceeecCCceEEEEeccC--CCCCeEEEecccccchhh
Q 022316 23 NLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMS 57 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~--~~~p~lvl~HG~~~~~~~ 57 (299)
...++++..||+..... ++..||||+||++++-..
T Consensus 71 f~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGG
T ss_pred eeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHh
Confidence 44566777888776542 345689999999998643
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.66 Score=40.13 Aligned_cols=87 Identities=14% Similarity=0.179 Sum_probs=57.2
Q ss_pred hhcccCceEEEEECCCCCCCCCC--CCCCCCCccc--------HHHHHHHHHHHHHh-cC--CCcEEEEeeCccHHHHHH
Q 022316 69 CSLLLHNFCIYHINPPGHEFGAA--AISDDEPVLS--------VDDLADQIAEVLNH-FG--LGAVMCMGVTAGAYILTL 135 (299)
Q Consensus 69 ~~~l~~~~~vi~~D~~G~G~S~~--~~~~~~~~~~--------~~~~~~~l~~~l~~-l~--~~~~~lvG~S~Gg~va~~ 135 (299)
...+..||.++.=|- ||..+.. .......... +.+.+..-.++++. .+ .+.-+..|.|-||.-++.
T Consensus 53 ~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 53 ATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred chhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 456788999999996 7764432 1111111112 22222222333433 23 356789999999999999
Q ss_pred HHHHccCcccEEEEecCCCCC
Q 022316 136 FAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 136 ~a~~~p~~v~~lvl~~~~~~~ 156 (299)
.|.++|+..++++.-+|....
T Consensus 132 ~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 132 AAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHhChhhcCeEEeCCchHHH
Confidence 999999999999999987644
|
It also includes several bacterial homologues of unknown function. |
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.15 Score=41.99 Aligned_cols=32 Identities=19% Similarity=0.478 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHH
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILT 134 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~ 134 (299)
..+++++.+.+....++++..+|||+||.++-
T Consensus 134 ~Rla~~~~e~~~~~si~kISfvghSLGGLvar 165 (405)
T KOG4372|consen 134 ERLAEEVKETLYDYSIEKISFVGHSLGGLVAR 165 (405)
T ss_pred cccHHHHhhhhhccccceeeeeeeecCCeeee
Confidence 34455555555555678999999999999864
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=91.67 E-value=2.1 Score=32.90 Aligned_cols=57 Identities=16% Similarity=0.227 Sum_probs=36.6
Q ss_pred ccHHHHHHHHHHHHHhc--CCCcEEEEeeCccHHHHHHHHHHccC------cccEEEEecCCCCC
Q 022316 100 LSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRH------RVLGLILVSPLCKA 156 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~va~~~a~~~p~------~v~~lvl~~~~~~~ 156 (299)
.+..+=++.+.+.++.. .-++++++|+|.|+.++...+.+.-+ .....|+++-+...
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~rp 91 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPRRP 91 (225)
T ss_pred hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCCCC
Confidence 45555556666666541 23789999999999999887765421 23456666654433
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.79 E-value=0.71 Score=36.21 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=24.7
Q ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHcc
Q 022316 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p 141 (299)
..+.+...-.++.|-|||+||++|..+..++.
T Consensus 267 ~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 267 GAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 33444455578999999999999998887764
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=90.79 E-value=0.71 Score=36.21 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=24.7
Q ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHcc
Q 022316 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p 141 (299)
..+.+...-.++.|-|||+||++|..+..++.
T Consensus 267 ~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 267 GAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 33444455578999999999999998887764
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=88.95 E-value=3.6 Score=33.16 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=53.7
Q ss_pred eEEEEEC-CCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc-------CCCcEEEEeeCccHHHHHHHHHHccC-----
Q 022316 76 FCIYHIN-PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-------GLGAVMCMGVTAGAYILTLFAMKYRH----- 142 (299)
Q Consensus 76 ~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l-------~~~~~~lvG~S~Gg~va~~~a~~~p~----- 142 (299)
-.++.+| .-|.|.|.-+-.. .-..+..+.+.|+.++++.+ .-.+++++..|.||-.|..++...-+
T Consensus 72 adllfvDnPVGaGfSyVdg~~-~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G 150 (414)
T KOG1283|consen 72 ADLLFVDNPVGAGFSYVDGSS-AYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG 150 (414)
T ss_pred ccEEEecCCCcCceeeecCcc-cccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC
Confidence 3466666 4478877543221 12346778889999988754 33589999999999999888764322
Q ss_pred ----cccEEEEecCCCCC
Q 022316 143 ----RVLGLILVSPLCKA 156 (299)
Q Consensus 143 ----~v~~lvl~~~~~~~ 156 (299)
.+.+++|=++...+
T Consensus 151 ~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 151 EIKLNFIGVALGDSWISP 168 (414)
T ss_pred ceeecceeEEccCcccCh
Confidence 35667776766554
|
|
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.36 E-value=1.3 Score=37.80 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=32.7
Q ss_pred hcCCCcEEEEeeCccHHHHHHHHHH-----ccCcccEEEEecCCCCCc
Q 022316 115 HFGLGAVMCMGVTAGAYILTLFAMK-----YRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 115 ~l~~~~~~lvG~S~Gg~va~~~a~~-----~p~~v~~lvl~~~~~~~~ 157 (299)
..|.+|+.|||+|+|+-+....... .-..|..+++++.+....
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 4566899999999999998855442 224588999999877664
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=87.77 E-value=2.5 Score=30.19 Aligned_cols=76 Identities=7% Similarity=0.072 Sum_probs=48.5
Q ss_pred eEEEecccccchhhhccccccCchhhh-cccCceE-EEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcE
Q 022316 44 ALVTYPDLALNYMSCFQGLFFCPEACS-LLLHNFC-IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (299)
Q Consensus 44 ~lvl~HG~~~~~~~~~~~~~w~~~~~~-~l~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 121 (299)
.||..-|+|.+... +.. .+.+++. ++++|+...... .++.. .+.+
T Consensus 13 LIvyFaGwgtpps~----------v~HLilpeN~dl~lcYDY~dl~ld----------fDfsA-------------y~hi 59 (214)
T COG2830 13 LIVYFAGWGTPPSA----------VNHLILPENHDLLLCYDYQDLNLD----------FDFSA-------------YRHI 59 (214)
T ss_pred EEEEEecCCCCHHH----------HhhccCCCCCcEEEEeehhhcCcc----------cchhh-------------hhhh
Confidence 67777777766522 112 2345665 568898765211 22222 2557
Q ss_pred EEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
.||++|||-.+|-++....+ +++.+.+++..
T Consensus 60 rlvAwSMGVwvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 60 RLVAWSMGVWVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred hhhhhhHHHHHHHHHHhhcc--ccceeeecCCC
Confidence 78999999999998876654 77778777654
|
|
| >TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit | Back alignment and domain information |
|---|
Probab=87.42 E-value=0.36 Score=38.92 Aligned_cols=31 Identities=16% Similarity=0.101 Sum_probs=24.8
Q ss_pred HHHHHHHhcCCCcEEEEeeCccHHHHHHHHH
Q 022316 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (299)
Q Consensus 108 ~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~ 138 (299)
.+.++++..++++..++|||+|=+.|+.++.
T Consensus 65 al~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 65 AAWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 3455667778899999999999988887664
|
Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group. |
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=85.46 E-value=0.56 Score=34.67 Aligned_cols=48 Identities=10% Similarity=-0.013 Sum_probs=36.9
Q ss_pred hccc-cccEEEEecCCCcch-----hhhHHHhhhccccCceEEEEcCchhhhHh
Q 022316 238 LRKL-QCRSLIFVGESSPFH-----SEAVHMTSKIDRRYSALVEVWTRVYISLL 285 (299)
Q Consensus 238 ~~~i-~~P~lii~G~~D~~~-----~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 285 (299)
.+.| +++.|-|-|+.|.+. ..+..+...++......+..|++||.-+.
T Consensus 129 p~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF 182 (202)
T PF06850_consen 129 PAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLF 182 (202)
T ss_pred hHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecc
Confidence 3455 467888999999996 45666667777777888999999997653
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases | Back alignment and domain information |
|---|
Probab=80.04 E-value=8 Score=29.23 Aligned_cols=65 Identities=9% Similarity=0.044 Sum_probs=48.6
Q ss_pred Cce-EEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCc----cHHHHHHHHHHcc-CcccEE
Q 022316 74 HNF-CIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTA----GAYILTLFAMKYR-HRVLGL 147 (299)
Q Consensus 74 ~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~----Gg~va~~~a~~~p-~~v~~l 147 (299)
.|. +|+..|.++. ..++.+.+++.+.++++..+ -.++|+|+|. |..++.++|.+.. ..+..+
T Consensus 75 ~G~d~V~~~~~~~~-----------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv 142 (202)
T cd01714 75 MGADRAILVSDRAF-----------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYV 142 (202)
T ss_pred cCCCEEEEEecccc-----------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceE
Confidence 454 7888877654 23778999999999998877 6799999998 8899999988753 245555
Q ss_pred EEe
Q 022316 148 ILV 150 (299)
Q Consensus 148 vl~ 150 (299)
+-+
T Consensus 143 ~~l 145 (202)
T cd01714 143 SKI 145 (202)
T ss_pred EEE
Confidence 544
|
ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 299 | ||||
| 2xmq_A | 281 | Crystal Structure Of Human Ndrg2 Protein Provides I | 2e-29 | ||
| 2xmr_A | 281 | Crystal Structure Of Human Ndrg2 Protein Provides I | 1e-28 | ||
| 2xms_A | 281 | Crystal Structure Of Human Ndrg2 Protein Provides I | 1e-28 | ||
| 2qmq_A | 286 | Crystal Structure Of A N-Myc Downstream Regulated 2 | 8e-28 |
| >pdb|2XMQ|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight Into Its Role As A Tumor Suppressor Length = 281 | Back alignment and structure |
|
| >pdb|2XMR|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight Into Its Role As A Tumor Suppressor Length = 281 | Back alignment and structure |
|
| >pdb|2XMS|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight Into Its Role As A Tumor Suppressor Length = 281 | Back alignment and structure |
|
| >pdb|2QMQ|A Chain A, Crystal Structure Of A N-Myc Downstream Regulated 2 Protein (Ndrg2, Syld, Ndr2, Ai182517, Au040374) From Mus Musculus At 1.70 A Resolution Length = 286 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 299 | |||
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 2e-70 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 4e-13 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 3e-12 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 3e-11 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 8e-11 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 3e-10 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 4e-08 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 4e-08 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 4e-08 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 5e-08 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 6e-08 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 7e-08 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 8e-08 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 1e-07 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 1e-07 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 4e-07 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 5e-07 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 8e-07 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 1e-06 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 2e-06 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 2e-06 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 2e-06 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 3e-06 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 4e-06 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 4e-06 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 4e-06 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 5e-06 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 8e-06 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 2e-05 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 2e-05 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 3e-05 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 4e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 6e-05 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 2e-04 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 2e-04 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 2e-04 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 3e-04 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 3e-04 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 4e-04 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 6e-04 |
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 218 bits (557), Expect = 2e-70
Identities = 74/265 (27%), Positives = 132/265 (49%), Gaps = 18/265 (6%)
Query: 18 PSGKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN 75
+ ++T +GS++ T+YG +PA+ TY D+ LNY SCFQ LF + ++ N
Sbjct: 9 HHHHTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEII-QN 67
Query: 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTL 135
F H++ PG E GA S+D LAD I +L + ++ +GV AGAYIL+
Sbjct: 68 FVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSR 127
Query: 136 FAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195
+A+ + V GL+L++ A W +W +K G+ + +++L FS+E
Sbjct: 128 YALNHPDTVEGLVLINIDPNAKGWMDWAAHK-------LTGLTSSIPDMILGHLFSQEEL 180
Query: 196 GNAQVPESDIVQACRRLLDERQSS-NVWHFLEAINGRPDIS---EGLRKLQCRSLIFVGE 251
S+++Q R ++ + N+ + + N R D++ G L+C ++ VG+
Sbjct: 181 SG----NSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGD 236
Query: 252 SSPFHSEAVHMTSKIDRRYSALVEV 276
+P V SK+D ++ +++
Sbjct: 237 QAPHEDAVVECNSKLDPTQTSFLKM 261
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-13
Identities = 36/182 (19%), Positives = 61/182 (33%), Gaps = 12/182 (6%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
G G + E S+ +A ++ + L G+ +G GA + A+ Y
Sbjct: 50 RGT--GNNPDTLAEDY-SIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPAS 106
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPES 203
V LI V+ + + T + V LLY G V E + + A
Sbjct: 107 VTVLISVNGWLRINAHTRRCFQ-VRERLLYSGGAQAWV-EAQPLFLYPADWM--AARAPR 162
Query: 204 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHSEA 259
+ L + +N+ L A+ R D S +++C I S
Sbjct: 163 LEAEDALALAHFQGKNNLLRRLNAL-KRADFSHHADRIRCPVQIICASDDLLVPTACSSE 221
Query: 260 VH 261
+H
Sbjct: 222 LH 223
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 3e-12
Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 21/193 (10%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
PGH G S DE + D + + +L+ + ++ G + G + +A+
Sbjct: 51 PGH--GEDQSSMDET-WNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIP 107
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVM----SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQ 199
+ LIL S L +++ + +L G+ V + F ++ +
Sbjct: 108 ISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVE 167
Query: 200 VPESDIVQACRRLLDERQSSNVWHFLEAING-----RPDISEGLRKLQCRSLIFVGES-S 253
+ ++ +R S + +A+ P++ L++++ +LI GE
Sbjct: 168 I--------QHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDE 219
Query: 254 PFHSEAVHMTSKI 266
F A M + I
Sbjct: 220 KFVQIAKKMANLI 232
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-11
Identities = 39/242 (16%), Positives = 89/242 (36%), Gaps = 24/242 (9%)
Query: 25 IKTSHG-SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINP 83
+ TS G SL+ + G +KP L + + + L +F + +
Sbjct: 9 LATSDGASLAYRLDGAAEKPLLALSNSIGTT-LHMWDAQL------PALTRHFRVLRYDA 61
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
GH GA+++ ++ L + + E+L+ + +G++ G + A+ R
Sbjct: 62 RGH--GASSVPPGPY--TLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQR 117
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPES 203
+ L+L + +W ++ ++ +L M L +F +
Sbjct: 118 IERLVLANTSAWLGPAAQW--DERIAAVLQAEDMSETA-AGFLGNWFPPALLER----AE 170
Query: 204 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHSEA 259
+V+ R +L + A+ D+ L +++ +L+ G ++ H E
Sbjct: 171 PVVERFRAMLMATNRHGLAGSFAAV-RDTDLRAQLARIERPTLVIAGAYDTVTAASHGEL 229
Query: 260 VH 261
+
Sbjct: 230 IA 231
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 8e-11
Identities = 26/184 (14%), Positives = 62/184 (33%), Gaps = 21/184 (11%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
GH G + +++ L + +++ + G++ G A ++ R
Sbjct: 61 RGH--GHSEAPKGP--YTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADR 116
Query: 144 VLGLILVSPLCKAPSWTEWL--YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 201
+ + L + + S W+ K + GM + + +L R+F+ +
Sbjct: 117 IERVALCNTAARIGSPEVWVPRAVKARTE-----GMHALA-DAVLPRWFTADYMER---- 166
Query: 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHS 257
E ++ R + EAI D+ ++ +L+ G ++P
Sbjct: 167 EPVVLAMIRDVFVHTDKEGYASNCEAI-DAADLRPEAPGIKVPALVISGTHDLAATPAQG 225
Query: 258 EAVH 261
+
Sbjct: 226 RELA 229
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 3e-10
Identities = 39/264 (14%), Positives = 75/264 (28%), Gaps = 61/264 (23%)
Query: 13 METPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL 72
+ P K I T G V G +D P LV L
Sbjct: 38 LSLWPVRCKSFYISTRFGQTHVIASGPEDAPPLV-------------------------L 72
Query: 73 LH------------------NFCIYHINPPGHEFGAAAISD--DEPVLSVDDLADQIAEV 112
LH + Y ++ G + + D A+ + +V
Sbjct: 73 LHGALFSSTMWYPNIADWSSKYRTYAVDIIGD--KN---KSIPENVSGTRTDYANWLLDV 127
Query: 113 LNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172
++ G+ +G++ G F ++ RV ++SP + Y +
Sbjct: 128 FDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYAL---- 183
Query: 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRP 232
G+ ++ F + + V V+ + + + S +
Sbjct: 184 ------GLTASNGVET-FLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYV 236
Query: 233 DISEGLRKLQCRSLIFVGESSPFH 256
E LR + L+ +GE +
Sbjct: 237 FTDEELRSARVPILLLLGEHEVIY 260
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-08
Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 18/173 (10%)
Query: 84 PGHEFGAAAISD-DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG G SD P S + L I + G + G + G Y+ A +
Sbjct: 58 PGM--GN---SDPISPSTSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKD 112
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 202
+ LG+ L P+ ++ L K ++ L + + + + +
Sbjct: 113 QTLGVFLTCPVI-TADHSKRLTGKHINILEEDIN-------PVENKEYFADFLSMNVIIN 164
Query: 203 SDIVQACRRLLDERQSSNVWHFLEAINGRPDIS----EGLRKLQCRSLIFVGE 251
+ + L+ F++ + + Q I VG
Sbjct: 165 NQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGR 217
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 4e-08
Identities = 31/196 (15%), Positives = 61/196 (31%), Gaps = 28/196 (14%)
Query: 71 LLLHNFCIYHINPPGHEFGA-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAG 129
L F + +P G+ G D P + A +++ V +G + G
Sbjct: 47 LNKKLFTVVAWDPRGY--GHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDG 104
Query: 130 AYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189
+ A KY + +++ +Y + + ++ L Y
Sbjct: 105 GITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDY 164
Query: 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 249
F++ D ++ + L D L ++QC +LI
Sbjct: 165 FARTCEKWV-----DGIRQFKHLPD----------------GNICRHLLPRVQCPALIVH 203
Query: 250 GESSPF----HSEAVH 261
GE P H++ +H
Sbjct: 204 GEKDPLVPRFHADFIH 219
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 4e-08
Identities = 27/189 (14%), Positives = 57/189 (30%), Gaps = 38/189 (20%)
Query: 72 LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG-----AVMC--- 123
L ++ ++ GH G S + +V D +A + + + +
Sbjct: 38 YLEDYNCILLDLKGH--GE---SKGQCPSTVYGYIDNVANFITNSEVTKHQKNITLIGYS 92
Query: 124 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183
MG I+ A+K V ++ +S + + K+ N
Sbjct: 93 MG----GAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIYHN------------- 135
Query: 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWH-FLEAINGRPDISEGLRKLQ 242
L + E G P S+ + + ++ L A D+ + L+ +
Sbjct: 136 -QLDNNYLLECIGGIDNPLSE-----KYFETLEKDPDIMINDLIACK-LIDLVDNLKNID 188
Query: 243 CRSLIFVGE 251
V +
Sbjct: 189 IPVKAIVAK 197
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 5e-08
Identities = 28/185 (15%), Positives = 59/185 (31%), Gaps = 14/185 (7%)
Query: 72 LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAY 131
L + I I+ P G + +S+ V + D + I + HF + + + G +
Sbjct: 66 LPDSIGILTIDAPNS--GYSPVSNQANV-GLRDWVNAILMIFEHFKFQSYLLCVHSIGGF 122
Query: 132 ILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL-----LL 186
+ LG I + P + + L + L L
Sbjct: 123 AALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLS 182
Query: 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246
+ +FS + C+R L++ Q ++ F + + + + S+
Sbjct: 183 RSHFSSQQFKQL----WRGYDYCQRQLNDVQ--SLPDFKIRLALGEEDFKTGISEKIPSI 236
Query: 247 IFVGE 251
+F
Sbjct: 237 VFSES 241
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 6e-08
Identities = 34/257 (13%), Positives = 68/257 (26%), Gaps = 34/257 (13%)
Query: 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFG 89
L +GD PAL+ L L + E L + + G
Sbjct: 12 ELWSDDFGDPADPALL------LVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDT--G 63
Query: 90 A-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLI 148
+LA VL+ +G+ +G++ GA I + A+ + R+ L
Sbjct: 64 RSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLT 123
Query: 149 LVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDI--- 205
++ + + + L ++ G A +
Sbjct: 124 MLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKW 183
Query: 206 -----------VQACRRLLDE------RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248
R + + + P + LR++ +L+
Sbjct: 184 RILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVI 243
Query: 249 VGESSPF----HSEAVH 261
E P H + +
Sbjct: 244 QAEHDPIAPAPHGKHLA 260
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 7e-08
Identities = 19/162 (11%), Positives = 53/162 (32%), Gaps = 10/162 (6%)
Query: 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153
+++ + + A ++ + +GV+ GA+I + V +L++
Sbjct: 85 TENAEGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATR 144
Query: 154 CKAPSWTEWLYNKVMSNLLYYYGM----CGVVKELLLKRYFSKEVRGNAQVPESDIVQAC 209
+ ++ LY G+ + LL+ + K + + V + A
Sbjct: 145 GRLDRARQF--FNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGD---WIAM 199
Query: 210 RRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251
+ + + + L+ + + R + L+
Sbjct: 200 FSMWPIKSTPGLRCQLDCA-PQTNRLPAYRNIAAPVLVIGFA 240
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 8e-08
Identities = 35/188 (18%), Positives = 56/188 (29%), Gaps = 19/188 (10%)
Query: 84 PGHEFGA--AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141
G G D ++D A + +V L + +G + GA I L +++
Sbjct: 55 VGS--GHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRP 112
Query: 142 HRVLGLILVSP----LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 197
L++V P L P + + + LL M F+ V
Sbjct: 113 ELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLL--EMMEKNYIGWA--TVFAATVLNQ 168
Query: 198 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES----S 253
PE I + F +A D E L K+ SLI
Sbjct: 169 PDRPE--IKEELESRFCSTDPVIARQFAKAA-FFSDHREDLSKVTVPSLILQCADDIIAP 225
Query: 254 PFHSEAVH 261
+ +H
Sbjct: 226 ATVGKYMH 233
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 1e-07
Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
G FG ++ S D D I +++ + +G G + A++Y R
Sbjct: 63 VG--FGFTDRPENYN-YSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSER 119
Query: 144 VLGLILVSPLCKAPSWTEWL---------YNKVMSNLLYYYGMCGVVKELLLKRYFSKEV 194
V ++L+ TE L + + L + +V + L + + +
Sbjct: 120 VDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASI 179
Query: 195 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251
+ Q ++ + E + I+ E ++ L +LI G
Sbjct: 180 QPGFQ-------ESFSSMFPEPRQ-------RWIDALASSDEDIKTLPNETLIIHGR 222
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-07
Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 9/163 (5%)
Query: 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153
S D P +V+ + +A +++ G A + G+++GA + L A + P
Sbjct: 63 SGDTPPYAVEREIEDLAAIIDAAGGAAFVF-GMSSGAGLSLLAAASGLPITRLAVFEPPY 121
Query: 154 CKAPSWTEWL--YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRR 211
S Y + LL G + + YF E G + + QA
Sbjct: 122 AVDDSRPPVPPDYQTRLDALL----AEGRRGDAV--TYFMTEGVGVPPDLVAQMQQAPMW 175
Query: 212 LLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254
E + + + + + + +L+ G +SP
Sbjct: 176 PGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASP 218
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 4e-07
Identities = 30/232 (12%), Positives = 64/232 (27%), Gaps = 17/232 (7%)
Query: 25 IKTSHGSLSVTIYGDQDKPALVT---YPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI 81
+ L V G + PAL P + L F + +
Sbjct: 8 VPVGEAELYVEDVGPVEGPALFVLHGGPGGNAYV---LREGLQ------DYLEGFRVVYF 58
Query: 82 NPPGHEFGA-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140
+ G G + D + +VD L + + G+ + GA + ++
Sbjct: 59 DQRGS--GRSLELPQDPRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRF 116
Query: 141 RHRVLGLILVSPLCKAPSWTEWLYNKVMSNL-LYYYGMCGVVKELLLKRYFSKEVRGNAQ 199
++L + ++ L + +K K F + + +
Sbjct: 117 PQAEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPR 176
Query: 200 VPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251
+ A + + + + R D + L + + VGE
Sbjct: 177 GRMAYEWLAEGAGILGSDAPGLAFLRNGL-WRLDYTPYLTPERRPLYVLVGE 227
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 5e-07
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 22/167 (13%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
D AD IA+++ H L + MG G + A RV GL+L+
Sbjct: 68 DYDTFADDIAQLIEHLDLKEVTLVGFSMG---GGDVARYIARHGSARVAGLVLLGAVTPL 124
Query: 153 LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL--LLKRYFSKEVRGNAQVPESDIVQACR 210
+ P + + + V + ++K+ + + + N S VQ
Sbjct: 125 FGQKPDYPQGVPLDVFARFKT-----ELLKDRAQFISDFNAPFYGINKGQVVSQGVQT-- 177
Query: 211 RLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPF 255
+ L +++ ++ + D + K+ +L+ G+
Sbjct: 178 QTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQI 224
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 8e-07
Identities = 12/88 (13%), Positives = 28/88 (31%)
Query: 88 FGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGL 147
G + + + +A V++ LG + + + F ++ G
Sbjct: 72 LGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGF 131
Query: 148 ILVSPLCKAPSWTEWLYNKVMSNLLYYY 175
+ V+P+C + L+ Y
Sbjct: 132 VPVAPICTDKINAANYASVKTPALIVYG 159
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 4/170 (2%)
Query: 84 PGH-EFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
G + + V +QI ++NHFG+ +G + G + ++
Sbjct: 67 IGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPE 126
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE-VRGNAQVP 201
R + L+ + + ++++ Y +EL+ + E G ++
Sbjct: 127 RFDKVALMGSVGAPMNARPPELARLLA--FYADPRLTPYRELIHSFVYDPENFPGMEEIV 184
Query: 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251
+S A + Q + L +L L+F G
Sbjct: 185 KSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGR 234
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 2e-06
Identities = 26/169 (15%), Positives = 52/169 (30%), Gaps = 15/169 (8%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP----LCKA 156
S++ A + E+L L V +G + + I + + R+ + ++ P +
Sbjct: 80 SLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFP 139
Query: 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER 216
P + + L+ M Y + V G + E ++
Sbjct: 140 PDYVGGFERDDLEELI--NLMDKNYIGWA--NYLAPLVMGASHSSE--LIGELSGSFCTT 193
Query: 217 QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES----SPFHSEAVH 261
F +A D L + +LIF SP + +
Sbjct: 194 DPIVAKTFAKAT-FFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMA 241
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 14/164 (8%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159
D + ++L L + G + + R+ ++ +
Sbjct: 76 EYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYK 135
Query: 160 TEWLYNKVMSNLLYYYGMCGVVKEL------LLKRYFSKEVRGNAQVPESDIVQACRRLL 213
+E + + GV+ + K +F+ R + V ES
Sbjct: 136 SEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDL-VSESFR----LYNW 190
Query: 214 DERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPF 255
D ++ L+ I + D + L K +LI G+S
Sbjct: 191 DIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDAT 234
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 12/172 (6%)
Query: 84 PGHEFGAAAISD--DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141
PG +G SD D A + V++ + + +G + G + F +K+
Sbjct: 75 PG--WGK---SDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWP 129
Query: 142 HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 201
RV L+L+ S + + + L Y + LK V + +
Sbjct: 130 ERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIEN---LKLMMDIFVFDTSDLT 186
Query: 202 ESDIVQACRRLLDER--QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251
++ +L R + V PD L +++ ++LI G
Sbjct: 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGR 238
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 3e-06
Identities = 30/165 (18%), Positives = 56/165 (33%), Gaps = 16/165 (9%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
+D AD +A+++ H L AV+ G G + RV L+S
Sbjct: 68 DMDTYADDLAQLIEHLDLRDAVLFGFSTG---GGEVARYIGRHGTARVAKAGLISAVPPL 124
Query: 153 LCKAPSWTEWLYNKVMSNLLY--YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACR 210
+ K + L +V + + K+L +F G +V
Sbjct: 125 MLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAG--MVDWFW 182
Query: 211 RLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255
N + ++A D +E L+K+ +L+ G++
Sbjct: 183 LQGMAAGHKNAYDCIKAF-SETDFTEDLKKIDVPTLVVHGDADQV 226
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 23/153 (15%), Positives = 58/153 (37%), Gaps = 5/153 (3%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
A + +++ + +G G FA++Y R+ LIL+ P PS
Sbjct: 86 RGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMF 145
Query: 161 EWLYNKVMSNLLYYYGMCGV--VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS 218
+ + + L Y +K++L + + + + +A +R + ++
Sbjct: 146 APMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQG--RWEAIQRQPEHLKN 203
Query: 219 SNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251
+ ++ D++ L +++ ++ I G
Sbjct: 204 FLISAQKAPLS-TWDVTARLGEIKAKTFITWGR 235
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 24/179 (13%), Positives = 55/179 (30%), Gaps = 20/179 (11%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
D AD + ++L L + MG G + R+ +L+S
Sbjct: 68 DFDTFADDLNDLLTDLDLRDVTLVAHSMG---GGELARYVGRHGTGRLRSAVLLSAIPPV 124
Query: 153 LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRL 212
+ K+ + + ++V L G+ + + ++ +
Sbjct: 125 MIKSDKNPDGVPDEVFDALK--NGVLTERSQFW--KDTAEGFFSANRPGNKVTQGNKDAF 180
Query: 213 LDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSKI 266
+ + + ++ G D +E L+K +L+ G+ P + I
Sbjct: 181 WYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQII 239
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 30/155 (19%), Positives = 50/155 (32%), Gaps = 2/155 (1%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
+D AD IA ++ G + +G + GA A KY V ++ + +
Sbjct: 116 EANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEA 175
Query: 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSN 220
++ + V+ L RY + ES L S+
Sbjct: 176 LDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAA 235
Query: 221 VWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255
+ + R D+ R + LI GESS
Sbjct: 236 MAQTARGL--RSDLVPAYRDVTKPVLIVRGESSKL 268
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 5e-06
Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 24/175 (13%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMC---MGVTAGAYILTLFAMKY 140
PG G S LS+ D+A+ + + A+ +G + + A+ +
Sbjct: 48 PGF--GR---SRGFGALSLADMAEAVLQQAPD---KAIWLGWSLG----GLVASQIALTH 95
Query: 141 RHRVLGLILV--SPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA 198
RV L+ V SP A + V++ ++ ++R+ + + G
Sbjct: 96 PERVRALVTVASSPCFSARDEWPGIKPDVLAGFQ---QQLSDDQQRTVERFLALQTMGTE 152
Query: 199 QVPESDIVQACRRLLDERQSSN--VWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251
+ D + +L + LE + D+ + L+ + L G
Sbjct: 153 TARQ-DARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGY 205
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 23/170 (13%), Positives = 52/170 (30%), Gaps = 26/170 (15%)
Query: 10 SIDMETPPPSGKDNLIKTSHGSLSV-------TIYGDQ----DKPALVT---YPDLALNY 55
+++ T P + + S ++ + + L+ P +A NY
Sbjct: 11 TLEANTNGPGSMLSRMPVSSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNY 70
Query: 56 MSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV--LSVDDLADQIAEVL 113
++ L + H + G G + D P + D+ V
Sbjct: 71 VANIAALA--------DETGRTVIHYDQVGC--GNSTHLPDAPADFWTPQLFVDEFHAVC 120
Query: 114 NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163
G+ +G + G + A++ ++ L + + W+E
Sbjct: 121 TALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAA 170
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 25/163 (15%), Positives = 51/163 (31%), Gaps = 12/163 (7%)
Query: 101 SVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159
+D A +A + L GAV T G + A RV +LVS +
Sbjct: 70 DMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVK 129
Query: 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRY-------FSKEVRGNAQVPESDIVQACRRL 212
++ + + + + + Y F R A V + ++
Sbjct: 130 SDTNPDGLPLEVF--DEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQ-GLIDHWWLQ 186
Query: 213 LDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255
++ + + A D ++ L+++ L+ G
Sbjct: 187 GMMGAANAHYECIAAF-SETDFTDDLKRIDVPVLVAHGTDDQV 228
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 2e-05
Identities = 23/163 (14%), Positives = 44/163 (26%), Gaps = 12/163 (7%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156
D A + VL L AV+ MG + + R+ + ++ L
Sbjct: 73 DYDTFAADLNTVLETLDLQDAVLVGFSMG---TGEVARYVSSYGTARIAAVAFLASLEPF 129
Query: 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY--FSKEVRGNAQVPESDIVQACRR--L 212
T+ + ++ G+ VK Y F + + + I + R
Sbjct: 130 LLKTDDNPDGAAP-QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSW 188
Query: 213 LDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255
D + ++ +LI G
Sbjct: 189 NTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRT 231
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 3e-05
Identities = 21/189 (11%), Positives = 64/189 (33%), Gaps = 19/189 (10%)
Query: 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILT 134
++ +Y +N G G + + ++ S+ + + + + G +AG +
Sbjct: 49 HYSVYLVNLKGC--GNSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLAL 106
Query: 135 LFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV-----------MSNLLYYYGMCGVVKE 183
++A + + + +I+ + + N L ++
Sbjct: 107 VYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERK 166
Query: 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRP-DISEGLRKLQ 242
L + + E + +A + + N ++ + + D+ + L+ ++
Sbjct: 167 ALSREWALMSF-----YSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVK 221
Query: 243 CRSLIFVGE 251
S I+ G+
Sbjct: 222 IPSFIYCGK 230
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 4e-05
Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 7/155 (4%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
S LA +L G+ +G + G + T +A+ Y +V L+LV+P+
Sbjct: 96 SFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI--GLEDW 153
Query: 161 EWLYNKVMSNLLYYYGMCGV----VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER 216
+ L S +Y +++ Y++ E R R E
Sbjct: 154 KALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRES 213
Query: 217 QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251
+ N + I + L +LQ +L+ +GE
Sbjct: 214 VAWNSALTYDMI-FTQPVVYELDRLQMPTLLLIGE 247
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 6e-05
Identities = 42/364 (11%), Positives = 89/364 (24%), Gaps = 122/364 (33%)
Query: 34 VTIYGDQD--KPALV--TYPDLALNYMSCFQ------GLFFCPEACSLLLHNFCIYHINP 83
V I G K + + F+ PE +L Y I+P
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL-YQIDP 211
Query: 84 PGHEFGAAAISDDEPV--------------------LSVDDLADQIAEVLNHFGLGAVMC 123
+ + + L + ++ + A+ N F L C
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN--AKAWNAFNLS---C 266
Query: 124 --------MGVTAG--------------------AYILTLFAMKYRHRVLGL----ILVS 151
VT + +L R L + +
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326
Query: 152 PLCKA---------PS-WTEWLY------NKVMS---NLLY------YYGMCGV------ 180
P + + W W + ++ N+L + V
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--------NGRP 232
+ +LL + ++ + + + L E+Q + +I
Sbjct: 387 IPTILLSLIWFDVIK---SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEY 443
Query: 233 DISEGL-------RKLQCRSLIFVGESSPFHSE-AVHMTSKIDRRYSALVEVWTRVYISL 284
+ + + LI F+S H+ + + + ++ V++
Sbjct: 444 ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI---EHPERMTLFRMVFLD- 499
Query: 285 LGFL 288
FL
Sbjct: 500 FRFL 503
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 6e-05
Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156
+D AD +A V+ H G+ AV G G ++ A +V +L++ +
Sbjct: 71 DMDHYADDVAAVVAHLGIQGAVHVGHSTG---GGEVVRYMARHPEDKVAKAVLIAAVPPL 127
Query: 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY-------FSKEVRGNAQVPESDIVQAC 209
T + + G V + Y F R + E I+
Sbjct: 128 MVQTPGNPGGLPK--SVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASE-GIIGNW 184
Query: 210 RRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251
R + + + A + D +E L+ +Q L+ G+
Sbjct: 185 WRQGMIGSAKAHYDGIVAF-SQTDFTEDLKGIQQPVLVMHGD 225
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 22/167 (13%), Positives = 43/167 (25%), Gaps = 20/167 (11%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
D A + VL L AV+ G + + R+ + ++
Sbjct: 72 DYDTFAADLNTVLETLDLQDAVLVGFSTG---TGEVARYVSSYGTARIAKVAFLASLEPF 128
Query: 153 LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY--FSKEVRGNAQVPESDIVQACR 210
L K + + ++ G+ VK Y F + + + I +
Sbjct: 129 LLKTDDNPDGAAPQE-----FFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAV 183
Query: 211 R--LLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255
R D + ++ +LI G
Sbjct: 184 RNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRT 230
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 22/159 (13%)
Query: 101 SVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159
+ D + + + V +G + G ++ + V L+L+
Sbjct: 87 TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEI 146
Query: 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSS 219
E L + Y +E + + K + + + ++
Sbjct: 147 HEDLR------PIINYDF---TREGM--VHLVKALTNDGFKIDDAMI---NSRYTYATDE 192
Query: 220 NVWHFLEAI-------NGRPDISEGLRKLQCRSLIFVGE 251
A G E +RK+Q +L+ G+
Sbjct: 193 ATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGK 231
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 24/179 (13%), Positives = 49/179 (27%), Gaps = 17/179 (9%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP----LCK 155
D A + VL L V+ + A RV L ++ L +
Sbjct: 72 DYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQ 131
Query: 156 APSWTEWLYNKVMSNLL--YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLL 213
E + +V + + K +++ + +++ E V +
Sbjct: 132 RDDNPEGVPQEVFDGIEAAAKGDRFAWFTD-FYKNFYNLDENLGSRISE-QAVTGSWNVA 189
Query: 214 DERQSSNVWHFLEAINGRPDISEGLRKLQCRS---LIFVGESS---PFHSEAVHMTSKI 266
S+ V + D + ++ LI G P + A +
Sbjct: 190 --IGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV 246
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Length = 313 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 3e-04
Identities = 16/70 (22%), Positives = 26/70 (37%)
Query: 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161
DL I + H G+ G + G+ + +A + +V L+L E
Sbjct: 85 TWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELE 144
Query: 162 WLYNKVMSNL 171
W Y + S L
Sbjct: 145 WFYQEGASRL 154
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 3e-04
Identities = 14/96 (14%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR-HRVLGLILVSPLCKAPSW 159
+ E+L+ G+ + + + G ++L + R I++ L AP
Sbjct: 75 GYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKP 134
Query: 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195
++ + + + ++ L + K VR
Sbjct: 135 DFAKSLTLLKDPERWREGTHGLFDVWLDGHDEKRVR 170
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 4e-04
Identities = 12/69 (17%), Positives = 22/69 (31%)
Query: 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161
L I + G+ + G + G+ + +A + RV ++L
Sbjct: 88 TWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLH 147
Query: 162 WLYNKVMSN 170
W Y S
Sbjct: 148 WYYQDGASR 156
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 6e-04
Identities = 38/274 (13%), Positives = 80/274 (29%), Gaps = 39/274 (14%)
Query: 25 IKTSHGSLSVTIYGDQDKPALVT---YPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI 81
++ + + +G + P ++ + +Q + A L + +
Sbjct: 9 LEFGGNQICLCSWGSPEHPVVLCIHGILEQG----LAWQEV-----ALPLAAQGYRVVAP 59
Query: 82 NPPGHEFGA-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140
+ GH G + + S QI V+ ++ +G + GA + T A
Sbjct: 60 DLFGH--GRSSHLEMVTS-YSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVR 116
Query: 141 RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE------V 194
++ LILV A + ++ L Y +
Sbjct: 117 PKKIKELILVELPLPAEESKKESAVNQLTTCLDYL-----SSTPQHPIFPDVATAASRLR 171
Query: 195 RGNAQVPESDIVQACRRLLDERQSSNVWHF------------LEAINGRPDISEGLRKLQ 242
+ + E +R+ Q W + GR E L+ +Q
Sbjct: 172 QAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQ 231
Query: 243 CRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 276
+ + G+SS + K+ + V +
Sbjct: 232 VPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFL 265
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.98 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.98 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.98 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.97 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.97 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.97 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.97 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.97 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.97 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.97 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.97 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.97 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.97 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.94 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.96 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.96 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.96 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.96 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.96 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.96 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.96 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.95 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.95 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.95 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.95 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.95 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.95 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.95 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.94 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.94 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.94 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.93 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.93 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.93 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.93 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.93 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.92 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.92 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.92 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.92 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.92 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.92 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.91 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.91 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.91 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.91 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.91 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.91 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.91 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.91 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.91 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.91 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.9 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.9 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.9 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.9 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.89 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.89 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.89 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.89 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.89 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.89 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.89 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.88 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.88 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.88 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.88 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.88 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.88 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.88 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.87 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.87 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.87 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.87 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.87 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.87 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.87 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.87 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.86 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.86 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.86 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.86 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.86 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.85 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.85 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.85 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.85 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.85 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.84 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.84 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.84 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.84 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.83 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.83 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.83 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.83 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.82 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.82 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.82 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.82 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.81 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.81 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.81 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.81 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.81 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.8 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.8 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.8 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.8 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.8 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.8 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.79 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.79 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.79 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.78 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.78 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.78 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.78 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.78 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.78 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.77 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.77 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.77 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.76 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.76 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.76 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.76 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.75 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.75 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.74 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.74 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.73 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.73 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.72 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.72 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.72 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.71 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.7 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.7 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.69 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.68 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.68 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.68 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.68 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.67 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.66 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.66 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.62 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.6 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.59 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.59 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.53 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.52 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.51 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.48 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.36 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.24 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.24 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.2 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.68 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.65 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.6 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.59 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.53 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.46 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.44 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.39 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.35 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.34 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.33 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.31 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.27 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.27 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.21 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.2 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.04 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.03 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.03 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.99 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.99 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.93 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.76 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 97.71 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.7 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.6 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.54 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.42 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.26 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 97.23 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.19 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.16 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.15 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 97.06 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.99 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.99 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.64 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.62 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.37 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 95.81 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 95.61 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 95.39 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 95.25 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 95.18 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 94.57 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 94.35 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 92.91 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 93.12 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 91.56 | |
| 3ho6_A | 267 | Toxin A; inositol phosphate, enterotoxin; HET: IHP | 83.88 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-41 Score=264.05 Aligned_cols=253 Identities=16% Similarity=0.244 Sum_probs=185.4
Q ss_pred ceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccH
Q 022316 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (299)
+++..++.+|+|...|++++|+|||+||++.+... |.+. .+.|.++|+|+++|+||||+|+.+. ..+++
T Consensus 8 ~~~~~~g~~l~y~~~G~~~~p~lvl~hG~~~~~~~------w~~~-~~~L~~~~~vi~~D~rG~G~S~~~~----~~~~~ 76 (266)
T 3om8_A 8 FLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHM------WDAQ-LPALTRHFRVLRYDARGHGASSVPP----GPYTL 76 (266)
T ss_dssp EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGG------GGGG-HHHHHTTCEEEEECCTTSTTSCCCC----SCCCH
T ss_pred EEeccCCcEEEEEecCCCCCCEEEEeCCCccCHHH------HHHH-HHHhhcCcEEEEEcCCCCCCCCCCC----CCCCH
Confidence 45566778999999997778999999999988744 7444 5667789999999999999996432 24899
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHH
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
+++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.........|... +.......+.....
T Consensus 77 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~- 153 (266)
T 3om8_A 77 ARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDER--IAAVLQAEDMSETA- 153 (266)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHH--HHHHHHCSSSHHHH-
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHH--HHHHHccccHHHHH-
Confidence 999999999999999999999999999999999999999999999999987655433333321 11111112222222
Q ss_pred HHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhH
Q 022316 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 260 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~ 260 (299)
...+..++....... .++..+.+...+.......+......+.. .+..+.+.+|++|+|+|+|++|.++ +..+
T Consensus 154 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~ 228 (266)
T 3om8_A 154 AGFLGNWFPPALLER----AEPVVERFRAMLMATNRHGLAGSFAAVRD-TDLRAQLARIERPTLVIAGAYDTVTAASHGE 228 (266)
T ss_dssp HHHHHHHSCHHHHHS----CCHHHHHHHHHHHTSCHHHHHHHHHHHHT-CBCTTTGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HHHHHHhcChhhhhc----ChHHHHHHHHHHHhCCHHHHHHHHHHhhc-cchhhHhcCCCCCEEEEEeCCCCCCCHHHHH
Confidence 234445555443322 24455555555544444445444444433 5677789999999999999999997 6677
Q ss_pred HHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 261 HMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
.+.+.+++ +++++++ +||.++.|.++.++.-+..
T Consensus 229 ~l~~~ip~--a~~~~i~-~gH~~~~e~p~~~~~~i~~ 262 (266)
T 3om8_A 229 LIAASIAG--ARLVTLP-AVHLSNVEFPQAFEGAVLS 262 (266)
T ss_dssp HHHHHSTT--CEEEEES-CCSCHHHHCHHHHHHHHHH
T ss_pred HHHHhCCC--CEEEEeC-CCCCccccCHHHHHHHHHH
Confidence 88888876 8889997 8999999877777655443
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=250.28 Aligned_cols=248 Identities=15% Similarity=0.235 Sum_probs=173.3
Q ss_pred ceeecCCceEEEEeccCCC--CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 23 NLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~--~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
.+++.++.+++|...|+++ +|+|||+||++.++.. |.+. .+.|.++|+|+++|+||||.|..+. ..+
T Consensus 5 ~~~~~~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~~------~~~~-~~~L~~~~~vi~~D~~G~G~S~~~~----~~~ 73 (266)
T 2xua_A 5 PYAAVNGTELHYRIDGERHGNAPWIVLSNSLGTDLSM------WAPQ-VAALSKHFRVLRYDTRGHGHSEAPK----GPY 73 (266)
T ss_dssp CEEECSSSEEEEEEESCSSSCCCEEEEECCTTCCGGG------GGGG-HHHHHTTSEEEEECCTTSTTSCCCS----SCC
T ss_pred CeEEECCEEEEEEEcCCccCCCCeEEEecCccCCHHH------HHHH-HHHHhcCeEEEEecCCCCCCCCCCC----CCC
Confidence 3577888899999999755 8899999999988744 7444 5566778999999999999996432 248
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhH
Q 022316 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (299)
+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.........+.... .. ....+....
T Consensus 74 ~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~ 150 (266)
T 2xua_A 74 TIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRA--VK-ARTEGMHAL 150 (266)
T ss_dssp CHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHH--HH-HHHHCHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHH--HH-HHhcChHHH
Confidence 999999999999999999999999999999999999999999999999999876553322222110 00 011111111
Q ss_pred HHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hh
Q 022316 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 258 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~ 258 (299)
. ......++....... +++..+.+...+.......+......+.. .+..+.+.+|++|+|+|+|++|.++ +.
T Consensus 151 ~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lvi~G~~D~~~~~~~ 224 (266)
T 2xua_A 151 A-DAVLPRWFTADYMER----EPVVLAMIRDVFVHTDKEGYASNCEAIDA-ADLRPEAPGIKVPALVISGTHDLAATPAQ 224 (266)
T ss_dssp H-HHHHHHHSCHHHHHH----CHHHHHHHHHHHHTSCHHHHHHHHHHHHH-CCCGGGGGGCCSCEEEEEETTCSSSCHHH
T ss_pred H-HHHHHHHcCcccccC----CHHHHHHHHHHHhhCCHHHHHHHHHHHhc-cCchhhhccCCCCEEEEEcCCCCcCCHHH
Confidence 1 112233333222111 23444444444433333333333333322 3556678899999999999999997 55
Q ss_pred hHHHhhhccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 259 AVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
.+.+.+.+++ +++++++ +||.++.|-++.++.
T Consensus 225 ~~~~~~~~~~--~~~~~~~-~gH~~~~e~p~~~~~ 256 (266)
T 2xua_A 225 GRELAQAIAG--ARYVELD-ASHISNIERADAFTK 256 (266)
T ss_dssp HHHHHHHSTT--CEEEEES-CCSSHHHHTHHHHHH
T ss_pred HHHHHHhCCC--CEEEEec-CCCCchhcCHHHHHH
Confidence 6777777765 7899999 999999876555443
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=243.65 Aligned_cols=262 Identities=15% Similarity=0.151 Sum_probs=172.3
Q ss_pred cceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
..+++.++.+++|...|++++|+|||+||++.+... |.+.+.+.|. .||+|+++|+||||+|+...+ ....+
T Consensus 3 ~~~~~~~g~~l~y~~~G~~~~~~vvllHG~~~~~~~------w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~-~~~~~ 75 (298)
T 1q0r_A 3 ERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALG------WPDEFARRLADGGLHVIRYDHRDTGRSTTRDF-AAHPY 75 (298)
T ss_dssp EEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGG------SCHHHHHHHHTTTCEEEEECCTTSTTSCCCCT-TTSCC
T ss_pred CceeccCCeEEEEEeccCCCCCeEEEEcCCCCCccc------hHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCC-CcCCc
Confidence 456777888999999997778899999999988744 7655545554 579999999999999975211 12358
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC-CCcchhH---------------HHH
Q 022316 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC-KAPSWTE---------------WLY 164 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~-~~~~~~~---------------~~~ 164 (299)
+++++++|+.++++.+++++++|+||||||.+|+.+|.++|++|+++|++++.. ....... ...
T Consensus 76 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (298)
T 1q0r_A 76 GFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQ 155 (298)
T ss_dssp CHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhccccccc
Confidence 999999999999999999999999999999999999999999999999999876 2111000 000
Q ss_pred hhhhhhhHHh----hcchhHHHHHHHH--hhhccccccCCCCCchHHHHHHHHhhhcc-cccch-HHHHHhhcCCCChhh
Q 022316 165 NKVMSNLLYY----YGMCGVVKELLLK--RYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNV-WHFLEAINGRPDISE 236 (299)
Q Consensus 165 ~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 236 (299)
...+..+... ....... ..... ..+..... ....+...+.+...+... ..... ..... .....+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 230 (298)
T 1q0r_A 156 QPFLDALALMNQPAEGRAAEV-AKRVSKWRILSGTGV---PFDDAEYARWEERAIDHAGGVLAEPYAHYS-LTLPPPSRA 230 (298)
T ss_dssp HHHHHHHHHHHSCCCSHHHHH-HHHHHHHHHHHCSSS---CCCHHHHHHHHHHHHHHTTTCCSCCCGGGG-CCCCCGGGG
T ss_pred HHHHHHHhccCcccccHHHHH-HHHHHhhhhccCCCC---CCCHHHHHHHHHHHhhccCCccchhhhhhh-hhcCccccc
Confidence 0000011000 0001111 11110 01110000 000122222222222211 11222 12222 222245666
Q ss_pred h-hccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 237 G-LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 237 ~-~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
. +++|++|+|+|+|++|.++ +..+.+.+.+++ ++++++|++||....+|.+.+..|+++
T Consensus 231 ~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gHe~p~~~~~~i~~fl~~ 292 (298)
T 1q0r_A 231 AELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPT--ARLAEIPGMGHALPSSVHGPLAEVILA 292 (298)
T ss_dssp GGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTT--EEEEEETTCCSSCCGGGHHHHHHHHHH
T ss_pred ccccccCCCEEEEEeCCCccCCHHHHHHHHHhCCC--CEEEEcCCCCCCCcHHHHHHHHHHHHH
Confidence 7 8999999999999999987 566777777765 899999999998778899999988875
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=243.36 Aligned_cols=249 Identities=15% Similarity=0.170 Sum_probs=161.8
Q ss_pred ceEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHH
Q 022316 30 GSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (299)
Q Consensus 30 ~~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (299)
|.|+|...|+ +++|+|||+||++.++.. |.+. .+.|.++|+|+++|+||||.|..+.. ..++++++++
T Consensus 1 ~~i~y~~~g~~~~~~~~vvllHG~~~~~~~------w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~~~---~~~~~~~~a~ 70 (268)
T 3v48_A 1 GHMKLSLSPPPYADAPVVVLISGLGGSGSY------WLPQ-LAVLEQEYQVVCYDQRGTGNNPDTLA---EDYSIAQMAA 70 (268)
T ss_dssp CCSCCEECCCSSTTCCEEEEECCTTCCGGG------GHHH-HHHHHTTSEEEECCCTTBTTBCCCCC---TTCCHHHHHH
T ss_pred CceEEEecCCCCCCCCEEEEeCCCCccHHH------HHHH-HHHHhhcCeEEEECCCCCCCCCCCcc---ccCCHHHHHH
Confidence 4578888885 368999999999988744 7444 56678899999999999999964322 3489999999
Q ss_pred HHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHH
Q 022316 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (299)
Q Consensus 108 ~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (299)
|+.++++.+++++++|+||||||.+|+.+|.++|++|+++|++++............... ...+...+..... .....
T Consensus 71 dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~ 148 (268)
T 3v48_A 71 ELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVR-ERLLYSGGAQAWV-EAQPL 148 (268)
T ss_dssp HHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHH-HHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHH-HHHHhccchhhhh-hhhhh
Confidence 999999999999999999999999999999999999999999998765543222111000 0110111111111 00000
Q ss_pred hhhccccccCCCCCchHHHHHHHHhhhc-ccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhh
Q 022316 188 RYFSKEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 264 (299)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~ 264 (299)
..+........ .+............ .....+...+..+.. .+....+++|+||||+|+|++|.++ +.++.+.+
T Consensus 149 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~ 224 (268)
T 3v48_A 149 FLYPADWMAAR---APRLEAEDALALAHFQGKNNLLRRLNALKR-ADFSHHADRIRCPVQIICASDDLLVPTACSSELHA 224 (268)
T ss_dssp HHSCHHHHHTT---HHHHHHHHHHHHHTCCCHHHHHHHHHHHHH-CBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHH
T ss_pred hcCchhhhhcc---cccchhhHHHHHhhcCchhHHHHHHHHHhc-cchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHH
Confidence 01111110000 01111111111111 111122222222222 3556678899999999999999987 66777888
Q ss_pred hccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 265 KIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 265 ~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.+++ .++++++++||.++.|-++.++..+.
T Consensus 225 ~~p~--~~~~~~~~~GH~~~~e~p~~~~~~i~ 254 (268)
T 3v48_A 225 ALPD--SQKMVMPYGGHACNVTDPETFNALLL 254 (268)
T ss_dssp HCSS--EEEEEESSCCTTHHHHCHHHHHHHHH
T ss_pred hCCc--CeEEEeCCCCcchhhcCHHHHHHHHH
Confidence 8865 88999999999999886666554433
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-37 Score=243.37 Aligned_cols=246 Identities=13% Similarity=0.069 Sum_probs=159.8
Q ss_pred ceeecCCceEEEEeccCCCCCeEEEecccccchh-hhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYM-SCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~-~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
.++..++.+++|...|++++|+|||+||++.++. . |.+. .+.|+++|+|+++|+||||.|+.. +.....++
T Consensus 6 ~~~~~~g~~l~~~~~G~~~~~~vvllHG~~~~~~~~------w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~-~~~~~~~~ 77 (286)
T 2yys_A 6 GYVPVGEAELYVEDVGPVEGPALFVLHGGPGGNAYV------LREG-LQDYLEGFRVVYFDQRGSGRSLEL-PQDPRLFT 77 (286)
T ss_dssp EEEECSSCEEEEEEESCTTSCEEEEECCTTTCCSHH------HHHH-HGGGCTTSEEEEECCTTSTTSCCC-CSCGGGCC
T ss_pred eEEeECCEEEEEEeecCCCCCEEEEECCCCCcchhH------HHHH-HHHhcCCCEEEEECCCCCCCCCCC-ccCcccCc
Confidence 4677788899999999767899999999998875 4 6444 566688999999999999999641 11111589
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH-----------hhhhhh
Q 022316 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-----------NKVMSN 170 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-----------~~~~~~ 170 (299)
++++++|+.++++++++++++|+||||||.+|+.+|.++|+ |+++|++++............ ...+..
T Consensus 78 ~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (286)
T 2yys_A 78 VDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKE 156 (286)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999 999999998762111000000 000000
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHH--HHHhhcCCCChhhhhccccccEEEE
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWH--FLEAINGRPDISEGLRKLQCRSLIF 248 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~P~lii 248 (299)
.+......... +... ++.... ....+................ ....... .+....+.+|++|+|+|
T Consensus 157 ~~~~~~~~~~~-~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lvi 224 (286)
T 2yys_A 157 ALKREEPKALF-DRLM--FPTPRG--------RMAYEWLAEGAGILGSDAPGLAFLRNGLWR-LDYTPYLTPERRPLYVL 224 (286)
T ss_dssp HHHHSCHHHHH-HHHH--CSSHHH--------HHHHHHHHHHTTCCCCSHHHHHHHHTTGGG-CBCGGGCCCCSSCEEEE
T ss_pred HhccCChHHHH-Hhhh--ccCCcc--------ccChHHHHHHHhhccccccchhhccccccc-CChhhhhhhcCCCEEEE
Confidence 00000000000 0000 111100 000011111111111111111 1122211 34556788999999999
Q ss_pred ecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 249 VGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 249 ~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
+|++|.++ + .+.+.+ +++ ++++++|++||.++.|-++.++.
T Consensus 225 ~G~~D~~~~~~-~~~~~~-~~~--~~~~~i~~~gH~~~~e~p~~~~~ 267 (286)
T 2yys_A 225 VGERDGTSYPY-AEEVAS-RLR--APIRVLPEAGHYLWIDAPEAFEE 267 (286)
T ss_dssp EETTCTTTTTT-HHHHHH-HHT--CCEEEETTCCSSHHHHCHHHHHH
T ss_pred EeCCCCcCCHh-HHHHHh-CCC--CCEEEeCCCCCCcChhhHHHHHH
Confidence 99999987 5 777777 754 88999999999998875555443
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=243.23 Aligned_cols=259 Identities=12% Similarity=0.107 Sum_probs=162.3
Q ss_pred CcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
+..++++++.+++|...|++.+|+|||+||++.++.. |.+. .+.|.++|+||++|+||||.|+.+ ...+
T Consensus 8 ~~~~~~~~g~~l~y~~~G~g~~~pvvllHG~~~~~~~------w~~~-~~~L~~~~~via~Dl~G~G~S~~~----~~~~ 76 (316)
T 3afi_E 8 EIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHI------WRNI-LPLVSPVAHCIAPDLIGFGQSGKP----DIAY 76 (316)
T ss_dssp --CEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGG------GTTT-HHHHTTTSEEEEECCTTSTTSCCC----SSCC
T ss_pred cceeEEeCCEEEEEEEeCCCCCCeEEEECCCCCchHH------HHHH-HHHHhhCCEEEEECCCCCCCCCCC----CCCC
Confidence 3456788899999999995333499999999998754 7554 566777899999999999999642 1258
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHH---------Hhhhhhhh
Q 022316 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL---------YNKVMSNL 171 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---------~~~~~~~~ 171 (299)
+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++......+.... ........
T Consensus 77 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (316)
T 3afi_E 77 RFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAV 156 (316)
T ss_dssp CHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHH
Confidence 999999999999999999999999999999999999999999999999999743211111000 00000000
Q ss_pred HHhhcchhHHH------HHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhcCC----------CCh
Q 022316 172 LYYYGMCGVVK------ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGR----------PDI 234 (299)
Q Consensus 172 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~ 234 (299)
+.......... ......++....... ..++..+.+...+... ...........+... .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T 3afi_E 157 FRKFRTPGEGEAMILEANAFVERVLPGGIVRK---LGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSA 233 (316)
T ss_dssp HHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSC---CCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHH
T ss_pred HHHhcCCchhhHHHhccchHHHHhcccccCCC---CCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHH
Confidence 00000000000 001111111100000 0123333332221110 001111111111000 112
Q ss_pred hhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 235 SEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 235 ~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
...+++|++|+|+|+|++|.++ +..+.+.+.+++ ++++++|++||.++.|.++.++..+
T Consensus 234 ~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~GH~~~~e~p~~~~~~i 294 (316)
T 3afi_E 234 HAALAASSYPKLLFTGEPGALVSPEFAERFAASLTR--CALIRLGAGLHYLQEDHADAIGRSV 294 (316)
T ss_dssp HHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSS--EEEEEEEEECSCHHHHHHHHHHHHH
T ss_pred HHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCCC--CeEEEcCCCCCCchhhCHHHHHHHH
Confidence 3456789999999999999987 567777777765 8899999999999988666655433
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=245.17 Aligned_cols=266 Identities=10% Similarity=0.068 Sum_probs=164.9
Q ss_pred CCCcceeecCCceEEEEeccCC--C--CCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHGSLSVTIYGDQ--D--KPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~--~--~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~ 93 (299)
+.++.++++++.+++|...|+. + +++|||+||++.+... |...+..+.. .+|+||++|+||||+|+...
T Consensus 27 ~~~~~~v~~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~------w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~ 100 (330)
T 3nwo_A 27 PVSSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHN------YVANIAALADETGRTVIHYDQVGCGNSTHLP 100 (330)
T ss_dssp --CEEEEEETTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSG------GGGGGGGHHHHHTCCEEEECCTTSTTSCCCT
T ss_pred cCcceeEeecCcEEEEEEecCccCCCCCCcEEEECCCCCCchh------HHHHHHHhccccCcEEEEECCCCCCCCCCCC
Confidence 3466789999999999999973 3 4489999998877644 5455444443 59999999999999997522
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhh--hh---
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK--VM--- 168 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~--- 168 (299)
+.....++++++++|+.++++.+++++++|+||||||.+|+.+|.++|++|+++|+++++.....+....... .+
T Consensus 101 ~~~~~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 180 (330)
T 3nwo_A 101 DAPADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAE 180 (330)
T ss_dssp TSCGGGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHH
T ss_pred CCccccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHH
Confidence 2223457999999999999999999999999999999999999999999999999999876433221110000 00
Q ss_pred -hhhHH---hhc-chhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHH--------HhhcCCCChh
Q 022316 169 -SNLLY---YYG-MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFL--------EAINGRPDIS 235 (299)
Q Consensus 169 -~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 235 (299)
...+. ..+ ............++....... ........+.+..... ....+.... ..+ ...+..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~ 256 (330)
T 3nwo_A 181 TRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRV-VPTPQDFADSVAQMEA--EPTVYHTMNGPNEFHVVGTL-GDWSVI 256 (330)
T ss_dssp HHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCS-SSCCHHHHHHHHHHHH--SCHHHHHHTCSCSSSCCSGG-GGCBCG
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccc-cCCCHHHHHHHHhhcc--chhhhhcccCchhhhhhccc-cCCchh
Confidence 00000 000 000000000011111100000 0001122211111100 000010000 001 113455
Q ss_pred hhhccccccEEEEecCCCcch-hhhHHHhhhccccCceEEEEcCchhhhHhHHHHH----HHHhhh
Q 022316 236 EGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVL----LASFCE 296 (299)
Q Consensus 236 ~~~~~i~~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~----~~~~~~ 296 (299)
+.+.+|++|+|+|+|++|.++ ....++.+.+++ ++++++|++||.++.|-++. +..|++
T Consensus 257 ~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~ip~--~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~ 320 (330)
T 3nwo_A 257 DRLPDVTAPVLVIAGEHDEATPKTWQPFVDHIPD--VRSHVFPGTSHCTHLEKPEEFRAVVAQFLH 320 (330)
T ss_dssp GGGGGCCSCEEEEEETTCSSCHHHHHHHHHHCSS--EEEEEETTCCTTHHHHSHHHHHHHHHHHHH
T ss_pred hhcccCCCCeEEEeeCCCccChHHHHHHHHhCCC--CcEEEeCCCCCchhhcCHHHHHHHHHHHHH
Confidence 678899999999999999987 556677777765 89999999999999885554 445554
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=241.91 Aligned_cols=258 Identities=10% Similarity=-0.006 Sum_probs=162.8
Q ss_pred CCCcceeecCC----ceEEEEeccCCC-CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSH----GSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 19 ~~~~~~i~~~~----~~l~~~~~g~~~-~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
+.+.+++++++ .+++|...|+++ +|+|||+||++.++.. |.+.+..+..+||+|+++|+||||+|+.+.
T Consensus 18 ~~~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~------w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~ 91 (297)
T 2xt0_A 18 PYAPHYLEGLPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWSFL------YRKMLPVFTAAGGRVVAPDLFGFGRSDKPT 91 (297)
T ss_dssp CCCCEEECCCTTCTTCCEEEEEESCTTCSCEEEEECCTTCCGGG------GTTTHHHHHHTTCEEEEECCTTSTTSCEES
T ss_pred CCccEEEeccCCCCceEEEEEEccCCCCCCeEEEECCCCCccee------HHHHHHHHHhCCcEEEEeCCCCCCCCCCCC
Confidence 34556788888 899999999756 8899999999887744 755544443457999999999999996432
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch-hHHHHhhhhhhhH
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSNLL 172 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~ 172 (299)
....++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++....... .... .......
T Consensus 92 --~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~ 167 (297)
T 2xt0_A 92 --DDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGF--ESWRDFV 167 (297)
T ss_dssp --CGGGCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHH--HHHHHHH
T ss_pred --CcccCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhH--HHHHHHh
Confidence 1235899999999999999999999999999999999999999999999999999985422111 0000 0000000
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhccccc-chHHHHHhhcC---------CCChhhhhc-cc
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSS-NVWHFLEAING---------RPDISEGLR-KL 241 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~-~i 241 (299)
....... . ........ ... .++..+.+...+...... ....+...... ..+..+.+. +|
T Consensus 168 ~~~~~~~-~-~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 237 (297)
T 2xt0_A 168 ANSPDLD-V-GKLMQRAI-PGI-------TDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQW 237 (297)
T ss_dssp HTCTTCC-H-HHHHHHHS-TTC-------CHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTC
T ss_pred hcccccc-h-hHHHhccC-ccC-------CHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhcc
Confidence 0000000 0 00111110 000 122222222111110000 01111111000 012234577 89
Q ss_pred cccEEEEecCCCcch-hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 242 QCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 242 ~~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
++|+|+|+|++|.++ +...++.+.+++.....++++++||.++. .++.++..+.+
T Consensus 238 ~~P~Lvi~G~~D~~~~~~~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~ 293 (297)
T 2xt0_A 238 SGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAALA 293 (297)
T ss_dssp CSCEEEEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHHHH
T ss_pred CCCeEEEEeCCCcccChHHHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHHHH
Confidence 999999999999987 55667777777644444558999999987 66666555444
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=233.93 Aligned_cols=254 Identities=13% Similarity=0.085 Sum_probs=163.3
Q ss_pred CCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
+.+.++++.++.+++|...| ++|+|||+||++.+..+. ..|... .+.|+++|+|+++|+||||.|+.+. ..
T Consensus 4 ~~~~~~~~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~~---~~w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~~---~~ 74 (282)
T 1iup_A 4 LEIGKSILAAGVLTNYHDVG--EGQPVILIHGSGPGVSAY---ANWRLT-IPALSKFYRVIAPDMVGFGFTDRPE---NY 74 (282)
T ss_dssp TTCCEEEEETTEEEEEEEEC--CSSEEEEECCCCTTCCHH---HHHTTT-HHHHTTTSEEEEECCTTSTTSCCCT---TC
T ss_pred ccccceEEECCEEEEEEecC--CCCeEEEECCCCCCccHH---HHHHHH-HHhhccCCEEEEECCCCCCCCCCCC---CC
Confidence 34557788899999999998 578899999987654311 126444 4556889999999999999996532 12
Q ss_pred cccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcch
Q 022316 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
.++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++............ . ........
T Consensus 75 ~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~--~---~~~~~~~~ 149 (282)
T 1iup_A 75 NYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLN--A---VWGYTPSI 149 (282)
T ss_dssp CCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHH--H---HHTCCSCH
T ss_pred CCCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHH--H---HhcCCCcH
Confidence 489999999999999999999999999999999999999999999999999998764321111000 0 00000000
Q ss_pred hHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCC---------CChhhhhccccccEEEEe
Q 022316 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR---------PDISEGLRKLQCRSLIFV 249 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~P~lii~ 249 (299)
... ......++...... .++..+....... .+ ........+... ....+.+.+|++|+|+|+
T Consensus 150 ~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 220 (282)
T 1iup_A 150 ENM-RNLLDIFAYDRSLV-----TDELARLRYEASI--QP-GFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIH 220 (282)
T ss_dssp HHH-HHHHHHHCSSGGGC-----CHHHHHHHHHHHT--ST-THHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred HHH-HHHHHHhhcCcccC-----CHHHHHHHHhhcc--Ch-HHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEe
Confidence 111 11111111111000 1222221111110 01 111111111100 011256789999999999
Q ss_pred cCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHH----HHHhhhh
Q 022316 250 GESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVL----LASFCES 297 (299)
Q Consensus 250 G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~----~~~~~~~ 297 (299)
|++|.++ +.++++.+.+++ +++++++++||.++.|..+. +..|+++
T Consensus 221 G~~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 221 GREDQVVPLSSSLRLGELIDR--AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp ETTCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred cCCCCCCCHHHHHHHHHhCCC--CeEEEECCCCCCccccCHHHHHHHHHHHHhc
Confidence 9999997 566677777765 88999999999998875544 4456544
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=236.47 Aligned_cols=250 Identities=16% Similarity=0.130 Sum_probs=161.9
Q ss_pred eeecCC-ceEEEEeccCCCCCeEEEecccc---cchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 24 LIKTSH-GSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 24 ~i~~~~-~~l~~~~~g~~~~p~lvl~HG~~---~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
++++++ .+++|...|++..|+|||+||++ .+... |.+. .+.|.++|+|+++|+||||.|+.+. ...
T Consensus 17 ~~~~~g~~~l~y~~~G~g~~~~vvllHG~~pg~~~~~~------w~~~-~~~L~~~~~via~Dl~G~G~S~~~~---~~~ 86 (291)
T 2wue_A 17 EVDVDGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTN------FSRN-IAVLARHFHVLAVDQPGYGHSDKRA---EHG 86 (291)
T ss_dssp EEESSSEEEEEEEEECTTCSSEEEEECCCCTTCCHHHH------TTTT-HHHHTTTSEEEEECCTTSTTSCCCS---CCS
T ss_pred EEEeCCcEEEEEEecCCCCCCcEEEECCCCCccchHHH------HHHH-HHHHHhcCEEEEECCCCCCCCCCCC---CCC
Confidence 678888 89999999954445999999997 44433 6554 4556777999999999999996532 124
Q ss_pred ccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcc-h----hHHHHhhhhhhhHHh
Q 022316 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-W----TEWLYNKVMSNLLYY 174 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~-~----~~~~~~~~~~~~~~~ 174 (299)
++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++...... . .... ......+..
T Consensus 87 ~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 164 (291)
T 2wue_A 87 QFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGV--KRLSKFSVA 164 (291)
T ss_dssp SHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHH--HHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhh--HHHHHHhcc
Confidence 89999999999999999999999999999999999999999999999999998764221 0 1100 011111000
Q ss_pred hcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHh---hcC--C--CChhhhhccccccEEE
Q 022316 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA---ING--R--PDISEGLRKLQCRSLI 247 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~--~~~~~~~~~i~~P~li 247 (299)
...... ...+..++...... .++..+...... ..+..+...... ... . ....+.+.+|++|+|+
T Consensus 165 -~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv 235 (291)
T 2wue_A 165 -PTRENL-EAFLRVMVYDKNLI-----TPELVDQRFALA--STPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLL 235 (291)
T ss_dssp -CCHHHH-HHHHHTSCSSGGGS-----CHHHHHHHHHHH--TSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEE
T ss_pred -CCHHHH-HHHHHHhccCcccC-----CHHHHHHHHHHh--cCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEE
Confidence 001111 11122111111000 122222222111 111111111111 111 0 1122568899999999
Q ss_pred EecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 248 FVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 248 i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
|+|++|.++ +.++.+.+.+++ +++++++++||.++.|.++.++..+.
T Consensus 236 i~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~ 284 (291)
T 2wue_A 236 IWGREDRVNPLDGALVALKTIPR--AQLHVFGQCGHWVQVEKFDEFNKLTI 284 (291)
T ss_dssp EEETTCSSSCGGGGHHHHHHSTT--EEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred EecCCCCCCCHHHHHHHHHHCCC--CeEEEeCCCCCChhhhCHHHHHHHHH
Confidence 999999987 556677777764 89999999999999876665554443
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=235.92 Aligned_cols=263 Identities=11% Similarity=0.083 Sum_probs=166.1
Q ss_pred CcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC-CCCc
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DEPV 99 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-~~~~ 99 (299)
+..++..++.+++|...| ++|+|||+||++.++.. |.+ +.+.|++.|+||++|+||||+|+.+ .. ....
T Consensus 10 ~~~~~~~~g~~l~y~~~G--~g~~lvllHG~~~~~~~------w~~-~~~~L~~~~~via~Dl~G~G~S~~~-~~~~~~~ 79 (294)
T 1ehy_A 10 KHYEVQLPDVKIHYVREG--AGPTLLLLHGWPGFWWE------WSK-VIGPLAEHYDVIVPDLRGFGDSEKP-DLNDLSK 79 (294)
T ss_dssp CEEEEECSSCEEEEEEEE--CSSEEEEECCSSCCGGG------GHH-HHHHHHTTSEEEEECCTTSTTSCCC-CTTCGGG
T ss_pred ceeEEEECCEEEEEEEcC--CCCEEEEECCCCcchhh------HHH-HHHHHhhcCEEEecCCCCCCCCCCC-ccccccC
Confidence 445677888899999999 67899999999988754 744 4566777899999999999999753 10 0114
Q ss_pred ccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH---------HHHhh---h
Q 022316 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---------WLYNK---V 167 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------~~~~~---~ 167 (299)
++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|+++++........ |.... .
T Consensus 80 ~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
T 1ehy_A 80 YSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLD 159 (294)
T ss_dssp GCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCH
T ss_pred cCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcc
Confidence 89999999999999999999999999999999999999999999999999997432111110 10000 0
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhccc-ccchHHHHHhhcCC-CCh--hhhhccccc
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGR-PDI--SEGLRKLQC 243 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~--~~~~~~i~~ 243 (299)
+...+ ..+..... ......++....... ....++..+.+........ .............. ... ...+.+|++
T Consensus 160 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 236 (294)
T 1ehy_A 160 MAVEV-VGSSREVC-KKYFKHFFDHWSYRD-ELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDL 236 (294)
T ss_dssp HHHHH-HTSCHHHH-HHHHHHHHHHTSSSS-CCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCS
T ss_pred hhHHH-hccchhHH-HHHHHHHhhcccCCC-CCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCC
Confidence 00000 00111000 111111211111000 0112333333333322111 00111112221110 111 124568999
Q ss_pred cEEEEecCCCcchh---hhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 244 RSLIFVGESSPFHS---EAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 244 P~lii~G~~D~~~~---~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
|+|+|+|++|.++. ....+.+.+++ ++++++|++||.++.|-++.++..+.++
T Consensus 237 P~Lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~f 292 (294)
T 1ehy_A 237 PVTMIWGLGDTCVPYAPLIEFVPKYYSN--YTMETIEDCGHFLMVEKPEIAIDRIKTA 292 (294)
T ss_dssp CEEEEEECCSSCCTTHHHHHHHHHHBSS--EEEEEETTCCSCHHHHCHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCcchHHHHHHHHHHcCC--CceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 99999999999874 34556665654 8999999999999999888777666654
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=246.40 Aligned_cols=257 Identities=9% Similarity=0.010 Sum_probs=161.3
Q ss_pred CCCCcceeecCC----ceEEEEeccCCC-CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSH----GSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (299)
Q Consensus 18 ~~~~~~~i~~~~----~~l~~~~~g~~~-~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~ 92 (299)
.+.+.+++++++ .+++|...|+++ +|+|||+||++.++.. |.+.+..+...||+||++|+||||+|+.+
T Consensus 18 ~~~~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~------w~~~~~~L~~~g~rvia~Dl~G~G~S~~~ 91 (310)
T 1b6g_A 18 YPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYL------YRKMIPVFAESGARVIAPDFFGFGKSDKP 91 (310)
T ss_dssp CCCCCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGG------GTTTHHHHHHTTCEEEEECCTTSTTSCEE
T ss_pred CCCCceEEEecCCccceEEEEEEeCCCCCCCEEEEECCCCCchhh------HHHHHHHHHhCCCeEEEeCCCCCCCCCCC
Confidence 344566788888 899999999766 8999999999888744 76554443344799999999999999753
Q ss_pred CCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch--hHHHH------
Q 022316 93 ISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW--TEWLY------ 164 (299)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~------ 164 (299)
. ....++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++....... .....
T Consensus 92 ~--~~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~ 169 (310)
T 1b6g_A 92 V--DEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPA 169 (310)
T ss_dssp S--CGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSST
T ss_pred C--CcCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccc
Confidence 2 1235899999999999999999999999999999999999999999999999999985521000 00000
Q ss_pred --hhhhhhhHHhh-cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhccc-ccchHHHHHhhcCC--------C
Q 022316 165 --NKVMSNLLYYY-GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGR--------P 232 (299)
Q Consensus 165 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------~ 232 (299)
........... .... ........ ... .++..+.+...+.... ......+...+... .
T Consensus 170 ~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (310)
T 1b6g_A 170 DGFTAWKYDLVTPSDLRL---DQFMKRWA-PTL-------TEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDIST 238 (310)
T ss_dssp TTHHHHHHHHHSCSSCCH---HHHHHHHS-TTC-------CHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHH
T ss_pred hHHHHHHHHhccCchhhh---hhHHhhcC-CCC-------CHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhh
Confidence 00000000000 0000 00000000 000 1222222221111100 00111111111000 1
Q ss_pred Chhhhhc-cccccEEEEecCCCcch-hhhHHHhhhccccCceEEEE--cCchhhhHhHHHHHHHHhhh
Q 022316 233 DISEGLR-KLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEV--WTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 233 ~~~~~~~-~i~~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~~~~~--~~~~H~~~~~f~~~~~~~~~ 296 (299)
+..+.+. +|++|||+|+|++|.++ +..+.+.+.+++ ++++++ +++||.++. .++.++..+.
T Consensus 239 ~~~~~l~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~ip~--~~~~~i~~~~~GH~~~~-~p~~~~~~i~ 303 (310)
T 1b6g_A 239 EAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALIN--GCPEPLEIADAGHFVQE-FGEQVAREAL 303 (310)
T ss_dssp HHHHHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHST--TCCCCEEETTCCSCGGG-GHHHHHHHHH
T ss_pred hHhhhhhccccCceEEEeccCcchhhhHHHHHHHhccc--ccceeeecCCcccchhh-ChHHHHHHHH
Confidence 2335577 89999999999999987 556667777766 555555 999999987 6666654433
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=234.19 Aligned_cols=252 Identities=11% Similarity=0.068 Sum_probs=162.8
Q ss_pred cCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
.++.+++|...| ++++|||+||++.++.. |...+..+...||+|+++|+||||.|+.+. ..+++++++
T Consensus 14 ~~g~~l~y~~~G--~g~~vvllHG~~~~~~~------w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~~a 81 (281)
T 3fob_A 14 QAPIEIYYEDHG--TGKPVVLIHGWPLSGRS------WEYQVPALVEAGYRVITYDRRGFGKSSQPW----EGYEYDTFT 81 (281)
T ss_dssp TEEEEEEEEEES--SSEEEEEECCTTCCGGG------GTTTHHHHHHTTEEEEEECCTTSTTSCCCS----SCCSHHHHH
T ss_pred CCceEEEEEECC--CCCeEEEECCCCCcHHH------HHHHHHHHHhCCCEEEEeCCCCCCCCCCCc----cccCHHHHH
Confidence 345689999999 57889999999988755 766655555679999999999999996532 258999999
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCCCcc-----hh---HHHHhhhhhhhHHhhcc
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPS-----WT---EWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~ 177 (299)
+|+.++++.+++++++|+||||||.+++.+++++ |++|+++|++++.+.... .. .......+...... ..
T Consensus 82 ~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 160 (281)
T 3fob_A 82 SDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVIN-DR 160 (281)
T ss_dssp HHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhh-hH
Confidence 9999999999999999999999999888877765 899999999997542210 00 00000000000000 00
Q ss_pred hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-
Q 022316 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 256 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~- 256 (299)
.... ......++....... ...+........................+.. .+..+.+++|++|+|+|+|++|.++
T Consensus 161 ~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~l~~i~~P~Lii~G~~D~~~p 236 (281)
T 3fob_A 161 LAFL-DEFTKGFFAAGDRTD--LVSESFRLYNWDIAAGASPKGTLDCITAFSK-TDFRKDLEKFNIPTLIIHGDSDATVP 236 (281)
T ss_dssp HHHH-HHHHHHHTCBTTBCC--SSCHHHHHHHHHHHHTSCHHHHHHHHHHHHH-CCCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred HHHH-HHHHHHhcccccccc--cchHHHHHHhhhhhcccChHHHHHHHHHccc-cchhhhhhhcCCCEEEEecCCCCCcC
Confidence 0111 112223333221110 0122332222222222222233333333322 4667788999999999999999997
Q ss_pred -hhh-HHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 257 -SEA-VHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 257 -~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
+.. +.+.+.+++ +++++++++||.+..|.++.++.-+.+
T Consensus 237 ~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~~ 277 (281)
T 3fob_A 237 FEYSGKLTHEAIPN--SKVALIKGGPHGLNATHAKEFNEALLL 277 (281)
T ss_dssp GGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--ceEEEeCCCCCchhhhhHHHHHHHHHH
Confidence 333 455566655 899999999999998866666544443
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-36 Score=237.60 Aligned_cols=253 Identities=13% Similarity=0.170 Sum_probs=162.4
Q ss_pred cceeecC--C---ceEEEEeccCCCCCeEEEecccc---cchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 22 DNLIKTS--H---GSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 22 ~~~i~~~--~---~~l~~~~~g~~~~p~lvl~HG~~---~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
.++++++ + .+++|...| ++|+|||+||++ .+... |.+.+.+.|.++|+|+++|+||||+|+.+.
T Consensus 10 ~~~~~~~~~g~~~~~l~y~~~G--~g~~vvllHG~~~~~~~~~~------w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~ 81 (286)
T 2puj_A 10 SKFVKINEKGFSDFNIHYNEAG--NGETVIMLHGGGPGAGGWSN------YYRNVGPFVDAGYRVILKDSPGFNKSDAVV 81 (286)
T ss_dssp EEEEEECSTTCSSEEEEEEEEC--CSSEEEEECCCSTTCCHHHH------HTTTHHHHHHTTCEEEEECCTTSTTSCCCC
T ss_pred ceEEEecCCCcceEEEEEEecC--CCCcEEEECCCCCCCCcHHH------HHHHHHHHHhccCEEEEECCCCCCCCCCCC
Confidence 4567777 7 899999998 468999999997 44433 655541556677999999999999996532
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcc-hh--HHHHhhhhhh
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-WT--EWLYNKVMSN 170 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~--~~~~~~~~~~ 170 (299)
...++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++...... .. ..........
T Consensus 82 ---~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 158 (286)
T 2puj_A 82 ---MDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFK 158 (286)
T ss_dssp ---CSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHH
T ss_pred ---CcCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHH
Confidence 12489999999999999999999999999999999999999999999999999998764221 00 0000001111
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhc----CCCChhhhhccccccEE
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN----GRPDISEGLRKLQCRSL 246 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l 246 (299)
.... ...... ...+..++...... .++..+....... ..+.........+. ...+..+.+++|++|+|
T Consensus 159 ~~~~-~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~L 230 (286)
T 2puj_A 159 LYAE-PSYETL-KQMLQVFLYDQSLI-----TEELLQGRWEAIQ-RQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTF 230 (286)
T ss_dssp HHHS-CCHHHH-HHHHHHHCSCGGGC-----CHHHHHHHHHHHH-HCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEE
T ss_pred HhhC-CcHHHH-HHHHHHHhcCCccC-----CHHHHHHHHHHhh-cCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEE
Confidence 1000 001111 11222221111000 1222222111011 11111111111110 11234567889999999
Q ss_pred EEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 247 IFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 247 ii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
+|+|++|.++ +.++.+.+.+++ +++++++++||.++.|..+.++..+
T Consensus 231 ii~G~~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i 279 (286)
T 2puj_A 231 ITWGRDDRFVPLDHGLKLLWNIDD--ARLHVFSKCGAWAQWEHADEFNRLV 279 (286)
T ss_dssp EEEETTCSSSCTHHHHHHHHHSSS--EEEEEESSCCSCHHHHTHHHHHHHH
T ss_pred EEEECCCCccCHHHHHHHHHHCCC--CeEEEeCCCCCCccccCHHHHHHHH
Confidence 9999999997 567777777765 8999999999999987665554433
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=233.61 Aligned_cols=250 Identities=14% Similarity=0.156 Sum_probs=160.6
Q ss_pred CCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHH
Q 022316 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (299)
Q Consensus 28 ~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (299)
.+.+++|...| ++++|||+||++.+... |.+. .+.|.++|+|+++|+||||.|..+.. ..++++++++
T Consensus 4 ~~~~~~y~~~G--~g~~vvllHG~~~~~~~------~~~~-~~~L~~~~~vi~~Dl~G~G~S~~~~~---~~~~~~~~~~ 71 (269)
T 2xmz_A 4 THYKFYEANVE--TNQVLVFLHGFLSDSRT------YHNH-IEKFTDNYHVITIDLPGHGEDQSSMD---ETWNFDYITT 71 (269)
T ss_dssp CSEEEECCSSC--CSEEEEEECCTTCCGGG------GTTT-HHHHHTTSEEEEECCTTSTTCCCCTT---SCCCHHHHHH
T ss_pred ccceEEEEEcC--CCCeEEEEcCCCCcHHH------HHHH-HHHHhhcCeEEEecCCCCCCCCCCCC---CccCHHHHHH
Confidence 35578888888 45689999999988754 7554 56667779999999999999965321 1479999999
Q ss_pred HHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhh----hhhhhHHhhcchhHHHH
Q 022316 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK----VMSNLLYYYGMCGVVKE 183 (299)
Q Consensus 108 ~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 183 (299)
|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.+............ .....+..... .
T Consensus 72 dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 146 (269)
T 2xmz_A 72 LLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGI-----E 146 (269)
T ss_dssp HHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCH-----H
T ss_pred HHHHHHHHcCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccH-----H
Confidence 99999999999999999999999999999999999999999999876543322211100 00000000011 1
Q ss_pred HHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhc--CCCChhhhhccccccEEEEecCCCcch-hhhH
Q 022316 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFH-SEAV 260 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~lii~G~~D~~~-~~~~ 260 (299)
.....+............+++..+.+...........+...+..+. ...+..+.+.+|++|+|+|+|++|.++ ....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 226 (269)
T 2xmz_A 147 LFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAK 226 (269)
T ss_dssp HHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHH
T ss_pred HHHHHHHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHH
Confidence 1122222111000000001222222222221222222222222221 223456678899999999999999987 3334
Q ss_pred HHhhhccccCceEEEEcCchhhhHhHHHHHH----HHhhh
Q 022316 261 HMTSKIDRRYSALVEVWTRVYISLLGFLVLL----ASFCE 296 (299)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~----~~~~~ 296 (299)
++.+.+++ +++++++++||.++.|-.+.+ ..|++
T Consensus 227 ~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 264 (269)
T 2xmz_A 227 KMANLIPN--SKCKLISATGHTIHVEDSDEFDTMILGFLK 264 (269)
T ss_dssp HHHHHSTT--EEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHHhhCCC--cEEEEeCCCCCChhhcCHHHHHHHHHHHHH
Confidence 46666654 899999999999998755544 45554
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=233.63 Aligned_cols=251 Identities=11% Similarity=0.072 Sum_probs=162.0
Q ss_pred cCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
.++.+++|...| ++++|||+||++.+... |.+.+..+..+||+|+++|+||||+|+.+. ..+++++++
T Consensus 10 ~~g~~l~y~~~g--~g~pvvllHG~~~~~~~------~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~~a 77 (277)
T 1brt_A 10 STSIDLYYEDHG--TGQPVVLIHGFPLSGHS------WERQSAALLDAGYRVITYDRRGFGQSSQPT----TGYDYDTFA 77 (277)
T ss_dssp TEEEEEEEEEEC--SSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCCS----SCCSHHHHH
T ss_pred CCCcEEEEEEcC--CCCeEEEECCCCCcHHH------HHHHHHHHhhCCCEEEEeCCCCCCCCCCCC----CCccHHHHH
Confidence 355689999988 56789999999988744 745544443458999999999999996432 358999999
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC-cccEEEEecCCCCCcch--h------HHHHhhhhhhhHHhhcc
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKAPSW--T------EWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~ 177 (299)
+|+.++++++++++++|+||||||.+++.+|.++|+ +|+++|++++....... . .......+...+.. ..
T Consensus 78 ~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 156 (277)
T 1brt_A 78 ADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKA-DR 156 (277)
T ss_dssp HHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHH-CH
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhc-Cc
Confidence 999999999999999999999999999999999999 99999999975432100 0 00000000000000 00
Q ss_pred hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-
Q 022316 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 256 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~- 256 (299)
.... ......++....... ....++..+.+..................+ ..+..+.+++|++|+|+|+|++|.++
T Consensus 157 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~~ 232 (277)
T 1brt_A 157 YAFY-TGFFNDFYNLDENLG-TRISEEAVRNSWNTAASGGFFAAAAAPTTW--YTDFRADIPRIDVPALILHGTGDRTLP 232 (277)
T ss_dssp HHHH-HHHHHHHTTHHHHBT-TTBCHHHHHHHHHHHHHSCHHHHHHGGGGT--TCCCTTTGGGCCSCEEEEEETTCSSSC
T ss_pred hhhH-HHHHHHHhhcccccc-ccCCHHHHHHHHHHHhccchHHHHHHHHHH--hccchhhcccCCCCeEEEecCCCccCC
Confidence 0111 111222222110000 000233333333322222222222222223 24556678899999999999999987
Q ss_pred -hhh-HHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 257 -SEA-VHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 257 -~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
+.. +.+.+.+++ ++++++|++||.++.|-.+.++.-+.
T Consensus 233 ~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~ 272 (277)
T 1brt_A 233 IENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALL 272 (277)
T ss_dssp GGGTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHH
T ss_pred hHHHHHHHHHHCCC--CcEEEeCCCCcchhhhCHHHHHHHHH
Confidence 445 677777764 88999999999999876665554333
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=234.43 Aligned_cols=250 Identities=13% Similarity=0.129 Sum_probs=157.8
Q ss_pred cCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
.++.+|+|...|++++|+|||+||++.++.. |.+.+..+...||+|+++|+||||+|..+ ...+++++++
T Consensus 7 ~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~------w~~~~~~L~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~~ 76 (276)
T 1zoi_A 7 KDGVQIFYKDWGPRDAPVIHFHHGWPLSADD------WDAQLLFFLAHGYRVVAHDRRGHGRSSQV----WDGHDMDHYA 76 (276)
T ss_dssp TTSCEEEEEEESCTTSCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHHH
T ss_pred CCCcEEEEEecCCCCCCeEEEECCCCcchhH------HHHHHHHHHhCCCEEEEecCCCCCCCCCC----CCCCCHHHHH
Confidence 3566899999997678899999999888744 75554444456899999999999999643 1248999999
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCCCcc----h----hHHHHhhhhhhhHHhhcc
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPS----W----TEWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~ 177 (299)
+|+.++++++++++++|+||||||.+++.+|+++ |++|+++|++++.+.... . ..... ..+...... ..
T Consensus 77 ~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 154 (276)
T 1zoi_A 77 DDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVF-DGFQAQVAS-NR 154 (276)
T ss_dssp HHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHH-HHHHHHHHH-CH
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHH-HHHHHHHHH-hH
Confidence 9999999999999999999999999999988887 999999999997543210 0 00000 000000000 00
Q ss_pred hhHHHHHHHH-hhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch
Q 022316 178 CGVVKELLLK-RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (299)
Q Consensus 178 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~ 256 (299)
.... ..... .++....... ...++..+.+..................+.. .+..+.+++|++|+|+|+|++|.++
T Consensus 155 ~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~l~i~G~~D~~~ 230 (276)
T 1zoi_A 155 AQFY-RDVPAGPFYGYNRPGV--EASEGIIGNWWRQGMIGSAKAHYDGIVAFSQ-TDFTEDLKGIQQPVLVMHGDDDQIV 230 (276)
T ss_dssp HHHH-HHHHHTTTTTTTSTTC--CCCHHHHHHHHHHHHHSCHHHHHHHHHHHHS-CCCHHHHHHCCSCEEEEEETTCSSS
T ss_pred HHHH-HHhhhccccccccccc--cccHHHHHHHHhhhhhhhHHHHHHHHHHhcc-cchhhhccccCCCEEEEEcCCCccc
Confidence 0111 11111 1111110000 0022333322221111111112222222222 4566778899999999999999987
Q ss_pred --h-hhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHh
Q 022316 257 --S-EAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASF 294 (299)
Q Consensus 257 --~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~ 294 (299)
+ ..+.+.+.+++ ++++++|++||.++.|-.+.++.-
T Consensus 231 ~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~ 269 (276)
T 1zoi_A 231 PYENSGVLSAKLLPN--GALKTYKGYPHGMPTTHADVINAD 269 (276)
T ss_dssp CSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHTHHHHHHH
T ss_pred ChHHHHHHHHhhCCC--ceEEEcCCCCCchhhhCHHHHHHH
Confidence 3 23344455543 899999999999988755555433
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=233.85 Aligned_cols=249 Identities=12% Similarity=0.027 Sum_probs=157.4
Q ss_pred ceeecCCceEEEEec--cCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 23 NLIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~--g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
..++.++.+++|... | +++|+|||+||++.++.. |.+ +.+.|+++|+||++|+||||+|+.+. ..+
T Consensus 7 ~~~~~~g~~l~y~~~~~G-~~~p~vvllHG~~~~~~~------w~~-~~~~L~~~~rvia~DlrGhG~S~~~~----~~~ 74 (276)
T 2wj6_A 7 HETLVFDNKLSYIDNQRD-TDGPAILLLPGWCHDHRV------YKY-LIQELDADFRVIVPNWRGHGLSPSEV----PDF 74 (276)
T ss_dssp EEEEETTEEEEEEECCCC-CSSCEEEEECCTTCCGGG------GHH-HHHHHTTTSCEEEECCTTCSSSCCCC----CCC
T ss_pred eEEeeCCeEEEEEEecCC-CCCCeEEEECCCCCcHHH------HHH-HHHHHhcCCEEEEeCCCCCCCCCCCC----CCC
Confidence 356778889999998 7 455889999999988855 744 45667889999999999999996531 358
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchh
Q 022316 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
+++++++|+.++++++++++++|+||||||.+|+.+|.++ |++|+++|++++........... .............
T Consensus 75 ~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 151 (276)
T 2wj6_A 75 GYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAK---SLTLLKDPERWRE 151 (276)
T ss_dssp CHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHH---HHHHHHCTTTHHH
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHH---HhhhccCcchHHH
Confidence 9999999999999999999999999999999999999999 99999999999764322211110 0000000000000
Q ss_pred HHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHh----hcCCCChhhhhccccccEEEEecCCCcc
Q 022316 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA----INGRPDISEGLRKLQCRSLIFVGESSPF 255 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~P~lii~G~~D~~ 255 (299)
.. ......++.... .+...+.+...........+...... +....+....+.+|++|+++++|..|..
T Consensus 152 ~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~ 223 (276)
T 2wj6_A 152 GT-HGLFDVWLDGHD-------EKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPT 223 (276)
T ss_dssp HH-HHHHHHHHTTBC-------CHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSC
T ss_pred HH-HHHHHHhhcccc-------hHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCcc
Confidence 00 112222221110 12222222221111111111111100 0000123346788999999987643322
Q ss_pred -h---hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 256 -H---SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 256 -~---~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
. .....+.+.+++ ++++++|++||.+..|.++.++..+.
T Consensus 224 ~~~~~~~~~~~~~~~p~--a~~~~i~~~gH~~~~e~P~~~~~~i~ 266 (276)
T 2wj6_A 224 EPEYEKINSDFAEQHPW--FSYAKLGGPTHFPAIDVPDRAAVHIR 266 (276)
T ss_dssp SHHHHHHHHHHHHHCTT--EEEEECCCSSSCHHHHSHHHHHHHHH
T ss_pred chhHHHHHHHHHhhCCC--eEEEEeCCCCCcccccCHHHHHHHHH
Confidence 1 334556666654 89999999999999886666554433
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=232.24 Aligned_cols=251 Identities=11% Similarity=0.091 Sum_probs=157.7
Q ss_pred eeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHH
Q 022316 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 103 (299)
++..++.+|+|...| ++++|||+||++.++.. |...+..+..+||+|+++|+||||.|+.+. ..++++
T Consensus 3 ~~~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~------w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~~~~ 70 (271)
T 3ia2_A 3 FVAKDGTQIYFKDWG--SGKPVLFSHGWLLDADM------WEYQMEYLSSRGYRTIAFDRRGFGRSDQPW----TGNDYD 70 (271)
T ss_dssp EECTTSCEEEEEEES--SSSEEEEECCTTCCGGG------GHHHHHHHHTTTCEEEEECCTTSTTSCCCS----SCCSHH
T ss_pred EEcCCCCEEEEEccC--CCCeEEEECCCCCcHHH------HHHHHHHHHhCCceEEEecCCCCccCCCCC----CCCCHH
Confidence 344567799999999 57889999999988744 755554555679999999999999996532 247899
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCCCcch---------hHHHHhhhhhhhHH
Q 022316 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSW---------TEWLYNKVMSNLLY 173 (299)
Q Consensus 104 ~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~~~~~---------~~~~~~~~~~~~~~ 173 (299)
++++|+.++++.++.++++|+||||||.+++.+++++ |++|+++|++++....... .... ........
T Consensus 71 ~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 148 (271)
T 3ia2_A 71 TFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVF--ARFKTELL 148 (271)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHH--HHHHHHHH
Confidence 9999999999999999999999999999777776665 8999999999975432100 0000 00000000
Q ss_pred hhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCC
Q 022316 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (299)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D 253 (299)
. ...... ......++....... ..+........................+.. .+....+.+|++|+|+|+|++|
T Consensus 149 ~-~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~Lvi~G~~D 222 (271)
T 3ia2_A 149 K-DRAQFI-SDFNAPFYGINKGQV---VSQGVQTQTLQIALLASLKATVDCVTAFAE-TDFRPDMAKIDVPTLVIHGDGD 222 (271)
T ss_dssp H-HHHHHH-HHHHHHHHTGGGTCC---CCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CBCHHHHTTCCSCEEEEEETTC
T ss_pred h-hHHHHH-HHhhHhhhccccccc---cCHHHHHHHHhhhhhccHHHHHHHHHHhhc-cCCcccccCCCCCEEEEEeCCC
Confidence 0 000001 001111111111000 012222222211111111222222222222 4566778999999999999999
Q ss_pred cch--hhhHHH-hhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 254 PFH--SEAVHM-TSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 254 ~~~--~~~~~~-~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.++ +...+. .+.+++ ++++++|++||.+..|-.+.++.-+.
T Consensus 223 ~~~p~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~ 266 (271)
T 3ia2_A 223 QIVPFETTGKVAAELIKG--AELKVYKDAPHGFAVTHAQQLNEDLL 266 (271)
T ss_dssp SSSCGGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHH
T ss_pred CcCChHHHHHHHHHhCCC--ceEEEEcCCCCcccccCHHHHHHHHH
Confidence 997 333343 444544 89999999999999876666554443
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-35 Score=230.65 Aligned_cols=257 Identities=12% Similarity=0.144 Sum_probs=173.1
Q ss_pred CcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
+++++++++++++|...| ++|+|||+||++.+... |... .+.|.++|+|+++|+||||.|..+. ....+
T Consensus 4 ~~~~~~~~~~~~~y~~~g--~~~~vv~~HG~~~~~~~------~~~~-~~~L~~~~~vi~~d~~G~G~s~~~~--~~~~~ 72 (278)
T 3oos_A 4 TTNIIKTPRGKFEYFLKG--EGPPLCVTHLYSEYNDN------GNTF-ANPFTDHYSVYLVNLKGCGNSDSAK--NDSEY 72 (278)
T ss_dssp EEEEEEETTEEEEEEEEC--SSSEEEECCSSEECCTT------CCTT-TGGGGGTSEEEEECCTTSTTSCCCS--SGGGG
T ss_pred ccCcEecCCceEEEEecC--CCCeEEEEcCCCcchHH------HHHH-HHHhhcCceEEEEcCCCCCCCCCCC--CcccC
Confidence 457889999999999998 67899999999887744 5343 5667779999999999999996532 23457
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh-----------HHHHhhhhh
Q 022316 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT-----------EWLYNKVMS 169 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~-----------~~~~~~~~~ 169 (299)
+++++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++........ .........
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (278)
T 3oos_A 73 SMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIM 152 (278)
T ss_dssp SHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987621100 000000000
Q ss_pred hhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhccc-cc---chHHHHH-hhcCCCChhhhhcccccc
Q 022316 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SS---NVWHFLE-AINGRPDISEGLRKLQCR 244 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~-~~~~~~~~~~~~~~i~~P 244 (299)
..+................+...... .++... ..+.... .. .....+. ......+....+.++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 223 (278)
T 3oos_A 153 NALNDDSTVQEERKALSREWALMSFY------SEEKLE---EALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIP 223 (278)
T ss_dssp HHHTCTTSCHHHHHHHHHHHHHHHCS------CHHHHH---HHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSC
T ss_pred HhhcccccCchHHHHHHHHHhhcccC------CcHHHH---HHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCC
Confidence 00000011111101111111111100 121111 1111111 11 1111111 111224566778899999
Q ss_pred EEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhcC
Q 022316 245 SLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESEF 299 (299)
Q Consensus 245 ~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~~ 299 (299)
+++|+|++|.++ +....+.+.+++ +++++++++||..+.+..+.++..+.+++
T Consensus 224 ~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 224 SFIYCGKHDVQCPYIFSCEIANLIPN--ATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHSTT--EEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred EEEEEeccCCCCCHHHHHHHHhhCCC--cEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 999999999987 567777777754 89999999999999999988888887664
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=231.55 Aligned_cols=242 Identities=15% Similarity=0.140 Sum_probs=155.8
Q ss_pred EEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHH
Q 022316 33 SVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV 112 (299)
Q Consensus 33 ~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~ 112 (299)
+|...|+ ++|+|||+||++.++.. |.+. .+.|.++|+|+++|+||||.|+.+.......++++++++|+.++
T Consensus 12 ~~~~~G~-g~~~vvllHG~~~~~~~------w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~ 83 (271)
T 1wom_A 12 HVKVKGS-GKASIMFAPGFGCDQSV------WNAV-APAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDV 83 (271)
T ss_dssp TCEEEEC-CSSEEEEECCTTCCGGG------GTTT-GGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHH
T ss_pred eeEeecC-CCCcEEEEcCCCCchhh------HHHH-HHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHH
Confidence 4666673 45789999999888744 7444 56677789999999999999965321112346899999999999
Q ss_pred HHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh-HH---HHhhhhhhhHHh--hcchhHHHHHHH
Q 022316 113 LNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT-EW---LYNKVMSNLLYY--YGMCGVVKELLL 186 (299)
Q Consensus 113 l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~---~~~~~~~~~~~~--~~~~~~~~~~~~ 186 (299)
++.+++++++|+||||||.+|+.+|.++|++|+++|++++.+...... .+ .........+.. ....... ....
T Consensus 84 l~~l~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 162 (271)
T 1wom_A 84 CEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWA-TVFA 162 (271)
T ss_dssp HHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHH-HHHH
T ss_pred HHHcCCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHH-HHHH
Confidence 999999999999999999999999999999999999999865321110 00 000000000000 0000000 0011
Q ss_pred HhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhh
Q 022316 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 264 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~ 264 (299)
...+.... .++..+.+...+....+............ .+....+.++++|+|+|+|++|.++ +..+.+.+
T Consensus 163 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~ 234 (271)
T 1wom_A 163 ATVLNQPD-------RPEIKEELESRFCSTDPVIARQFAKAAFF-SDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQ 234 (271)
T ss_dssp HHHHCCTT-------CHHHHHHHHHHHHHSCHHHHHHHHHHHHS-CCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHH
T ss_pred HHHhcCCC-------chHHHHHHHHHHhcCCcHHHHHHHHHHhC-cchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHH
Confidence 11111100 23344444433332222222222222222 3556678899999999999999987 55666777
Q ss_pred hccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 265 KIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 265 ~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
.+++ +++++++++||.++.|-++.++.
T Consensus 235 ~~~~--~~~~~i~~~gH~~~~e~p~~~~~ 261 (271)
T 1wom_A 235 HLPY--SSLKQMEARGHCPHMSHPDETIQ 261 (271)
T ss_dssp HSSS--EEEEEEEEESSCHHHHCHHHHHH
T ss_pred HCCC--CEEEEeCCCCcCccccCHHHHHH
Confidence 7764 88999999999998875555443
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=231.15 Aligned_cols=251 Identities=12% Similarity=0.104 Sum_probs=156.7
Q ss_pred cCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
.++.+++|...|++++|+|||+||++.++.. |.+.+..+..+||+|+++|+||||.|..+. ..+++++++
T Consensus 6 ~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~------w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~~~ 75 (275)
T 1a88_A 6 SDGTNIFYKDWGPRDGLPVVFHHGWPLSADD------WDNQMLFFLSHGYRVIAHDRRGHGRSDQPS----TGHDMDTYA 75 (275)
T ss_dssp TTSCEEEEEEESCTTSCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCCS----SCCSHHHHH
T ss_pred cCCCEEEEEEcCCCCCceEEEECCCCCchhh------HHHHHHHHHHCCceEEEEcCCcCCCCCCCC----CCCCHHHHH
Confidence 3566899999997778899999999888744 755544444568999999999999996432 248999999
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCCCcch--------hHHHHhhhhhhhHHhhcc
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSW--------TEWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 177 (299)
+|+.++++++++++++|+||||||.+++.+|+++ |++|+++|++++.+..... ..... ..+...... ..
T Consensus 76 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 153 (275)
T 1a88_A 76 ADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVF-DEFRAALAA-NR 153 (275)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHH-HHHHHHHHH-CH
T ss_pred HHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHH-HHHHHHHhh-hH
Confidence 9999999999999999999999999999988887 9999999999975432110 00000 000000000 00
Q ss_pred hhHHHHHHHH-hhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch
Q 022316 178 CGVVKELLLK-RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (299)
Q Consensus 178 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~ 256 (299)
.... ..... .++....... ...++..+.+..................+.. .+....+.+|++|+|+|+|++|.++
T Consensus 154 ~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~ 229 (275)
T 1a88_A 154 AQFY-IDVPSGPFYGFNREGA--TVSQGLIDHWWLQGMMGAANAHYECIAAFSE-TDFTDDLKRIDVPVLVAHGTDDQVV 229 (275)
T ss_dssp HHHH-HHHHHTTTTTTTSTTC--CCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHHCCSCEEEEEETTCSSS
T ss_pred HHHH-HhhhccccccccCccc--ccCHHHHHHHHHHhhhcchHhHHHHHhhhhh-cccccccccCCCCEEEEecCCCccC
Confidence 0111 00111 1111110000 0122333322221111111111111222211 3456678899999999999999987
Q ss_pred --hhh-HHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 257 --SEA-VHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 257 --~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
+.. ..+.+.+++ +++++++++||.++.|-.+.++.-+
T Consensus 230 ~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i 269 (275)
T 1a88_A 230 PYADAAPKSAELLAN--ATLKSYEGLPHGMLSTHPEVLNPDL 269 (275)
T ss_dssp CSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHCHHHHHHHH
T ss_pred CcHHHHHHHHhhCCC--cEEEEcCCCCccHHHhCHHHHHHHH
Confidence 323 334455543 8999999999999887665554433
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=228.48 Aligned_cols=250 Identities=11% Similarity=0.068 Sum_probs=174.8
Q ss_pred eeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHH
Q 022316 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 103 (299)
++++++.+++|...|++++|+|||+||++.+... |.+. .+.|.++|+|+++|+||||.|..+ ...++++
T Consensus 3 ~~~~~g~~l~~~~~g~~~~~~vv~lHG~~~~~~~------~~~~-~~~L~~~~~v~~~D~~G~G~S~~~----~~~~~~~ 71 (264)
T 3ibt_A 3 SLNVNGTLMTYSESGDPHAPTLFLLSGWCQDHRL------FKNL-APLLARDFHVICPDWRGHDAKQTD----SGDFDSQ 71 (264)
T ss_dssp CCEETTEECCEEEESCSSSCEEEEECCTTCCGGG------GTTH-HHHHTTTSEEEEECCTTCSTTCCC----CSCCCHH
T ss_pred eEeeCCeEEEEEEeCCCCCCeEEEEcCCCCcHhH------HHHH-HHHHHhcCcEEEEccccCCCCCCC----ccccCHH
Confidence 4667888999999997778999999999988744 6444 566777899999999999999753 2358999
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHH
Q 022316 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (299)
Q Consensus 104 ~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
++++|+.++++.++.++++|+||||||.+++.+|.++ |++|+++|++++.. ......+.. +.............
T Consensus 72 ~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~- 146 (264)
T 3ibt_A 72 TLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-QPHPGFWQQ---LAEGQHPTEYVAGR- 146 (264)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-SCCHHHHHH---HHHTTCTTTHHHHH-
T ss_pred HHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-CcChhhcch---hhcccChhhHHHHH-
Confidence 9999999999999999999999999999999999999 99999999999988 322211111 11110111111111
Q ss_pred HHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcC----CCChhhhhccccccEEEEecC--CCcch
Q 022316 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING----RPDISEGLRKLQCRSLIFVGE--SSPFH 256 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~P~lii~G~--~D~~~ 256 (299)
......++.... .++..+.+...+.......+......+.. ..+....+.+|++|+++|+|. .|...
T Consensus 147 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~ 219 (264)
T 3ibt_A 147 QSFFDEWAETTD-------NADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQD 219 (264)
T ss_dssp HHHHHHHHTTCC-------CHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHH
T ss_pred HHHHHHhcccCC-------cHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchh
Confidence 223444444331 36666666665554443333333332211 123346788999999999654 34333
Q ss_pred --hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 257 --SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+..+.+.+.+++ +++++++++||.++.|.++.++..+.++
T Consensus 220 ~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~f 261 (264)
T 3ibt_A 220 YRQLQLEFAAGHSW--FHPRHIPGRTHFPSLENPVAVAQAIREF 261 (264)
T ss_dssp HHHHHHHHHHHCTT--EEEEECCCSSSCHHHHCHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCC--ceEEEcCCCCCcchhhCHHHHHHHHHHH
Confidence 445666666654 8899999999999998777666555543
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=229.94 Aligned_cols=254 Identities=13% Similarity=0.057 Sum_probs=162.8
Q ss_pred CCCCcceeecCCceEEEEeccCCCCCeEEEecccc---cchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (299)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~---~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~ 94 (299)
.+.+.++++.++.+++|...| ++|+|||+||++ .+... |.+. ...|.++|+|+++|+||||.|. +.
T Consensus 14 ~~~~~~~~~~~g~~l~y~~~g--~g~~vvllHG~~~~~~~~~~------~~~~-~~~L~~~~~vi~~Dl~G~G~S~-~~- 82 (296)
T 1j1i_A 14 RAYVERFVNAGGVETRYLEAG--KGQPVILIHGGGAGAESEGN------WRNV-IPILARHYRVIAMDMLGFGKTA-KP- 82 (296)
T ss_dssp -CCEEEEEEETTEEEEEEEEC--CSSEEEEECCCSTTCCHHHH------HTTT-HHHHTTTSEEEEECCTTSTTSC-CC-
T ss_pred cCCcceEEEECCEEEEEEecC--CCCeEEEECCCCCCcchHHH------HHHH-HHHHhhcCEEEEECCCCCCCCC-CC-
Confidence 345567788888999999998 468999999987 44322 6444 5566777999999999999996 22
Q ss_pred CCCCcccHHHHHHHHHHHHHhcCC-CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHH
Q 022316 95 DDEPVLSVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (299)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (299)
...++++++++++.++++.+++ ++++|+||||||.+|+.+|.++|++|+++|++++........... .. ...
T Consensus 83 --~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~--~~---~~~ 155 (296)
T 1j1i_A 83 --DIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDL--RP---IIN 155 (296)
T ss_dssp --SSCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC---------------
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchH--HH---Hhc
Confidence 1248999999999999999999 899999999999999999999999999999999876432211100 00 000
Q ss_pred hhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhh-cccccchHHHHHhh---cCCCChhhhhccccccEEEEe
Q 022316 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLD-ERQSSNVWHFLEAI---NGRPDISEGLRKLQCRSLIFV 249 (299)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~P~lii~ 249 (299)
........ ......++..... ..++.......... ......+....... ....+....+.+|++|+|+|+
T Consensus 156 ~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~ 229 (296)
T 1j1i_A 156 YDFTREGM-VHLVKALTNDGFK-----IDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQ 229 (296)
T ss_dssp CCSCHHHH-HHHHHHHSCTTCC-----CCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEE
T ss_pred ccCCchHH-HHHHHHhccCccc-----ccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEE
Confidence 00000111 1112222111100 01222221111110 00011111111111 111234456788999999999
Q ss_pred cCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHH----HHHhhhh
Q 022316 250 GESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVL----LASFCES 297 (299)
Q Consensus 250 G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~----~~~~~~~ 297 (299)
|++|.++ +....+.+.+++ +++++++++||.++.|.++. +..|+++
T Consensus 230 G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 281 (296)
T 1j1i_A 230 GKDDKVVPVETAYKFLDLIDD--SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 281 (296)
T ss_dssp ETTCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred ECCCcccCHHHHHHHHHHCCC--CEEEEECCCCCCchhcCHHHHHHHHHHHHhc
Confidence 9999997 566777777754 88999999999998875554 4456554
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=228.82 Aligned_cols=262 Identities=27% Similarity=0.453 Sum_probs=171.5
Q ss_pred ceeecCCceEEEEeccCC--CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 23 NLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~--~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
+..+.++.+++|...|++ ++|+|||+||++.+....+... |...+.+.+.++|+|+++|+||||.|....+.....+
T Consensus 14 ~~~~~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~~~ 92 (286)
T 2qmq_A 14 HSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPL-FRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYP 92 (286)
T ss_dssp EEEEETTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHH-HTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCCCC
T ss_pred cccccCCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhh-hhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCCcc
Confidence 466778899999999975 5799999999998875322211 2111456677789999999999998865433222225
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhH
Q 022316 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (299)
+++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.........+..... .......
T Consensus 93 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~~~~ 166 (286)
T 2qmq_A 93 SLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKL------TGLTSSI 166 (286)
T ss_dssp CHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHH------HHTTSCH
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhh------ccccccc
Confidence 9999999999999999999999999999999999999999999999999999776554433321110 0111111
Q ss_pred HHHHHHHhhhccccccCCCCCchHHHHHHHHhhhccc-cc---chHHHHHhhcCCCChhhhhccccccEEEEecCCCcch
Q 022316 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SS---NVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~ 256 (299)
. ......++....... .++..+.+........ .. .+...+............+.++++|+|+|+|++|.++
T Consensus 167 ~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 241 (286)
T 2qmq_A 167 P-DMILGHLFSQEELSG----NSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHE 241 (286)
T ss_dssp H-HHHHHHHSCHHHHHT----TCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTH
T ss_pred h-HHHHHHHhcCCCCCc----chHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCccc
Confidence 1 223333443332211 2344444444333221 11 1222222222211123567899999999999999998
Q ss_pred hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 257 SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
....+........++++++++++||.++.+-.+.++..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 281 (286)
T 2qmq_A 242 DAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFK 281 (286)
T ss_dssp HHHHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHH
T ss_pred cHHHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHH
Confidence 4333333333222489999999999998876555544433
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=227.77 Aligned_cols=249 Identities=14% Similarity=0.112 Sum_probs=153.6
Q ss_pred cCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
.++.+++|...| ++|+|||+||++.++.. |.+.+..+..+||+|+++|+||||+|..+. ..+++++++
T Consensus 6 ~~g~~l~y~~~g--~~~~vvllHG~~~~~~~------~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~~~ 73 (273)
T 1a8s_A 6 RDGTQIYYKDWG--SGQPIVFSHGWPLNADS------WESQMIFLAAQGYRVIAHDRRGHGRSSQPW----SGNDMDTYA 73 (273)
T ss_dssp TTSCEEEEEEES--CSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCCS----SCCSHHHHH
T ss_pred CCCcEEEEEEcC--CCCEEEEECCCCCcHHH------HhhHHhhHhhCCcEEEEECCCCCCCCCCCC----CCCCHHHHH
Confidence 355689999988 57899999999888744 755544444568999999999999996432 248999999
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCCCcch----h---HHHHhhhhhhhHHhhcch
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSW----T---EWLYNKVMSNLLYYYGMC 178 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~ 178 (299)
+|+.+++++++.++++|+||||||.+++.+|+++ |++|+++|++++....... . .......+...... ...
T Consensus 74 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 152 (273)
T 1a8s_A 74 DDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLA-DRS 152 (273)
T ss_dssp HHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHh-hHH
Confidence 9999999999999999999999999999988887 9999999999975432100 0 00000000000000 000
Q ss_pred hHHHHHHHH-hhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-
Q 022316 179 GVVKELLLK-RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 256 (299)
Q Consensus 179 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~- 256 (299)
... ..... .++....... ...++..+.+..................+.. .+..+.+.+|++|+|+|+|++|.++
T Consensus 153 ~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~~ 228 (273)
T 1a8s_A 153 QLY-KDLASGPFFGFNQPGA--KSSAGMVDWFWLQGMAAGHKNAYDCIKAFSE-TDFTEDLKKIDVPTLVVHGDADQVVP 228 (273)
T ss_dssp HHH-HHHHHTTSSSTTSTTC--CCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHTCCSCEEEEEETTCSSSC
T ss_pred HHH-HHhhcccccCcCCccc--ccCHHHHHHHHHhccccchhHHHHHHHHHhc-cChhhhhhcCCCCEEEEECCCCccCC
Confidence 001 00111 1111110000 0112333222221111111111112222211 3456678899999999999999987
Q ss_pred -hhh-HHHhhhccccCceEEEEcCchhhhHhHHHHHHHHh
Q 022316 257 -SEA-VHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASF 294 (299)
Q Consensus 257 -~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~ 294 (299)
+.. ..+.+.+++ +++++++++||.++.+-.+.++.-
T Consensus 229 ~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~ 266 (273)
T 1a8s_A 229 IEASGIASAALVKG--STLKIYSGAPHGLTDTHKDQLNAD 266 (273)
T ss_dssp STTTHHHHHHHSTT--CEEEEETTCCSCHHHHTHHHHHHH
T ss_pred hHHHHHHHHHhCCC--cEEEEeCCCCCcchhhCHHHHHHH
Confidence 323 344455543 889999999999988765555433
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=228.72 Aligned_cols=266 Identities=12% Similarity=0.071 Sum_probs=175.4
Q ss_pred CCCCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC
Q 022316 16 PPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (299)
Q Consensus 16 ~~~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~ 95 (299)
...+.+.+++++++.+++|...|++++|+|||+||++.+... |... ...+.+||+|+++|+||||.|..+..
T Consensus 6 ~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~lHG~~~~~~~------~~~~-~~~l~~~~~v~~~d~~G~G~s~~~~~- 77 (299)
T 3g9x_A 6 TGFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYL------WRNI-IPHVAPSHRCIAPDLIGMGKSDKPDL- 77 (299)
T ss_dssp CCCCCCCEEEEETTEEEEEEEESCSSSCCEEEECCTTCCGGG------GTTT-HHHHTTTSCEEEECCTTSTTSCCCCC-
T ss_pred CCcccceeeeeeCCeEEEEEecCCCCCCEEEEECCCCccHHH------HHHH-HHHHccCCEEEeeCCCCCCCCCCCCC-
Confidence 345677789999999999999998778999999999888744 6444 55667899999999999999965322
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhh-hhhhhHHh
Q 022316 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK-VMSNLLYY 174 (299)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~ 174 (299)
.++++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++......+..+.... .....+..
T Consensus 78 ---~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (299)
T 3g9x_A 78 ---DYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRT 154 (299)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTS
T ss_pred ---cccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcC
Confidence 58999999999999999999999999999999999999999999999999999655443222111000 00000000
Q ss_pred hcchhHHH---HHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhcCC----------CChhhhhcc
Q 022316 175 YGMCGVVK---ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGR----------PDISEGLRK 240 (299)
Q Consensus 175 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~ 240 (299)
........ ......++....... ..++....+....... ............... .+....+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 231 (299)
T 3g9x_A 155 ADVGRELIIDQNAFIEGALPKCVVRP---LTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQ 231 (299)
T ss_dssp SSHHHHHHTTSCHHHHTHHHHTCSSC---CCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHH
T ss_pred CCcchhhhccchhhHHHhhhhhhccC---CCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhccc
Confidence 00000000 001111111111000 0233333333222211 111111111111100 133455788
Q ss_pred ccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 241 LQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 241 i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
+++|+++|+|++|.++ +..+.+.+.+++ +++++++++||.++.+-++.++..+++
T Consensus 232 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~ 288 (299)
T 3g9x_A 232 SPVPKLLFWGTPGVLIPPAEAARLAESLPN--CKTVDIGPGLHYLQEDNPDLIGSEIAR 288 (299)
T ss_dssp CCSCEEEEEEEECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCHHHHCHHHHHHHHHH
T ss_pred CCCCeEEEecCCCCCCCHHHHHHHHhhCCC--CeEEEeCCCCCcchhcCHHHHHHHHHH
Confidence 9999999999999997 667777777755 889999999999999888777766654
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-34 Score=227.44 Aligned_cols=263 Identities=13% Similarity=0.141 Sum_probs=160.8
Q ss_pred CcceeecCCceEEEEeccCCCC-CeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDK-PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~-p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
++.++..++.+++|...|++.+ ++|||+||++++... +| ..+..++.+||+|+++|+||||.|..+. ...
T Consensus 6 ~~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~-----~~-~~~~~l~~~g~~vi~~D~~G~G~S~~~~---~~~ 76 (293)
T 1mtz_A 6 IENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHD-----YL-LSLRDMTKEGITVLFYDQFGCGRSEEPD---QSK 76 (293)
T ss_dssp EEEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSG-----GG-GGGGGGGGGTEEEEEECCTTSTTSCCCC---GGG
T ss_pred cceEEEECCEEEEEEEECCCCCCCeEEEEeCCCCcchh-----HH-HHHHHHHhcCcEEEEecCCCCccCCCCC---CCc
Confidence 4567888889999999996444 789999997655422 23 4455666678999999999999996532 234
Q ss_pred ccHHHHHHHHHHHHHhc-CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhh--hh----hhhH
Q 022316 100 LSVDDLADQIAEVLNHF-GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK--VM----SNLL 172 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l-~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~----~~~~ 172 (299)
++++++++|+.++++.+ ++++++|+||||||.+|+.+|.++|++|+++|++++......+....... .+ ...+
T Consensus 77 ~~~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (293)
T 1mtz_A 77 FTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAI 156 (293)
T ss_dssp CSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHH
Confidence 89999999999999999 99999999999999999999999999999999999876532211110000 00 0000
Q ss_pred H---hhc-chhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhh-----c-ccccchHHHHHhhcCCCChhhhhcccc
Q 022316 173 Y---YYG-MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLD-----E-RQSSNVWHFLEAINGRPDISEGLRKLQ 242 (299)
Q Consensus 173 ~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 242 (299)
. ..+ ............++......... ..+.....+..... . .....+ ..... ....+..+.+.+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~l~~i~ 233 (293)
T 1mtz_A 157 KKYGSSGSYENPEYQEAVNYFYHQHLLRSED-WPPEVLKSLEYAERRNVYRIMNGPNEF-TITGT-IKDWDITDKISAIK 233 (293)
T ss_dssp HHHHHHTCTTCHHHHHHHHHHHHHHTSCSSC-CCHHHHHHHHHHHHSSHHHHHTCSBTT-BCCST-TTTCBCTTTGGGCC
T ss_pred HHhhccCCcChHHHHHHHHHHHHhhcccccC-chHHHHHhHhhhccchhhhhccCccee-ccccc-ccCCChhhhhccCC
Confidence 0 000 00000000001111100000000 01111111111000 0 000000 00000 11234456688999
Q ss_pred ccEEEEecCCCcch-hhhHHHhhhccccCceEEEEcCchhhhHhHHH----HHHHHhhhh
Q 022316 243 CRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLLGFL----VLLASFCES 297 (299)
Q Consensus 243 ~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~----~~~~~~~~~ 297 (299)
+|+|+|+|++|.+. +.++.+.+.+++ +++++++++||.++.|-. +.+..|+++
T Consensus 234 ~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 291 (293)
T 1mtz_A 234 IPTLITVGEYDEVTPNVARVIHEKIAG--SELHVFRDCSHLTMWEDREGYNKLLSDFILK 291 (293)
T ss_dssp SCEEEEEETTCSSCHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred CCEEEEeeCCCCCCHHHHHHHHHhCCC--ceEEEeCCCCCCccccCHHHHHHHHHHHHHh
Confidence 99999999999544 556677777754 899999999999987744 445566654
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=227.26 Aligned_cols=249 Identities=13% Similarity=0.078 Sum_probs=155.5
Q ss_pred CCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHH
Q 022316 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (299)
Q Consensus 28 ~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (299)
++.+++|...| ++|+|||+||++.++.. |.+.+..+...||+|+++|+||||.|..+ ...++++++++
T Consensus 7 ~g~~l~y~~~g--~g~~vvllHG~~~~~~~------w~~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~~~ 74 (274)
T 1a8q_A 7 DGVEIFYKDWG--QGRPVVFIHGWPLNGDA------WQDQLKAVVDAGYRGIAHDRRGHGHSTPV----WDGYDFDTFAD 74 (274)
T ss_dssp TSCEEEEEEEC--SSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHHHH
T ss_pred CCCEEEEEecC--CCceEEEECCCcchHHH------HHHHHHHHHhCCCeEEEEcCCCCCCCCCC----CCCCcHHHHHH
Confidence 55689999988 67889999999888744 75554444456899999999999999643 13489999999
Q ss_pred HHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCCCcc--------hhHHHHhhhhhhhHHhhcch
Q 022316 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPS--------WTEWLYNKVMSNLLYYYGMC 178 (299)
Q Consensus 108 ~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 178 (299)
|+.+++++++.++++|+||||||.+++.+|.++ |++|+++|++++.+.... ...... ..+...+.. ...
T Consensus 75 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~ 152 (274)
T 1a8q_A 75 DLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVF-DALKNGVLT-ERS 152 (274)
T ss_dssp HHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH-HHHHHHHHH-HHH
T ss_pred HHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHH-HHHHHHhhc-cHH
Confidence 999999999999999999999999999988887 999999999997542210 000000 000000000 000
Q ss_pred hHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--
Q 022316 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-- 256 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~-- 256 (299)
... ......++....... ...++..+.+..................+.. .+..+.+.+|++|+|+|+|++|.++
T Consensus 153 ~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~~~ 228 (274)
T 1a8q_A 153 QFW-KDTAEGFFSANRPGN--KVTQGNKDAFWYMAMAQTIEGGVRCVDAFGY-TDFTEDLKKFDIPTLVVHGDDDQVVPI 228 (274)
T ss_dssp HHH-HHHHHHHTTTTSTTC--CCCHHHHHHHHHHHTTSCHHHHHHHHHHHHH-CCCHHHHTTCCSCEEEEEETTCSSSCG
T ss_pred HHH-HHhcccccccccccc--cccHHHHHHHHHHhhhcChHHHHHHHhhhhc-CcHHHHhhcCCCCEEEEecCcCCCCCc
Confidence 011 001111221110000 0022333322221111111111112222211 3456678899999999999999987
Q ss_pred hhh-HHHhhhccccCceEEEEcCchhhhHhH--HHHHHHHhhh
Q 022316 257 SEA-VHMTSKIDRRYSALVEVWTRVYISLLG--FLVLLASFCE 296 (299)
Q Consensus 257 ~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~--f~~~~~~~~~ 296 (299)
+.. ..+.+.++ ++++++++++||.++.| ..+.++..+.
T Consensus 229 ~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~~~p~~~~~~i~ 269 (274)
T 1a8q_A 229 DATGRKSAQIIP--NAELKVYEGSSHGIAMVPGDKEKFNRDLL 269 (274)
T ss_dssp GGTHHHHHHHST--TCEEEEETTCCTTTTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHhhCC--CceEEEECCCCCceecccCCHHHHHHHHH
Confidence 323 33444554 38999999999999887 7666654443
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=222.73 Aligned_cols=245 Identities=14% Similarity=0.147 Sum_probs=157.4
Q ss_pred CcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
++..+..++.+++|...|+ +.|+|||+||++.++.. . |.+.+..+...||+|+++|+||||.|..+. ..+
T Consensus 3 ~~~~~~~~g~~l~~~~~g~-~~~~vvllHG~~~~~~~----~-~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~ 72 (254)
T 2ocg_A 3 TSAKVAVNGVQLHYQQTGE-GDHAVLLLPGMLGSGET----D-FGPQLKNLNKKLFTVVAWDPRGYGHSRPPD----RDF 72 (254)
T ss_dssp EEEEEEETTEEEEEEEEEC-CSEEEEEECCTTCCHHH----H-CHHHHHHSCTTTEEEEEECCTTSTTCCSSC----CCC
T ss_pred ceeEEEECCEEEEEEEecC-CCCeEEEECCCCCCCcc----c-hHHHHHHHhhCCCeEEEECCCCCCCCCCCC----CCC
Confidence 3456778888999999984 34589999998776322 1 544444444457999999999999996432 124
Q ss_pred c---HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcc
Q 022316 101 S---VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 101 ~---~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
+ +.+.++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++............ ...... ...
T Consensus 73 ~~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~---~~~ 148 (254)
T 2ocg_A 73 PADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIY-EGIRDV---SKW 148 (254)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHH-HTTSCG---GGS
T ss_pred ChHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHH-HHHHHH---HHH
Confidence 5 788899999999999999999999999999999999999999999999998654432111100 000000 000
Q ss_pred hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-
Q 022316 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 256 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~- 256 (299)
...... .+...+..... ......+...+. ..... .........+.+|++|+|+|+|++|.++
T Consensus 149 ~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~--------~~~~~-~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 211 (254)
T 2ocg_A 149 SERTRK-PLEALYGYDYF-------ARTCEKWVDGIR--------QFKHL-PDGNICRHLLPRVQCPALIVHGEKDPLVP 211 (254)
T ss_dssp CHHHHH-HHHHHHCHHHH-------HHHHHHHHHHHH--------GGGGS-GGGBSSGGGGGGCCSCEEEEEETTCSSSC
T ss_pred HHHhHH-HHHHHhcchhh-------HHHHHHHHHHHH--------HHHhc-cCCchhhhhhhcccCCEEEEecCCCccCC
Confidence 111100 01111111000 000011111000 00000 0111234567899999999999999987
Q ss_pred -hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 257 -SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+..+.+.+.+++ ++++++|++||.+..|..+.++..+.++
T Consensus 212 ~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~f 252 (254)
T 2ocg_A 212 RFHADFIHKHVKG--SRLHLMPEGKHNLHLRFADEFNKLAEDF 252 (254)
T ss_dssp HHHHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC--CEEEEcCCCCCchhhhCHHHHHHHHHHH
Confidence 556667777765 8899999999999988777666555443
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=225.24 Aligned_cols=254 Identities=13% Similarity=0.078 Sum_probs=159.9
Q ss_pred CcceeecCCceEEEEeccCCCCCeEEEecccc---cchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~---~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
+.++++.++.+++|...|+++.|+|||+||++ .+... |.+. .+.|.++|+|+++|+||||.|..+. .
T Consensus 8 ~~~~~~~~g~~l~y~~~g~~g~p~vvllHG~~~~~~~~~~------~~~~-~~~L~~~~~vi~~D~~G~G~S~~~~---~ 77 (285)
T 1c4x_A 8 IEKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAASN------WRPI-IPDLAENFFVVAPDLIGFGQSEYPE---T 77 (285)
T ss_dssp EEEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHHH------HGGG-HHHHHTTSEEEEECCTTSTTSCCCS---S
T ss_pred cceEEEECCEEEEEEecCCCCCCEEEEEeCCCCCCcchhh------HHHH-HHHHhhCcEEEEecCCCCCCCCCCC---C
Confidence 45677888889999999853344599999997 44322 6444 4556677999999999999996432 1
Q ss_pred CcccHHHH----HHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch-hHHHHhhhhhhhH
Q 022316 98 PVLSVDDL----ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSNLL 172 (299)
Q Consensus 98 ~~~~~~~~----~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~ 172 (299)
..++++++ ++|+.++++.+++++++|+||||||.+|+.+|.++|++|+++|++++....... .... ......+
T Consensus 78 ~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~ 155 (285)
T 1c4x_A 78 YPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPEL--ARLLAFY 155 (285)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHH--HHHHTGG
T ss_pred cccchhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhH--HHHHHHh
Confidence 24799999 999999999999999999999999999999999999999999999987643211 1100 0011100
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhh---cC----CCChhhhhccccccE
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI---NG----RPDISEGLRKLQCRS 245 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~i~~P~ 245 (299)
.. ...... ...+..++...... ...++..+...... ..+.........+ .. .......+.+|++|+
T Consensus 156 ~~-~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 228 (285)
T 1c4x_A 156 AD-PRLTPY-RELIHSFVYDPENF---PGMEEIVKSRFEVA--NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDV 228 (285)
T ss_dssp GS-CCHHHH-HHHHHTTSSCSTTC---TTHHHHHHHHHHHH--HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCE
T ss_pred cc-ccHHHH-HHHHHHhhcCcccc---cCcHHHHHHHHHhc--cCHHHHHHHHHHhccccccccccccchhhhccCCCCE
Confidence 00 000111 11112111110000 00122222111111 1111111111111 00 012345678999999
Q ss_pred EEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 246 LIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 246 lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
|+|+|++|.++ +..+.+.+.+++ +++++++++||.++.|..+.++..+
T Consensus 229 lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i 278 (285)
T 1c4x_A 229 LVFHGRQDRIVPLDTSLYLTKHLKH--AELVVLDRCGHWAQLERWDAMGPML 278 (285)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHCSS--EEEEEESSCCSCHHHHSHHHHHHHH
T ss_pred EEEEeCCCeeeCHHHHHHHHHhCCC--ceEEEeCCCCcchhhcCHHHHHHHH
Confidence 99999999997 566677777754 8899999999999987655554333
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=226.70 Aligned_cols=251 Identities=14% Similarity=0.116 Sum_probs=162.7
Q ss_pred cCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
.++.+++|...| ++++|||+||++.++.. |.+.+..+..+||+|+++|+||||.|..+. ..+++++++
T Consensus 10 ~~g~~l~y~~~g--~~~pvvllHG~~~~~~~------~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~~~ 77 (279)
T 1hkh_A 10 STPIELYYEDQG--SGQPVVLIHGYPLDGHS------WERQTRELLAQGYRVITYDRRGFGGSSKVN----TGYDYDTFA 77 (279)
T ss_dssp TEEEEEEEEEES--SSEEEEEECCTTCCGGG------GHHHHHHHHHTTEEEEEECCTTSTTSCCCS----SCCSHHHHH
T ss_pred CCCeEEEEEecC--CCCcEEEEcCCCchhhH------HhhhHHHHHhCCcEEEEeCCCCCCCCCCCC----CCCCHHHHH
Confidence 355688999888 56789999999988754 755544444568999999999999996532 358999999
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC-cccEEEEecCCCCCcc--h--h----HHHHhhhhhhhHHhhcc
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKAPS--W--T----EWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~~~--~--~----~~~~~~~~~~~~~~~~~ 177 (299)
+|+.+++++++.++++|+||||||.+++.+|.++|+ +|+++|++++...... . . .... ..+...... ..
T Consensus 78 ~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 155 (279)
T 1hkh_A 78 ADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVF-DGIEAAAKG-DR 155 (279)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHH-HHHHHHHHH-CH
T ss_pred HHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHH-HHHHHHhhh-hh
Confidence 999999999999999999999999999999999999 9999999998543210 0 0 0000 000000000 00
Q ss_pred hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccc---cccEEEEecCCCc
Q 022316 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL---QCRSLIFVGESSP 254 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~P~lii~G~~D~ 254 (299)
.... ......++....... ....++..+.+..................+ ..+....+.++ ++|+|+|+|++|.
T Consensus 156 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~~~~P~lii~G~~D~ 231 (279)
T 1hkh_A 156 FAWF-TDFYKNFYNLDENLG-SRISEQAVTGSWNVAIGSAPVAAYAVVPAW--IEDFRSDVEAVRAAGKPTLILHGTKDN 231 (279)
T ss_dssp HHHH-HHHHHHHHTHHHHBT-TTBCHHHHHHHHHHHHTSCTTHHHHTHHHH--TCBCHHHHHHHHHHCCCEEEEEETTCS
T ss_pred hhhH-HHHHhhhhhcccCCc-ccccHHHHHhhhhhhccCcHHHHHHHHHHH--hhchhhhHHHhccCCCCEEEEEcCCCc
Confidence 0111 111122222110000 000233333333332222333333333333 24556677888 9999999999999
Q ss_pred ch--hhh-HHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 255 FH--SEA-VHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 255 ~~--~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
++ +.. +.+.+.+++ +++++++++||.++.|..+.++..+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~ 275 (279)
T 1hkh_A 232 ILPIDATARRFHQAVPE--ADYVEVEGAPHGLLWTHADEVNAALKT 275 (279)
T ss_dssp SSCTTTTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred cCChHHHHHHHHHhCCC--eeEEEeCCCCccchhcCHHHHHHHHHH
Confidence 87 444 667777754 899999999999998876666544443
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-35 Score=228.01 Aligned_cols=233 Identities=11% Similarity=0.122 Sum_probs=148.9
Q ss_pred eEEEEeccCC---CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHH
Q 022316 31 SLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (299)
Q Consensus 31 ~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (299)
+|+|...|++ ++|+|||+||++.++.. |.+ +.+.|.+.|+|+++|+||||.|..+ ..++++++++
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~~------w~~-~~~~L~~~~~via~Dl~G~G~S~~~-----~~~~~~~~a~ 69 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDN------LGV-LARDLVNDHNIIQVDVRNHGLSPRE-----PVMNYPAMAQ 69 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTTT------THH-HHHHHTTTSCEEEECCTTSTTSCCC-----SCCCHHHHHH
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHhH------HHH-HHHHHHhhCcEEEecCCCCCCCCCC-----CCcCHHHHHH
Confidence 4678888864 67899999999988744 744 4566777799999999999999642 1478999999
Q ss_pred HHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcc---hhHHHHhhhhhhhHHhhcchhHHHHH
Q 022316 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWLYNKVMSNLLYYYGMCGVVKEL 184 (299)
Q Consensus 108 ~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (299)
|+.++++.+++++++|+||||||.+|+.+|.++|++|+++|++++.+.... ..... ..+... ........ .
T Consensus 70 dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~--~~~~~~-~~~~~~~~--~- 143 (255)
T 3bf7_A 70 DLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIF--AAINAV-SESDAQTR--Q- 143 (255)
T ss_dssp HHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHH--HHHHHH-HHSCCCSH--H-
T ss_pred HHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHH--HHHHhc-cccccccH--H-
Confidence 999999999999999999999999999999999999999999986543211 11111 000000 00000000 0
Q ss_pred HHHhhhccccccCCCCCchHHHHHHHHhhhcc----cccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hh
Q 022316 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDER----QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 258 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~ 258 (299)
.....+.... ..+.....+...+... ...........+.. . ..+.++++|+|+|+|++|.++ +.
T Consensus 144 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~l~~i~~P~l~i~G~~D~~~~~~~ 213 (255)
T 3bf7_A 144 QAAAIMRQHL------NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVG-W---EKIPAWDHPALFIPGGNSPYVSEQY 213 (255)
T ss_dssp HHHHHHTTTC------CCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHC-C---CCCCCCCSCEEEECBTTCSTTCGGG
T ss_pred HHHHHHhhhc------chhHHHHHHHHhccCCceeecHHHHHhhhhhccc-c---ccccccCCCeEEEECCCCCCCCHHH
Confidence 0011111000 0122222111111100 00001111111111 0 125689999999999999887 55
Q ss_pred hHHHhhhccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 259 AVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
.+.+.+.+++ ++++++|++||.++.|-++.++.
T Consensus 214 ~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~ 246 (255)
T 3bf7_A 214 RDDLLAQFPQ--ARAHVIAGAGHWVHAEKPDAVLR 246 (255)
T ss_dssp HHHHHHHCTT--EEECCBTTCCSCHHHHCHHHHHH
T ss_pred HHHHHHHCCC--CeEEEeCCCCCccccCCHHHHHH
Confidence 6667777754 88999999999999875555443
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=225.59 Aligned_cols=253 Identities=13% Similarity=0.161 Sum_probs=160.7
Q ss_pred cceeecC--C--ceEEEEeccCCCCC-eEEEecccc---cchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 22 DNLIKTS--H--GSLSVTIYGDQDKP-ALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 22 ~~~i~~~--~--~~l~~~~~g~~~~p-~lvl~HG~~---~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
.++++++ + .+++|...|+ ++ +|||+||++ .+... |.+.+.+.+.++|+|+++|+||||.|+.+.
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g~--g~~~vvllHG~~~~~~~~~~------~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 84 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCGQ--GDETVVLLHGSGPGATGWAN------FSRNIDPLVEAGYRVILLDCPGWGKSDSVV 84 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEECC--CSSEEEEECCCSTTCCHHHH------TTTTHHHHHHTTCEEEEECCTTSTTSCCCC
T ss_pred ceEEEEcCCCcEEEEEEeccCC--CCceEEEECCCCcccchhHH------HHHhhhHHHhcCCeEEEEcCCCCCCCCCCC
Confidence 4567777 7 7999999984 45 899999987 33322 645542566777999999999999996532
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh---HHHHhhhhhh
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT---EWLYNKVMSN 170 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~ 170 (299)
...++++++++++.++++.+++++++|+||||||.+|+.+|.++|++|+++|++++........ .......+..
T Consensus 85 ---~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (289)
T 1u2e_A 85 ---NSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQ 161 (289)
T ss_dssp ---CSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHH
T ss_pred ---ccccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHH
Confidence 1248999999999999999999999999999999999999999999999999999865321100 0000000111
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhc----CCCChhhhhccccccEE
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN----GRPDISEGLRKLQCRSL 246 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l 246 (299)
.... ...... ......++..... ..++.......... .....+..+...+. ...+....+.+|++|+|
T Consensus 162 ~~~~-~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 233 (289)
T 1u2e_A 162 LYRQ-PTIENL-KLMMDIFVFDTSD-----LTDALFEARLNNML-SRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTL 233 (289)
T ss_dssp HHHS-CCHHHH-HHHHHTTSSCTTS-----CCHHHHHHHHHHHH-HTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEE
T ss_pred HHhc-chHHHH-HHHHHHhhcCccc-----CCHHHHHHHHHHhh-cChhHHHHHHHHHHhccccccchhhHHhhcCCCeE
Confidence 1000 001111 1111111111100 01222222111111 11111222211110 11345567889999999
Q ss_pred EEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 247 IFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 247 ii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
+|+|++|.++ +..+.+.+.+++ +++++++++||.++.|-.+.++..+
T Consensus 234 ii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i 282 (289)
T 1u2e_A 234 IVWGRNDRFVPMDAGLRLLSGIAG--SELHIFRDCGHWAQWEHADAFNQLV 282 (289)
T ss_dssp EEEETTCSSSCTHHHHHHHHHSTT--CEEEEESSCCSCHHHHTHHHHHHHH
T ss_pred EEeeCCCCccCHHHHHHHHhhCCC--cEEEEeCCCCCchhhcCHHHHHHHH
Confidence 9999999997 566777777764 8899999999999887665554333
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=227.35 Aligned_cols=248 Identities=13% Similarity=0.100 Sum_probs=169.7
Q ss_pred ceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHH
Q 022316 30 GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (299)
Q Consensus 30 ~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 109 (299)
++++|...|+ ++|+|||+||++.+... |.+. .+.+.+||+|+++|+||||.|..........++++++++++
T Consensus 9 ~~l~~~~~g~-~~p~vv~~HG~~~~~~~------~~~~-~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 80 (269)
T 4dnp_A 9 DALNVRVVGS-GERVLVLAHGFGTDQSA------WNRI-LPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDL 80 (269)
T ss_dssp HHTTCEEECS-CSSEEEEECCTTCCGGG------GTTT-GGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHH
T ss_pred HHhhhhhcCC-CCCEEEEEeCCCCcHHH------HHHH-HHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHH
Confidence 4677888884 56899999999887744 6444 56666799999999999999965222223445999999999
Q ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH---hhhhhhhHH--hhcchhHHHHH
Q 022316 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY---NKVMSNLLY--YYGMCGVVKEL 184 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~ 184 (299)
.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.+.......+.. ......... ........ ..
T Consensus 81 ~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 159 (269)
T 4dnp_A 81 LHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWV-NG 159 (269)
T ss_dssp HHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHH-HH
T ss_pred HHHHHhcCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHH-HH
Confidence 9999999999999999999999999999999999999999998765432111100 000000000 00111111 11
Q ss_pred HHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHH
Q 022316 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 262 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~ 262 (299)
.....+... .++..+.+...+..............+.. .+....+.++++|+++|+|++|.++ +....+
T Consensus 160 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 230 (269)
T 4dnp_A 160 FAPLAVGAD--------VPAAVREFSRTLFNMRPDITLFVSRTVFN-SDMRGVLGLVKVPCHIFQTARDHSVPASVATYL 230 (269)
T ss_dssp HHHHHHCSS--------CHHHHHHHHHHHHHSCHHHHHHHHHHHHT-CCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHH
T ss_pred hhhhhccCC--------ChhHHHHHHHHHHccCcchhhhHhhhhcc-hhhHhhhccccCCEEEEecCCCcccCHHHHHHH
Confidence 111122111 24455555555554444445555554443 5667788999999999999999997 666777
Q ss_pred hhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 263 TSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.+.+++. +++++++++||..+.+-.+.++..+.
T Consensus 231 ~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~ 263 (269)
T 4dnp_A 231 KNHLGGK-NTVHWLNIEGHLPHLSAPTLLAQELR 263 (269)
T ss_dssp HHHSSSC-EEEEEEEEESSCHHHHCHHHHHHHHH
T ss_pred HHhCCCC-ceEEEeCCCCCCccccCHHHHHHHHH
Confidence 7777653 78999999999998876655554443
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-34 Score=227.89 Aligned_cols=258 Identities=10% Similarity=0.026 Sum_probs=167.9
Q ss_pred CCCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 17 PPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 17 ~~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
..+.+.+++++++.+++|...| ++|+|||+||++.+... |.+.+..++.+||+|+++|+||||.|..+.
T Consensus 6 ~~~~~~~~~~~~g~~l~~~~~g--~~~~vv~~HG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~--- 74 (309)
T 3u1t_A 6 EFPFAKRTVEVEGATIAYVDEG--SGQPVLFLHGNPTSSYL------WRNIIPYVVAAGYRAVAPDLIGMGDSAKPD--- 74 (309)
T ss_dssp CCCCCCEEEEETTEEEEEEEEE--CSSEEEEECCTTCCGGG------GTTTHHHHHHTTCEEEEECCTTSTTSCCCS---
T ss_pred cccccceEEEECCeEEEEEEcC--CCCEEEEECCCcchhhh------HHHHHHHHHhCCCEEEEEccCCCCCCCCCC---
Confidence 3456778899999999999999 47899999999887744 656655557889999999999999997532
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc----chhHHHHhhhhhhhH
Q 022316 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP----SWTEWLYNKVMSNLL 172 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~----~~~~~~~~~~~~~~~ 172 (299)
..++++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++..... .+..+.. .....+
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~~~ 151 (309)
T 3u1t_A 75 -IEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGP--QLGPLF 151 (309)
T ss_dssp -SCCCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHH--HHHHHH
T ss_pred -cccCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccch--hhhHHH
Confidence 258999999999999999999999999999999999999999999999999999765543 1111110 000000
Q ss_pred HhhcchhHHH------HHHHHhhhccc-cccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhcCC----------CCh
Q 022316 173 YYYGMCGVVK------ELLLKRYFSKE-VRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGR----------PDI 234 (299)
Q Consensus 173 ~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~ 234 (299)
.......... ......++... .... ..++..+.+...+... ............... .+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (309)
T 3u1t_A 152 RDLRTADVGEKMVLDGNFFVETILPEMGVVRS---LSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKN 228 (309)
T ss_dssp HHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSC---CCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHH
T ss_pred HHHhccchhhhhccccceehhhhccccccccc---CCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhh
Confidence 0000000000 00111111111 0000 0233333333222211 111111111111100 133
Q ss_pred hhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 235 SEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 235 ~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
...+.++++|+|+|+|++|.++ +....+.+.+++ .+.++++++||.++.+..+.++.
T Consensus 229 ~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~ 287 (309)
T 3u1t_A 229 GEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPN--LEVRFVGAGTHFLQEDHPHLIGQ 287 (309)
T ss_dssp HHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCHHHHCHHHHHH
T ss_pred hhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhCCC--CEEEEecCCcccchhhCHHHHHH
Confidence 4557889999999999999997 556677777765 67888899999998775555443
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=227.88 Aligned_cols=126 Identities=13% Similarity=0.147 Sum_probs=105.0
Q ss_pred cceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
..++..++.+++|...| ++|+|||+||++.+... |.+.+..+..+||+|+++|+||||.|+.+.......++
T Consensus 13 ~~~~~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~------w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~ 84 (328)
T 2cjp_A 13 HKMVAVNGLNMHLAELG--EGPTILFIHGFPELWYS------WRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFS 84 (328)
T ss_dssp EEEEEETTEEEEEEEEC--SSSEEEEECCTTCCGGG------GHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGS
T ss_pred eeEecCCCcEEEEEEcC--CCCEEEEECCCCCchHH------HHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCccccc
Confidence 45677788899999998 57899999999988744 74554444456999999999999999653101123589
Q ss_pred HHHHHHHHHHHHHhcC--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 102 VDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
++++++|+.++++.++ +++++|+||||||.+|+.+|.++|++|+++|+++++..
T Consensus 85 ~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~ 140 (328)
T 2cjp_A 85 ILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFS 140 (328)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCC
Confidence 9999999999999999 99999999999999999999999999999999997643
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=223.23 Aligned_cols=261 Identities=14% Similarity=0.115 Sum_probs=174.5
Q ss_pred CCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
..++++++.++.+++|..+|++++|+|||+||++.+... |...+..+...||+|+++|+||+|.|.... ...
T Consensus 3 ~~~~~~~~~~g~~l~~~~~g~~~~~~vv~~hG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~ 74 (286)
T 3qit_A 3 AMEEKFLEFGGNQICLCSWGSPEHPVVLCIHGILEQGLA------WQEVALPLAAQGYRVVAPDLFGHGRSSHLE--MVT 74 (286)
T ss_dssp CCEEEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SGG
T ss_pred hhhhheeecCCceEEEeecCCCCCCEEEEECCCCcccch------HHHHHHHhhhcCeEEEEECCCCCCCCCCCC--CCC
Confidence 356778899999999999998889999999999988754 645544555568999999999999996532 234
Q ss_pred cccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHH---hh
Q 022316 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY---YY 175 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~---~~ 175 (299)
.++++++++++..+++.++.++++++||||||.+++.+|.++|++|+++|++++...............+...+. ..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (286)
T 3qit_A 75 SYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSST 154 (286)
T ss_dssp GCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhcc
Confidence 689999999999999999999999999999999999999999999999999998876543221000000001000 00
Q ss_pred c----chhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccc---------hHHHHHhhc----CCCChhhhh
Q 022316 176 G----MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSN---------VWHFLEAIN----GRPDISEGL 238 (299)
Q Consensus 176 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~----~~~~~~~~~ 238 (299)
. .................. ..+....+........... .......+. ...+....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T 3qit_A 155 PQHPIFPDVATAASRLRQAIPSL-------SEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEML 227 (286)
T ss_dssp CCCCCBSSHHHHHHHHHHHSTTS-------CHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHH
T ss_pred ccccccccHHHHHHHhhcCCccc-------CHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHH
Confidence 0 111110000000000110 2333333333222211110 000000000 112344567
Q ss_pred ccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 239 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 239 ~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
.++++|+++|+|++|.++ +....+.+.+++ ++++++++ ||..+.+..+.++..+++
T Consensus 228 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 228 KSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQ--AKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp HHCCSCEEEEEETTCCSSCHHHHHHHHHHSTT--SEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred hccCCCeEEEEeCCCcccCHHHHHHHHHHCCC--CeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 889999999999999998 566677777754 78999999 999999999999887764
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=224.45 Aligned_cols=122 Identities=8% Similarity=0.014 Sum_probs=105.1
Q ss_pred cceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
.+++..++.+++|...|++.+|+|||+||++.++.. |.+. .+.|.+.|+|+++|+||||+|+.+. ...++
T Consensus 23 ~~~~~~~g~~l~y~~~G~g~~~~vvllHG~~~~~~~------w~~~-~~~L~~~~~via~Dl~GhG~S~~~~---~~~~~ 92 (318)
T 2psd_A 23 CKQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYL------WRHV-VPHIEPVARCIIPDLIGMGKSGKSG---NGSYR 92 (318)
T ss_dssp CEEEEETTEEEEEEECCSCTTSEEEEECCTTCCGGG------GTTT-GGGTTTTSEEEEECCTTSTTCCCCT---TSCCS
T ss_pred ceEEeeCCeEEEEEEcCCCCCCeEEEECCCCCcHHH------HHHH-HHHhhhcCeEEEEeCCCCCCCCCCC---CCccC
Confidence 356788888999999996666799999999988744 7444 5667778899999999999996531 23489
Q ss_pred HHHHHHHHHHHHHhcCC-CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCC
Q 022316 102 VDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 153 (299)
++++++++.++++.+++ ++++|+||||||.+|+.+|.++|++|+++|++++.
T Consensus 93 ~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~ 145 (318)
T 2psd_A 93 LLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESV 145 (318)
T ss_dssp HHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccc
Confidence 99999999999999999 99999999999999999999999999999998854
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-33 Score=222.01 Aligned_cols=259 Identities=10% Similarity=0.061 Sum_probs=167.7
Q ss_pred CCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
...+.++++.++.+++|...| ++|+|||+||++.+... |... ...|.+.|+|+++|+||||.|..+ .
T Consensus 8 ~~~~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~------~~~~-~~~L~~~~~vi~~D~~G~G~S~~~----~ 74 (301)
T 3kda_A 8 NGFESAYREVDGVKLHYVKGG--QGPLVMLVHGFGQTWYE------WHQL-MPELAKRFTVIAPDLPGLGQSEPP----K 74 (301)
T ss_dssp TTCEEEEEEETTEEEEEEEEE--SSSEEEEECCTTCCGGG------GTTT-HHHHTTTSEEEEECCTTSTTCCCC----S
T ss_pred cccceEEEeeCCeEEEEEEcC--CCCEEEEECCCCcchhH------HHHH-HHHHHhcCeEEEEcCCCCCCCCCC----C
Confidence 345667888899999999999 78899999999988744 6454 455666699999999999999754 2
Q ss_pred CcccHHHHHHHHHHHHHhcCCCc-EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH------------HHH
Q 022316 98 PVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE------------WLY 164 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~-~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~------------~~~ 164 (299)
..++++++++++.+++++++.++ ++|+||||||.+++.+|.++|++|+++|++++......... |..
T Consensus 75 ~~~~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (301)
T 3kda_A 75 TGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHF 154 (301)
T ss_dssp SCSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHH
T ss_pred CCccHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhH
Confidence 35899999999999999999988 99999999999999999999999999999998754321111 000
Q ss_pred h-----hhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhccc-ccchHHHHHhhc----CCCCh
Q 022316 165 N-----KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAIN----GRPDI 234 (299)
Q Consensus 165 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~ 234 (299)
. ..+...+.. .............++...... .++..+.+...+.... .......+..+. .....
T Consensus 155 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (301)
T 3kda_A 155 SFFAADDRLAETLIA-GKERFFLEHFIKSHASNTEVF-----SERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAEL 228 (301)
T ss_dssp HHHHCSTTHHHHHHT-TCHHHHHHHHHHHTCSSGGGS-----CHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHhhcCcchHHHHhc-cchHHHHHHHHHhccCCcccC-----CHHHHHHHHHHhccccccchHHHHHHhhccchhhcccc
Confidence 0 000010000 111111111222222111110 2344444433332211 111111111110 00111
Q ss_pred hhhhccccccEEEEecCCCcchhhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 235 SEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 235 ~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
...+.++++|+|+|+|++|...+....+.+.+++ +++++++++||.++.|-++.++..+..
T Consensus 229 ~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (301)
T 3kda_A 229 AKTRLQMPTMTLAGGGAGGMGTFQLEQMKAYAED--VEGHVLPGCGHWLPEECAAPMNRLVID 289 (301)
T ss_dssp TTSCBCSCEEEEEECSTTSCTTHHHHHHHTTBSS--EEEEEETTCCSCHHHHTHHHHHHHHHH
T ss_pred hhhccccCcceEEEecCCCCChhHHHHHHhhccc--CeEEEcCCCCcCchhhCHHHHHHHHHH
Confidence 2234489999999999999333666667776654 899999999999999877666654443
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-33 Score=222.68 Aligned_cols=254 Identities=15% Similarity=0.096 Sum_probs=156.3
Q ss_pred eeecCCceEEEEeccCCC-CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccH
Q 022316 24 LIKTSHGSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~-~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (299)
+...++.+++|...|+++ +|+|||+||++.+... |. .+.+.|.++|+|+++|+||||.|..+. ....+++
T Consensus 10 ~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~------~~-~~~~~L~~~~~vi~~Dl~G~G~S~~~~--~~~~~~~ 80 (285)
T 3bwx_A 10 WTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARD------FE-DLATRLAGDWRVLCPEMRGRGDSDYAK--DPMTYQP 80 (285)
T ss_dssp EECTTSCEEEEEEECBCTTSCCEEEECCTTCCGGG------GH-HHHHHHBBTBCEEEECCTTBTTSCCCS--SGGGCSH
T ss_pred eecCCCceEEEEEcCCCCCCCcEEEECCCCcchhh------HH-HHHHHhhcCCEEEeecCCCCCCCCCCC--CccccCH
Confidence 334466799999999654 7899999999988744 64 445667779999999999999996431 1235899
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhc-chhHH
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG-MCGVV 181 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 181 (299)
+++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.+........ .+........ .....
T Consensus 81 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 156 (285)
T 3bwx_A 81 MQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLE----RIRGYVGQGRNFETWM 156 (285)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHH----HHHHHTTCCCEESSHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhH----HHHHHhcCCcccccHH
Confidence 999999999999999999999999999999999999999999999999865443221110 0000000000 00000
Q ss_pred -HHHHHHhhhccccccCCCCCchHHHHHHHHhhhccccc--------chHHHHHhh---cCCCChhhhhccc-cccEEEE
Q 022316 182 -KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSS--------NVWHFLEAI---NGRPDISEGLRKL-QCRSLIF 248 (299)
Q Consensus 182 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~~~~i-~~P~lii 248 (299)
....+...+...+... ............+...... .....+... ....+....+.++ ++|+|+|
T Consensus 157 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii 233 (285)
T 3bwx_A 157 HAARALQESSGDVYPDW---DITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVL 233 (285)
T ss_dssp HHHHHHHHHHTTTSTTC---CHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEE
T ss_pred HHHHHHHHhhhhccccc---ChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEE
Confidence 0001111111111000 0111222222211111000 000000000 0112333445566 8999999
Q ss_pred ecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHH---HHHHhhh
Q 022316 249 VGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLV---LLASFCE 296 (299)
Q Consensus 249 ~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~---~~~~~~~ 296 (299)
+|++|.++ +..+++.+. + ++++++++++||.++.|-.+ .+..|++
T Consensus 234 ~G~~D~~~~~~~~~~~~~~-~--~~~~~~i~~~gH~~~~e~p~~~~~i~~fl~ 283 (285)
T 3bwx_A 234 RGETSDILSAQTAAKMASR-P--GVELVTLPRIGHAPTLDEPESIAAIGRLLE 283 (285)
T ss_dssp EETTCSSSCHHHHHHHHTS-T--TEEEEEETTCCSCCCSCSHHHHHHHHHHHT
T ss_pred EeCCCCccCHHHHHHHHhC-C--CcEEEEeCCCCccchhhCchHHHHHHHHHH
Confidence 99999987 455666665 4 38999999999998876444 4555654
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=218.10 Aligned_cols=245 Identities=9% Similarity=0.056 Sum_probs=164.5
Q ss_pred CCceEEEEeccCCCCCeEEEecccccchhhhccccccC-chhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC-PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 28 ~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~-~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
++.+++|...| ++|+|||+||++.+... |. ..+..++.+||+|+++|+||||.|..+ ..+++++++
T Consensus 31 ~~~~l~y~~~g--~~~~vv~lHG~~~~~~~------~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~-----~~~~~~~~~ 97 (293)
T 3hss_A 31 RVINLAYDDNG--TGDPVVFIAGRGGAGRT------WHPHQVPAFLAAGYRCITFDNRGIGATENA-----EGFTTQTMV 97 (293)
T ss_dssp CEEEEEEEEEC--SSEEEEEECCTTCCGGG------GTTTTHHHHHHTTEEEEEECCTTSGGGTTC-----CSCCHHHHH
T ss_pred ccceEEEEEcC--CCCEEEEECCCCCchhh------cchhhhhhHhhcCCeEEEEccCCCCCCCCc-----ccCCHHHHH
Confidence 45588999988 67899999999988755 65 344555678999999999999988542 248999999
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHH-HHH
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK-ELL 185 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 185 (299)
+++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.............................. ...
T Consensus 98 ~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (293)
T 3hss_A 98 ADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARAR 177 (293)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999877654333222111111100111111110 001
Q ss_pred HHhhhccccccCCCCCchHHHHHHHHhhhccc---ccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhH
Q 022316 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQ---SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 260 (299)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~ 260 (299)
....+...... .......+........ ...+...... ....+....+.++++|+++|+|++|.++ +..+
T Consensus 178 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~ 251 (293)
T 3hss_A 178 LLENFSRKTLN-----DDVAVGDWIAMFSMWPIKSTPGLRCQLDC-APQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGR 251 (293)
T ss_dssp HHHHSCHHHHT-----CHHHHHHHHHHHHHSCCCCCHHHHHHHTS-SCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHH
T ss_pred Hhhhccccccc-----ccccHHHHHHHHhhccccccHHHHhHhhh-ccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHH
Confidence 11111111111 1222222222222221 1122222222 2335666778999999999999999998 5667
Q ss_pred HHhhhccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 261 HMTSKIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
.+.+.+++ +++++++++||..+.+-.+.++.
T Consensus 252 ~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~ 282 (293)
T 3hss_A 252 EVADALPN--GRYLQIPDAGHLGFFERPEAVNT 282 (293)
T ss_dssp HHHHHSTT--EEEEEETTCCTTHHHHSHHHHHH
T ss_pred HHHHHCCC--ceEEEeCCCcchHhhhCHHHHHH
Confidence 77777755 89999999999998875554443
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-32 Score=219.62 Aligned_cols=127 Identities=14% Similarity=0.114 Sum_probs=102.7
Q ss_pred CCcceeec-CCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCC
Q 022316 20 GKDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 20 ~~~~~i~~-~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
.++..+++ ++.+++|...|++++++|||+||++.++.. ......+ .++|+|+++|+||||+|..+. ..
T Consensus 11 ~~~~~~~~~~g~~l~y~~~G~~~g~pvvllHG~~~~~~~--------~~~~~~~~~~~~~vi~~D~~G~G~S~~~~--~~ 80 (313)
T 1azw_A 11 YQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCN--------DKMRRFHDPAKYRIVLFDQRGSGRSTPHA--DL 80 (313)
T ss_dssp SEEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCC--------GGGGGGSCTTTEEEEEECCTTSTTSBSTT--CC
T ss_pred cccceEEcCCCCEEEEEecCCCCCCeEEEECCCCCcccc--------HHHHHhcCcCcceEEEECCCCCcCCCCCc--cc
Confidence 34566777 456899999997677889999998765421 1112333 469999999999999996432 12
Q ss_pred CcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
..++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++....
T Consensus 81 ~~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~ 139 (313)
T 1azw_A 81 VDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLR 139 (313)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred ccccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCc
Confidence 35789999999999999999999999999999999999999999999999999876543
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=220.39 Aligned_cols=262 Identities=16% Similarity=0.109 Sum_probs=162.6
Q ss_pred CCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC-C
Q 022316 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-D 96 (299)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-~ 96 (299)
...+.+.+.+++.+++|...| ++|+|||+||++.+... |.+. ...+.+||+|+++|+||||.|+.+... .
T Consensus 11 ~~~~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~------~~~~-~~~l~~~~~v~~~D~~G~G~S~~~~~~~~ 81 (306)
T 3r40_A 11 PGFGSEWINTSSGRIFARVGG--DGPPLLLLHGFPQTHVM------WHRV-APKLAERFKVIVADLPGYGWSDMPESDEQ 81 (306)
T ss_dssp TTCEEEEECCTTCCEEEEEEE--CSSEEEEECCTTCCGGG------GGGT-HHHHHTTSEEEEECCTTSTTSCCCCCCTT
T ss_pred cCCceEEEEeCCEEEEEEEcC--CCCeEEEECCCCCCHHH------HHHH-HHHhccCCeEEEeCCCCCCCCCCCCCCcc
Confidence 355667888899999999999 67899999999988754 6444 566667999999999999999753220 0
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHH---Hhhh------
Q 022316 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL---YNKV------ 167 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~------ 167 (299)
...++++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.+......... ....
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T 3r40_A 82 HTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFL 161 (306)
T ss_dssp CGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHh
Confidence 1258999999999999999999999999999999999999999999999999999855432111100 0000
Q ss_pred -----hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhcCCCChh------
Q 022316 168 -----MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDIS------ 235 (299)
Q Consensus 168 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------ 235 (299)
....+.. .............+...... ....++..+.+...+... ........+..... .+..
T Consensus 162 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 236 (306)
T 3r40_A 162 AQPAPLPENLLG-GDPDFYVKAKLASWTRAGDL---SAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAY-ADFEHDKIDV 236 (306)
T ss_dssp TSCTTHHHHHHT-SCHHHHHHHHHHHTSSSSSS---TTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHT-HHHHHHHHHH
T ss_pred hcccchHHHHHc-CCHHHHHHHHhhcccCCCcc---ccCCHHHHHHHHHHHccCCCcchhhHHHHhccc-ccchhhhhhh
Confidence 0000000 00111111122222211000 111344555544433321 11111222222111 1111
Q ss_pred hhhccccccEEEEecCCCcch--hhhHH-HhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 236 EGLRKLQCRSLIFVGESSPFH--SEAVH-MTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 236 ~~~~~i~~P~lii~G~~D~~~--~~~~~-~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
..+.++++|+|+|+|++|.++ ....+ +.+..+ +.+++++ ++||..+.+..+.++..+.
T Consensus 237 ~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~-~~gH~~~~e~p~~~~~~i~ 297 (306)
T 3r40_A 237 EAGNKIPVPMLALWGASGIAQSAATPLDVWRKWAS--DVQGAPI-ESGHFLPEEAPDQTAEALV 297 (306)
T ss_dssp HHTCCBCSCEEEEEETTCC------CHHHHHHHBS--SEEEEEE-SSCSCHHHHSHHHHHHHHH
T ss_pred hhccCCCcceEEEEecCCcccCchhHHHHHHhhcC--CCeEEEe-cCCcCchhhChHHHHHHHH
Confidence 146889999999999999987 23333 333343 3778888 7899999886665544333
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-33 Score=222.10 Aligned_cols=255 Identities=15% Similarity=0.146 Sum_probs=166.4
Q ss_pred CCCCCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCC-CCCCCCC
Q 022316 15 TPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAI 93 (299)
Q Consensus 15 ~~~~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~-G~S~~~~ 93 (299)
..+.+.+...+++++++++|...|++++|+|||+||++.+... |... ...|.+||+|+++|+||+ |.|..+.
T Consensus 40 ~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~vv~lHG~~~~~~~------~~~~-~~~L~~g~~vi~~D~~G~gG~s~~~~ 112 (306)
T 2r11_A 40 LWPVRCKSFYISTRFGQTHVIASGPEDAPPLVLLHGALFSSTM------WYPN-IADWSSKYRTYAVDIIGDKNKSIPEN 112 (306)
T ss_dssp TCCSCCEEEEECCTTEEEEEEEESCTTSCEEEEECCTTTCGGG------GTTT-HHHHHHHSEEEEECCTTSSSSCEECS
T ss_pred hCCCCcceEEEecCCceEEEEeeCCCCCCeEEEECCCCCCHHH------HHHH-HHHHhcCCEEEEecCCCCCCCCCCCC
Confidence 3445566788899999999999997778999999999987644 6444 455666999999999999 8886432
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHH
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (299)
..++++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++...................
T Consensus 113 ----~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-- 186 (306)
T 2r11_A 113 ----VSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLT-- 186 (306)
T ss_dssp ----CCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTT--
T ss_pred ----CCCCHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHH--
Confidence 25899999999999999999999999999999999999999999999999999987765322211111110000
Q ss_pred hhcchhHHHHHHHHhhhccccccCCCCCchHHH--HHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecC
Q 022316 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIV--QACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (299)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 251 (299)
........ ..++....... .+... ......+.. ....+....... ........+.++++|+|+|+|+
T Consensus 187 ----~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~ 255 (306)
T 2r11_A 187 ----ASNGVETF-LNWMMNDQNVL----HPIFVKQFKAGVMWQD-GSRNPNPNADGF-PYVFTDEELRSARVPILLLLGE 255 (306)
T ss_dssp ----STTHHHHH-HHHHTTTCCCS----CHHHHHHHHHHHHCCS-SSCCCCCCTTSS-SCBCCHHHHHTCCSCEEEEEET
T ss_pred ----HHHHHHHH-HHHhhCCcccc----ccccccccHHHHHHHH-hhhhhhhhccCC-CCCCCHHHHhcCCCCEEEEEeC
Confidence 01111111 12222111100 11111 111111111 011111000011 1123456688999999999999
Q ss_pred CCcch--hhhHHHhh-hccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 252 SSPFH--SEAVHMTS-KIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 252 ~D~~~--~~~~~~~~-~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
+|.++ +...+..+ .+++ ++++++|++||..+.+..+.++..+
T Consensus 256 ~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i 300 (306)
T 2r11_A 256 HEVIYDPHSALHRASSFVPD--IEAEVIKNAGHVLSMEQPTYVNERV 300 (306)
T ss_dssp TCCSSCHHHHHHHHHHHSTT--CEEEEETTCCTTHHHHSHHHHHHHH
T ss_pred CCcccCHHHHHHHHHHHCCC--CEEEEeCCCCCCCcccCHHHHHHHH
Confidence 99987 44444444 3443 8999999999999887555554433
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-32 Score=217.89 Aligned_cols=126 Identities=12% Similarity=0.087 Sum_probs=102.3
Q ss_pred Ccceeec-CCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 21 KDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
+++++++ ++.+++|...|++++++|||+||++.++.. ..| ...+ .++|+|+++|+||||+|..+. ...
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~g~~vvllHG~~~~~~~----~~~----~~~~~~~~~~vi~~D~~G~G~S~~~~--~~~ 84 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGIS----PHH----RQLFDPERYKVLLFDQRGCGRSRPHA--SLD 84 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCC----GGG----GGGSCTTTEEEEEECCTTSTTCBSTT--CCT
T ss_pred eeeEEEcCCCcEEEEEEcCCCCCCcEEEECCCCCcccc----hhh----hhhccccCCeEEEECCCCCCCCCCCc--ccc
Confidence 4567777 566999999997677889999998765421 112 2333 468999999999999996432 123
Q ss_pred cccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
.++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++....
T Consensus 85 ~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 142 (317)
T 1wm1_A 85 NNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLR 142 (317)
T ss_dssp TCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred cccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCc
Confidence 5789999999999999999999999999999999999999999999999999876543
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=219.42 Aligned_cols=237 Identities=14% Similarity=0.128 Sum_probs=145.5
Q ss_pred eEEEEeccCCCCC-eEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHH
Q 022316 31 SLSVTIYGDQDKP-ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (299)
Q Consensus 31 ~l~~~~~g~~~~p-~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 109 (299)
+++|...| ++| +|||+||++.++.. |.+. .+.|.++|+|+++|+||||.|..+ ..++++++++++
T Consensus 3 ~l~~~~~G--~g~~~vvllHG~~~~~~~------w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~-----~~~~~~~~~~~l 68 (258)
T 1m33_A 3 NIWWQTKG--QGNVHLVLLHGWGLNAEV------WRCI-DEELSSHFTLHLVDLPGFGRSRGF-----GALSLADMAEAV 68 (258)
T ss_dssp CCCEEEEC--CCSSEEEEECCTTCCGGG------GGGT-HHHHHTTSEEEEECCTTSTTCCSC-----CCCCHHHHHHHH
T ss_pred ceEEEEec--CCCCeEEEECCCCCChHH------HHHH-HHHhhcCcEEEEeeCCCCCCCCCC-----CCcCHHHHHHHH
Confidence 57788888 467 89999999988744 7444 566778999999999999999653 247888888766
Q ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH--hhhhhhhHHhhcchhHHHHHHHH
Q 022316 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY--NKVMSNLLYYYGMCGVVKELLLK 187 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 187 (299)
. +.++ ++++|+||||||.+|+.+|.++|++|+++|++++.+.......|.. ......+... ..... .....
T Consensus 69 ~---~~l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~ 141 (258)
T 1m33_A 69 L---QQAP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQ--LSDDQ-QRTVE 141 (258)
T ss_dssp H---TTSC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHH--HHHHH-HHHHH
T ss_pred H---HHhC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHH--HhccH-HHHHH
Confidence 4 4455 8999999999999999999999999999999997654321111100 0000000000 00000 01111
Q ss_pred hhhccccccCCCCCchHHHHHHHHhhhccccc---chHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHH
Q 022316 188 RYFSKEVRGNAQVPESDIVQACRRLLDERQSS---NVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 262 (299)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~ 262 (299)
.++....... .......+.+.......... .+......+.. .+....+.++++|+++|+|++|.++ +..+.+
T Consensus 142 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~ 218 (258)
T 1m33_A 142 RFLALQTMGT--ETARQDARALKKTVLALPMPEVDVLNGGLEILKT-VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML 218 (258)
T ss_dssp HHHHTTSTTS--TTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHH-CCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-C
T ss_pred HHHHHHhcCC--ccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHh-CCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHH
Confidence 2221111000 00122223333222221111 12222222211 3455667889999999999999987 445556
Q ss_pred hhhccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 263 TSKIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
.+.+++ +++++++++||.++.|-.+.++.
T Consensus 219 ~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~ 247 (258)
T 1m33_A 219 DKLWPH--SESYIFAKAAHAPFISHPAEFCH 247 (258)
T ss_dssp TTTCTT--CEEEEETTCCSCHHHHSHHHHHH
T ss_pred HHhCcc--ceEEEeCCCCCCccccCHHHHHH
Confidence 666654 78999999999998875555443
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=219.99 Aligned_cols=261 Identities=12% Similarity=0.052 Sum_probs=161.9
Q ss_pred CCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC-CCC
Q 022316 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DEP 98 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-~~~ 98 (299)
.+.+.+++++.+++|...| ++|+|||+||++.++.. |.. +.+.+.++|+|+++|+||||.|..+... ...
T Consensus 5 ~~~~~~~~~~~~~~~~~~g--~g~~~vllHG~~~~~~~------w~~-~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~ 75 (291)
T 3qyj_A 5 FEQTIVDTTEARINLVKAG--HGAPLLLLHGYPQTHVM------WHK-IAPLLANNFTVVATDLRGYGDSSRPASVPHHI 75 (291)
T ss_dssp CEEEEEECSSCEEEEEEEC--CSSEEEEECCTTCCGGG------GTT-THHHHTTTSEEEEECCTTSTTSCCCCCCGGGG
T ss_pred cceeEEecCCeEEEEEEcC--CCCeEEEECCCCCCHHH------HHH-HHHHHhCCCEEEEEcCCCCCCCCCCCCCcccc
Confidence 3557888999999999998 67899999999988754 744 4667788999999999999999754221 112
Q ss_pred cccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH---HHHhhhhhhhH--H
Q 022316 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---WLYNKVMSNLL--Y 173 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~--~ 173 (299)
.++.+++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.+....... ........... .
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3qyj_A 76 NYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQ 155 (291)
T ss_dssp GGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTC
T ss_pred ccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhcc
Confidence 489999999999999999999999999999999999999999999999999987542211000 00000000000 0
Q ss_pred hh--------cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhccc-ccchHHHHHhhcC---CCChhhhhccc
Q 022316 174 YY--------GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAING---RPDISEGLRKL 241 (299)
Q Consensus 174 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~i 241 (299)
.. ..........+..+... ... ..++..+.+.+.+.... .......++.... ..+....+.+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 230 (291)
T 3qyj_A 156 PDNLPETLIGANPEYYLRKCLEKWGKD-FSA----FHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKI 230 (291)
T ss_dssp STTHHHHHHHTCHHHHHHHHHHHHCSC-GGG----SCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCB
T ss_pred CCCchHHHHcCCHHHHHHHHHHhcCCC-ccc----CCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCCcc
Confidence 00 00000001111111111 000 12444444444332210 0111111111111 01112346789
Q ss_pred cccEEEEecCCCcch---hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 242 QCRSLIFVGESSPFH---SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 242 ~~P~lii~G~~D~~~---~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
+||+|+|+|++|.+. .......+..+ +....+++ +||.++.|-++.++..+..
T Consensus 231 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~-~GH~~~~E~P~~v~~~i~~ 286 (291)
T 3qyj_A 231 SCPVLVLWGEKGIIGRKYDVLATWRERAI--DVSGQSLP-CGHFLPEEAPEETYQAIYN 286 (291)
T ss_dssp CSCEEEEEETTSSHHHHSCHHHHHHTTBS--SEEEEEES-SSSCHHHHSHHHHHHHHHH
T ss_pred ccceEEEecccccccchhhHHHHHHhhcC--Ccceeecc-CCCCchhhCHHHHHHHHHH
Confidence 999999999999764 12233333332 36667775 9999999877777655544
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=222.82 Aligned_cols=258 Identities=14% Similarity=0.123 Sum_probs=169.2
Q ss_pred CCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
.+++.+++++++++|...| +++|+|||+||++.+... |.+.+..++.+||+|+++|+||||.|..+.. ....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~~vv~lHG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~ 74 (279)
T 4g9e_A 3 INYHELETSHGRIAVRESE-GEGAPLLMIHGNSSSGAI------FAPQLEGEIGKKWRVIAPDLPGHGKSTDAID-PDRS 74 (279)
T ss_dssp CEEEEEEETTEEEEEEECC-CCEEEEEEECCTTCCGGG------GHHHHHSHHHHHEEEEEECCTTSTTSCCCSC-HHHH
T ss_pred eEEEEEEcCCceEEEEecC-CCCCeEEEECCCCCchhH------HHHHHhHHHhcCCeEEeecCCCCCCCCCCCC-cccC
Confidence 3567889999999999987 467899999999988744 6455445577899999999999999965321 1235
Q ss_pred ccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhh-hHHhhcch
Q 022316 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN-LLYYYGMC 178 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 178 (299)
++++++++++.++++.++.++++|+||||||.+++.+|.++|+ +.++|+++++................. ........
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T 4g9e_A 75 YSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFS 153 (279)
T ss_dssp SSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCccccc
Confidence 7999999999999999999999999999999999999999998 899999998776543322111000000 00011111
Q ss_pred hHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--
Q 022316 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-- 256 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~-- 256 (299)
..........++.... .+...+.+...... ............ ...+....+.++++|+|+|+|++|.++
T Consensus 154 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 224 (279)
T 4g9e_A 154 ERDVESYARSTCGEPF-------EASLLDIVARTDGR-ARRIMFEKFGSG-TGGNQRDIVAEAQLPIAVVNGRDEPFVEL 224 (279)
T ss_dssp HHHHHHHHHHHHCSSC-------CHHHHHHHHHSCHH-HHHHHHHHHHHT-CBCCHHHHHHHCCSCEEEEEETTCSSBCH
T ss_pred HHHHHHHHHhhccCcc-------cHHHHHHHHhhhcc-chHHHHHHhhcc-CCchHHHHHHhcCCCEEEEEcCCCcccch
Confidence 1111222233332221 12222222221110 111111112221 124666778899999999999999998
Q ss_pred hhhHHHh-hhccccCceEEEEcCchhhhHhHHHHH----HHHhhhh
Q 022316 257 SEAVHMT-SKIDRRYSALVEVWTRVYISLLGFLVL----LASFCES 297 (299)
Q Consensus 257 ~~~~~~~-~~~~~~~~~~~~~~~~~H~~~~~f~~~----~~~~~~~ 297 (299)
+....+. +.+++ +++++++++||.++.+-.+. +..|+++
T Consensus 225 ~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (279)
T 4g9e_A 225 DFVSKVKFGNLWE--GKTHVIDNAGHAPFREAPAEFDAYLARFIRD 268 (279)
T ss_dssp HHHTTCCCSSBGG--GSCEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCC--CeEEEECCCCcchHHhCHHHHHHHHHHHHHH
Confidence 4455555 44443 88999999999988775554 4455543
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-32 Score=213.82 Aligned_cols=246 Identities=14% Similarity=0.140 Sum_probs=162.2
Q ss_pred ceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccH
Q 022316 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (299)
+++..++.+++|...| ++|+|||+||++.+... | ..+.+.+.+||+|+++|+||||.|..+ ..+++
T Consensus 6 ~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~------~-~~~~~~l~~~~~vi~~d~~G~G~S~~~-----~~~~~ 71 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSG--SGPPVVLVGGALSTRAG------G-APLAERLAPHFTVICYDRRGRGDSGDT-----PPYAV 71 (262)
T ss_dssp EEECTTSCEEEEEEEE--CSSEEEEECCTTCCGGG------G-HHHHHHHTTTSEEEEECCTTSTTCCCC-----SSCCH
T ss_pred eEEcCCCcEEEEEEcC--CCCcEEEECCCCcChHH------H-HHHHHHHhcCcEEEEEecCCCcCCCCC-----CCCCH
Confidence 4556678899999999 57899999999888744 6 344566679999999999999999643 25899
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH---HHHhhhhhhhHHhhcchh
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---WLYNKVMSNLLYYYGMCG 179 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 179 (299)
+++++|+.++++.++ ++++++||||||.+++.+|.++| +|+++|++++......... ......+...+.......
T Consensus 72 ~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (262)
T 3r0v_A 72 EREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGD 149 (262)
T ss_dssp HHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhh
Confidence 999999999999999 99999999999999999999999 9999999998776532211 000011111111111111
Q ss_pred HHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhc----ccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcc
Q 022316 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE----RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 255 (299)
....++..... . .++..+.+...... .................+....+.++++|+++|+|++|.+
T Consensus 150 -----~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 219 (262)
T 3r0v_A 150 -----AVTYFMTEGVG-V----PPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPA 219 (262)
T ss_dssp -----HHHHHHHHTSC-C----CHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCH
T ss_pred -----HHHHHhhcccC-C----CHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCC
Confidence 11222221110 0 23333333321110 0001111111112222344577889999999999999999
Q ss_pred h--hhhHHHhhhccccCceEEEEcCchhhhHh-HHHHHHHHhhh
Q 022316 256 H--SEAVHMTSKIDRRYSALVEVWTRVYISLL-GFLVLLASFCE 296 (299)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~f~~~~~~~~~ 296 (299)
+ +....+.+.+++ +++++++++||..-- ++.+.+..|++
T Consensus 220 ~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 220 WIRHTAQELADTIPN--ARYVTLENQTHTVAPDAIAPVLVEFFT 261 (262)
T ss_dssp HHHHHHHHHHHHSTT--EEEEECCCSSSSCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhCCC--CeEEEecCCCcccCHHHHHHHHHHHHh
Confidence 7 667777777755 889999999994322 24455556654
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=214.70 Aligned_cols=232 Identities=14% Similarity=0.101 Sum_probs=141.4
Q ss_pred eccCCCC--CeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHH
Q 022316 36 IYGDQDK--PALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV 112 (299)
Q Consensus 36 ~~g~~~~--p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~ 112 (299)
.+|+++. |+|||+||++.++.. |.+. .+.|. ++|+|+++|+||||.|... ..++++++++++.++
T Consensus 8 ~~g~~~~~~~~vvllHG~~~~~~~------w~~~-~~~L~~~~~~vi~~Dl~GhG~S~~~-----~~~~~~~~a~~l~~~ 75 (264)
T 1r3d_A 8 HFAKPTARTPLVVLVHGLLGSGAD------WQPV-LSHLARTQCAALTLDLPGHGTNPER-----HCDNFAEAVEMIEQT 75 (264)
T ss_dssp ESSCCBTTBCEEEEECCTTCCGGG------GHHH-HHHHTTSSCEEEEECCTTCSSCC------------CHHHHHHHHH
T ss_pred ccCCCCCCCCcEEEEcCCCCCHHH------HHHH-HHHhcccCceEEEecCCCCCCCCCC-----CccCHHHHHHHHHHH
Confidence 4565443 899999999988855 7444 56666 7999999999999999642 136899999999999
Q ss_pred HHhcCCCc--EEEEeeCccHHHHHH---HHHHccCcccEEEEecCCCCCcchhHHHHhhh----hhhhHHhhcchhHHHH
Q 022316 113 LNHFGLGA--VMCMGVTAGAYILTL---FAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV----MSNLLYYYGMCGVVKE 183 (299)
Q Consensus 113 l~~l~~~~--~~lvG~S~Gg~va~~---~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 183 (299)
++.++.++ ++|+||||||.+++. +|.++|++|+++|++++............... ....+.... . .
T Consensus 76 l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~ 150 (264)
T 1r3d_A 76 VQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQP----I-E 150 (264)
T ss_dssp HHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSC----H-H
T ss_pred HHHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhcccc----H-H
Confidence 99999877 999999999999999 88899999999999987655432221110000 000000000 0 1
Q ss_pred HHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhh--cCCCChhhhhccccccEEEEecCCCcchhhhHH
Q 022316 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSEAVH 261 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~ 261 (299)
.....++........ .++..+.+................... ....+..+.+.++++|+|+|+|++|..+. .
T Consensus 151 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~---~ 224 (264)
T 1r3d_A 151 HVLSDWYQQAVFSSL---NHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ---Q 224 (264)
T ss_dssp HHHHHHTTSGGGTTC---CHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH---H
T ss_pred HHHHHHhhhhhhhcc---CHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH---H
Confidence 122222221111110 122222222222111111122222211 11235566788999999999999998762 2
Q ss_pred HhhhccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 262 MTSKIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
+.+.+. .++++++++||.++.|-++.++.
T Consensus 225 ~~~~~~---~~~~~i~~~gH~~~~e~p~~~~~ 253 (264)
T 1r3d_A 225 LAESSG---LSYSQVAQAGHNVHHEQPQAFAK 253 (264)
T ss_dssp HHHHHC---SEEEEETTCCSCHHHHCHHHHHH
T ss_pred HHHHhC---CcEEEcCCCCCchhhcCHHHHHH
Confidence 222232 56899999999999875555443
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=217.93 Aligned_cols=255 Identities=11% Similarity=0.064 Sum_probs=163.7
Q ss_pred CcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
+..+++.++.+++|...| ++|+|||+||++.+... |.+. .+.+.++|+|+++|+||||.|..+.......+
T Consensus 9 ~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~------~~~~-~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 79 (297)
T 2qvb_A 9 QPKYLEIAGKRMAYIDEG--KGDAIVFQHGNPTSSYL------WRNI-MPHLEGLGRLVACDLIGMGASDKLSPSGPDRY 79 (297)
T ss_dssp CCEEEEETTEEEEEEEES--SSSEEEEECCTTCCGGG------GTTT-GGGGTTSSEEEEECCTTSTTSCCCSSCSTTSS
T ss_pred CceEEEECCEEEEEEecC--CCCeEEEECCCCchHHH------HHHH-HHHHhhcCeEEEEcCCCCCCCCCCCCccccCc
Confidence 456788899999999999 47999999999987744 6444 56677789999999999999965422112238
Q ss_pred cHHHHHHHHHHHHHhcCC-CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHH--HhhhhhhhHHhhcc
Q 022316 101 SVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL--YNKVMSNLLYYYGM 177 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 177 (299)
+++++++++.++++.++. ++++++||||||.+++.+|.++|++|+++|++++......+.... ....+... .....
T Consensus 80 ~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 158 (297)
T 2qvb_A 80 SYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGF-RSPQG 158 (297)
T ss_dssp CHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHH-TSTTH
T ss_pred CHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHH-hcccc
Confidence 999999999999999999 999999999999999999999999999999999876532211100 00000000 00000
Q ss_pred hhHH--HHHHHHhhhccccccCCCCCchHHHHHHHHhhhc--ccccchHHHHHhhcC----------CCChhhhhccccc
Q 022316 178 CGVV--KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE--RQSSNVWHFLEAING----------RPDISEGLRKLQC 243 (299)
Q Consensus 178 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~ 243 (299)
.... ....+..++....... ..++..+.+...+.. ............+.. ..+....+.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 235 (297)
T 2qvb_A 159 EPMALEHNIFVERVLPGAILRQ---LSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDM 235 (297)
T ss_dssp HHHHHTTCHHHHTHHHHTCSSC---CCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCS
T ss_pred hhhhccccHHHHHHHhcccccc---CCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccc
Confidence 0000 0011122221111100 023333333332222 111222222222210 0234456788999
Q ss_pred cEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHH
Q 022316 244 RSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLA 292 (299)
Q Consensus 244 P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~ 292 (299)
|+|+|+|++|.++ +..+.+.+.+++ +++++ ++||.++.+..+.++
T Consensus 236 P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~-~~gH~~~~~~p~~~~ 282 (297)
T 2qvb_A 236 PKLFINAEPGAIITGRIRDYVRSWPNQ---TEITV-PGVHFVQEDSPEEIG 282 (297)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHTSSSE---EEEEE-EESSCGGGTCHHHHH
T ss_pred cEEEEecCCCCcCCHHHHHHHHHHcCC---eEEEe-cCccchhhhCHHHHH
Confidence 9999999999997 566667776654 78888 999998876554443
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-32 Score=217.47 Aligned_cols=255 Identities=8% Similarity=0.017 Sum_probs=162.7
Q ss_pred cceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
..++..++.+++|...| ++|+|||+||++.+... |... ...|.++|+|+++|+||||.|..+.......++
T Consensus 11 ~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~------~~~~-~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 81 (302)
T 1mj5_A 11 KKFIEIKGRRMAYIDEG--TGDPILFQHGNPTSSYL------WRNI-MPHCAGLGRLIACDLIGMGDSDKLDPSGPERYA 81 (302)
T ss_dssp CEEEEETTEEEEEEEES--CSSEEEEECCTTCCGGG------GTTT-GGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSC
T ss_pred ceEEEECCEEEEEEEcC--CCCEEEEECCCCCchhh------hHHH-HHHhccCCeEEEEcCCCCCCCCCCCCCCccccc
Confidence 45778888999999999 47899999999987744 6444 566777799999999999999754221223389
Q ss_pred HHHHHHHHHHHHHhcCC-CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHH--HhhhhhhhHHhhcch
Q 022316 102 VDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL--YNKVMSNLLYYYGMC 178 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 178 (299)
++++++++.++++.++. ++++|+||||||.+++.+|.++|++|+++|++++......+.... ....+... .... .
T Consensus 82 ~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~ 159 (302)
T 1mj5_A 82 YAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAF-RSQA-G 159 (302)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHH-HSTT-H
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHH-hccc-h
Confidence 99999999999999999 999999999999999999999999999999999876532211100 00000000 0000 0
Q ss_pred hHH---HHHHHHhhhccccccCCCCCchHHHHHHHHhhhc--ccccchHHHHHhhcC----------CCChhhhhccccc
Q 022316 179 GVV---KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE--RQSSNVWHFLEAING----------RPDISEGLRKLQC 243 (299)
Q Consensus 179 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~ 243 (299)
... ....+..++....... ..++....+...+.. ............+.. ..+....+.++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 236 (302)
T 1mj5_A 160 EELVLQDNVFVEQVLPGLILRP---LSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPI 236 (302)
T ss_dssp HHHHTTTCHHHHTHHHHTSSSC---CCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCS
T ss_pred hhhhcChHHHHHHHHHhcCccc---CCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCC
Confidence 000 0011122221111000 023333333332221 111112222121110 0133456788999
Q ss_pred cEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHh
Q 022316 244 RSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASF 294 (299)
Q Consensus 244 P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~ 294 (299)
|+|+|+|++|.++ +..+.+.+.+++ +++++ ++||.++.+..+.++..
T Consensus 237 P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~-~~gH~~~~e~p~~~~~~ 285 (302)
T 1mj5_A 237 PKLFINAEPGALTTGRMRDFCRTWPNQ---TEITV-AGAHFIQEDSPDEIGAA 285 (302)
T ss_dssp CEEEEEEEECSSSSHHHHHHHTTCSSE---EEEEE-EESSCGGGTCHHHHHHH
T ss_pred CeEEEEeCCCCCCChHHHHHHHHhcCC---ceEEe-cCcCcccccCHHHHHHH
Confidence 9999999999998 556666666653 78888 99999887655554433
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-33 Score=219.40 Aligned_cols=243 Identities=13% Similarity=0.119 Sum_probs=157.4
Q ss_pred eeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccC--ceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
.+++++.+++|...| ++|+|||+||++.+... |.+.+.. +.+ ||+|+++|+||||.|..+. . ++
T Consensus 5 ~~~~~g~~l~y~~~g--~~~~vv~lhG~~~~~~~------~~~~~~~-l~~~~g~~v~~~d~~G~G~s~~~~----~-~~ 70 (272)
T 3fsg_A 5 KEYLTRSNISYFSIG--SGTPIIFLHGLSLDKQS------TCLFFEP-LSNVGQYQRIYLDLPGMGNSDPIS----P-ST 70 (272)
T ss_dssp CCEECTTCCEEEEEC--CSSEEEEECCTTCCHHH------HHHHHTT-STTSTTSEEEEECCTTSTTCCCCS----S-CS
T ss_pred EEEecCCeEEEEEcC--CCCeEEEEeCCCCcHHH------HHHHHHH-HhccCceEEEEecCCCCCCCCCCC----C-CC
Confidence 467889999999999 67899999999988755 5444444 554 9999999999999996432 1 89
Q ss_pred HHHHHHHHHHHHHh-cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhh---hhhHHhhcc
Q 022316 102 VDDLADQIAEVLNH-FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM---SNLLYYYGM 177 (299)
Q Consensus 102 ~~~~~~~l~~~l~~-l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 177 (299)
++++++++.++++. ++.++++|+||||||.+|+.+|.++|++|+++|+++|................ .... ...
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 148 (272)
T 3fsg_A 71 SDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDIN--PVE 148 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCC--CCT
T ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhh--ccc
Confidence 99999999999999 88899999999999999999999999999999999987644321110000000 0000 000
Q ss_pred hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcc---cccchHHHHHhhcC-CCChhhhhccccccEEEEecCCC
Q 022316 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER---QSSNVWHFLEAING-RPDISEGLRKLQCRSLIFVGESS 253 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~lii~G~~D 253 (299)
............... .+.....+....... ....+...+..... ..+....+.++++|+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 219 (272)
T 3fsg_A 149 NKEYFADFLSMNVII---------NNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRND 219 (272)
T ss_dssp TGGGHHHHHHHCSEE---------SHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTC
T ss_pred CHHHHHHHHHHhccC---------CCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCC
Confidence 000001111111110 122222222211111 11111111111111 11222245889999999999999
Q ss_pred cch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 254 PFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 254 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
.++ +....+.+.+++ +++++++++||..+.+-.+.++.
T Consensus 220 ~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~ 259 (272)
T 3fsg_A 220 QVVGYQEQLKLINHNEN--GEIVLLNRTGHNLMIDQREAVGF 259 (272)
T ss_dssp TTTCSHHHHHHHTTCTT--EEEEEESSCCSSHHHHTHHHHHH
T ss_pred CcCCHHHHHHHHHhcCC--CeEEEecCCCCCchhcCHHHHHH
Confidence 997 667777777754 89999999999998875555443
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-31 Score=214.02 Aligned_cols=250 Identities=16% Similarity=0.091 Sum_probs=166.8
Q ss_pred CCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
.+.+.++.++.+++|...|+ +|+||++||++.+... | ..+...+.++|+|+++|+||+|.|..+ ...
T Consensus 48 ~~~~~~~~~~~~~~~~~~g~--~p~vv~lhG~~~~~~~------~-~~~~~~L~~~~~v~~~D~~G~G~S~~~----~~~ 114 (314)
T 3kxp_A 48 FISRRVDIGRITLNVREKGS--GPLMLFFHGITSNSAV------F-EPLMIRLSDRFTTIAVDQRGHGLSDKP----ETG 114 (314)
T ss_dssp CEEEEEECSSCEEEEEEECC--SSEEEEECCTTCCGGG------G-HHHHHTTTTTSEEEEECCTTSTTSCCC----SSC
T ss_pred cceeeEEECCEEEEEEecCC--CCEEEEECCCCCCHHH------H-HHHHHHHHcCCeEEEEeCCCcCCCCCC----CCC
Confidence 35667888899999999984 8899999999877644 5 344566777899999999999999632 235
Q ss_pred ccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchh
Q 022316 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
++++++++++..+++.++.++++|+||||||.+++.+|.++|++|+++|++++.+.........................
T Consensus 115 ~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (314)
T 3kxp_A 115 YEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIK 194 (314)
T ss_dssp CSHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHH
Confidence 89999999999999999999999999999999999999999999999999998776543322111111110000000011
Q ss_pred HHHHHHHHhhhccccccCCCCCchHHHHHHHHh-hhccc-------ccchHHHHHhhcCCCChhhhhccccccEEEEecC
Q 022316 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRL-LDERQ-------SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 251 (299)
.... .....+.. . ..+....+... +.... ............. .+....+.++++|+|+|+|+
T Consensus 195 ~~~~-~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~Lii~G~ 264 (314)
T 3kxp_A 195 AVEA-YLAGRYPN----I----PADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLR-SDLVPAYRDVTKPVLIVRGE 264 (314)
T ss_dssp HHHH-HHHHHSTT----S----CHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTT-SCCHHHHHHCCSCEEEEEET
T ss_pred HHHH-HHHhhccc----C----chHHHHHHhhhhhcccccccccccChhhhhhhccccC-cchhhHhhcCCCCEEEEecC
Confidence 1101 11111110 0 12222222221 11100 0001111111111 25667788999999999999
Q ss_pred CCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHh
Q 022316 252 SSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASF 294 (299)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~ 294 (299)
+|.++ +...++.+.+++ ++++++|++||..+.+..+.+...
T Consensus 265 ~D~~~~~~~~~~~~~~~~~--~~~~~~~g~gH~~~~e~~~~~~~~ 307 (314)
T 3kxp_A 265 SSKLVSAAALAKTSRLRPD--LPVVVVPGADHYVNEVSPEITLKA 307 (314)
T ss_dssp TCSSSCHHHHHHHHHHCTT--SCEEEETTCCSCHHHHCHHHHHHH
T ss_pred CCccCCHHHHHHHHHhCCC--ceEEEcCCCCCcchhhCHHHHHHH
Confidence 99987 667777777754 889999999999988755544433
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=216.28 Aligned_cols=247 Identities=14% Similarity=0.109 Sum_probs=166.6
Q ss_pred eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH
Q 022316 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (299)
Q Consensus 31 ~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~ 110 (299)
+++|...|+ ++|+|||+||++.+... |... .+.+.+||+|+++|+||||.|..+........+++++++++.
T Consensus 18 ~~~~~~~g~-~~~~vv~lHG~~~~~~~------~~~~-~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 89 (282)
T 3qvm_A 18 RNNINITGG-GEKTVLLAHGFGCDQNM------WRFM-LPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVE 89 (282)
T ss_dssp HTTCEEEEC-SSCEEEEECCTTCCGGG------GTTT-HHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHH
T ss_pred hcceeecCC-CCCeEEEECCCCCCcch------HHHH-HHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHH
Confidence 455777773 34899999999888743 6444 566667999999999999999764322224459999999999
Q ss_pred HHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh-------HHHHhhhhhhhHHhhcchhHHHH
Q 022316 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT-------EWLYNKVMSNLLYYYGMCGVVKE 183 (299)
Q Consensus 111 ~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 183 (299)
++++.++.++++|+||||||.+++.+|.++|++|+++|++++........ ............. ....... .
T Consensus 90 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~ 167 (282)
T 3qvm_A 90 EILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMD-KNYIGWA-N 167 (282)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHH-HCHHHHH-H
T ss_pred HHHHHcCCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHh-cchhhHH-H
Confidence 99999999999999999999999999999999999999999876543211 0000000000000 0001111 1
Q ss_pred HHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHH
Q 022316 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 261 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~ 261 (299)
......+.... .+...+.+...+..........+...... .+....+.++++|+++|+|++|.++ +....
T Consensus 168 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 239 (282)
T 3qvm_A 168 YLAPLVMGASH-------SSELIGELSGSFCTTDPIVAKTFAKATFF-SDYRSLLEDISTPALIFQSAKDSLASPEVGQY 239 (282)
T ss_dssp HHHHHHHCTTS-------CHHHHHHHHHHHHHSCHHHHHHHHHHHHS-CBCGGGGGGCCSCEEEEEEEECTTCCHHHHHH
T ss_pred HHHhhccCCcc-------chhhHHHHHHHHhcCCcHHHHHHHHHHhc-ccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHH
Confidence 11222222111 34555555554444444444444444333 4666778999999999999999997 66777
Q ss_pred HhhhccccCceEEEEcCchhhhHhHHHHH----HHHhhhh
Q 022316 262 MTSKIDRRYSALVEVWTRVYISLLGFLVL----LASFCES 297 (299)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~H~~~~~f~~~----~~~~~~~ 297 (299)
+.+.+++ .++++++++||..+.+..+. +..|+++
T Consensus 240 ~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 277 (282)
T 3qvm_A 240 MAENIPN--SQLELIQAEGHCLHMTDAGLITPLLIHFIQN 277 (282)
T ss_dssp HHHHSSS--EEEEEEEEESSCHHHHCHHHHHHHHHHHHHH
T ss_pred HHHhCCC--CcEEEecCCCCcccccCHHHHHHHHHHHHHh
Confidence 7777754 79999999999988765544 4555543
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=221.91 Aligned_cols=254 Identities=15% Similarity=0.074 Sum_probs=158.6
Q ss_pred ceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccH
Q 022316 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (299)
....+++++++|..+|+ ++|+|||+||++.+... |... ...+ ||+|+++|+||||.|.... ...+++
T Consensus 63 ~~~~~~~~~~~~~~~g~-~~~~vv~~hG~~~~~~~------~~~~-~~~l--g~~Vi~~D~~G~G~S~~~~---~~~~~~ 129 (330)
T 3p2m_A 63 EVERVQAGAISALRWGG-SAPRVIFLHGGGQNAHT------WDTV-IVGL--GEPALAVDLPGHGHSAWRE---DGNYSP 129 (330)
T ss_dssp CEEEEEETTEEEEEESS-SCCSEEEECCTTCCGGG------GHHH-HHHS--CCCEEEECCTTSTTSCCCS---SCBCCH
T ss_pred CceeecCceEEEEEeCC-CCCeEEEECCCCCccch------HHHH-HHHc--CCeEEEEcCCCCCCCCCCC---CCCCCH
Confidence 45556788999999994 47889999999988754 6444 3444 8999999999999997432 245899
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhh--hhhhhHHhhcchhH
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK--VMSNLLYYYGMCGV 180 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 180 (299)
+++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.+............ ..............
T Consensus 130 ~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (330)
T 3p2m_A 130 QLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPS 209 (330)
T ss_dssp HHHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSC
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccC
Confidence 9999999999999999999999999999999999999999999999999864322111110000 00000000000000
Q ss_pred HHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCC---ChhhhhccccccEEEEecCCCcch-
Q 022316 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRP---DISEGLRKLQCRSLIFVGESSPFH- 256 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~P~lii~G~~D~~~- 256 (299)
. ............... .....+.+...........+......+.... +..+.+.++++|+|+|+|++|.++
T Consensus 210 ~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~ 284 (330)
T 3p2m_A 210 F-QAMLDLTIAAAPHRD----VKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVT 284 (330)
T ss_dssp H-HHHHHHHHHHCTTSC----HHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSC
T ss_pred H-HHHHHHHHhcCCCCC----HHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCC
Confidence 0 001111111110000 1122222221111111111111111111111 123467889999999999999998
Q ss_pred -hhhHHHhhhccccCce-EEEEcCchhhhHhHHHHHHHHhhh
Q 022316 257 -SEAVHMTSKIDRRYSA-LVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 257 -~~~~~~~~~~~~~~~~-~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
+.++.+.+.+++ .+ +++++++||..+.+..+.++..+.
T Consensus 285 ~~~~~~l~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~ 324 (330)
T 3p2m_A 285 DQDTAELHRRATH--FRGVHIVEKSGHSVQSDQPRALIEIVR 324 (330)
T ss_dssp HHHHHHHHHHCSS--EEEEEEETTCCSCHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHhCCC--CeeEEEeCCCCCCcchhCHHHHHHHHH
Confidence 667777777765 77 999999999998876655544433
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=211.22 Aligned_cols=232 Identities=13% Similarity=0.113 Sum_probs=140.6
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC-
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG- 117 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~- 117 (299)
+++|+|||+||++.++.. |.+. .+.| .+||+|+++|+||||.|+.+. ...++++++++|+.+++++++
T Consensus 8 ~~g~~vvllHG~~~~~~~------w~~~-~~~L~~~g~~via~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~ 77 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAWI------WYKL-KPLLESAGHKVTAVDLSAAGINPRRL---DEIHTFRDYSEPLMEVMASIPP 77 (264)
T ss_dssp -CCCEEEEECCTTCCGGG------GTTH-HHHHHHTTCEEEEECCTTSTTCSCCG---GGCCSHHHHHHHHHHHHHHSCT
T ss_pred CCCCeEEEECCCccccch------HHHH-HHHHHhCCCEEEEeecCCCCCCCCCc---ccccCHHHHHHHHHHHHHHhCC
Confidence 367899999999877644 7555 4555 579999999999999996421 124799999999999999997
Q ss_pred CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc--chhHHHHhhhhhhh-----HHh----hc------chhH
Q 022316 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP--SWTEWLYNKVMSNL-----LYY----YG------MCGV 180 (299)
Q Consensus 118 ~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~--~~~~~~~~~~~~~~-----~~~----~~------~~~~ 180 (299)
.++++|+||||||.+++.+|.++|++|+++|++++..... ....... ...... ... .. ....
T Consensus 78 ~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
T 2wfl_A 78 DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFE-KYNEKCPADMMLDSQFSTYGNPENPGMSMI 156 (264)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHH-HHHHHSCTTTTTTCEEEEESCTTSCEEEEE
T ss_pred CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHH-HhhhcCcchhhhhhhhhhccCCCCCcchhh
Confidence 5899999999999999999999999999999999753221 1111000 000000 000 00 0000
Q ss_pred HHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hh
Q 022316 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 258 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~ 258 (299)
.........+.... ..+... +......... .....+ ....... .....++|+|+|+|++|.++ +.
T Consensus 157 ~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~-~~~~~~---~~~~~~~-~~~~~~~P~l~i~G~~D~~~~~~~ 223 (264)
T 2wfl_A 157 LGPQFMALKMFQNC-------SVEDLE-LAKMLTRPGS-LFFQDL---AKAKKFS-TERYGSVKRAYIFCNEDKSFPVEF 223 (264)
T ss_dssp CCHHHHHHHTSTTS-------CHHHHH-HHHHHCCCEE-CCHHHH---TTSCCCC-TTTGGGSCEEEEEETTCSSSCHHH
T ss_pred hhHHHHHHHHhcCC-------CHHHHH-HHHhccCCCc-cccccc---ccccccC-hHHhCCCCeEEEEeCCcCCCCHHH
Confidence 00000010000000 011111 1111111100 011111 0001111 01124789999999999987 55
Q ss_pred hHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 259 AVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
.+.+.+.+++ ++++++|++||.++.|-++.++..+..
T Consensus 224 ~~~~~~~~p~--~~~~~i~~~gH~~~~e~P~~~~~~l~~ 260 (264)
T 2wfl_A 224 QKWFVESVGA--DKVKEIKEADHMGMLSQPREVCKCLLD 260 (264)
T ss_dssp HHHHHHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred HHHHHHhCCC--ceEEEeCCCCCchhhcCHHHHHHHHHH
Confidence 6667777764 899999999999999877777665544
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=221.83 Aligned_cols=222 Identities=10% Similarity=0.096 Sum_probs=146.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc--CC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF--GL 118 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l--~~ 118 (299)
+++.|||+||++.+... |...+..+...||+|+++|+||||.|..+. ..++++++++|+.++++.+ +.
T Consensus 50 ~~~~VlllHG~~~s~~~------~~~la~~La~~Gy~Via~Dl~GhG~S~~~~----~~~~~~~~~~d~~~~~~~l~~~~ 119 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQS------MRFLAEGFARAGYTVATPRLTGHGTTPAEM----AASTASDWTADIVAAMRWLEERC 119 (281)
T ss_dssp SSEEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEECCCTTSSSCHHHH----HTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCceEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEECCCCCCCCCccc----cCCCHHHHHHHHHHHHHHHHhCC
Confidence 45579999999888754 544444444569999999999999995322 2478899999999999887 46
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA 198 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (299)
++++|+||||||.+++.+|.++|++|+++|++++............... . .. .... . .+......
T Consensus 120 ~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~----~~-~~~~-----~-~~~~~~~~-- 184 (281)
T 4fbl_A 120 DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFN--P----DA-PAEL-----P-GIGSDIKA-- 184 (281)
T ss_dssp SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTC--T----TC-CSEE-----E-CCCCCCSS--
T ss_pred CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHh--H----hh-HHhh-----h-cchhhhhh--
Confidence 8999999999999999999999999999999999876554322110000 0 00 0000 0 00000000
Q ss_pred CCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEE
Q 022316 199 QVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEV 276 (299)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~ 276 (299)
... .. ......+........... ......+++|++|+|+|+|++|.++ +.++.+.+.+++.+++++++
T Consensus 185 ----~~~-~~--~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~ 254 (281)
T 4fbl_A 185 ----EGV-KE--LAYPVTPVPAIKHLITIG---AVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWL 254 (281)
T ss_dssp ----TTC-CC--CCCSEEEGGGHHHHHHHH---HHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEE
T ss_pred ----HHH-HH--hhhccCchHHHHHHHHhh---hhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEE
Confidence 000 00 000000111111111111 1233557889999999999999998 67788888887777899999
Q ss_pred cCchhhhHhH-----HHHHHHHhhhh
Q 022316 277 WTRVYISLLG-----FLVLLASFCES 297 (299)
Q Consensus 277 ~~~~H~~~~~-----f~~~~~~~~~~ 297 (299)
|++||.++.| +.+.+.+|+++
T Consensus 255 ~~~gH~~~~e~~~e~v~~~i~~FL~~ 280 (281)
T 4fbl_A 255 ENSYHVATLDNDKELILERSLAFIRK 280 (281)
T ss_dssp SSCCSCGGGSTTHHHHHHHHHHHHHT
T ss_pred CCCCCcCccccCHHHHHHHHHHHHHh
Confidence 9999987654 56667788764
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-31 Score=204.87 Aligned_cols=234 Identities=14% Similarity=0.112 Sum_probs=161.2
Q ss_pred CceEEEEeccCC-CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHH
Q 022316 29 HGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (299)
Q Consensus 29 ~~~l~~~~~g~~-~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (299)
+.+++|...|++ ++|+|||+||++.+... |. ....+.+||+|+++|+||||.|... ..++++++++
T Consensus 2 g~~l~y~~~g~~~~~~~vv~~hG~~~~~~~------~~--~~~~l~~g~~v~~~d~~g~g~s~~~-----~~~~~~~~~~ 68 (245)
T 3e0x_A 2 NAMLHYVHVGNKKSPNTLLFVHGSGCNLKI------FG--ELEKYLEDYNCILLDLKGHGESKGQ-----CPSTVYGYID 68 (245)
T ss_dssp CCCCCEEEEECTTCSCEEEEECCTTCCGGG------GT--TGGGGCTTSEEEEECCTTSTTCCSC-----CCSSHHHHHH
T ss_pred CceeEEEecCCCCCCCEEEEEeCCcccHHH------HH--HHHHHHhCCEEEEecCCCCCCCCCC-----CCcCHHHHHH
Confidence 567889999865 67899999999888754 54 3455568999999999999999622 3479999999
Q ss_pred HHHHHH------HhcCCCcEEEEeeCccHHHHHHHHHH-ccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhH
Q 022316 108 QIAEVL------NHFGLGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (299)
Q Consensus 108 ~l~~~l------~~l~~~~~~lvG~S~Gg~va~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (299)
++.+++ +.++ +++|+||||||.+++.+|.+ +|+ |+++|++++............... ........
T Consensus 69 ~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 140 (245)
T 3e0x_A 69 NVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKI-----YHNQLDNN 140 (245)
T ss_dssp HHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHH-----HTTCCCHH
T ss_pred HHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHH-----HHHHHHhh
Confidence 999999 8888 99999999999999999999 999 999999999876632222111110 00000110
Q ss_pred HHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hh
Q 022316 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 258 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~ 258 (299)
.. .... ... .......+...+.. .+..+......... .+....+.++++|+++++|++|.++ +.
T Consensus 141 ~~----~~~~-~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 206 (245)
T 3e0x_A 141 YL----LECI-GGI-------DNPLSEKYFETLEK-DPDIMINDLIACKL-IDLVDNLKNIDIPVKAIVAKDELLTLVEY 206 (245)
T ss_dssp HH----HHHH-TCS-------CSHHHHHHHTTSCS-SHHHHHHHHHHHHH-CBCGGGGGGCCSCEEEEEETTCSSSCHHH
T ss_pred cC----cccc-ccc-------chHHHHHHHHHHhc-CcHHHHHHHHHhcc-ccHHHHHHhCCCCEEEEEeCCCCCCCHHH
Confidence 00 0000 000 11222222111111 12222222222222 4556678899999999999999998 66
Q ss_pred hHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhcC
Q 022316 259 AVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESEF 299 (299)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~~ 299 (299)
...+.+.+++ +++++++++||..+.+-.+.+...+.+++
T Consensus 207 ~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 207 SEIIKKEVEN--SELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp HHHHHHHSSS--EEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred HHHHHHHcCC--ceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 7777777754 89999999999999988888887777653
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-31 Score=211.05 Aligned_cols=230 Identities=13% Similarity=0.049 Sum_probs=138.8
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC-C
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~ 118 (299)
++|+|||+||++.++.. |.+. .+.| ..||+|+++|+||||.|+.+. ...++++++++++.++++.++ .
T Consensus 3 ~~~~vvllHG~~~~~~~------w~~~-~~~L~~~g~rVia~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~ 72 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWS------WYKL-KPLLEAAGHKVTALDLAASGTDLRKI---EELRTLYDYTLPLMELMESLSAD 72 (273)
T ss_dssp CCCEEEEECCTTCCGGG------GTTH-HHHHHHTTCEEEECCCTTSTTCCCCG---GGCCSHHHHHHHHHHHHHTSCSS
T ss_pred CCCeEEEECCCCCCcch------HHHH-HHHHHhCCCEEEEecCCCCCCCccCc---ccccCHHHHHHHHHHHHHHhccC
Confidence 46889999999877644 7555 4555 569999999999999996421 124799999999999999997 5
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcc--hhHHHHhhhhhhh-----HHh----hcc------hhHH
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS--WTEWLYNKVMSNL-----LYY----YGM------CGVV 181 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~-----~~~----~~~------~~~~ 181 (299)
++++|+||||||++++.+|.++|++|+++|++++...... ...... ...... ... ... ....
T Consensus 73 ~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T 1xkl_A 73 EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLE-QYNERTPAENWLDTQFLPYGSPEEPLTSMFF 151 (273)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHH-HHHHTSCTTTTTTCEEEECSCTTSCCEEEEC
T ss_pred CCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHH-HhhccCChhhHHHHHHhhccCCCCCcccccc
Confidence 8999999999999999999999999999999997532211 111000 000000 000 000 0000
Q ss_pred HHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhh
Q 022316 182 KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEA 259 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~ 259 (299)
........+.... ..+... +.......... ....+... . .+. .....++|+++|+|++|.++ +..
T Consensus 152 ~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~-~~~~~~~~-~--~~~-~~~~~~~P~l~i~G~~D~~~p~~~~ 218 (273)
T 1xkl_A 152 GPKFLAHKLYQLC-------SPEDLA-LASSLVRPSSL-FMEDLSKA-K--YFT-DERFGSVKRVYIVCTEDKGIPEEFQ 218 (273)
T ss_dssp CHHHHHHHTSTTS-------CHHHHH-HHHHHCCCBCC-CHHHHHHC-C--CCC-TTTGGGSCEEEEEETTCTTTTHHHH
T ss_pred CHHHHHHHhhccC-------CHHHHH-HHHHhcCCCch-hhhhhhcc-c--ccc-hhhhCCCCeEEEEeCCccCCCHHHH
Confidence 0000010000000 011111 11111111110 11111110 0 110 01124789999999999987 556
Q ss_pred HHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 260 VHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
+.+.+.+++ ++++++|++||.++.|-++.++..+.
T Consensus 219 ~~~~~~~p~--~~~~~i~~aGH~~~~e~P~~~~~~i~ 253 (273)
T 1xkl_A 219 RWQIDNIGV--TEAIEIKGADHMAMLCEPQKLCASLL 253 (273)
T ss_dssp HHHHHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred HHHHHhCCC--CeEEEeCCCCCCchhcCHHHHHHHHH
Confidence 667777765 88999999999999886666654443
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=209.50 Aligned_cols=229 Identities=12% Similarity=0.058 Sum_probs=138.7
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC-CC
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LG 119 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~ 119 (299)
+++|||+||++.++.. |... .+.| ..||+|+++|+||||.|+.+. ...++++++++|+.+++++++ .+
T Consensus 3 ~~~vvllHG~~~~~~~------w~~~-~~~L~~~g~~via~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~~ 72 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWI------WHKL-KPLLEALGHKVTALDLAASGVDPRQI---EEIGSFDEYSEPLLTFLEALPPGE 72 (257)
T ss_dssp CCEEEEECCTTCCGGG------GTTH-HHHHHHTTCEEEEECCTTSTTCSCCG---GGCCSHHHHTHHHHHHHHTSCTTC
T ss_pred CCcEEEEcCCccCcCC------HHHH-HHHHHhCCCEEEEeCCCCCCCCCCCc---ccccCHHHHHHHHHHHHHhccccC
Confidence 5789999999877644 7555 4555 468999999999999996421 124799999999999999996 58
Q ss_pred cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc--chhHHHHhhhhhhh---HHh----hc------chhHHHHH
Q 022316 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP--SWTEWLYNKVMSNL---LYY----YG------MCGVVKEL 184 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~--~~~~~~~~~~~~~~---~~~----~~------~~~~~~~~ 184 (299)
+++|+||||||.+++.+|.++|++|+++|++++..... ....... ...... ... .. ........
T Consensus 73 ~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (257)
T 3c6x_A 73 KVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVD-KLMEVFPDWKDTTYFTYTKDGKEITGLKLGFT 151 (257)
T ss_dssp CEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHH-HHHHHSCCCTTCEEEEEEETTEEEEEEECCHH
T ss_pred CeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHH-HHhhcCcchhhhhhhhccCCCCccccccccHH
Confidence 99999999999999999999999999999999853221 1111100 000000 000 00 00000000
Q ss_pred HHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHH
Q 022316 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 262 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~ 262 (299)
.....+.... ..+..+. ......... .....+..... . .... ..++|+|+|+|++|.++ +..+.+
T Consensus 152 ~~~~~~~~~~-------~~~~~~~-~~~~~~~~~-~~~~~~~~~~~-~-~~~~--~~~~P~l~i~G~~D~~~p~~~~~~~ 218 (257)
T 3c6x_A 152 LLRENLYTLC-------GPEEYEL-AKMLTRKGS-LFQNILAKRPF-F-TKEG--YGSIKKIYVWTDQDEIFLPEFQLWQ 218 (257)
T ss_dssp HHHHHTSTTS-------CHHHHHH-HHHHCCCBC-CCHHHHHHSCC-C-CTTT--GGGSCEEEEECTTCSSSCHHHHHHH
T ss_pred HHHHHHhcCC-------CHHHHHH-HHHhcCCCc-cchhhhccccc-c-Chhh--cCcccEEEEEeCCCcccCHHHHHHH
Confidence 1111110000 0111111 111111100 01111111000 0 0111 13689999999999997 556667
Q ss_pred hhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 263 TSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.+.+++ .+++++|++||.++.|-++.++..+.
T Consensus 219 ~~~~~~--~~~~~i~~~gH~~~~e~P~~~~~~l~ 250 (257)
T 3c6x_A 219 IENYKP--DKVYKVEGGDHKLQLTKTKEIAEILQ 250 (257)
T ss_dssp HHHSCC--SEEEECCSCCSCHHHHSHHHHHHHHH
T ss_pred HHHCCC--CeEEEeCCCCCCcccCCHHHHHHHHH
Confidence 777765 89999999999999987766654443
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-31 Score=208.00 Aligned_cols=219 Identities=10% Similarity=0.068 Sum_probs=139.7
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH---HHHHhc
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA---EVLNHF 116 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~---~~l~~l 116 (299)
++|+|||+||++.+... |... .+.| .+||+|+++|+||||.|..+ ...++++++++|+. ++++.+
T Consensus 15 ~~~~vvllHG~~~~~~~------~~~~-~~~L~~~g~~vi~~D~~GhG~s~~~----~~~~~~~~~~~d~~~~~~~l~~~ 83 (247)
T 1tqh_A 15 GERAVLLLHGFTGNSAD------VRML-GRFLESKGYTCHAPIYKGHGVPPEE----LVHTGPDDWWQDVMNGYEFLKNK 83 (247)
T ss_dssp SSCEEEEECCTTCCTHH------HHHH-HHHHHHTTCEEEECCCTTSSSCHHH----HTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCChHH------HHHH-HHHHHHCCCEEEecccCCCCCCHHH----hcCCCHHHHHHHHHHHHHHHHHc
Confidence 46789999999988754 6444 4555 46999999999999976421 12367787776654 466778
Q ss_pred CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhcccccc
Q 022316 117 GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRG 196 (299)
Q Consensus 117 ~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (299)
++++++|+||||||.+|+.+|.++| |+++|+++++.......... ..... .. .... ....
T Consensus 84 ~~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~--~~~~~---------~~-~~~~-~~~~----- 143 (247)
T 1tqh_A 84 GYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMY--EGVLE---------YA-REYK-KREG----- 143 (247)
T ss_dssp TCCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHH--HHHHH---------HH-HHHH-HHHT-----
T ss_pred CCCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhh--HHHHH---------HH-HHhh-cccc-----
Confidence 8899999999999999999999999 99999987655432211111 00000 00 0000 0000
Q ss_pred CCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEE
Q 022316 197 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALV 274 (299)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~ 274 (299)
. .++.................... ..+. .+..+.+++|++|+|+|+|++|.++ +.++.+.+.+++.+++++
T Consensus 144 ~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~ 216 (247)
T 1tqh_A 144 K----SEEQIEQEMEKFKQTPMKTLKAL-QELI--ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIK 216 (247)
T ss_dssp C----CHHHHHHHHHHHTTSCCTTHHHH-HHHH--HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEE
T ss_pred c----chHHHHhhhhcccCCCHHHHHHH-HHHH--HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEE
Confidence 0 11111111111111111111111 1111 2345668899999999999999997 667778888876557899
Q ss_pred EEcCchhhhHhH-----HHHHHHHhhhh
Q 022316 275 EVWTRVYISLLG-----FLVLLASFCES 297 (299)
Q Consensus 275 ~~~~~~H~~~~~-----f~~~~~~~~~~ 297 (299)
++|++||.+..| |.+.+..|+++
T Consensus 217 ~~~~~gH~~~~e~~~~~~~~~i~~Fl~~ 244 (247)
T 1tqh_A 217 WYEQSGHVITLDQEKDQLHEDIYAFLES 244 (247)
T ss_dssp EETTCCSSGGGSTTHHHHHHHHHHHHHH
T ss_pred EeCCCceeeccCccHHHHHHHHHHHHHh
Confidence 999999998754 45556677654
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.9e-31 Score=214.66 Aligned_cols=126 Identities=14% Similarity=0.193 Sum_probs=106.5
Q ss_pred CcceeecCCceEEEEeccCC--CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~--~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
+.+.+.+++.+++|...|++ ++|+|||+||++.+... |...+..+...||+|+++|+||||.|..+. ...
T Consensus 4 ~~~~~~~~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~------~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~--~~~ 75 (356)
T 2e3j_A 4 VHRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYS------WRHQIPALAGAGYRVVAIDQRGYGRSSKYR--VQK 75 (356)
T ss_dssp CEEEEEETTEEEEEEEECCTTCCSCEEEEECCTTCCGGG------GTTTHHHHHHTTCEEEEECCTTSTTSCCCC--SGG
T ss_pred eEEEEccCCeEEEEEEecCCCCCCCEEEEECCCCCcHHH------HHHHHHHHHHcCCEEEEEcCCCCCCCCCCC--ccc
Confidence 44567888899999999964 67899999999887644 655544444569999999999999986432 123
Q ss_pred cccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
.++++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|+++++.
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 76 AYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp GGSHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred ccCHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 57999999999999999999999999999999999999999999999999999865
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-30 Score=207.04 Aligned_cols=261 Identities=13% Similarity=0.095 Sum_probs=159.3
Q ss_pred CCCCcceeecCCc--eEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSHG--SLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 18 ~~~~~~~i~~~~~--~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
++.+...+..+++ +++|...++ +++|+|||+||++.+... |...+..+...||+|+++|+||||.|..+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 91 (315)
T 4f0j_A 18 YPVHYLDFTSQGQPLSMAYLDVAPKKANGRTILLMHGKNFCAGT------WERTIDVLADAGYRVIAVDQVGFCKSSKPA 91 (315)
T ss_dssp SCCEEEEEEETTEEEEEEEEEECCSSCCSCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCCS
T ss_pred ccceeEEEecCCCCeeEEEeecCCCCCCCCeEEEEcCCCCcchH------HHHHHHHHHHCCCeEEEeecCCCCCCCCCC
Confidence 3444455556665 456666654 467899999999887744 644444444558999999999999996532
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHH
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (299)
...++++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.....................
T Consensus 92 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 168 (315)
T 4f0j_A 92 ---HYQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYR 168 (315)
T ss_dssp ---SCCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHH
T ss_pred ---ccccCHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHh
Confidence 23589999999999999999999999999999999999999999999999999998654321111000000000000
Q ss_pred h--hcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHH----HHHhhcCCCChhhhhccccccEEE
Q 022316 174 Y--YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWH----FLEAINGRPDISEGLRKLQCRSLI 247 (299)
Q Consensus 174 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~P~li 247 (299)
. ..............++....... ...................... ....... .+....+.++++|+|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~P~li 243 (315)
T 4f0j_A 169 RDLQTSAEGIRQYQQATYYAGEWRPE----FDRWVQMQAGMYRGKGRESVAWNSALTYDMIFT-QPVVYELDRLQMPTLL 243 (315)
T ss_dssp HHTTCCHHHHHHHHHHHTSTTCCCGG----GHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHH-CCCGGGGGGCCSCEEE
T ss_pred hcccCChHHHHHHHHHHHhccccCCc----hHHHHHHHHHHhhccCcchhhHHHHHhcCcccc-chhhhhcccCCCCeEE
Confidence 0 01111111111111221111100 1222222222222111111100 1111111 3455678899999999
Q ss_pred EecCCCcchh------------------hhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHh
Q 022316 248 FVGESSPFHS------------------EAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASF 294 (299)
Q Consensus 248 i~G~~D~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~ 294 (299)
|+|++|.++. ..+.+.+.++ ++++++++++||..+.+..+.++..
T Consensus 244 i~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~ 306 (315)
T 4f0j_A 244 LIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIP--QATLVEFPDLGHTPQIQAPERFHQA 306 (315)
T ss_dssp EEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHST--TEEEEEETTCCSCHHHHSHHHHHHH
T ss_pred EEecCCCcCccccccccccccccccchhhhhHHHhhcC--CceEEEeCCCCcchhhhCHHHHHHH
Confidence 9999999862 2334444454 3899999999999998755554433
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-31 Score=212.34 Aligned_cols=253 Identities=14% Similarity=0.142 Sum_probs=155.4
Q ss_pred CCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
...+.+.+.++++.++|... +++|+|||+||+|..+.. ..| ..+...|.++|+|+++|+||||.|+... .
T Consensus 19 ~~~~~~~v~~~~~~~~~~~~--~~~p~vv~lHG~G~~~~~----~~~-~~~~~~L~~~~~vi~~D~~G~G~S~~~~---~ 88 (292)
T 3l80_A 19 AALNKEMVNTLLGPIYTCHR--EGNPCFVFLSGAGFFSTA----DNF-ANIIDKLPDSIGILTIDAPNSGYSPVSN---Q 88 (292)
T ss_dssp -CCEEEEECCTTSCEEEEEE--CCSSEEEEECCSSSCCHH----HHT-HHHHTTSCTTSEEEEECCTTSTTSCCCC---C
T ss_pred hccCcceEEecCceEEEecC--CCCCEEEEEcCCCCCcHH----HHH-HHHHHHHhhcCeEEEEcCCCCCCCCCCC---c
Confidence 34566788899999988743 366899999976544322 226 4446777789999999999999997321 2
Q ss_pred CcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcc-------hhHHHHhhhhhh
Q 022316 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-------WTEWLYNKVMSN 170 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~-------~~~~~~~~~~~~ 170 (299)
..++++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|+++|...... ..... .... .
T Consensus 89 ~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~-~ 166 (292)
T 3l80_A 89 ANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQL-ALRR-Q 166 (292)
T ss_dssp TTCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHH-HHHH-H
T ss_pred ccccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhH-HHHH-H
Confidence 3589999999999999999999999999999999999999999999999999996432110 00000 0000 0
Q ss_pred hHHhhcchh-HHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccc-cchHHHHHhhcCCCChhhhhccccccEEEE
Q 022316 171 LLYYYGMCG-VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (299)
Q Consensus 171 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 248 (299)
.+...+... .. ......++....... ...........+..... .. ......+ ...+..+.+++ ++|+|+|
T Consensus 167 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~-~~~~~~~-~~~~~~~~l~~-~~P~lii 238 (292)
T 3l80_A 167 KLKTAADRLNYL-KDLSRSHFSSQQFKQ----LWRGYDYCQRQLNDVQSLPD-FKIRLAL-GEEDFKTGISE-KIPSIVF 238 (292)
T ss_dssp TCCSHHHHHHHH-HHHHHHHSCHHHHHH----HHHHHHHHHHHHHTTTTSTT-CCSSCCC-CGGGGCCCCCT-TSCEEEE
T ss_pred HHhccCchhhhH-hhccccccCHHHHHH----hHHHHHHHHHHHHhhhhccc-cchhhhh-cchhhhhccCC-CCCEEEE
Confidence 000000001 11 112333333322110 01122222222222111 11 0000111 11122245666 9999999
Q ss_pred ecCCCcch-hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHh
Q 022316 249 VGESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASF 294 (299)
Q Consensus 249 ~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~ 294 (299)
+|++|..+ ..+ .+.+.+++ .+ ++++++||.++.+..+.++..
T Consensus 239 ~g~~D~~~~~~~-~~~~~~~~--~~-~~~~~~gH~~~~e~p~~~~~~ 281 (292)
T 3l80_A 239 SESFREKEYLES-EYLNKHTQ--TK-LILCGQHHYLHWSETNSILEK 281 (292)
T ss_dssp ECGGGHHHHHTS-TTCCCCTT--CE-EEECCSSSCHHHHCHHHHHHH
T ss_pred EccCccccchHH-HHhccCCC--ce-eeeCCCCCcchhhCHHHHHHH
Confidence 99999998 334 66666655 66 999999999997755554433
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-31 Score=206.04 Aligned_cols=230 Identities=10% Similarity=0.033 Sum_probs=145.2
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC-C
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-G 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~ 119 (299)
.+|+|||+||++.+... |.+.+..+..+||+|+++|+||||.|..+. ...++++++++++.+++++++. +
T Consensus 3 ~g~~vv~lHG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~l~~~l~~l~~~~ 73 (258)
T 3dqz_A 3 RKHHFVLVHNAYHGAWI------WYKLKPLLESAGHRVTAVELAASGIDPRPI---QAVETVDEYSKPLIETLKSLPENE 73 (258)
T ss_dssp CCCEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEEECCTTSTTCSSCG---GGCCSHHHHHHHHHHHHHTSCTTC
T ss_pred CCCcEEEECCCCCcccc------HHHHHHHHHhCCCEEEEecCCCCcCCCCCC---CccccHHHhHHHHHHHHHHhcccC
Confidence 35899999999988754 655544444568999999999999996532 2348999999999999999998 9
Q ss_pred cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhh----hHHh-hc----------chhHHHHH
Q 022316 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN----LLYY-YG----------MCGVVKEL 184 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~----~~~~-~~----------~~~~~~~~ 184 (299)
+++|+||||||.+++.+|.++|++|+++|++++.................. .+.. .. .......
T Consensus 74 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 152 (258)
T 3dqz_A 74 EVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPK- 152 (258)
T ss_dssp CEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHH-
T ss_pred ceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHH-
Confidence 999999999999999999999999999999998665432211000000000 0000 00 0000001
Q ss_pred HHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHH
Q 022316 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 262 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~ 262 (299)
.....+.... .++.............. +...... ..........++|+++|+|++|.++ +..+.+
T Consensus 153 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 219 (258)
T 3dqz_A 153 FMKARLYQNC-------PIEDYELAKMLHRQGSF--FTEDLSK----KEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWM 219 (258)
T ss_dssp HHHHHTSTTS-------CHHHHHHHHHHCCCEEC--CHHHHHT----SCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHH
T ss_pred HHHHHhhccC-------CHHHHHHHHHhccCCch--hhhhhhc----cccccccccccCCEEEEECCCCeeeCHHHHHHH
Confidence 1111111110 12222222222222111 1111111 1111122334899999999999998 667777
Q ss_pred hhhccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 263 TSKIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
.+.+++ ++++++|++||.++.+..+.++..+
T Consensus 220 ~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i 250 (258)
T 3dqz_A 220 IDNFNV--SKVYEIDGGDHMVMLSKPQKLFDSL 250 (258)
T ss_dssp HHHSCC--SCEEEETTCCSCHHHHSHHHHHHHH
T ss_pred HHhCCc--ccEEEcCCCCCchhhcChHHHHHHH
Confidence 777765 7899999999999987655554333
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=214.17 Aligned_cols=269 Identities=11% Similarity=0.102 Sum_probs=160.0
Q ss_pred CceEEEEeccCC---CCCeEEEecccccchhhhc-------cccccCchh---hhcccCceEEEEECCCCCCCCC-----
Q 022316 29 HGSLSVTIYGDQ---DKPALVTYPDLALNYMSCF-------QGLFFCPEA---CSLLLHNFCIYHINPPGHEFGA----- 90 (299)
Q Consensus 29 ~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~-------~~~~w~~~~---~~~l~~~~~vi~~D~~G~G~S~----- 90 (299)
+.+|+|..+|+. ++|+|||+||++.++.... ...||...+ ..++.++|+|+++|+||||.|.
T Consensus 26 ~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g 105 (377)
T 3i1i_A 26 PVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVI 105 (377)
T ss_dssp EEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCC
T ss_pred eeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcc
Confidence 457899999863 3589999999998864311 112364444 3556789999999999998743
Q ss_pred --CC---CCCC-------CCcccHHHHHHHHHHHHHhcCCCcEE-EEeeCccHHHHHHHHHHccCcccEEEE-ecCCCCC
Q 022316 91 --AA---ISDD-------EPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLIL-VSPLCKA 156 (299)
Q Consensus 91 --~~---~~~~-------~~~~~~~~~~~~l~~~l~~l~~~~~~-lvG~S~Gg~va~~~a~~~p~~v~~lvl-~~~~~~~ 156 (299)
.+ .+.. ...++++++++++.++++.+++++++ |+||||||.+|+.+|.++|++|+++|+ +++....
T Consensus 106 ~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 185 (377)
T 3i1i_A 106 TTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNP 185 (377)
T ss_dssp CCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBCC
T ss_pred cCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCcC
Confidence 11 1100 12579999999999999999999996 999999999999999999999999999 7766553
Q ss_pred cchhHHHHhhhhhhhHHh-h-----c----ch-hHHH------------HHHHHhhhccccccCC---CCCchHHHHHHH
Q 022316 157 PSWTEWLYNKVMSNLLYY-Y-----G----MC-GVVK------------ELLLKRYFSKEVRGNA---QVPESDIVQACR 210 (299)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~-----~----~~-~~~~------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 210 (299)
........ ......+.. . . .. .... ...+...+........ ....++..+.+.
T Consensus 186 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (377)
T 3i1i_A 186 IITSVNVA-QNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKEI 264 (377)
T ss_dssp HHHHHHTT-HHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHHHHH
T ss_pred CchhhHHH-HHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHHHHH
Confidence 32111100 000000000 0 0 00 0000 0011111111100000 000001112211
Q ss_pred Hhh-----hcccccchHHHHHhhcC------CCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccc--cCceEEE
Q 022316 211 RLL-----DERQSSNVWHFLEAING------RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR--RYSALVE 275 (299)
Q Consensus 211 ~~~-----~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~--~~~~~~~ 275 (299)
... .......+......+.. ..+..+.+.+|++|+|+|+|++|.++ +.++.+.+.+.. .++++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~~~~~~ 344 (377)
T 3i1i_A 265 NKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAEVYE 344 (377)
T ss_dssp HHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCCceEEE
Confidence 111 11122222222222211 23446778999999999999999987 667777777721 3488999
Q ss_pred EcC-chhhhHhH----HHHHHHHhhhhc
Q 022316 276 VWT-RVYISLLG----FLVLLASFCESE 298 (299)
Q Consensus 276 ~~~-~~H~~~~~----f~~~~~~~~~~~ 298 (299)
+++ +||.++.| +.+.+..|+++.
T Consensus 345 i~~~~gH~~~~e~p~~~~~~i~~fl~~~ 372 (377)
T 3i1i_A 345 IESINGHMAGVFDIHLFEKKVYEFLNRK 372 (377)
T ss_dssp BCCTTGGGHHHHCGGGTHHHHHHHHHSC
T ss_pred cCCCCCCcchhcCHHHHHHHHHHHHHhh
Confidence 998 99988875 556666777653
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=211.50 Aligned_cols=242 Identities=13% Similarity=0.100 Sum_probs=155.3
Q ss_pred ceeecCCceEEEEeccCC--CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 23 NLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~--~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
.....++.+|+|..+++. +.|+|||+||++.+... |...+..+...||+|+++|+||||.|..+. ....
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~---~~~~ 91 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGR------YEELARMLMGLDLLVFAHDHVGHGQSEGER---MVVS 91 (303)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGG------GHHHHHHHHHTTEEEEEECCTTSTTSCSST---TCCS
T ss_pred eEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhhH------HHHHHHHHHhCCCcEEEeCCCCCCCCCCCC---CCCC
Confidence 445556679999988764 35789999999887743 644444444559999999999999997532 2346
Q ss_pred cHHHHHHHHHHHHHhcCC----CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhc
Q 022316 101 SVDDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~----~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (299)
+++++++|+.++++.+.. ++++++||||||.+++.+|.++|++|+++|++++..................
T Consensus 92 ~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~------ 165 (303)
T 3pe6_A 92 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAK------ 165 (303)
T ss_dssp STHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHH------
T ss_pred CHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHH------
Confidence 888888999888877644 4999999999999999999999999999999998776543222111111111
Q ss_pred chhHHHHHHHHhhhccccc----cCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhcCCCChhhhhccccccEEEEecC
Q 022316 177 MCGVVKELLLKRYFSKEVR----GNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 251 (299)
....+...... .............+....... ................+....+.++++|+++|+|+
T Consensus 166 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~ 237 (303)
T 3pe6_A 166 --------VLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGS 237 (303)
T ss_dssp --------HHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEET
T ss_pred --------HHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeC
Confidence 11111110000 000000122222222211111 11111111111111123446678899999999999
Q ss_pred CCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHH
Q 022316 252 SSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGF 287 (299)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f 287 (299)
+|.++ +..+.+.+.++..++++++++++||..+.+.
T Consensus 238 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 275 (303)
T 3pe6_A 238 ADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKEL 275 (303)
T ss_dssp TCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSC
T ss_pred CCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccc
Confidence 99998 6677788888755689999999999988753
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-31 Score=215.83 Aligned_cols=271 Identities=13% Similarity=0.129 Sum_probs=161.6
Q ss_pred ecCCceEEEEeccCC---CCCeEEEecccccchhhhc-------cccccCchhh---hcccCceEEEEECCCC--CCCCC
Q 022316 26 KTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCF-------QGLFFCPEAC---SLLLHNFCIYHINPPG--HEFGA 90 (299)
Q Consensus 26 ~~~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~-------~~~~w~~~~~---~~l~~~~~vi~~D~~G--~G~S~ 90 (299)
+.++.+++|...|++ ++|+|||+||++.+..... ...+|.+.+. .++.+||+|+++|+|| +|.|.
T Consensus 27 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~ 106 (366)
T 2pl5_A 27 VLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSG 106 (366)
T ss_dssp EESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSS
T ss_pred cccCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCC
Confidence 344558999999964 3689999999998875210 0003644432 3457899999999999 88886
Q ss_pred CCCCCCC---------CcccHHHHHHHHHHHHHhcCCCcE-EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh
Q 022316 91 AAISDDE---------PVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (299)
Q Consensus 91 ~~~~~~~---------~~~~~~~~~~~l~~~l~~l~~~~~-~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (299)
....... ..++++++++|+.++++.++.+++ +|+||||||.+|+.+|.++|++|+++|++++........
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 186 (366)
T 2pl5_A 107 PLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQ 186 (366)
T ss_dssp TTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHH
T ss_pred CCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCcc
Confidence 4221001 137999999999999999999999 899999999999999999999999999999987654322
Q ss_pred HHHHhhhhhhhHHhh-c---------ch-hHH------------HHHHHHhhhccccccCCCCCchHHHHHHHHhh----
Q 022316 161 EWLYNKVMSNLLYYY-G---------MC-GVV------------KELLLKRYFSKEVRGNAQVPESDIVQACRRLL---- 213 (299)
Q Consensus 161 ~~~~~~~~~~~~~~~-~---------~~-~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 213 (299)
.... ......+... . .. ... ....+..++................+.+....
T Consensus 187 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (366)
T 2pl5_A 187 IAFN-EVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESF 265 (366)
T ss_dssp HHHH-HHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCS
T ss_pred chhh-HHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhh
Confidence 1111 0000000000 0 00 000 00011111111110000000000000000000
Q ss_pred -hcccccchHHHHHhhcCC-----CChhhhhccccccEEEEecCCCcch--hhhHHHhhhcccc--CceEEEE-cCchhh
Q 022316 214 -DERQSSNVWHFLEAINGR-----PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEV-WTRVYI 282 (299)
Q Consensus 214 -~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~--~~~~~~~-~~~~H~ 282 (299)
.......+......+... .+....+.++++|+|+|+|++|.++ +.++.+.+.++.. +++++++ +++||.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 345 (366)
T 2pl5_A 266 VDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHD 345 (366)
T ss_dssp SSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSG
T ss_pred hcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCCcc
Confidence 000111111112221110 0234568899999999999999997 6677788877632 4889999 899999
Q ss_pred hHhH----HHHHHHHhhhh
Q 022316 283 SLLG----FLVLLASFCES 297 (299)
Q Consensus 283 ~~~~----f~~~~~~~~~~ 297 (299)
.+.+ +.+.+..|+++
T Consensus 346 ~~~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 346 SFLLKNPKQIEILKGFLEN 364 (366)
T ss_dssp GGGSCCHHHHHHHHHHHHC
T ss_pred hhhcChhHHHHHHHHHHcc
Confidence 8875 55666677664
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=202.86 Aligned_cols=234 Identities=8% Similarity=-0.009 Sum_probs=144.9
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC-C
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~ 118 (299)
+++|+|||+||++.+... |.+.+..+...||+|+++|+||||.|..+. ...++++++++++.++++.++ .
T Consensus 10 ~~~~~vvllHG~~~~~~~------~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~---~~~~~~~~~~~~~~~~l~~l~~~ 80 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWC------WYKIVALMRSSGHNVTALDLGASGINPKQA---LQIPNFSDYLSPLMEFMASLPAN 80 (267)
T ss_dssp CCCCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTCSCCG---GGCCSHHHHHHHHHHHHHTSCTT
T ss_pred CCCCeEEEECCCCCCcch------HHHHHHHHHhcCCeEEEeccccCCCCCCcC---CccCCHHHHHHHHHHHHHhcCCC
Confidence 467899999999987744 644444444458999999999999996532 224899999999999999994 8
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhh----hhhH-Hhh----cc-----hhHHHHH
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM----SNLL-YYY----GM-----CGVVKEL 184 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~----~~~~-~~~----~~-----~~~~~~~ 184 (299)
++++|+||||||.+++.+|.++|++|+++|++++................ .... ... +. .......
T Consensus 81 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
T 3sty_A 81 EKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPK 160 (267)
T ss_dssp SCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHH
T ss_pred CCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHH
Confidence 99999999999999999999999999999999987654322111100000 0000 000 00 0000000
Q ss_pred HHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHH
Q 022316 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 262 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~ 262 (299)
.....+.... .++...................+..... .......++|+++|+|++|.++ +..+.+
T Consensus 161 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 228 (267)
T 3sty_A 161 FLATNVYHLS-------PIEDLALATALVRPLYLYLAEDISKEVV-----LSSKRYGSVKRVFIVATENDALKKEFLKLM 228 (267)
T ss_dssp HHHHHTSTTS-------CHHHHHHHHHHCCCEECCCHHHHHHHCC-----CCTTTGGGSCEEEEECCCSCHHHHHHHHHH
T ss_pred HHHHhhcccC-------CHHHHHHHHHhhccchhHHHHHhhcchh-----cccccccCCCEEEEEeCCCCccCHHHHHHH
Confidence 1111111110 1222222222222211111111111110 0111223799999999999997 667777
Q ss_pred hhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 263 TSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.+.+++ ++++++|++||.++.+..+.++..+.
T Consensus 229 ~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~ 260 (267)
T 3sty_A 229 IEKNPP--DEVKEIEGSDHVTMMSKPQQLFTTLL 260 (267)
T ss_dssp HHHSCC--SEEEECTTCCSCHHHHSHHHHHHHHH
T ss_pred HHhCCC--ceEEEeCCCCccccccChHHHHHHHH
Confidence 777755 89999999999999876655554433
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=217.51 Aligned_cols=253 Identities=12% Similarity=0.100 Sum_probs=164.1
Q ss_pred eecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHH
Q 022316 25 IKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD 104 (299)
Q Consensus 25 i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 104 (299)
+..++.+++|...| ++|+|||+||++.+... |.+.+..+...||+|+++|+||||.|..+. ..+++++
T Consensus 9 ~~~dG~~l~y~~~G--~gp~VV~lHG~~~~~~~------~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~----~~~s~~~ 76 (456)
T 3vdx_A 9 ENSTSIDLYYEDHG--TGVPVVLIHGFPLSGHS------WERQSAALLDAGYRVITYDRRGFGQSSQPT----TGYDYDT 76 (456)
T ss_dssp ETTEEEEEEEEEES--SSEEEEEECCTTCCGGG------GTTHHHHHHHHTEEEEEECCTTSTTSCCCS----SCCSHHH
T ss_pred cccCCeEEEEEEeC--CCCEEEEECCCCCcHHH------HHHHHHHHHHCCcEEEEECCCCCCCCCCCC----CCCCHHH
Confidence 34466799999998 67999999999987744 655544444779999999999999996432 3589999
Q ss_pred HHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCCCcch---------hHHHHhhhhhhhHHh
Q 022316 105 LADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSW---------TEWLYNKVMSNLLYY 174 (299)
Q Consensus 105 ~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~~~~~---------~~~~~~~~~~~~~~~ 174 (299)
+++|+.++++.++.++++|+||||||.+++.+|+++ |++|+++|++++....... ..... ..+.....
T Consensus 77 ~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 154 (456)
T 3vdx_A 77 FAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFF-DGIVAAVK- 154 (456)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHH-HHHHHHHH-
T ss_pred HHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHH-HHHHHhhh-
Confidence 999999999999999999999999999999999988 8999999999987643110 00000 01101000
Q ss_pred hcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCc
Q 022316 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 254 (299)
....... ......++........ ...++....+..................+ ..+....+.++++|+|+|+|++|.
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~PvLiI~G~~D~ 230 (456)
T 3vdx_A 155 ADRYAFY-TGFFNDFYNLDENLGT-RISEEAVRNSWNTAASGGFFAAAAAPTTW--YTDFRADIPRIDVPALILHGTGDR 230 (456)
T ss_dssp HCHHHHH-HHHHHHHTTTTTSBTT-TBCHHHHHHHHHHHHTSCTTHHHHGGGGT--TCCCTTTSTTCCSCCEEEEETTCS
T ss_pred ccchHHH-HHHHHHHhcccccccc-cccHHHHHHHhhhccccchhhhhhhhhhh--hhhHHHHhhhCCCCEEEEEeCCCC
Confidence 0111111 1122233322211110 11233333333323222222222222222 245667788999999999999999
Q ss_pred ch--h-hhHHHhhhccccCceEEEEcCchhhhHhHH----HHHHHHhhhh
Q 022316 255 FH--S-EAVHMTSKIDRRYSALVEVWTRVYISLLGF----LVLLASFCES 297 (299)
Q Consensus 255 ~~--~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f----~~~~~~~~~~ 297 (299)
++ + ....+.+.++. +++++++++||.+..+. .+.+..|+++
T Consensus 231 ~vp~~~~~~~l~~~~~~--~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~ 278 (456)
T 3vdx_A 231 TLPIENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 278 (456)
T ss_dssp SSCGGGTHHHHHHHCTT--SEEEEETTCCSCTTTTTHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHCCC--ceEEEeCCCCCcchhhCHHHHHHHHHHHHHH
Confidence 98 3 34555555544 89999999999887654 4444555543
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=209.77 Aligned_cols=270 Identities=12% Similarity=0.095 Sum_probs=161.4
Q ss_pred eecCCceEEEEeccCCC---CCeEEEecccccchhhh---ccccccCchhh--hcc-cCceEEEEECCCC-CCCCCCCCC
Q 022316 25 IKTSHGSLSVTIYGDQD---KPALVTYPDLALNYMSC---FQGLFFCPEAC--SLL-LHNFCIYHINPPG-HEFGAAAIS 94 (299)
Q Consensus 25 i~~~~~~l~~~~~g~~~---~p~lvl~HG~~~~~~~~---~~~~~w~~~~~--~~l-~~~~~vi~~D~~G-~G~S~~~~~ 94 (299)
..+++.+++|...|+++ +|+|||+||++.+.... ....+|...+. +.| .+||+|+++|+|| +|.|..+..
T Consensus 39 ~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~ 118 (377)
T 2b61_A 39 GKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSS 118 (377)
T ss_dssp CEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTS
T ss_pred ceecceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcc
Confidence 34566789999999654 78999999999887431 00112533332 235 7899999999999 687754321
Q ss_pred C----------CCCcccHHHHHHHHHHHHHhcCCCcEE-EEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHH
Q 022316 95 D----------DEPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163 (299)
Q Consensus 95 ~----------~~~~~~~~~~~~~l~~~l~~l~~~~~~-lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 163 (299)
. ....++++++++++.++++.+++++++ |+||||||.+|+.+|.++|++|+++|++++...........
T Consensus 119 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 198 (377)
T 2b61_A 119 INPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGF 198 (377)
T ss_dssp BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHH
T ss_pred cCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhH
Confidence 0 001479999999999999999999998 99999999999999999999999999999987654222111
Q ss_pred HhhhhhhhHHhhc-----------ch------hHHH------HHHHHhhhccccccCCCC-CchHHHHHHHH-----hhh
Q 022316 164 YNKVMSNLLYYYG-----------MC------GVVK------ELLLKRYFSKEVRGNAQV-PESDIVQACRR-----LLD 214 (299)
Q Consensus 164 ~~~~~~~~~~~~~-----------~~------~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~ 214 (299)
.......+..... .. .... ...+...+.......... ......+.+.. ...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (377)
T 2b61_A 199 NHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLE 278 (377)
T ss_dssp HHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhhcc
Confidence 0000000000000 00 0000 001111221111100000 00112222221 111
Q ss_pred cccccchHHHHHhhcC------CCChhhhhccccccEEEEecCCCcch-h-----hhHHHhhhccccCceEEEEc-Cchh
Q 022316 215 ERQSSNVWHFLEAING------RPDISEGLRKLQCRSLIFVGESSPFH-S-----EAVHMTSKIDRRYSALVEVW-TRVY 281 (299)
Q Consensus 215 ~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~P~lii~G~~D~~~-~-----~~~~~~~~~~~~~~~~~~~~-~~~H 281 (299)
......+......+.. ..+....+.+|++|+|+|+|++|.++ . ..+.+.+.+++ +++++++ ++||
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~i~~~~gH 356 (377)
T 2b61_A 279 RFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVD--LHFYEFPSDYGH 356 (377)
T ss_dssp TCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCE--EEEEEECCTTGG
T ss_pred ccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCC--ceEEEeCCCCCc
Confidence 1222233333332211 12346778999999999999999997 2 34455555544 8899999 9999
Q ss_pred hhHhHHH----HHHHHhhh
Q 022316 282 ISLLGFL----VLLASFCE 296 (299)
Q Consensus 282 ~~~~~f~----~~~~~~~~ 296 (299)
..+.+-. +.+..|++
T Consensus 357 ~~~~e~p~~~~~~i~~fl~ 375 (377)
T 2b61_A 357 DAFLVDYDQFEKRIRDGLA 375 (377)
T ss_dssp GHHHHCHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHh
Confidence 9987644 44455554
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=208.97 Aligned_cols=234 Identities=11% Similarity=0.108 Sum_probs=142.3
Q ss_pred cceeecCC-ceEEEEeccCC-----CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCC-CCCCCCC
Q 022316 22 DNLIKTSH-GSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGH-EFGAAAI 93 (299)
Q Consensus 22 ~~~i~~~~-~~l~~~~~g~~-----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~-G~S~~~~ 93 (299)
.+.+.+.+ .+++|...++. .+|+|||+||++.+... |.+. .+.| ..||+|+++|+||| |.|+.+.
T Consensus 9 ~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~------~~~~-~~~L~~~G~~Vi~~D~rGh~G~S~~~~ 81 (305)
T 1tht_A 9 AHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDH------FAGL-AEYLSTNGFHVFRYDSLHHVGLSSGSI 81 (305)
T ss_dssp EEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGG------GHHH-HHHHHTTTCCEEEECCCBCC-------
T ss_pred EEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCchH------HHHH-HHHHHHCCCEEEEeeCCCCCCCCCCcc
Confidence 34566654 48998887753 46899999999988744 7444 4555 56999999999999 9986432
Q ss_pred CCCCCcccHHHHHHHHHHHHHhc---CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhh
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (299)
..++++++++|+.++++.+ +.++++|+||||||.+|+.+|.+ | +|+++|++++......... .
T Consensus 82 ----~~~~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~--------~ 147 (305)
T 1tht_A 82 ----DEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLE--------K 147 (305)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHH--------H
T ss_pred ----cceehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHH--------H
Confidence 2478999999988888754 78899999999999999999988 7 8999999887542111000 0
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEec
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 250 (299)
.... ...... ...+........ ............... .+....+....+++|++|+|+|+|
T Consensus 148 ~~~~-~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~i~~PvLii~G 208 (305)
T 1tht_A 148 ALGF-DYLSLP-----IDELPNDLDFEG--HKLGSEVFVRDCFEH-----------HWDTLDSTLDKVANTSVPLIAFTA 208 (305)
T ss_dssp HHSS-CGGGSC-----GGGCCSEEEETT--EEEEHHHHHHHHHHT-----------TCSSHHHHHHHHTTCCSCEEEEEE
T ss_pred Hhhh-hhhhcc-----hhhCcccccccc--cccCHHHHHHHHHhc-----------cccchhhHHHHHhhcCCCEEEEEe
Confidence 0000 000000 000000000000 000000000000000 000001233557889999999999
Q ss_pred CCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 251 ESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 251 ~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
++|.++ +.++.+.+.++..+++++++|++||.+. +-++.+..|++
T Consensus 209 ~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~~~fl~ 255 (305)
T 1tht_A 209 NNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRNFYQ 255 (305)
T ss_dssp TTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHHHHHHH
Confidence 999998 5677787877655689999999999875 55555545543
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=224.04 Aligned_cols=266 Identities=12% Similarity=0.106 Sum_probs=167.0
Q ss_pred CCcceeec-CCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 20 GKDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 20 ~~~~~i~~-~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
.+.+++++ ++.+++|...| ++|+|||+||++.+... |...+..+...||+|+++|+||||.|..+. ...
T Consensus 237 ~~~~~~~~~dg~~l~~~~~g--~~p~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~--~~~ 306 (555)
T 3i28_A 237 MSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYS------WRYQIPALAQAGYRVLAMDMKGYGESSAPP--EIE 306 (555)
T ss_dssp SEEEEEEEETTEEEEEEEEC--SSSEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEEECCTTSTTSCCCS--CGG
T ss_pred cceeEEEeCCCcEEEEEEcC--CCCEEEEEeCCCCchhH------HHHHHHHHHhCCCEEEEecCCCCCCCCCCC--Ccc
Confidence 35567788 46699999999 67999999999988744 655555555569999999999999996532 234
Q ss_pred cccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH--HHH--h-hhhh--hh
Q 022316 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE--WLY--N-KVMS--NL 171 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~--~-~~~~--~~ 171 (299)
.++++++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|+++++........ ... . .... ..
T Consensus 307 ~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (555)
T 3i28_A 307 EYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLY 386 (555)
T ss_dssp GGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHH
T ss_pred cccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHH
Confidence 688999999999999999999999999999999999999999999999999998765432111 000 0 0000 00
Q ss_pred HHhhcchhHHH----HHHHHhhhcccccc----------------------CCCCCchHHHHHHHHhhhcccccchHHHH
Q 022316 172 LYYYGMCGVVK----ELLLKRYFSKEVRG----------------------NAQVPESDIVQACRRLLDERQSSNVWHFL 225 (299)
Q Consensus 172 ~~~~~~~~~~~----~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (299)
........... ...+..++...... .......+....+...+..........+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (555)
T 3i28_A 387 FQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWY 466 (555)
T ss_dssp HHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTT
T ss_pred hhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHH
Confidence 00000000000 11111121111100 00001223333333333322111111111
Q ss_pred HhhcC--CCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHH----HHHHHhhhh
Q 022316 226 EAING--RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFL----VLLASFCES 297 (299)
Q Consensus 226 ~~~~~--~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~----~~~~~~~~~ 297 (299)
..+.. ..+....+.++++|+|+|+|++|.++ +..+.+.+.+++ +++++++++||..+.+-. +.+..|+++
T Consensus 467 ~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 544 (555)
T 3i28_A 467 RNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH--LKRGHIEDCGHWTQMDKPTEVNQILIKWLDS 544 (555)
T ss_dssp SCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred HhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCCC--ceEEEeCCCCCCcchhCHHHHHHHHHHHHHh
Confidence 00000 01233446789999999999999997 566677777754 889999999999887644 445566554
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-30 Score=216.18 Aligned_cols=265 Identities=14% Similarity=0.157 Sum_probs=161.2
Q ss_pred CCceEEEEeccCC---CCCeEEEecccccchhhhccccccCchhh--hcc-cCceEEEEECCCC--CCCCCCCC--CCCC
Q 022316 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEAC--SLL-LHNFCIYHINPPG--HEFGAAAI--SDDE 97 (299)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~~~~w~~~~~--~~l-~~~~~vi~~D~~G--~G~S~~~~--~~~~ 97 (299)
++.+++|...|+. ++|+|||+||++.+.... .+|.+.+. +.+ .++|+|+++|+|| +|.|.... +...
T Consensus 92 ~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~---~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~ 168 (444)
T 2vat_A 92 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVT---SWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAE 168 (444)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGG---GTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC
T ss_pred cceeEEEEEecCCCCCCCCeEEEECCCCcccchh---hHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccc
Confidence 4447899999963 368999999999887432 12544433 134 6899999999999 68875311 1101
Q ss_pred ---------CcccHHHHHHHHHHHHHhcCCCc-EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH-HHH--
Q 022316 98 ---------PVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-WLY-- 164 (299)
Q Consensus 98 ---------~~~~~~~~~~~l~~~l~~l~~~~-~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~-- 164 (299)
..++++++++|+.++++++++++ ++|+||||||++|+.+|.++|++|+++|++++......... +..
T Consensus 169 ~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~ 248 (444)
T 2vat_A 169 GQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQ 248 (444)
T ss_dssp --CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHH
Confidence 13799999999999999999999 99999999999999999999999999999999876543221 110
Q ss_pred hhhhhhh--HHh----------hcc--hhHHH------HHHHHhhhcccccc-C-------------------------C
Q 022316 165 NKVMSNL--LYY----------YGM--CGVVK------ELLLKRYFSKEVRG-N-------------------------A 198 (299)
Q Consensus 165 ~~~~~~~--~~~----------~~~--~~~~~------~~~~~~~~~~~~~~-~-------------------------~ 198 (299)
+..+... +.. .+. ..... ...+...+...... . .
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (444)
T 2vat_A 249 RQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQ 328 (444)
T ss_dssp HHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------
T ss_pred HHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccC
Confidence 0000000 000 000 00000 00111112111100 0 0
Q ss_pred C-CCchHHHHHHHH-hhhcccccchHHHHHhhcCC-------CChhhhhccccccEEEEecCCCcch--hhhHHHhhhcc
Q 022316 199 Q-VPESDIVQACRR-LLDERQSSNVWHFLEAINGR-------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKID 267 (299)
Q Consensus 199 ~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~ 267 (299)
. .......+.... .........+......+... .+....+.++++|+|+|+|++|.++ +..+++.+.++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p 408 (444)
T 2vat_A 329 PIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIP 408 (444)
T ss_dssp CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHST
T ss_pred chhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCC
Confidence 0 000111111111 11112222333333333220 1266778999999999999999997 66777778776
Q ss_pred ccCceEEEEc-CchhhhHhHHHHHH----HHhhhh
Q 022316 268 RRYSALVEVW-TRVYISLLGFLVLL----ASFCES 297 (299)
Q Consensus 268 ~~~~~~~~~~-~~~H~~~~~f~~~~----~~~~~~ 297 (299)
+ +++++++ ++||..+.|-.+.+ ..|+++
T Consensus 409 ~--~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~ 441 (444)
T 2vat_A 409 N--SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 441 (444)
T ss_dssp T--EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred C--cEEEEeCCCCCcchHHhCHHHHHHHHHHHHHH
Confidence 4 8999999 99999988755554 455543
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-30 Score=208.10 Aligned_cols=245 Identities=13% Similarity=0.106 Sum_probs=153.9
Q ss_pred eeecCCceEEEEeccCC--CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 24 LIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g~~--~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
+...++.+|+|..+++. ..|+|||+||++.+... |...+..+...||+|+++|+||+|.|..+. ...++
T Consensus 40 ~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~---~~~~~ 110 (342)
T 3hju_A 40 LVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGR------YEELARMLMGLDLLVFAHDHVGHGQSEGER---MVVSD 110 (342)
T ss_dssp EECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGG------GHHHHHHHHTTTEEEEEECCTTSTTSCSST---TCCSC
T ss_pred EEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccch------HHHHHHHHHhCCCeEEEEcCCCCcCCCCcC---CCcCc
Confidence 44446669999998754 35689999999887743 644444444459999999999999997532 23468
Q ss_pred HHHHHHHHHHHHHhcCC----CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcc
Q 022316 102 VDDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~----~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
++++++|+.++++.+.. ++++|+||||||.+++.+|.++|++|+++|++++...................+
T Consensus 111 ~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~----- 185 (342)
T 3hju_A 111 FHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVL----- 185 (342)
T ss_dssp THHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHHHH-----
Confidence 88888999888887654 499999999999999999999999999999999877654321111000000000
Q ss_pred hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch
Q 022316 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~ 256 (299)
..........................+....... ...........+....+....+.++++|+|+|+|++|.++
T Consensus 186 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~ 260 (342)
T 3hju_A 186 -----NLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLC 260 (342)
T ss_dssp -----HHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSS
T ss_pred -----HHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCccc
Confidence 0000000000000000000122222222211111 1111111111111112444668889999999999999997
Q ss_pred --hhhHHHhhhccccCceEEEEcCchhhhHhHH
Q 022316 257 --SEAVHMTSKIDRRYSALVEVWTRVYISLLGF 287 (299)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f 287 (299)
+.+..+.+.++..++++++++++||..+.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 293 (342)
T 3hju_A 261 DSKGAYLLMELAKSQDKTLKIYEGAYHVLHKEL 293 (342)
T ss_dssp CHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSC
T ss_pred ChHHHHHHHHHcCCCCceEEEECCCCchhhcCC
Confidence 6677888888755689999999999987753
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=204.92 Aligned_cols=119 Identities=17% Similarity=0.249 Sum_probs=97.2
Q ss_pred ceeecCC----ceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccC--ceEEEEECCCCCCCCCCCCCCC
Q 022316 23 NLIKTSH----GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 23 ~~i~~~~----~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
+.+.+++ ++++|...| +++|+|||+||++.++.. |. .+...|.+ +|+|+++|+||||.|..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~g-~~~p~lvllHG~~~~~~~------w~-~~~~~L~~~~~~~via~Dl~GhG~S~~~~--- 84 (316)
T 3c5v_A 16 EDVEVENETGKDTFRVYKSG-SEGPVLLLLHGGGHSALS------WA-VFTAAIISRVQCRIVALDLRSHGETKVKN--- 84 (316)
T ss_dssp EEEEEEETTEEEEEEEEEEC-SSSCEEEEECCTTCCGGG------GH-HHHHHHHTTBCCEEEEECCTTSTTCBCSC---
T ss_pred ceEEecCCcceEEEEEEecC-CCCcEEEEECCCCccccc------HH-HHHHHHhhcCCeEEEEecCCCCCCCCCCC---
Confidence 4555655 478888887 457899999999877744 74 44566777 9999999999999996432
Q ss_pred CCcccHHHHHHHHHHHHHhc--CC-CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCC
Q 022316 97 EPVLSVDDLADQIAEVLNHF--GL-GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPL 153 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l--~~-~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~ 153 (299)
...++++++++|+.++++++ +. ++++|+||||||.||+.+|.+ +|+ |+++|++++.
T Consensus 85 ~~~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 85 PEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred ccccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 13489999999999999999 66 789999999999999999996 576 9999999874
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=201.97 Aligned_cols=228 Identities=13% Similarity=0.063 Sum_probs=150.0
Q ss_pred ceeecCCceEEEEeccCC----CCCeEEEecccccc--hhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 23 NLIKTSHGSLSVTIYGDQ----DKPALVTYPDLALN--YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~----~~p~lvl~HG~~~~--~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
..+..++.+|++..+++. ++|+|||+||++.+ ... |...+..+...||+|+++|+||||.|..+
T Consensus 4 ~~~~~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~---- 73 (251)
T 2wtm_A 4 MYIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERH------IVAVQETLNEIGVATLRADMYGHGKSDGK---- 73 (251)
T ss_dssp EEEEETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHH------HHHHHHHHHHTTCEEEEECCTTSTTSSSC----
T ss_pred eEEecCCcEEEEEEEccCCCCCCCCEEEEEcCCCccccccc------HHHHHHHHHHCCCEEEEecCCCCCCCCCc----
Confidence 345667888988877653 35789999999888 422 53443344456999999999999999642
Q ss_pred CCcccHHHHHHHHHHHHHhcC----CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 97 EPVLSVDDLADQIAEVLNHFG----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~----~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
...++++++++|+.++++.+. +++++|+||||||.+++.+|.++|++|+++|+++|...... ... . ..
T Consensus 74 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~--~---~~- 145 (251)
T 2wtm_A 74 FEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPE--IAR--T---GE- 145 (251)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHH--HHH--H---TE-
T ss_pred cccCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHH--HHh--h---hh-
Confidence 124788999999999988874 46899999999999999999999999999999988643211 000 0 00
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 252 (299)
..+ ..+..... ++... ........ ..+...... .+..+.+.++++|+|+|+|++
T Consensus 146 -~~~-----------~~~~~~~~-------~~~~~---~~~~~~~~---~~~~~~~~~-~~~~~~~~~i~~P~lii~G~~ 199 (251)
T 2wtm_A 146 -LLG-----------LKFDPENI-------PDELD---AWDGRKLK---GNYVRVAQT-IRVEDFVDKYTKPVLIVHGDQ 199 (251)
T ss_dssp -ETT-----------EECBTTBC-------CSEEE---ETTTEEEE---THHHHHHTT-CCHHHHHHHCCSCEEEEEETT
T ss_pred -hcc-----------ccCCchhc-------chHHh---hhhccccc---hHHHHHHHc-cCHHHHHHhcCCCEEEEEeCC
Confidence 000 00000000 00000 00000000 011111111 355566788999999999999
Q ss_pred Ccch--hhhHHHhhhccccCceEEEEcCchhhhHhHH----HHHHHHhhhh
Q 022316 253 SPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGF----LVLLASFCES 297 (299)
Q Consensus 253 D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f----~~~~~~~~~~ 297 (299)
|.++ +.++.+.+.+++ ++++++|++||.. .+. .+.+..|+++
T Consensus 200 D~~v~~~~~~~~~~~~~~--~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~ 247 (251)
T 2wtm_A 200 DEAVPYEASVAFSKQYKN--CKLVTIPGDTHCY-DHHLELVTEAVKEFMLE 247 (251)
T ss_dssp CSSSCHHHHHHHHHHSSS--EEEEEETTCCTTC-TTTHHHHHHHHHHHHHH
T ss_pred CCCcChHHHHHHHHhCCC--cEEEEECCCCccc-chhHHHHHHHHHHHHHH
Confidence 9997 567777777753 8999999999998 664 4555566654
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-30 Score=212.93 Aligned_cols=258 Identities=13% Similarity=0.085 Sum_probs=157.8
Q ss_pred ceeecCCceEEEEeccCCC-------C--CeEEEecccccchhhhccccccCchhhhccc---C-ce---EEEEECCCCC
Q 022316 23 NLIKTSHGSLSVTIYGDQD-------K--PALVTYPDLALNYMSCFQGLFFCPEACSLLL---H-NF---CIYHINPPGH 86 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~-------~--p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~---~-~~---~vi~~D~~G~ 86 (299)
.++..++.+|+|..+|+.+ + |+|||+||++.+... |.+.+..+.. + || +|+++|+|||
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~------~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~ 97 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVV------WEYYLPRLVAADAEGNYAIDKVLLIDQVNH 97 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGG------GGGGGGGSCCCBTTTTEEEEEEEEECCTTS
T ss_pred cccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHH------HHHHHHHHHHhhhhcCcceeEEEEEcCCCC
Confidence 3444566799999998643 3 689999999988754 6444434331 2 78 9999999999
Q ss_pred CCCCCCCCC-CCCcccHHHHHHHHHHHHHhcC----CCc--EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcc-
Q 022316 87 EFGAAAISD-DEPVLSVDDLADQIAEVLNHFG----LGA--VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS- 158 (299)
Q Consensus 87 G~S~~~~~~-~~~~~~~~~~~~~l~~~l~~l~----~~~--~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~- 158 (299)
|.|..+... ....+++.++++|+.++++.+. .++ ++|+||||||.+++.+|.++|++|+++|++++......
T Consensus 98 G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 177 (398)
T 2y6u_A 98 GDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKA 177 (398)
T ss_dssp HHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCC
T ss_pred CCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccc
Confidence 988643211 1235899999999999998744 444 99999999999999999999999999999998765411
Q ss_pred -------h-------hHHHHhhhhhhhHH-hhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhccc------
Q 022316 159 -------W-------TEWLYNKVMSNLLY-YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ------ 217 (299)
Q Consensus 159 -------~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 217 (299)
. ..... ..+..... ...........+....+... ..++..+.+........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 249 (398)
T 2y6u_A 178 IGAGRPGLPPDSPQIPENLY-NSLRLKTCDHFANESEYVKYMRNGSFFTN-------AHSQILQNIIDFERTKASGDDED 249 (398)
T ss_dssp CSCCCTTCCTTCCCCCHHHH-HHHHHTCCCEESSHHHHHHHHHHTSTTTT-------SCHHHHHHHHHHHEEC-------
T ss_pred cccccccccccccccchhhH-HHhhhhccccCCCHHHHHHHhhcCccccc-------CCHHHHHHHHHhcCccccccccC
Confidence 0 00000 00000000 00000111011111111111 02444444433211000
Q ss_pred c------cchHHHHHhhcC----CCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHh
Q 022316 218 S------SNVWHFLEAING----RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLL 285 (299)
Q Consensus 218 ~------~~~~~~~~~~~~----~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 285 (299)
. .........+.. ..+....+.++++|+|+|+|++|.++ +.++.+.+.+++ +++++++++||.++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~--~~~~~~~~~gH~~~~ 327 (398)
T 2y6u_A 250 GGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQN--YHLDVIPGGSHLVNV 327 (398)
T ss_dssp -CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCSS--EEEEEETTCCTTHHH
T ss_pred CCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCCC--ceEEEeCCCCccchh
Confidence 0 000111111111 11234567889999999999999997 567777777764 899999999999887
Q ss_pred HHHH----HHHHhhh
Q 022316 286 GFLV----LLASFCE 296 (299)
Q Consensus 286 ~f~~----~~~~~~~ 296 (299)
+-.+ .+..|++
T Consensus 328 e~p~~~~~~i~~fl~ 342 (398)
T 2y6u_A 328 EAPDLVIERINHHIH 342 (398)
T ss_dssp HSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH
Confidence 6444 4445554
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-33 Score=222.34 Aligned_cols=129 Identities=16% Similarity=0.221 Sum_probs=107.6
Q ss_pred CCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC-CCC
Q 022316 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DEP 98 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-~~~ 98 (299)
.+.+++++++.+++|...| ++|+|||+||++.+... |... ...+.+||+|+++|+||||.|..+... ...
T Consensus 5 ~~~~~~~~~g~~~~~~~~g--~~p~vv~lHG~~~~~~~------~~~~-~~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~ 75 (304)
T 3b12_A 5 FERRLVDVGDVTINCVVGG--SGPALLLLHGFPQNLHM------WARV-APLLANEYTVVCADLRGYGGSSKPVGAPDHA 75 (304)
Confidence 3456778888899999988 67899999999887643 6444 455668999999999999999753210 023
Q ss_pred cccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
.++++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.....
T Consensus 76 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 134 (304)
T 3b12_A 76 NYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYV 134 (304)
Confidence 58999999999999999999999999999999999999999999999999999876543
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-29 Score=196.33 Aligned_cols=241 Identities=14% Similarity=0.125 Sum_probs=157.3
Q ss_pred CCCcceeec----CCceEEEEeccCC--CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCC
Q 022316 19 SGKDNLIKT----SHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 19 ~~~~~~i~~----~~~~l~~~~~g~~--~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~ 91 (299)
+.+...+++ ++.+++|...++. ++|+|||+||++.+... . +...+...+ ..||+|+++|+||||.|..
T Consensus 8 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~----~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~ 82 (270)
T 3llc_A 8 PIETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTG----T-KALEMDDLAASLGVGAIRFDYSGHGASGG 82 (270)
T ss_dssp CEEEEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTTS----H-HHHHHHHHHHHHTCEEEEECCTTSTTCCS
T ss_pred CCCcceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCcccccc----c-hHHHHHHHHHhCCCcEEEeccccCCCCCC
Confidence 344556666 7779999865533 28999999999877533 1 112234444 5699999999999999964
Q ss_pred CCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH---cc---CcccEEEEecCCCCCcchhHHHHh
Q 022316 92 AISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK---YR---HRVLGLILVSPLCKAPSWTEWLYN 165 (299)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~---~p---~~v~~lvl~~~~~~~~~~~~~~~~ 165 (299)
.. ..++++++++|+.++++.++.++++|+|||+||.+++.+|.+ +| ++|+++|++++.........+
T Consensus 83 ~~----~~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~--- 155 (270)
T 3llc_A 83 AF----RDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIE--- 155 (270)
T ss_dssp CG----GGCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTG---
T ss_pred cc----ccccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhh---
Confidence 32 358999999999999999999999999999999999999999 99 999999999987643211100
Q ss_pred hhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccE
Q 022316 166 KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 245 (299)
.................... .. +................. .+....+.++++|+
T Consensus 156 ---------~~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~ 209 (270)
T 3llc_A 156 ---------PLLGDRERAELAENGYFEEV-SE---------------YSPEPNIFTRALMEDGRA-NRVMAGMIDTGCPV 209 (270)
T ss_dssp ---------GGCCHHHHHHHHHHSEEEEC-CT---------------TCSSCEEEEHHHHHHHHH-TCCTTSCCCCCSCE
T ss_pred ---------hhhhhhhhhhhhccCcccCh-hh---------------cccchhHHHHHHHhhhhh-hhhhhhhhcCCCCE
Confidence 00111110111111111000 00 000000001111111111 22335577899999
Q ss_pred EEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhH-----hHHHHHHHHhhhh
Q 022316 246 LIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISL-----LGFLVLLASFCES 297 (299)
Q Consensus 246 lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~-----~~f~~~~~~~~~~ 297 (299)
++++|++|.++ +.+..+.+.+++.++++++++++||... .++.+.+..|+++
T Consensus 210 l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 210 HILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp EEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred EEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 99999999997 6777888888665689999999999533 2345556666654
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-28 Score=200.00 Aligned_cols=134 Identities=13% Similarity=0.189 Sum_probs=100.9
Q ss_pred CCCCCcceeecCCc-eEEEEeccC--------CCCCeEEEecccccchhhhccccccCchhh------hcccCceEEEEE
Q 022316 17 PPSGKDNLIKTSHG-SLSVTIYGD--------QDKPALVTYPDLALNYMSCFQGLFFCPEAC------SLLLHNFCIYHI 81 (299)
Q Consensus 17 ~~~~~~~~i~~~~~-~l~~~~~g~--------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~------~~l~~~~~vi~~ 81 (299)
..+.+.+.+.+.+| .+++....+ +++|+|||+||++.+... |..... .+...||+|+++
T Consensus 24 ~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~------~~~~~~~~~~a~~l~~~G~~vi~~ 97 (377)
T 1k8q_A 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATN------WISNLPNNSLAFILADAGYDVWLG 97 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGG------GSSSCTTTCHHHHHHHTTCEEEEC
T ss_pred CCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhh------hhcCCCcccHHHHHHHCCCCEEEe
Confidence 34556677777655 677776632 267899999999888754 433322 344568999999
Q ss_pred CCCCCCCCCCCC---CC--CCCcccHHHHHH-HHHHHH----HhcCCCcEEEEeeCccHHHHHHHHHHccC---cccEEE
Q 022316 82 NPPGHEFGAAAI---SD--DEPVLSVDDLAD-QIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLI 148 (299)
Q Consensus 82 D~~G~G~S~~~~---~~--~~~~~~~~~~~~-~l~~~l----~~l~~~~~~lvG~S~Gg~va~~~a~~~p~---~v~~lv 148 (299)
|+||||.|.... +. ....++++++++ |+.+++ +.++.++++|+||||||.+++.+|.++|+ +|+++|
T Consensus 98 D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lv 177 (377)
T 1k8q_A 98 NSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFY 177 (377)
T ss_dssp CCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEE
T ss_pred cCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEE
Confidence 999999996521 11 111478999988 777755 45788999999999999999999999998 899999
Q ss_pred EecCCCCC
Q 022316 149 LVSPLCKA 156 (299)
Q Consensus 149 l~~~~~~~ 156 (299)
++++....
T Consensus 178 l~~~~~~~ 185 (377)
T 1k8q_A 178 ALAPVATV 185 (377)
T ss_dssp EESCCSCC
T ss_pred EeCCchhc
Confidence 99987654
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.8e-28 Score=198.51 Aligned_cols=123 Identities=12% Similarity=0.116 Sum_probs=103.7
Q ss_pred ceeecCCceEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccC----------ceEEEEECCCCCCCCC
Q 022316 23 NLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH----------NFCIYHINPPGHEFGA 90 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~----------~~~vi~~D~~G~G~S~ 90 (299)
+.++.++.+|+|...++ +++++|||+||++++... |... ...|.+ +|+|+++|+||||.|.
T Consensus 71 ~~~~i~g~~i~~~~~~~~~~~~~plll~HG~~~s~~~------~~~~-~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~ 143 (388)
T 4i19_A 71 FTTEIDGATIHFLHVRSPEPDATPMVITHGWPGTPVE------FLDI-IGPLTDPRAHGGDPADAFHLVIPSLPGFGLSG 143 (388)
T ss_dssp EEEEETTEEEEEEEECCSSTTCEEEEEECCTTCCGGG------GHHH-HHHHHCGGGGTSCGGGCEEEEEECCTTSGGGC
T ss_pred EEEEECCeEEEEEEccCCCCCCCeEEEECCCCCCHHH------HHHH-HHHHhCcccccCCCCCCeEEEEEcCCCCCCCC
Confidence 45567888999987743 467899999999988755 6444 455555 9999999999999997
Q ss_pred CCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 91 AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
.+.. ..++++++++++.++++.++.++++++||||||.+++.+|.++|++|++++++++...
T Consensus 144 ~~~~---~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 205 (388)
T 4i19_A 144 PLKS---AGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTN 205 (388)
T ss_dssp CCSS---CCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCC
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCC
Confidence 5422 2579999999999999999999999999999999999999999999999999997554
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=198.46 Aligned_cols=234 Identities=12% Similarity=0.026 Sum_probs=156.1
Q ss_pred CCCcceeecCCceEEEEeccCC--CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~--~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
..++.+++.++.+|+|..+++. +.|+|||+||++.+... .+|...+..+...||+|+++|+||+|.|..+.
T Consensus 21 ~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~----~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--- 93 (270)
T 3pfb_A 21 GMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNT----SLLREIANSLRDENIASVRFDFNGHGDSDGKF--- 93 (270)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSSEEEEEEECCTTCCTTC----HHHHHHHHHHHHTTCEEEEECCTTSTTSSSCG---
T ss_pred cceEEEeccCCEEEEEEEEcCCCCCCCEEEEEcCCCCCccc----cHHHHHHHHHHhCCcEEEEEccccccCCCCCC---
Confidence 3455677778889999998864 35789999999877411 22434434444569999999999999996432
Q ss_pred CCcccHHHHHHHHHHHHHhc----CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 97 EPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
..+++.++++|+.++++.+ +.++++|+||||||.+++.+|.++|++|+++|+++|........... ..
T Consensus 94 -~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~---~~---- 165 (270)
T 3pfb_A 94 -ENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEG---NT---- 165 (270)
T ss_dssp -GGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHT---EE----
T ss_pred -CccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhh---hh----
Confidence 3578999999999999887 66899999999999999999999999999999999865322110000 00
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 252 (299)
. ...+....... . .................. .+....+.++++|+++++|++
T Consensus 166 ~-------------~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~ 217 (270)
T 3pfb_A 166 Q-------------GVTYNPDHIPD-----R---------LPFKDLTLGGFYLRIAQQ-LPIYEVSAQFTKPVCLIHGTD 217 (270)
T ss_dssp T-------------TEECCTTSCCS-----E---------EEETTEEEEHHHHHHHHH-CCHHHHHTTCCSCEEEEEETT
T ss_pred h-------------ccccCcccccc-----c---------ccccccccchhHhhcccc-cCHHHHHhhCCccEEEEEcCC
Confidence 0 00000000000 0 000000000001111111 355566788999999999999
Q ss_pred Ccch--hhhHHHhhhccccCceEEEEcCchhhhHhH----HHHHHHHhhhh
Q 022316 253 SPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLG----FLVLLASFCES 297 (299)
Q Consensus 253 D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----f~~~~~~~~~~ 297 (299)
|.++ +.+..+.+.+++ +++++++++||....+ +.+.+..|+++
T Consensus 218 D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 266 (270)
T 3pfb_A 218 DTVVSPNASKKYDQIYQN--STLHLIEGADHCFSDSYQKNAVNLTTDFLQN 266 (270)
T ss_dssp CSSSCTHHHHHHHHHCSS--EEEEEETTCCTTCCTHHHHHHHHHHHHHHC-
T ss_pred CCCCCHHHHHHHHHhCCC--CeEEEcCCCCcccCccchHHHHHHHHHHHhh
Confidence 9997 667777777654 8999999999998655 55555666654
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=198.21 Aligned_cols=246 Identities=11% Similarity=0.152 Sum_probs=158.0
Q ss_pred cCCCCCCCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCC
Q 022316 12 DMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 12 ~~~~~~~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~ 91 (299)
+.++....+++..+..++.++.|.. | ++|+|||+||++.+... |...+..+...||+|+++|+||+|.|..
T Consensus 13 ~~~~~~~~m~~~~~~~~g~~~~~~~-g--~~~~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~G~G~s~~ 83 (270)
T 3rm3_A 13 GLVPRGSHMSEQYPVLSGAEPFYAE-N--GPVGVLLVHGFTGTPHS------MRPLAEAYAKAGYTVCLPRLKGHGTHYE 83 (270)
T ss_dssp --------CCCSSCCCTTCCCEEEC-C--SSEEEEEECCTTCCGGG------THHHHHHHHHTTCEEEECCCTTCSSCHH
T ss_pred CccccccccCCCccCCCCCcccccC-C--CCeEEEEECCCCCChhH------HHHHHHHHHHCCCEEEEeCCCCCCCCcc
Confidence 3344444555666677777777764 4 57899999999887744 5444444445599999999999999864
Q ss_pred CCCCCCCcccHHHHHHHHHHHHHhcC--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhh
Q 022316 92 AISDDEPVLSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (299)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~l~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (299)
+. ..++++++++|+.++++.+. .++++|+|||+||.+++.+|.++|+ |+++|+++++..............
T Consensus 84 ~~----~~~~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~-- 156 (270)
T 3rm3_A 84 DM----ERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGG-- 156 (270)
T ss_dssp HH----HTCCHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC----
T ss_pred cc----ccCCHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcch--
Confidence 21 24789999999999999987 7899999999999999999999999 999999999776543322111000
Q ss_pred hhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEe
Q 022316 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 249 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 249 (299)
....++.... .... ...... ......+...+....... .+....+.++++|+|+++
T Consensus 157 ---------------~~~~~~~~~~-~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~lii~ 212 (270)
T 3rm3_A 157 ---------------ELPRYLDSIG-SDLK--NPDVKE---LAYEKTPTASLLQLARLM---AQTKAKLDRIVCPALIFV 212 (270)
T ss_dssp ----------------CCSEEECCC-CCCS--CTTCCC---CCCSEEEHHHHHHHHHHH---HHHHHTGGGCCSCEEEEE
T ss_pred ---------------hHHHHHHHhC-cccc--ccchHh---hcccccChhHHHHHHHHH---HHHHhhhhhcCCCEEEEE
Confidence 0000000000 0000 000000 000000001111111111 133455778899999999
Q ss_pred cCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhH-----HHHHHHHhhhh
Q 022316 250 GESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLG-----FLVLLASFCES 297 (299)
Q Consensus 250 G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-----f~~~~~~~~~~ 297 (299)
|++|.++ +....+.+.+++.+++++++|++||....+ +.+.+..|+++
T Consensus 213 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 267 (270)
T 3rm3_A 213 SDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAK 267 (270)
T ss_dssp ETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHH
T ss_pred CCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHh
Confidence 9999997 667788888876557999999999998753 56677777765
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=180.13 Aligned_cols=188 Identities=15% Similarity=0.199 Sum_probs=147.0
Q ss_pred CCcceeecCCceEE---EEeccCCCCCeEEEecccccchhhhccccccCc--hhhhcccCceEEEEECCCCCCCC---CC
Q 022316 20 GKDNLIKTSHGSLS---VTIYGDQDKPALVTYPDLALNYMSCFQGLFFCP--EACSLLLHNFCIYHINPPGHEFG---AA 91 (299)
Q Consensus 20 ~~~~~i~~~~~~l~---~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~--~~~~~l~~~~~vi~~D~~G~G~S---~~ 91 (299)
.++.+++.++.+++ |...| ++|+||++||++.+... |.. .+..+...||+|+++|+||+|.| ..
T Consensus 4 ~~~~~~~~~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~~------~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~ 75 (207)
T 3bdi_A 4 LQEEFIDVNGTRVFQRKMVTDS--NRRSIALFHGYSFTSMD------WDKADLFNNYSKIGYNVYAPDYPGFGRSASSEK 75 (207)
T ss_dssp CEEEEEEETTEEEEEEEECCTT--CCEEEEEECCTTCCGGG------GGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTT
T ss_pred ceeEEEeeCCcEEEEEEEeccC--CCCeEEEECCCCCCccc------cchHHHHHHHHhCCCeEEEEcCCcccccCcccC
Confidence 45677888888999 55555 67899999999887643 544 44444456899999999999988 43
Q ss_pred CCCCCCCcc-cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhh
Q 022316 92 AISDDEPVL-SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (299)
Q Consensus 92 ~~~~~~~~~-~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (299)
+. ..+ +++++++++..+++.++.++++++|||+||.+++.+|.++|++++++++++|......
T Consensus 76 ~~----~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------ 139 (207)
T 3bdi_A 76 YG----IDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVESL------------ 139 (207)
T ss_dssp TC----CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGGG------------
T ss_pred CC----CCcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccch------------
Confidence 22 235 8999999999999999999999999999999999999999999999999998632110
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEec
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 250 (299)
...+.++++|+++++|
T Consensus 140 ----------------------------------------------------------------~~~~~~~~~p~l~i~g 155 (207)
T 3bdi_A 140 ----------------------------------------------------------------KGDMKKIRQKTLLVWG 155 (207)
T ss_dssp ----------------------------------------------------------------HHHHTTCCSCEEEEEE
T ss_pred ----------------------------------------------------------------hHHHhhccCCEEEEEE
Confidence 1223457799999999
Q ss_pred CCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhH----HHHHHHHhhhh
Q 022316 251 ESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLG----FLVLLASFCES 297 (299)
Q Consensus 251 ~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----f~~~~~~~~~~ 297 (299)
++|.++ +..+.+.+.++. .+++++++++|..+.+ +.+.+..|+++
T Consensus 156 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 156 SKDHVVPIALSKEYASIISG--SRLEIVEGSGHPVYIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp TTCTTTTHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred CCCCccchHHHHHHHHhcCC--ceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 999997 566677776743 8899999999998765 44455566553
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=187.93 Aligned_cols=218 Identities=16% Similarity=0.178 Sum_probs=140.9
Q ss_pred CCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 39 ~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
+.++|+|||+||++.+... | ..+...+.++|+|+++|+||||.|.... ..++++++++++.++++.++.
T Consensus 17 ~~~~~~vv~~HG~~~~~~~------~-~~~~~~l~~~~~v~~~d~~G~G~s~~~~----~~~~~~~~~~~~~~~l~~~~~ 85 (267)
T 3fla_A 17 PDARARLVCLPHAGGSASF------F-FPLAKALAPAVEVLAVQYPGRQDRRHEP----PVDSIGGLTNRLLEVLRPFGD 85 (267)
T ss_dssp TTCSEEEEEECCTTCCGGG------G-HHHHHHHTTTEEEEEECCTTSGGGTTSC----CCCSHHHHHHHHHHHTGGGTT
T ss_pred CCCCceEEEeCCCCCCchh------H-HHHHHHhccCcEEEEecCCCCCCCCCCC----CCcCHHHHHHHHHHHHHhcCC
Confidence 3467899999999887643 6 3445667778999999999999986432 257999999999999999999
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCc----ccEEEEecCCCCCcchhHHHH---hhhhhhhHHhhcchhHHHHHHHHhhhc
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLY---NKVMSNLLYYYGMCGVVKELLLKRYFS 191 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (299)
++++|+||||||.+|+.+|.++|++ +++++++++............ .......+.... ... ...+.
T Consensus 86 ~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~ 158 (267)
T 3fla_A 86 RPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLG--GSD-----AAMLA 158 (267)
T ss_dssp SCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTC--HHH-----HHHHH
T ss_pred CceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhc--Ccc-----hhhcc
Confidence 9999999999999999999999987 999999987654322110000 000000000000 000 00000
Q ss_pred cccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhcccc
Q 022316 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR 269 (299)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~ 269 (299)
+++..+.+...+.. .......+.. .. ..++++|+++|+|++|.++ +....+.+.+++
T Consensus 159 ----------~~~~~~~~~~~~~~-----~~~~~~~~~~----~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 217 (267)
T 3fla_A 159 ----------DPELLAMVLPAIRS-----DYRAVETYRH----EP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG- 217 (267)
T ss_dssp ----------SHHHHHHHHHHHHH-----HHHHHHHCCC----CT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS-
T ss_pred ----------CHHHHHHHHHHHHH-----HHHhhhcccc----cc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC-
Confidence 12222222111110 0111111111 11 1678999999999999997 566666766654
Q ss_pred CceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 270 YSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 270 ~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.++++++++ ||..+.+..+.+...+.
T Consensus 218 ~~~~~~~~g-gH~~~~~~~~~~~~~i~ 243 (267)
T 3fla_A 218 PADLRVLPG-GHFFLVDQAAPMIATMT 243 (267)
T ss_dssp CEEEEEESS-STTHHHHTHHHHHHHHH
T ss_pred CceEEEecC-CceeeccCHHHHHHHHH
Confidence 388999998 99998876655554443
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-28 Score=195.13 Aligned_cols=230 Identities=7% Similarity=-0.041 Sum_probs=142.7
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccC--ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG 117 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 117 (299)
+++|+|||+||++.+... |.+.+..+... ||+|+++|+||||.|..+ ..++++++++++.++++.+
T Consensus 34 ~~~~~vvllHG~~~~~~~------~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~-----~~~~~~~~~~~l~~~~~~~- 101 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSYS------FRHLLEYINETHPGTVVTVLDLFDGRESLRP-----LWEQVQGFREAVVPIMAKA- 101 (302)
T ss_dssp -CCCCEEEECCTTCCGGG------GHHHHHHHHHHSTTCCEEECCSSCSGGGGSC-----HHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCeEEEECCCCCChhH------HHHHHHHHHhcCCCcEEEEeccCCCccchhh-----HHHHHHHHHHHHHHHhhcC-
Confidence 367899999999988744 64443333344 799999999999988542 2368999999999999988
Q ss_pred CCcEEEEeeCccHHHHHHHHHHccC-cccEEEEecCCCCCcchh-HHHHhhhhhhhHHhhcchhHHHHHHHHhhh----c
Q 022316 118 LGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKAPSWT-EWLYNKVMSNLLYYYGMCGVVKELLLKRYF----S 191 (299)
Q Consensus 118 ~~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 191 (299)
.++++|+||||||.+++.+|.++|+ +|+++|+++++....... .+.. ..... ............... .
T Consensus 102 ~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~ 175 (302)
T 1pja_A 102 PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLK-WLFPT-----SMRSNLYRICYSPWGQEFSI 175 (302)
T ss_dssp TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHH-HHCTT-----CCHHHHHHHHTSTTGGGSTG
T ss_pred CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhh-hHHHH-----HHHHHHhhccchHHHHHhhh
Confidence 7899999999999999999999999 799999999876543211 1110 00000 000000000000000 0
Q ss_pred cccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCC---CChhhhhccccccEEEEecCCCcch--hhhHHHhhhc
Q 022316 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR---PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKI 266 (299)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~ 266 (299)
..... ++.....+.. ...+...+...... .++.+.+.+++ |+++|+|++|.++ +.+..+.+..
T Consensus 176 ~~~~~-----~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~ 243 (302)
T 1pja_A 176 CNYWH-----DPHHDDLYLN------ASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYD 243 (302)
T ss_dssp GGGBC-----CTTCHHHHHH------HCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEEC
T ss_pred hhccc-----Chhhhhhhhc------cchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcC
Confidence 00000 0111111111 01111111111110 12356688999 9999999999997 4444443332
Q ss_pred cc-------------------------cCceEEEEcCchhhhHhHHHHHHHHhhhhcC
Q 022316 267 DR-------------------------RYSALVEVWTRVYISLLGFLVLLASFCESEF 299 (299)
Q Consensus 267 ~~-------------------------~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~~ 299 (299)
+. +.++++++|++||.++.|-.+.++..+.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 244 ANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp TTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred CcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 21 2388999999999999888888777766653
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-26 Score=188.75 Aligned_cols=121 Identities=12% Similarity=0.190 Sum_probs=96.8
Q ss_pred ceeecCCceEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhccc-------CceEEEEECCCCCCCCCCCC
Q 022316 23 NLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-------HNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-------~~~~vi~~D~~G~G~S~~~~ 93 (299)
..+++++.+|+|...|+ +++++|||+||++++... |.+.+ ..|. .||+|+++|+||||.|+.+.
T Consensus 88 ~~~~i~g~~i~~~~~~~~~~~~~pllllHG~~~s~~~------~~~~~-~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~ 160 (408)
T 3g02_A 88 FTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVE------FYPIL-QLFREEYTPETLPFHLVVPSLPGYTFSSGPP 160 (408)
T ss_dssp EEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGG------GHHHH-HHHHHHCCTTTCCEEEEEECCTTSTTSCCSC
T ss_pred EEEEECCEEEEEEEecCCCCCCCeEEEECCCCCcHHH------HHHHH-HHHhcccccccCceEEEEECCCCCCCCCCCC
Confidence 45666888999999875 467899999999988755 64443 4443 37999999999999997542
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCC-cEEEEeeCccHHHHHHHHHHccCcccEEEEecC
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP 152 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~-~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~ 152 (299)
....++++++++++.++++.++.+ +++++||||||.+++.+|.++|+.+..++.+++
T Consensus 161 --~~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~ 218 (408)
T 3g02_A 161 --LDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCN 218 (408)
T ss_dssp --SSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred --CCCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCC
Confidence 123589999999999999999997 999999999999999999999775544444443
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=181.78 Aligned_cols=189 Identities=14% Similarity=0.195 Sum_probs=144.5
Q ss_pred CCcceeecCCceEEEEeccC---CCCCeEEEecccccchhhhccccccCc--hhhhcccCceEEEEECCCCCCCCCCCCC
Q 022316 20 GKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCP--EACSLLLHNFCIYHINPPGHEFGAAAIS 94 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~--~~~~~l~~~~~vi~~D~~G~G~S~~~~~ 94 (299)
.++.+++.++.+++|..+++ +++|+||++||++.+... |.. ....+...||+|+++|+||+|.|....
T Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~------~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~- 79 (210)
T 1imj_A 7 QREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSET------WQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAA- 79 (210)
T ss_dssp ECCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHH------HHHHTHHHHHHHTTCEEEEECCTTSGGGTTSC-
T ss_pred cccceEeeCCeEEEEEEeCCCCCCCCceEEEECCCCCccce------eecchhHHHHHHCCCeEEEecCCCCCCCCCCC-
Confidence 34567888888999998754 357899999999988754 433 233444568999999999999886532
Q ss_pred CCCCcccHHHHH--HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 95 DDEPVLSVDDLA--DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 95 ~~~~~~~~~~~~--~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
...++++.+ +++..+++.++.++++++|||+||.+++.+|.++|++++++|++++.....
T Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~--------------- 141 (210)
T 1imj_A 80 ---APAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK--------------- 141 (210)
T ss_dssp ---CSSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG---------------
T ss_pred ---CcchhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc---------------
Confidence 235566666 899999999999999999999999999999999999999999999864200
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 252 (299)
.....+.++++|+++++|++
T Consensus 142 ------------------------------------------------------------~~~~~~~~~~~p~l~i~g~~ 161 (210)
T 1imj_A 142 ------------------------------------------------------------INAANYASVKTPALIVYGDQ 161 (210)
T ss_dssp ------------------------------------------------------------SCHHHHHTCCSCEEEEEETT
T ss_pred ------------------------------------------------------------ccchhhhhCCCCEEEEEcCc
Confidence 01122356789999999999
Q ss_pred Ccch--hhhHHHhhhccccCceEEEEcCchhhhHhHH----HHHHHHhhhh
Q 022316 253 SPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGF----LVLLASFCES 297 (299)
Q Consensus 253 D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f----~~~~~~~~~~ 297 (299)
|. + +..+.+ +.+++ .+++++++++|..+.+. .+.+..|+++
T Consensus 162 D~-~~~~~~~~~-~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 162 DP-MGQTSFEHL-KQLPN--HRVLIMKGAGHPCYLDKPEEWHTGLLDFLQG 208 (210)
T ss_dssp CH-HHHHHHHHH-TTSSS--EEEEEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred cc-CCHHHHHHH-hhCCC--CCEEEecCCCcchhhcCHHHHHHHHHHHHHh
Confidence 99 8 556666 66644 88999999999987654 4455566553
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-27 Score=182.28 Aligned_cols=216 Identities=11% Similarity=0.009 Sum_probs=143.7
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc-cHHHHHHHHHHHHHhcCCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL-SVDDLADQIAEVLNHFGLG 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~-~~~~~~~~l~~~l~~l~~~ 119 (299)
++|+|||+||++.+... |...+..+...||+|+++|+||||.|..... ... +++++++|+.++++.+...
T Consensus 21 ~~~~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~d~~~~i~~l~~~ 91 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPND------MNFMARALQRSGYGVYVPLFSGHGTVEPLDI---LTKGNPDIWWAESSAAVAHMTAK 91 (251)
T ss_dssp SSEEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEECCCTTCSSSCTHHH---HHHCCHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEeCCCCCCHHH------HHHHHHHHHHCCCEEEecCCCCCCCCChhhh---cCcccHHHHHHHHHHHHHHHHHh
Confidence 67899999999888754 5344344444699999999999998853211 123 8888899998888877654
Q ss_pred --cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccC
Q 022316 120 --AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 197 (299)
Q Consensus 120 --~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
+++++||||||.+++.+|.++|++++++++++|.................. . ........ .
T Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~--------------~-~~~~~~~~--~ 154 (251)
T 3dkr_A 92 YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEY--------------M-NRLAGKSD--E 154 (251)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHH--------------H-HHHHTCCC--C
T ss_pred cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHH--------------H-HhhcccCc--c
Confidence 999999999999999999999999999999998776543221111111000 0 00111000 0
Q ss_pred CCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccc-cCceEE
Q 022316 198 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR-RYSALV 274 (299)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~-~~~~~~ 274 (299)
...........+ ....... ......+.++++|+++++|++|.++ +....+.+.++. ..++++
T Consensus 155 ----~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 219 (251)
T 3dkr_A 155 ----STQILAYLPGQL--------AAIDQFA---TTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFH 219 (251)
T ss_dssp ----HHHHHHHHHHHH--------HHHHHHH---HHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEE
T ss_pred ----hhhHHhhhHHHH--------HHHHHHH---HHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEE
Confidence 011111111111 0000000 1134457788999999999999998 667778888876 567999
Q ss_pred EEcCchhhhHhH-----HHHHHHHhhhh
Q 022316 275 EVWTRVYISLLG-----FLVLLASFCES 297 (299)
Q Consensus 275 ~~~~~~H~~~~~-----f~~~~~~~~~~ 297 (299)
++++++|..+.+ +.+.+..|+++
T Consensus 220 ~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 247 (251)
T 3dkr_A 220 WYDDAKHVITVNSAHHALEEDVIAFMQQ 247 (251)
T ss_dssp EETTCCSCTTTSTTHHHHHHHHHHHHHT
T ss_pred EeCCCCcccccccchhHHHHHHHHHHHh
Confidence 999999988654 56777788765
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.6e-27 Score=185.20 Aligned_cols=219 Identities=14% Similarity=0.039 Sum_probs=137.2
Q ss_pred CeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc-CCCcE
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-GLGAV 121 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~ 121 (299)
|+|||+||++.+... |.+. ...|.++|+|+++|+||||.|.... ..++++++++++.++++.+ +.+++
T Consensus 52 ~~lvllHG~~~~~~~------~~~l-~~~L~~~~~v~~~D~~G~G~S~~~~----~~~~~~~~a~~~~~~l~~~~~~~~~ 120 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSA------FRGW-QERLGDEVAVVPVQLPGRGLRLRER----PYDTMEPLAEAVADALEEHRLTHDY 120 (280)
T ss_dssp EEEEEECCTTCCGGG------GTTH-HHHHCTTEEEEECCCTTSGGGTTSC----CCCSHHHHHHHHHHHHHHTTCSSSE
T ss_pred ceEEEECCCCCChHH------HHHH-HHhcCCCceEEEEeCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHhCCCCCE
Confidence 789999999887744 6444 5667779999999999999986432 3579999999999999999 77899
Q ss_pred EEEeeCccHHHHHHHHHHccCccc----EEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccc-ccc
Q 022316 122 MCMGVTAGAYILTLFAMKYRHRVL----GLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE-VRG 196 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~p~~v~----~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 196 (299)
+|+||||||.+|+.+|.++|+++. .++++++........... ......... . .+..+.... ...
T Consensus 121 ~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~---------~~~~~~~~~-~-~~~~~~~~~~~~~ 189 (280)
T 3qmv_A 121 ALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRAD---------HTLSDTALR-E-VIRDLGGLDDADT 189 (280)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCG---------GGSCHHHHH-H-HHHHHTCCC----
T ss_pred EEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccc---------cccCHHHHH-H-HHHHhCCCChhhh
Confidence 999999999999999999999887 788777544221110000 000000000 0 001100000 000
Q ss_pred CCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEE
Q 022316 197 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALV 274 (299)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~ 274 (299)
. +++..+.+.. .+......... .. ...+.++++|+++|+|++|.++ +....+.+.+++. ..++
T Consensus 190 ~----~~~~~~~~~~--------~~~~~~~~~~~-~~-~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~ 254 (280)
T 3qmv_A 190 L----GAAYFDRRLP--------VLRADLRACER-YD-WHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGS-FLRR 254 (280)
T ss_dssp ---------CCTTHH--------HHHHHHHHHHT-CC-CCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSC-EEEE
T ss_pred c----CHHHHHHHHH--------HHHHHHHHHHh-cc-ccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCc-eEEE
Confidence 0 0000000000 00011111111 01 1225689999999999999987 5556666666542 5666
Q ss_pred EEcCchhhhHh--HHHHHHHHhhhhcC
Q 022316 275 EVWTRVYISLL--GFLVLLASFCESEF 299 (299)
Q Consensus 275 ~~~~~~H~~~~--~f~~~~~~~~~~~~ 299 (299)
+++ +||..+. +..+.++..+.+++
T Consensus 255 ~~~-ggH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 255 HLP-GNHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp EEE-EETTGGGSSHHHHHHHHHHHTTC
T ss_pred Eec-CCCeEEcCchhHHHHHHHHHhhC
Confidence 666 5999999 88888888887653
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=187.90 Aligned_cols=115 Identities=11% Similarity=0.205 Sum_probs=85.1
Q ss_pred ceEEEEecc-C-CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEEC----CCCCCCCCCCCCCCCCcccHH
Q 022316 30 GSLSVTIYG-D-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN----PPGHEFGAAAISDDEPVLSVD 103 (299)
Q Consensus 30 ~~l~~~~~g-~-~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D----~~G~G~S~~~~~~~~~~~~~~ 103 (299)
..++|..+| + +.+|+|||+||++.+... . .+| ..+.+.+..||+|+++| +||||.|.. ....+
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~--~-~~~-~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~-------~~~~~ 92 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLS--F-DYF-TNLAEELQGDWAFVQVEVPSGKIGSGPQDH-------AHDAE 92 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTC--S-TTH-HHHHHHHTTTCEEEEECCGGGBTTSCSCCH-------HHHHH
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccc--h-hHH-HHHHHHHHCCcEEEEEeccCCCCCCCCccc-------cCcHH
Confidence 678888777 3 356899999999876422 1 124 33455667899999995 599998842 12334
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHH--HccCcccEEEEecCCCC
Q 022316 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM--KYRHRVLGLILVSPLCK 155 (299)
Q Consensus 104 ~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~--~~p~~v~~lvl~~~~~~ 155 (299)
++.+.+..+.+.+++++++|+||||||.+|+.+|. .+|++|+++|++++...
T Consensus 93 d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 93 DVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCD 146 (335)
T ss_dssp HHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCccc
Confidence 44444444555588999999999999999999999 57999999999998653
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-27 Score=191.59 Aligned_cols=125 Identities=16% Similarity=0.105 Sum_probs=94.0
Q ss_pred ceEEEEeccCCCCCeEEEecccccchhhhccccccC-----------chhhhcccCceEEEEECCCCCCCCCCCCCCC--
Q 022316 30 GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC-----------PEACSLLLHNFCIYHINPPGHEFGAAAISDD-- 96 (299)
Q Consensus 30 ~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~-----------~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~-- 96 (299)
..+.|...+.+++|+|||+||++.+....... .|. ..+..+..+||+|+++|+||||.|.......
T Consensus 38 ~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 116 (354)
T 2rau_A 38 ISLHKVNLIGGGNDAVLILPGTWSSGEQLVTI-SWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLS 116 (354)
T ss_dssp EEEEEEEETTCCEEEEEEECCTTCCHHHHHHS-EETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGG
T ss_pred eEEEeecccCCCCCEEEEECCCCCCccccccc-cccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccc
Confidence 35666665556788999999999887532101 133 3333444568999999999999986422100
Q ss_pred -CCcccHHHHHHHHHHHHHh----cCCCcEEEEeeCccHHHHHHHHHHc-cCcccEEEEecCCCC
Q 022316 97 -EPVLSVDDLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCK 155 (299)
Q Consensus 97 -~~~~~~~~~~~~l~~~l~~----l~~~~~~lvG~S~Gg~va~~~a~~~-p~~v~~lvl~~~~~~ 155 (299)
...++++++++|+.++++. ++.++++++||||||.+++.+|.++ |++|+++|++++.+.
T Consensus 117 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~ 181 (354)
T 2rau_A 117 FTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPT 181 (354)
T ss_dssp GGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCB
T ss_pred cccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEeccccc
Confidence 0147889999999998887 5789999999999999999999999 999999999976544
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.9e-26 Score=171.39 Aligned_cols=195 Identities=18% Similarity=0.128 Sum_probs=138.4
Q ss_pred CCCcceeecCCceEEEEeccCC---CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (299)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~ 95 (299)
..++..+...++++.+..+.+. +.|+||++||.+..+....... |......+...||+|+++|+||+|.|.....
T Consensus 5 ~~~~~~~~~~~g~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~- 82 (208)
T 3trd_A 5 TNEDFLIQGPVGQLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKV-VTTLAKALDELGLKTVRFNFRGVGKSQGRYD- 82 (208)
T ss_dssp SSSCEEEECSSSEEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHH-HHHHHHHHHHTTCEEEEECCTTSTTCCSCCC-
T ss_pred ccceEEEECCCceEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCch-HHHHHHHHHHCCCEEEEEecCCCCCCCCCcc-
Confidence 3456677777779988877654 5679999999654433322222 4334344445699999999999999865422
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhh
Q 022316 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (299)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (299)
......+++.+.+..+.+.++.++++++||||||.+++.++ ++| +|+++|++++...
T Consensus 83 -~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~-------------------- 139 (208)
T 3trd_A 83 -NGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVF-------------------- 139 (208)
T ss_dssp -TTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTT--------------------
T ss_pred -chHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccc--------------------
Confidence 22344566666666666666778999999999999999999 777 8999999998660
Q ss_pred cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcc
Q 022316 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 255 (299)
. . ....+..+++|+++++|++|.+
T Consensus 140 -----------------~---------~------------------------------~~~~~~~~~~p~l~i~g~~D~~ 163 (208)
T 3trd_A 140 -----------------Y---------E------------------------------GFASLTQMASPWLIVQGDQDEV 163 (208)
T ss_dssp -----------------S---------G------------------------------GGTTCCSCCSCEEEEEETTCSS
T ss_pred -----------------c---------C------------------------------CchhhhhcCCCEEEEECCCCCC
Confidence 0 0 0012344589999999999999
Q ss_pred h--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 256 H--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
+ +..+++.+.++.. ++++++++++|....+. +.+...+.
T Consensus 164 ~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~-~~~~~~i~ 204 (208)
T 3trd_A 164 VPFEQVKAFVNQISSP-VEFVVMSGASHFFHGRL-IELRELLV 204 (208)
T ss_dssp SCHHHHHHHHHHSSSC-CEEEEETTCCSSCTTCH-HHHHHHHH
T ss_pred CCHHHHHHHHHHccCc-eEEEEeCCCCCcccccH-HHHHHHHH
Confidence 7 6677777777644 89999999999887664 44444443
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-25 Score=172.40 Aligned_cols=212 Identities=11% Similarity=-0.046 Sum_probs=145.9
Q ss_pred ceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC-----
Q 022316 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE----- 97 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~----- 97 (299)
..++.++..+.+...+. .+|+||++||++.+... |...+..+...||.|+++|+||+|.|........
T Consensus 6 ~~~~~~g~~~~~~~~~~-~~~~vv~~hG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~ 78 (238)
T 1ufo_A 6 ERLTLAGLSVLARIPEA-PKALLLALHGLQGSKEH------ILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYV 78 (238)
T ss_dssp EEEEETTEEEEEEEESS-CCEEEEEECCTTCCHHH------HHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHH
T ss_pred cccccCCEEEEEEecCC-CccEEEEECCCcccchH------HHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchh
Confidence 34556666664443332 77899999999987754 4333334445589999999999998864322110
Q ss_pred --CcccHHHHHHHHHHHHHhc---CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 98 --PVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 98 --~~~~~~~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
...++++.++|+.++++.+ +.++++++|||+||.+++.+|.++|+.+.+++++++..........
T Consensus 79 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~---------- 148 (238)
T 1ufo_A 79 EEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQ---------- 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTC----------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhhh----------
Confidence 0014677788887777664 4589999999999999999999999999999988876543211100
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccc-cccEEEEecC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFVGE 251 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~G~ 251 (299)
+ . . .++ ... ... .+....+.++ ++|+++++|+
T Consensus 149 -----------------~---~--~----~~~-~~~----------------~~~----~~~~~~~~~~~~~P~l~i~g~ 181 (238)
T 1ufo_A 149 -----------------V---V--E----DPG-VLA----------------LYQ----APPATRGEAYGGVPLLHLHGS 181 (238)
T ss_dssp -----------------C---C--C----CHH-HHH----------------HHH----SCGGGCGGGGTTCCEEEEEET
T ss_pred -----------------c---c--C----Ccc-cch----------------hhc----CChhhhhhhccCCcEEEEECC
Confidence 0 0 0 011 000 000 2333445677 8999999999
Q ss_pred CCcch--hhhHHHhhhcc-cc---CceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 252 SSPFH--SEAVHMTSKID-RR---YSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 252 ~D~~~--~~~~~~~~~~~-~~---~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+|.++ +.+..+.+.++ .. +++++++++++|....+..+.+.+|+++.
T Consensus 182 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~ 234 (238)
T 1ufo_A 182 RDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHW 234 (238)
T ss_dssp TCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred CCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHH
Confidence 99997 66777777776 22 48999999999999988888888887654
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=174.22 Aligned_cols=192 Identities=10% Similarity=0.066 Sum_probs=137.8
Q ss_pred cceeecCCceEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 22 DNLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
+..+..+++++.+..+.+ ++.|+||++||++..+....... |......+...||.|+++|+||+|.|.....
T Consensus 25 ~~~~~~~~g~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~----- 98 (249)
T 2i3d_A 25 EVIFNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQI-VYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD----- 98 (249)
T ss_dssp EEEEEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHH-HHHHHHHHHHTTCEEEEECCTTSTTCCSCCC-----
T ss_pred EEEEECCCceEEEEEEcCCCCCCCEEEEECCCcccCCCccchH-HHHHHHHHHHCCCEEEEECCCCCCCCCCCCC-----
Confidence 778888888887666543 45688999999876543322222 3344344446699999999999999865322
Q ss_pred ccHHHHHHHHHHHHHhcC-----CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHh
Q 022316 100 LSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~-----~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
.+..++ +|+.++++.+. .++++++||||||.+++.+|.++|+ |+++|++++......
T Consensus 99 ~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~---------------- 160 (249)
T 2i3d_A 99 HGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD---------------- 160 (249)
T ss_dssp SSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC----------------
T ss_pred CccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh----------------
Confidence 344444 66666665542 2479999999999999999999998 999999998653100
Q ss_pred hcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCc
Q 022316 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 254 (299)
...+.++++|+++++|++|.
T Consensus 161 ------------------------------------------------------------~~~~~~~~~P~lii~G~~D~ 180 (249)
T 2i3d_A 161 ------------------------------------------------------------FSFLAPCPSSGLIINGDADK 180 (249)
T ss_dssp ------------------------------------------------------------CTTCTTCCSCEEEEEETTCS
T ss_pred ------------------------------------------------------------hhhhcccCCCEEEEEcCCCC
Confidence 01134678999999999999
Q ss_pred ch--hhhHHHhhhccc---cCceEEEEcCchhhhH---hHHHHHHHHhhhh
Q 022316 255 FH--SEAVHMTSKIDR---RYSALVEVWTRVYISL---LGFLVLLASFCES 297 (299)
Q Consensus 255 ~~--~~~~~~~~~~~~---~~~~~~~~~~~~H~~~---~~f~~~~~~~~~~ 297 (299)
++ +..+.+.+.++. .+++++++|+++|... .++.+.+..|+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~i~~fl~~ 231 (249)
T 2i3d_A 181 VAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDR 231 (249)
T ss_dssp SSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhccCCceeEEEECCCCcccccCHHHHHHHHHHHHHH
Confidence 97 567777777753 1589999999999875 3455666666654
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-26 Score=173.66 Aligned_cols=201 Identities=13% Similarity=0.159 Sum_probs=143.8
Q ss_pred CCCCCCCcceeecCCceEEEEeccC-CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEE--CCCCCCCCCC
Q 022316 15 TPPPSGKDNLIKTSHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI--NPPGHEFGAA 91 (299)
Q Consensus 15 ~~~~~~~~~~i~~~~~~l~~~~~g~-~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~--D~~G~G~S~~ 91 (299)
...-..++.+++.++.+++|...|+ +..|+||++||++.+... | ..+...+.+||.|+++ |+||+|.|..
T Consensus 10 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~------~-~~~~~~l~~g~~v~~~~~d~~g~g~s~~ 82 (226)
T 2h1i_A 10 GVDLGTENLYFQSNAMMKHVFQKGKDTSKPVLLLLHGTGGNELD------L-LPLAEIVDSEASVLSVRGNVLENGMPRF 82 (226)
T ss_dssp -----CCCHHHHHHSSSCEEEECCSCTTSCEEEEECCTTCCTTT------T-HHHHHHHHTTSCEEEECCSEEETTEEES
T ss_pred cccccceeeeecCCCceeEEecCCCCCCCcEEEEEecCCCChhH------H-HHHHHHhccCceEEEecCcccCCcchhh
Confidence 3344556677788888999999886 467899999999977643 5 3335566669999999 9999997743
Q ss_pred CCCCCCCcccHHHHHHHHH---HHH----Hhc--CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHH
Q 022316 92 AISDDEPVLSVDDLADQIA---EVL----NHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW 162 (299)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~---~~l----~~l--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 162 (299)
........++..++.+++. +++ +.. +.++++++|||+||.+++.+|.++|++++++|++++......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---- 158 (226)
T 2h1i_A 83 FRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG---- 158 (226)
T ss_dssp SCEEETTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS----
T ss_pred ccccCccCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc----
Confidence 1111112345555544433 333 344 448999999999999999999999999999999998643211
Q ss_pred HHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccc
Q 022316 163 LYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 242 (299)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 242 (299)
. .....++
T Consensus 159 -------------------------------------------------------------------~-----~~~~~~~ 166 (226)
T 2h1i_A 159 -------------------------------------------------------------------M-----QLANLAG 166 (226)
T ss_dssp -------------------------------------------------------------------C-----CCCCCTT
T ss_pred -------------------------------------------------------------------c-----ccccccC
Confidence 0 0012357
Q ss_pred ccEEEEecCCCcch--hhhHHHhhhcccc--CceEEEEcCchhhhHhHHHHHHHHhhhhcC
Q 022316 243 CRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVWTRVYISLLGFLVLLASFCESEF 299 (299)
Q Consensus 243 ~P~lii~G~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~f~~~~~~~~~~~~ 299 (299)
+|+++++|++|.++ +..+.+.+.++.. ..++ ++++++|....+..+.+..|+++.+
T Consensus 167 ~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 167 KSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLTMGEVEKAKEWYDKAF 226 (226)
T ss_dssp CEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCCHHHHHHHHHHHHHHC
T ss_pred CcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCCHHHHHHHHHHHHHhC
Confidence 89999999999997 5677777777532 3455 9999999999999999999988753
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=184.75 Aligned_cols=251 Identities=11% Similarity=0.044 Sum_probs=144.8
Q ss_pred CCCCcceeecCCceEEEEec--cCCCCCeEEEecccccchhhhccccccCchhh-hcccCceEEEEECCCCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEAC-SLLLHNFCIYHINPPGHEFGAAAIS 94 (299)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~--g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~-~~l~~~~~vi~~D~~G~G~S~~~~~ 94 (299)
.+.+...++.+++.+....+ +.++.|+||++||++.+... |...+. .++..||+|+++|+||+|.|.....
T Consensus 133 ~~~~~~~i~~~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~------~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~ 206 (405)
T 3fnb_A 133 IPLKSIEVPFEGELLPGYAIISEDKAQDTLIVVGGGDTSRED------LFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGL 206 (405)
T ss_dssp CCCEEEEEEETTEEEEEEEECCSSSCCCEEEEECCSSCCHHH------HHHHTHHHHHHTTCEEEEECCTTSTTGGGGTC
T ss_pred CCcEEEEEeECCeEEEEEEEcCCCCCCCEEEEECCCCCCHHH------HHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCC
Confidence 34556677778877764433 33345899999998777654 323222 5567899999999999999853211
Q ss_pred CCCCcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 95 DDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
... .+..+|+.++++.+.. ++++|+||||||.+++.+|.++| +|+++|+++|........... +...
T Consensus 207 ----~~~-~~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~----~~~~- 275 (405)
T 3fnb_A 207 ----HFE-VDARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRIS----FSTA- 275 (405)
T ss_dssp ----CCC-SCTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHH----CC---
T ss_pred ----CCC-ccHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHh----hhhh-
Confidence 111 2446777778887776 79999999999999999999999 899999999877542211100 0000
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 252 (299)
...... ....+.. ..... +......+..................+.. ......+.++++|+|+|+|++
T Consensus 276 --~~~p~~----~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~PvLii~G~~ 343 (405)
T 3fnb_A 276 --LKAPKT----ILKWGSK-LVTSV----NKVAEVNLNKYAWQFGQVDFITSVNEVLE-QAQIVDYNKIDVPSLFLVGAG 343 (405)
T ss_dssp -----------------------CC----CHHHHHHHHHHHHHHTSSSHHHHHHHHHH-HCCCCCGGGCCSCEEEEEETT
T ss_pred --hhCcHH----HHHHHHH-Hhhcc----chhHHHHHHHhhhhcCCCCHHHHHHHHHH-hhcccCHhhCCCCEEEEecCC
Confidence 000000 0000000 00000 11111111111111111112111111111 011112678999999999999
Q ss_pred Ccch--hhhHHHhhhcc--ccCceEEEE---cCchhhhHhH----HHHHHHHhhhh
Q 022316 253 SPFH--SEAVHMTSKID--RRYSALVEV---WTRVYISLLG----FLVLLASFCES 297 (299)
Q Consensus 253 D~~~--~~~~~~~~~~~--~~~~~~~~~---~~~~H~~~~~----f~~~~~~~~~~ 297 (299)
|.++ +.+..+.+.++ +..++++++ ++++|....+ +.+.+..|+++
T Consensus 344 D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~ 399 (405)
T 3fnb_A 344 EDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNH 399 (405)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHH
T ss_pred CcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHH
Confidence 9986 67777888775 334779999 5555555444 44555566654
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=179.19 Aligned_cols=218 Identities=14% Similarity=0.051 Sum_probs=147.8
Q ss_pred cceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
...+..++.++.+..+++...|+||++||++.+... |...+..+...||.|+++|+||+|.|..+. ..++
T Consensus 8 ~~~~~~~g~~l~~~~~~p~~~p~vv~~HG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~----~~~~ 77 (290)
T 3ksr_A 8 SIEIPVGQDELSGTLLTPTGMPGVLFVHGWGGSQHH------SLVRAREAVGLGCICMTFDLRGHEGYASMR----QSVT 77 (290)
T ss_dssp EEEEEETTEEEEEEEEEEESEEEEEEECCTTCCTTT------THHHHHHHHTTTCEEECCCCTTSGGGGGGT----TTCB
T ss_pred eEEecCCCeEEEEEEecCCCCcEEEEeCCCCCCcCc------HHHHHHHHHHCCCEEEEeecCCCCCCCCCc----cccc
Confidence 345666788999988886678899999999877643 544444444559999999999999986532 2478
Q ss_pred HHHHHHHHHHHHHhcCC------CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhh
Q 022316 102 VDDLADQIAEVLNHFGL------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~------~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (299)
+.++++|+.++++.+.. ++++|+||||||.+++.+|.++| ++++++++|........ ..
T Consensus 78 ~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~--~~----------- 142 (290)
T 3ksr_A 78 RAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHW--DQ----------- 142 (290)
T ss_dssp HHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCT--TS-----------
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhh--hc-----------
Confidence 89999999999988732 48999999999999999999988 89999998876543210 00
Q ss_pred cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcc
Q 022316 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 255 (299)
.... ... . ... ..+....... ...+....+.++++|+|+++|++|.+
T Consensus 143 --~~~~----~~~--~-----------~~~-~~~~~~~~~~-------------~~~~~~~~~~~~~~P~lii~G~~D~~ 189 (290)
T 3ksr_A 143 --PKVS----LNA--D-----------PDL-MDYRRRALAP-------------GDNLALAACAQYKGDVLLVEAENDVI 189 (290)
T ss_dssp --BHHH----HHH--S-----------TTH-HHHTTSCCCG-------------GGCHHHHHHHHCCSEEEEEEETTCSS
T ss_pred --cccc----ccC--C-----------hhh-hhhhhhhhhh-------------ccccHHHHHHhcCCCeEEEEecCCcc
Confidence 0000 000 0 000 0000000000 00223344677899999999999999
Q ss_pred h--hhhHHHhhhcccc-CceEEEEcCchhhhH-----hHHHHHHHHhhhh
Q 022316 256 H--SEAVHMTSKIDRR-YSALVEVWTRVYISL-----LGFLVLLASFCES 297 (299)
Q Consensus 256 ~--~~~~~~~~~~~~~-~~~~~~~~~~~H~~~-----~~f~~~~~~~~~~ 297 (299)
+ +....+.+.++.. +++++++++++|... .++.+.+..|+++
T Consensus 190 v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 239 (290)
T 3ksr_A 190 VPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTE 239 (290)
T ss_dssp SCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHH
Confidence 8 5677777777542 367999999999653 2345566666654
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=170.12 Aligned_cols=249 Identities=12% Similarity=0.077 Sum_probs=148.0
Q ss_pred eeec-CCceEEEEeccCC---CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 24 LIKT-SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 24 ~i~~-~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
.+.. ++.++++..+.+. ++|+||++||++..... . ..|...+.+.+.++|+|+++|+||+|.+.. .
T Consensus 7 ~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~--~-~~~~~~~~~~l~~~~~v~~~d~~~~~~~~~-------~ 76 (275)
T 3h04_A 7 KVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGK--A-NDLSPQYIDILTEHYDLIQLSYRLLPEVSL-------D 76 (275)
T ss_dssp EEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCC--T-TCSCHHHHHHHTTTEEEEEECCCCTTTSCH-------H
T ss_pred EEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCc--h-hhhHHHHHHHHHhCceEEeeccccCCcccc-------c
Confidence 3444 5568888887542 56789999998832211 1 114345566777779999999999986631 3
Q ss_pred ccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchh
Q 022316 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
...+++.+.+..+.+.++.++++|+||||||.+++.+|.+ ++|+++|+++|................... .. ...
T Consensus 77 ~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~- 151 (275)
T 3h04_A 77 CIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKI-AQ-SIN- 151 (275)
T ss_dssp HHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHH-HT-TSC-
T ss_pred hhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhcc-cc-cch-
Confidence 5677788888888888888999999999999999999998 789999999998766322111100000000 00 011
Q ss_pred HHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHh----hcCCCChhhhhccccccEEEEecCCCcc
Q 022316 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA----INGRPDISEGLRKLQCRSLIFVGESSPF 255 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~P~lii~G~~D~~ 255 (299)
......+........................ ..+...... ..........+.+++ |+|+++|++|.+
T Consensus 152 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~ 222 (275)
T 3h04_A 152 ---ETMIAQLTSPTPVVQDQIAQRFLIYVYARGT-----GKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYD 222 (275)
T ss_dssp ---HHHHHTTSCSSCCSSCSSGGGHHHHHHHHHH-----TCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSS
T ss_pred ---HHHHhcccCCCCcCCCccccchhhhhhhhhc-----CchHHhhccccccccccccccchhccCC-CEEEEecCCCCC
Confidence 1111111111111100000011000000000 001110100 000011223356777 999999999999
Q ss_pred h--hhhHHHhhhccccCceEEEEcCchhhhHh-------HHHHHHHHhhhhc
Q 022316 256 H--SEAVHMTSKIDRRYSALVEVWTRVYISLL-------GFLVLLASFCESE 298 (299)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-------~f~~~~~~~~~~~ 298 (299)
+ +.+..+.+.++. .+++++|+++|.... ++.+.+..|+++.
T Consensus 223 ~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~ 272 (275)
T 3h04_A 223 VPVEESEHIMNHVPH--STFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAI 272 (275)
T ss_dssp SCTHHHHHHHTTCSS--EEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHhcCC--ceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHH
Confidence 8 777788887765 779999999997654 5677777887753
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-24 Score=175.63 Aligned_cols=227 Identities=12% Similarity=0.087 Sum_probs=147.2
Q ss_pred CCceEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC---------
Q 022316 28 SHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD--------- 95 (299)
Q Consensus 28 ~~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~--------- 95 (299)
++.+|++..+.+ ++.|+||++||++.+... |. ....++..||.|+++|+||+|.|..+...
T Consensus 91 ~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~~------~~-~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~ 163 (346)
T 3fcy_A 91 RGARIHAKYIKPKTEGKHPALIRFHGYSSNSGD------WN-DKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGH 163 (346)
T ss_dssp GGCEEEEEEEEESCSSCEEEEEEECCTTCCSCC------SG-GGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCS
T ss_pred CCCEEEEEEEecCCCCCcCEEEEECCCCCCCCC------hh-hhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCcc
Confidence 445788776643 356799999999887643 53 33467788999999999999988653211
Q ss_pred -------CCCcccHHHHHHHHHHHHHhc------CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHH
Q 022316 96 -------DEPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW 162 (299)
Q Consensus 96 -------~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 162 (299)
....+.+.+..+|+..+++.+ +.++++++|||+||.+++.+|.++|+ |+++|+++|........ +
T Consensus 164 ~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~~~-~ 241 (346)
T 3fcy_A 164 IIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYKRV-W 241 (346)
T ss_dssp SSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHHHH-H
T ss_pred eeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHHHH-h
Confidence 122344556666666655443 33689999999999999999999998 99999998864321100 0
Q ss_pred HHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccc
Q 022316 163 LYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 242 (299)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 242 (299)
. . ........ .+..++...... . .........+.. .+....+.+++
T Consensus 242 ~------~---~~~~~~~~---~~~~~~~~~~~~------~---------------~~~~~~~~~~~~-~d~~~~~~~i~ 287 (346)
T 3fcy_A 242 D------L---DLAKNAYQ---EITDYFRLFDPR------H---------------ERENEVFTKLGY-IDVKNLAKRIK 287 (346)
T ss_dssp H------T---TCCCGGGH---HHHHHHHHHCTT------C---------------TTHHHHHHHHGG-GCHHHHGGGCC
T ss_pred h------c---cccccchH---HHHHHHHhcCCC------c---------------chHHHHHHHhCc-ccHHHHHHhcC
Confidence 0 0 00000000 001111100000 0 000011111111 34556678899
Q ss_pred ccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 243 CRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 243 ~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+|+|+++|++|.++ +.+..+.+.+.+ +++++++|+++|..+.++.+.+..|+++-
T Consensus 288 ~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 288 GDVLMCVGLMDQVCPPSTVFAAYNNIQS-KKDIKVYPDYGHEPMRGFGDLAMQFMLEL 344 (346)
T ss_dssp SEEEEEEETTCSSSCHHHHHHHHTTCCS-SEEEEEETTCCSSCCTTHHHHHHHHHHTT
T ss_pred CCEEEEeeCCCCcCCHHHHHHHHHhcCC-CcEEEEeCCCCCcCHHHHHHHHHHHHHHh
Confidence 99999999999998 666677777764 58999999999999988999999998763
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-23 Score=160.05 Aligned_cols=198 Identities=14% Similarity=0.056 Sum_probs=134.1
Q ss_pred CCCcceeecCCceEEEEeccCC-----CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~-----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
..+...+.+.++++.+..+.+. +.|+||++||++..+....... |......+...||.|+++|+||+|.|....
T Consensus 9 ~~~~~~~~~~~g~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 87 (220)
T 2fuk_A 9 ESAALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKV-VTMAARALRELGITVVRFNFRSVGTSAGSF 87 (220)
T ss_dssp SCEEEEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHH-HHHHHHHHHTTTCEEEEECCTTSTTCCSCC
T ss_pred cceEEEEeCCCCeEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchH-HHHHHHHHHHCCCeEEEEecCCCCCCCCCc
Confidence 3455677778888876665432 2678999999764432222222 333333444569999999999999986432
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHH
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (299)
. ......+++.+.+..+.+..+.++++++|||+||.+++.++.++ +|+++|++++......
T Consensus 88 ~--~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~--------------- 148 (220)
T 2fuk_A 88 D--HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD--------------- 148 (220)
T ss_dssp C--TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC---------------
T ss_pred c--cCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh---------------
Confidence 1 11122333333334444444556999999999999999999988 8999999998664321
Q ss_pred hhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCC
Q 022316 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (299)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D 253 (299)
. .+ + ...+|+++++|++|
T Consensus 149 --------------------~-------------------------------------~~----~-~~~~p~l~i~g~~D 166 (220)
T 2fuk_A 149 --------------------F-------------------------------------SD----V-QPPAQWLVIQGDAD 166 (220)
T ss_dssp --------------------C-------------------------------------TT----C-CCCSSEEEEEETTC
T ss_pred --------------------h-------------------------------------hh----c-ccCCcEEEEECCCC
Confidence 0 00 0 11569999999999
Q ss_pred cch--hhhHHHhhhccccCceEEEEcCchhhhHhH---HHHHHHHhhhhcC
Q 022316 254 PFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLG---FLVLLASFCESEF 299 (299)
Q Consensus 254 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~---f~~~~~~~~~~~~ 299 (299)
.++ +..+++.+.+. .+++++++++++|....+ +.+.+..|+++++
T Consensus 167 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~l 216 (220)
T 2fuk_A 167 EIVDPQAVYDWLETLE-QQPTLVRMPDTSHFFHRKLIDLRGALQHGVRRWL 216 (220)
T ss_dssp SSSCHHHHHHHHTTCS-SCCEEEEETTCCTTCTTCHHHHHHHHHHHHGGGC
T ss_pred cccCHHHHHHHHHHhC-cCCcEEEeCCCCceehhhHHHHHHHHHHHHHHHh
Confidence 997 66777777774 348999999999987653 4566677776653
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=170.62 Aligned_cols=197 Identities=10% Similarity=-0.016 Sum_probs=141.2
Q ss_pred CCcceeecCCceEEEEeccCC-CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 20 GKDNLIKTSHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~-~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
.++..++.++.++.+..+.+. +.|+||++||++.+.... .|......+...||.|+++|+||+|.|.........
T Consensus 12 ~~~~~~~~~g~~l~~~~~~p~~~~p~vv~~hG~~~~~~~~----~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~ 87 (223)
T 2o2g_A 12 EYAVSVSVGEVKLKGNLVIPNGATGIVLFAHGSGSSRYSP----RNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHL 87 (223)
T ss_dssp EEEEEEEETTEEEEEEEECCTTCCEEEEEECCTTCCTTCH----HHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCSS
T ss_pred eeEEEEecCCeEEEEEEecCCCCceEEEEecCCCCCCCcc----chHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhcc
Confidence 344566667788988877654 578999999998776431 111222333345899999999999987532111112
Q ss_pred cccHHHHHHHHHHHHHhcCCC------cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 99 VLSVDDLADQIAEVLNHFGLG------AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~------~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
.++++++++|+.++++.+..+ +++++|||+||.+++.+|.++|++++++|++++....
T Consensus 88 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~---------------- 151 (223)
T 2o2g_A 88 RFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDL---------------- 151 (223)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGG----------------
T ss_pred cCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCc----------------
Confidence 278899999999988876543 8999999999999999999999999999999973210
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 252 (299)
....+.++++|+++++|++
T Consensus 152 -------------------------------------------------------------~~~~~~~~~~P~l~i~g~~ 170 (223)
T 2o2g_A 152 -------------------------------------------------------------APSALPHVKAPTLLIVGGY 170 (223)
T ss_dssp -------------------------------------------------------------CTTTGGGCCSCEEEEEETT
T ss_pred -------------------------------------------------------------CHHHHhcCCCCEEEEEccc
Confidence 0012456789999999999
Q ss_pred Ccch-hhhHHHhhhccccCceEEEEcCchhhhHh-----HHHHHHHHhhhhc
Q 022316 253 SPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLL-----GFLVLLASFCESE 298 (299)
Q Consensus 253 D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-----~f~~~~~~~~~~~ 298 (299)
|.++ ....+..+... .+.+++++++++|.... ++.+.+..|+++.
T Consensus 171 D~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 221 (223)
T 2o2g_A 171 DLPVIAMNEDALEQLQ-TSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHY 221 (223)
T ss_dssp CHHHHHHHHHHHHHCC-SSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHhhC-CCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHh
Confidence 9998 33444444443 34889999999997544 3667777777654
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=166.53 Aligned_cols=183 Identities=16% Similarity=0.131 Sum_probs=132.2
Q ss_pred EEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEE--CCCCCCCCCCCCCCCCCccc---HHHHHH
Q 022316 33 SVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI--NPPGHEFGAAAISDDEPVLS---VDDLAD 107 (299)
Q Consensus 33 ~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~--D~~G~G~S~~~~~~~~~~~~---~~~~~~ 107 (299)
++...+.++.|+||++||++.+... | ..+...+.++|.|+++ |++|+|.|..........++ +.+.++
T Consensus 53 ~~~~~~~~~~p~vv~~HG~~~~~~~------~-~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 125 (251)
T 2r8b_A 53 HKSRAGVAGAPLFVLLHGTGGDENQ------F-FDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATG 125 (251)
T ss_dssp EEEECCCTTSCEEEEECCTTCCHHH------H-HHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHH
T ss_pred EEEeCCCCCCcEEEEEeCCCCCHhH------H-HHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHH
Confidence 4445554578999999999987644 5 3345666778999999 89999977421111111123 333345
Q ss_pred HHHHHHHhc----CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHH
Q 022316 108 QIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183 (299)
Q Consensus 108 ~l~~~l~~l----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (299)
++.++++.+ +.++++|+||||||.+++.+|.++|++|+++|++++......
T Consensus 126 ~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------- 180 (251)
T 2r8b_A 126 KMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-------------------------
T ss_pred HHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-------------------------
Confidence 555555444 789999999999999999999999999999999998653321
Q ss_pred HHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHH
Q 022316 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 261 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~ 261 (299)
. .....+++|+++++|++|.++ +.+++
T Consensus 181 -------------~--------------------------------------~~~~~~~~P~li~~g~~D~~~~~~~~~~ 209 (251)
T 2r8b_A 181 -------------K--------------------------------------ISPAKPTRRVLITAGERDPICPVQLTKA 209 (251)
T ss_dssp -------------C--------------------------------------CCCCCTTCEEEEEEETTCTTSCHHHHHH
T ss_pred -------------c--------------------------------------ccccccCCcEEEeccCCCccCCHHHHHH
Confidence 0 001246789999999999986 66777
Q ss_pred HhhhccccCceEE-EEcCchhhhHhHHHHHHHHhhhhc
Q 022316 262 MTSKIDRRYSALV-EVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 262 ~~~~~~~~~~~~~-~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+.+.++.....+. ++++++|....+..+.+..|+++.
T Consensus 210 ~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 210 LEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAAY 247 (251)
T ss_dssp HHHHHHHHSSEEEEEEESSCSSCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHHh
Confidence 8787763224444 788899999999889999998865
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.8e-24 Score=171.77 Aligned_cols=183 Identities=11% Similarity=0.085 Sum_probs=128.1
Q ss_pred eEEEEeccCCCCCeEEEecccccchhhhccccccCc-------hhhhcccCceEEEEECCCCCCCCCCCCCCCC------
Q 022316 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCP-------EACSLLLHNFCIYHINPPGHEFGAAAISDDE------ 97 (299)
Q Consensus 31 ~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~-------~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~------ 97 (299)
.+.|...+...+++|||+||++.++.. |.. .+..++.+||.|+++|+||||+|........
T Consensus 51 ~~~~~~p~~~~~~~vvl~HG~g~~~~~------~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~ 124 (328)
T 1qlw_A 51 YVRYQIPQRAKRYPITLIHGCCLTGMT------WETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGK 124 (328)
T ss_dssp EEEEEEETTCCSSCEEEECCTTCCGGG------GSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTS
T ss_pred EEEEEccCCCCCccEEEEeCCCCCCCc------cccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccc
Confidence 334444444456889999999977754 432 3344556799999999999999864321000
Q ss_pred ------------------------------------CcccHHH------------------HHHHHHHHHHhcCCCcEEE
Q 022316 98 ------------------------------------PVLSVDD------------------LADQIAEVLNHFGLGAVMC 123 (299)
Q Consensus 98 ------------------------------------~~~~~~~------------------~~~~l~~~l~~l~~~~~~l 123 (299)
....+++ +++++..+++.++ ++++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~l 202 (328)
T 1qlw_A 125 APASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GTVL 202 (328)
T ss_dssp SCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SEEE
T ss_pred cCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--CceE
Confidence 0000444 7788888888875 8999
Q ss_pred EeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCch
Q 022316 124 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPES 203 (299)
Q Consensus 124 vG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (299)
+||||||.+++.+|.++|++|+++|+++|...
T Consensus 203 vGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------------------------------ 234 (328)
T 1qlw_A 203 LSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------------------------------ 234 (328)
T ss_dssp EEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------------------------------------
T ss_pred EEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------------------------------------
Confidence 99999999999999999999999999997540
Q ss_pred HHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-------hhhHHHhhhccc--cCceEE
Q 022316 204 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-------SEAVHMTSKIDR--RYSALV 274 (299)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~-------~~~~~~~~~~~~--~~~~~~ 274 (299)
.+.......+++|+|+++|++|.++ +.++.+.+.++. .+++++
T Consensus 235 ----------------------------~~~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~ 286 (328)
T 1qlw_A 235 ----------------------------PKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLM 286 (328)
T ss_dssp ----------------------------CCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ----------------------------CCHHHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEE
Confidence 0000111235689999999999986 345556666641 358999
Q ss_pred EEcCch-----hhhHhHH-----HHHHHHhhhh
Q 022316 275 EVWTRV-----YISLLGF-----LVLLASFCES 297 (299)
Q Consensus 275 ~~~~~~-----H~~~~~f-----~~~~~~~~~~ 297 (299)
++|++| |..+.+- .+.+..|+++
T Consensus 287 ~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~ 319 (328)
T 1qlw_A 287 SLPALGVHGNSHMMMQDRNNLQVADLILDWIGR 319 (328)
T ss_dssp EGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHH
T ss_pred EcCCCCcCCCcccchhccCHHHHHHHHHHHHHh
Confidence 999777 9987654 5555666654
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-23 Score=172.03 Aligned_cols=226 Identities=12% Similarity=0.055 Sum_probs=151.0
Q ss_pred CCCCcceeecCCceEEEEeccCC---CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (299)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~ 94 (299)
...+...++.++.+|.+..+.+. +.|+||++||++.+... |......++..||.|+++|+||+|.|...
T Consensus 125 ~~~~~v~~~~dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~------~~~~~~~l~~~G~~v~~~d~rG~G~s~~~-- 196 (386)
T 2jbw_A 125 PPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEE------SFQMENLVLDRGMATATFDGPGQGEMFEY-- 196 (386)
T ss_dssp SCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTT------THHHHHHHHHTTCEEEEECCTTSGGGTTT--
T ss_pred CCeEEEEEEeCCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHH------HHHHHHHHHhCCCEEEEECCCCCCCCCCC--
Confidence 34555667777788887776542 45788999998866533 22334555678999999999999988321
Q ss_pred CCCCcccHHHHHHHHHHHHHh---cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhh
Q 022316 95 DDEPVLSVDDLADQIAEVLNH---FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (299)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~---l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (299)
.....++.+.+.++.+++.. ++.++++|+|||+||.+++.+|.+ |++|+++|++ +..........
T Consensus 197 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~--------- 264 (386)
T 2jbw_A 197 -KRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDL--------- 264 (386)
T ss_dssp -CCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGG---------
T ss_pred -CCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHh---------
Confidence 12347788888999888887 555899999999999999999998 8999999999 76544322110
Q ss_pred HHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecC
Q 022316 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 251 (299)
....... .....++... ..+.. . ..+.. .+....+.++++|+|+++|+
T Consensus 265 -----~~~~~~~-~~~~~~g~~~-------~~~~~---~------------~~~~~----~~~~~~~~~i~~P~Lii~G~ 312 (386)
T 2jbw_A 265 -----ETPLTKE-SWKYVSKVDT-------LEEAR---L------------HVHAA----LETRDVLSQIACPTYILHGV 312 (386)
T ss_dssp -----SCHHHHH-HHHHHTTCSS-------HHHHH---H------------HHHHH----TCCTTTGGGCCSCEEEEEET
T ss_pred -----ccHHHHH-HHHHHhCCCC-------HHHHH---H------------HHHHh----CChhhhhcccCCCEEEEECC
Confidence 0111100 1111111100 01111 0 01111 23334567889999999999
Q ss_pred CCcch--hhhHHHhhhc-cccCceEEEEcCchhhhH---hHHHHHHHHhhhh
Q 022316 252 SSPFH--SEAVHMTSKI-DRRYSALVEVWTRVYISL---LGFLVLLASFCES 297 (299)
Q Consensus 252 ~D~~~--~~~~~~~~~~-~~~~~~~~~~~~~~H~~~---~~f~~~~~~~~~~ 297 (299)
+|. + +.+.++.+.+ +. +++++++++++|... .++.+.+..|+++
T Consensus 313 ~D~-v~~~~~~~l~~~l~~~-~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 362 (386)
T 2jbw_A 313 HDE-VPLSFVDTVLELVPAE-HLNLVVEKDGDHCCHNLGIRPRLEMADWLYD 362 (386)
T ss_dssp TSS-SCTHHHHHHHHHSCGG-GEEEEEETTCCGGGGGGTTHHHHHHHHHHHH
T ss_pred CCC-CCHHHHHHHHHHhcCC-CcEEEEeCCCCcCCccchHHHHHHHHHHHHH
Confidence 999 6 6778888877 53 489999999999753 3566777777765
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.4e-24 Score=166.20 Aligned_cols=214 Identities=9% Similarity=0.042 Sum_probs=135.4
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC-C
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~ 118 (299)
+.+++|||+||++.+... |... .. +..+|+|+++|+||+|.+.. ..++++++++++.++++.+. .
T Consensus 19 ~~~~~lv~lhg~~~~~~~------~~~~-~~-l~~~~~v~~~d~~G~~~~~~------~~~~~~~~~~~~~~~i~~~~~~ 84 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFS------YASL-PR-LKSDTAVVGLNCPYARDPEN------MNCTHGAMIESFCNEIRRRQPR 84 (265)
T ss_dssp TSSEEEEEECCTTCCGGG------GTTS-CC-CSSSEEEEEEECTTTTCGGG------CCCCHHHHHHHHHHHHHHHCSS
T ss_pred CCCCEEEEECCCCCCHHH------HHHH-Hh-cCCCCEEEEEECCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCC
Confidence 356799999999988744 6444 45 78899999999999976532 13789999999999999985 4
Q ss_pred CcEEEEeeCccHHHHHHHHH---HccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccc
Q 022316 119 GAVMCMGVTAGAYILTLFAM---KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~---~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (299)
++++|+||||||.+|+.+|. .+|++|+++|++++.......... ..... .+.........
T Consensus 85 ~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~---~~~~~--------------~~~~~~~~~~~ 147 (265)
T 3ils_A 85 GPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLP---RAFYE--------------HCNSIGLFATQ 147 (265)
T ss_dssp CCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCC---HHHHH--------------HHHHTTTTTTS
T ss_pred CCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccC---HHHHH--------------HHHHHHHhCCC
Confidence 68999999999999999998 677889999999976543211000 00000 11111000000
Q ss_pred -----cCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEE-EEecCC---Ccchh---------
Q 022316 196 -----GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL-IFVGES---SPFHS--------- 257 (299)
Q Consensus 196 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l-ii~G~~---D~~~~--------- 257 (299)
.............++... ..... ... ....+++||++ +++|++ |..+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~-~~~-~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~ 213 (265)
T 3ils_A 148 PGASPDGSTEPPSYLIPHFTAVV------------DVMLD-YKL-APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFM 213 (265)
T ss_dssp SSSCSSSCSCCCTTHHHHHHHHH------------HHTTT-CCC-CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTT
T ss_pred ccccccCCHHHHHHHHHHHHHHH------------HHHHh-cCC-CCCccCCCCeEEEEEccCCCCccccCccccCcchh
Confidence 000000011111111111 11111 111 12347899988 999999 88651
Q ss_pred -------hhHHHhhhccccCceEEEEcCchhhhH--hHHHHHHHHhhhhc
Q 022316 258 -------EAVHMTSKIDRRYSALVEVWTRVYISL--LGFLVLLASFCESE 298 (299)
Q Consensus 258 -------~~~~~~~~~~~~~~~~~~~~~~~H~~~--~~f~~~~~~~~~~~ 298 (299)
....+.+..+..+++++++|++||..+ .+..+.++..++++
T Consensus 214 ~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~f 263 (265)
T 3ils_A 214 IQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRV 263 (265)
T ss_dssp TSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHH
T ss_pred hccccccCcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHH
Confidence 112233333324589999999999999 88888888877765
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-24 Score=163.85 Aligned_cols=192 Identities=10% Similarity=-0.021 Sum_probs=138.5
Q ss_pred ceeecCC-ceEEEEeccCC--CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC---
Q 022316 23 NLIKTSH-GSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD--- 96 (299)
Q Consensus 23 ~~i~~~~-~~l~~~~~g~~--~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~--- 96 (299)
..+.+.+ .++.+..+.+. +.|+||++||++.+... |......+...||.|+++|+||+|.|.......
T Consensus 6 ~~~~~~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~ 79 (236)
T 1zi8_A 6 ISIQSYDGHTFGALVGSPAKAPAPVIVIAQDIFGVNAF------MRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDER 79 (236)
T ss_dssp CCEECTTSCEECEEEECCSSCSEEEEEEECCTTBSCHH------HHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHH
T ss_pred EEEecCCCCeEEEEEECCCCCCCCEEEEEcCCCCCCHH------HHHHHHHHHhCCcEEEeccccccCCCcccccccchh
Confidence 3455544 46877777653 35789999998777543 433333444569999999999999875422111
Q ss_pred --------CCcccHHHHHHHHHHHHHhcC-----CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHH
Q 022316 97 --------EPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163 (299)
Q Consensus 97 --------~~~~~~~~~~~~l~~~l~~l~-----~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 163 (299)
....+.++.++|+.++++.+. .++++++|||+||.+++.+|.++| +++++++.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~------- 150 (236)
T 1zi8_A 80 QREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE------- 150 (236)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG-------
T ss_pred hhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc-------
Confidence 123467788889999888876 468999999999999999999998 8998887762200
Q ss_pred HhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccc
Q 022316 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 243 (299)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 243 (299)
+....+.++++
T Consensus 151 ---------------------------------------------------------------------~~~~~~~~~~~ 161 (236)
T 1zi8_A 151 ---------------------------------------------------------------------KQLNKVPEVKH 161 (236)
T ss_dssp ---------------------------------------------------------------------GCGGGGGGCCS
T ss_pred ---------------------------------------------------------------------cchhhhhhcCC
Confidence 01223567889
Q ss_pred cEEEEecCCCcch--hhhHHHhhhccc-cCceEEEEcCchhhhHh------------HHHHHHHHhhhhc
Q 022316 244 RSLIFVGESSPFH--SEAVHMTSKIDR-RYSALVEVWTRVYISLL------------GFLVLLASFCESE 298 (299)
Q Consensus 244 P~lii~G~~D~~~--~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~------------~f~~~~~~~~~~~ 298 (299)
|+++++|++|.++ +....+.+.+.. +.++++++++++|.... +..+.+.+|+++.
T Consensus 162 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 231 (236)
T 1zi8_A 162 PALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPL 231 (236)
T ss_dssp CEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHh
Confidence 9999999999997 566677776632 35899999999997653 3667777888764
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=167.66 Aligned_cols=89 Identities=20% Similarity=0.321 Sum_probs=69.1
Q ss_pred eccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh
Q 022316 36 IYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (299)
Q Consensus 36 ~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (299)
.+..+.+++|||+||++++... | ..+.+.|.++|+|+++|+||||.|..+ ..+++.+.+..+++.
T Consensus 7 ~~~~~~~~~lv~lhg~g~~~~~------~-~~~~~~L~~~~~vi~~Dl~GhG~S~~~--------~~~~~~~~~~~~~~~ 71 (242)
T 2k2q_B 7 SFDASEKTQLICFPFAGGYSAS------F-RPLHAFLQGECEMLAAEPPGHGTNQTS--------AIEDLEELTDLYKQE 71 (242)
T ss_dssp CCSTTCCCEEESSCCCCHHHHH------H-HHHHHHHCCSCCCEEEECCSSCCSCCC--------TTTHHHHHHHHTTTT
T ss_pred CCCCCCCceEEEECCCCCCHHH------H-HHHHHhCCCCeEEEEEeCCCCCCCCCC--------CcCCHHHHHHHHHHH
Confidence 3444567899999999988754 6 444667788999999999999998531 234555556666667
Q ss_pred cCC---CcEEEEeeCccHHHHHHHHHH
Q 022316 116 FGL---GAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 116 l~~---~~~~lvG~S~Gg~va~~~a~~ 139 (299)
+++ ++++|+||||||.+|+.+|.+
T Consensus 72 l~~~~~~~~~lvGhSmGG~iA~~~A~~ 98 (242)
T 2k2q_B 72 LNLRPDRPFVLFGHSMGGMITFRLAQK 98 (242)
T ss_dssp CCCCCCSSCEEECCSSCCHHHHHHHHH
T ss_pred HHhhcCCCEEEEeCCHhHHHHHHHHHH
Confidence 766 689999999999999999987
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.91 E-value=8.2e-24 Score=156.71 Aligned_cols=166 Identities=13% Similarity=0.099 Sum_probs=123.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCce---EEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF---CIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG 117 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~---~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 117 (299)
++|+|||+||++.+... |...+..+...|| +|+++|+||+|.|. ..+.+++++++.++++.++
T Consensus 2 ~~~~vv~~HG~~~~~~~------~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~--------~~~~~~~~~~~~~~~~~~~ 67 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFN------FAGIKSYLVSQGWSRDKLYAVDFWDKTGTN--------YNNGPVLSRFVQKVLDETG 67 (181)
T ss_dssp CCCCEEEECCTTCCGGG------GHHHHHHHHHTTCCGGGEEECCCSCTTCCH--------HHHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEECCcCCCHhH------HHHHHHHHHHcCCCCccEEEEecCCCCCch--------hhhHHHHHHHHHHHHHHcC
Confidence 46889999999987644 5444444445677 79999999999873 2688999999999999999
Q ss_pred CCcEEEEeeCccHHHHHHHHHHc--cCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccc
Q 022316 118 LGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (299)
Q Consensus 118 ~~~~~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (299)
.++++++||||||.+++.++.++ |++|+++|+++++...... ...
T Consensus 68 ~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~--------------------------------~~~- 114 (181)
T 1isp_A 68 AKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG--------------------------------KAL- 114 (181)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS--------------------------------BCC-
T ss_pred CCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc--------------------------------ccC-
Confidence 99999999999999999999998 9999999999986431100 000
Q ss_pred cCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcchhhhHHHhhhccccCceEEE
Q 022316 196 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVE 275 (299)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~ 275 (299)
+ . .+ ...++|+++++|++|.++.... .++++ .++++
T Consensus 115 -------~--------------------------~-~~-----~~~~~p~l~i~G~~D~~v~~~~---~~~~~--~~~~~ 150 (181)
T 1isp_A 115 -------P--------------------------G-TD-----PNQKILYTSIYSSADMIVMNYL---SRLDG--ARNVQ 150 (181)
T ss_dssp -------C--------------------------C-SC-----TTCCCEEEEEEETTCSSSCHHH---HCCBT--SEEEE
T ss_pred -------C--------------------------C-CC-----CccCCcEEEEecCCCccccccc---ccCCC--Cccee
Confidence 0 0 00 1135799999999999982221 12433 78999
Q ss_pred EcCchhhhHhH---HHHHHHHhhhh
Q 022316 276 VWTRVYISLLG---FLVLLASFCES 297 (299)
Q Consensus 276 ~~~~~H~~~~~---f~~~~~~~~~~ 297 (299)
+++++|..+.+ +.+.+..|+++
T Consensus 151 ~~~~gH~~~~~~~~~~~~i~~fl~~ 175 (181)
T 1isp_A 151 IHGVGHIGLLYSSQVNSLIKEGLNG 175 (181)
T ss_dssp ESSCCTGGGGGCHHHHHHHHHHHTT
T ss_pred eccCchHhhccCHHHHHHHHHHHhc
Confidence 99999997765 55556666654
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-24 Score=166.76 Aligned_cols=175 Identities=11% Similarity=0.040 Sum_probs=127.0
Q ss_pred CceEEEEecc-CCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHH
Q 022316 29 HGSLSVTIYG-DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (299)
Q Consensus 29 ~~~l~~~~~g-~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (299)
++.++|...+ .++.|+|||+||++.+... |...+..+...||.|+++|+||+|.+.. ....++.+
T Consensus 40 ~~~l~~p~~~~~~~~p~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~g~g~~~~--------~~~~d~~~ 105 (262)
T 1jfr_A 40 GGTIYYPTSTADGTFGAVVISPGFTAYQSS------IAWLGPRLASQGFVVFTIDTNTTLDQPD--------SRGRQLLS 105 (262)
T ss_dssp CEEEEEESCCTTCCEEEEEEECCTTCCGGG------TTTHHHHHHTTTCEEEEECCSSTTCCHH--------HHHHHHHH
T ss_pred ceeEEecCCCCCCCCCEEEEeCCcCCCchh------HHHHHHHHHhCCCEEEEeCCCCCCCCCc--------hhHHHHHH
Confidence 3577776653 3456899999999877643 5444444446699999999999987631 12233333
Q ss_pred HHHHHH------HhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHH
Q 022316 108 QIAEVL------NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVV 181 (299)
Q Consensus 108 ~l~~~l------~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (299)
.+..+. ..++.++++|+||||||.+++.+|.++|+ |+++|++++...
T Consensus 106 ~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~-------------------------- 158 (262)
T 1jfr_A 106 ALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT-------------------------- 158 (262)
T ss_dssp HHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS--------------------------
T ss_pred HHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc--------------------------
Confidence 333332 34556799999999999999999999998 999999887321
Q ss_pred HHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hh-
Q 022316 182 KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE- 258 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~- 258 (299)
...+.++++|+|+++|++|.++ +.
T Consensus 159 -----------------------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~ 185 (262)
T 1jfr_A 159 -----------------------------------------------------DKTWPELRTPTLVVGADGDTVAPVATH 185 (262)
T ss_dssp -----------------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTT
T ss_pred -----------------------------------------------------cccccccCCCEEEEecCccccCCchhh
Confidence 1123467899999999999997 55
Q ss_pred hHHHhhhccc-cCceEEEEcCchhhhHh----HHHHHHHHhhhh
Q 022316 259 AVHMTSKIDR-RYSALVEVWTRVYISLL----GFLVLLASFCES 297 (299)
Q Consensus 259 ~~~~~~~~~~-~~~~~~~~~~~~H~~~~----~f~~~~~~~~~~ 297 (299)
.+.+.+.++. ...+++++++++|.... ++.+.+..|+++
T Consensus 186 ~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 229 (262)
T 1jfr_A 186 SKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKR 229 (262)
T ss_dssp HHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHHHHHH
Confidence 7888888754 35689999999999875 456667777764
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=156.48 Aligned_cols=174 Identities=14% Similarity=0.084 Sum_probs=127.0
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCc
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (299)
.|+|||+||++.+... .|...+...+ .+||+|+++|+| .|. ..+++++++++.++++.+ .++
T Consensus 4 ~p~vv~~HG~~~~~~~-----~~~~~~~~~l~~~g~~v~~~d~~---~~~--------~~~~~~~~~~~~~~~~~~-~~~ 66 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTN-----HWFPWLKKRLLADGVQADILNMP---NPL--------QPRLEDWLDTLSLYQHTL-HEN 66 (192)
T ss_dssp CCEEEEECCTTCCTTS-----TTHHHHHHHHHHTTCEEEEECCS---CTT--------SCCHHHHHHHHHTTGGGC-CTT
T ss_pred CCEEEEEcCCCCCcch-----hHHHHHHHHHHhCCcEEEEecCC---CCC--------CCCHHHHHHHHHHHHHhc-cCC
Confidence 4569999999988741 1545544445 679999999999 232 137899999999999998 799
Q ss_pred EEEEeeCccHHHHHHHHHHccC--cccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCC
Q 022316 121 VMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA 198 (299)
Q Consensus 121 ~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (299)
++++||||||.+++.+|.++|+ +|+++|++++........ .. +..++.
T Consensus 67 ~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~-----------------~~------~~~~~~------- 116 (192)
T 1uxo_A 67 TYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTL-----------------QM------LDEFTQ------- 116 (192)
T ss_dssp EEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTC-----------------GG------GGGGTC-------
T ss_pred EEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccc-----------------hh------hhhhhh-------
Confidence 9999999999999999999999 999999999865432100 00 000000
Q ss_pred CCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEE
Q 022316 199 QVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEV 276 (299)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~ 276 (299)
...+. ..+.++++|+++++|++|.++ +.++.+.+.+ + .+++++
T Consensus 117 -------------------------------~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~--~~~~~~ 161 (192)
T 1uxo_A 117 -------------------------------GSFDH-QKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-D--AALYEV 161 (192)
T ss_dssp -------------------------------SCCCH-HHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-T--CEEEEE
T ss_pred -------------------------------cCCCH-HHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-C--ceEEEe
Confidence 00112 345678899999999999997 5667777776 3 789999
Q ss_pred cCchhhhHhHH-------HHHHHHhhhh
Q 022316 277 WTRVYISLLGF-------LVLLASFCES 297 (299)
Q Consensus 277 ~~~~H~~~~~f-------~~~~~~~~~~ 297 (299)
+++||....+- ++.+..|+++
T Consensus 162 ~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 162 QHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp TTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CCCcCcccccccccHHHHHHHHHHHHHH
Confidence 99999887542 4555555543
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=157.42 Aligned_cols=174 Identities=16% Similarity=0.098 Sum_probs=121.6
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccC--ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
+.|+|||+||++.+... . ..|...+...+.+ ||+|+++|+||++. . ++++++..+++.++.
T Consensus 3 ~~p~vv~lHG~~~~~~~--~-~~~~~~~~~~l~~~~g~~vi~~d~~g~~~-----------~---~~~~~~~~~~~~l~~ 65 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVT--T-HGWYGWVKKELEKIPGFQCLAKNMPDPIT-----------A---RESIWLPFMETELHC 65 (194)
T ss_dssp CCCEEEEECCSSSSCTT--T-STTHHHHHHHHTTSTTCCEEECCCSSTTT-----------C---CHHHHHHHHHHTSCC
T ss_pred CCCEEEEECCCCCCCcc--c-chHHHHHHHHHhhccCceEEEeeCCCCCc-----------c---cHHHHHHHHHHHhCc
Confidence 46899999999887410 0 1143434555665 99999999999631 1 246777888899998
Q ss_pred -CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccC
Q 022316 119 -GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 197 (299)
Q Consensus 119 -~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
++++|+||||||.+++.+|.++| |+++|++++......... . ....++..
T Consensus 66 ~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~---------------------~-~~~~~~~~----- 116 (194)
T 2qs9_A 66 DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN---------------------E-RASGYFTR----- 116 (194)
T ss_dssp CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH---------------------H-HHTSTTSS-----
T ss_pred CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh---------------------h-HHHhhhcc-----
Confidence 89999999999999999999999 999999998764321100 0 00111110
Q ss_pred CCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEE
Q 022316 198 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVE 275 (299)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~ 275 (299)
+ ...+.+.++.+|+++++|++|.++ +..+.+.+.+ + .++++
T Consensus 117 -----~-----------------------------~~~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~--~~~~~ 159 (194)
T 2qs9_A 117 -----P-----------------------------WQWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-E--TKLHK 159 (194)
T ss_dssp -----C-----------------------------CCHHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-T--CEEEE
T ss_pred -----c-----------------------------ccHHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C--CeEEE
Confidence 0 011223446779999999999997 6667777776 3 78999
Q ss_pred EcCchhhhHhHHHHHHH---Hhhhh
Q 022316 276 VWTRVYISLLGFLVLLA---SFCES 297 (299)
Q Consensus 276 ~~~~~H~~~~~f~~~~~---~~~~~ 297 (299)
++++||..+.+..+.++ .|+++
T Consensus 160 ~~~~gH~~~~~~p~~~~~~~~fl~~ 184 (194)
T 2qs9_A 160 FTDCGHFQNTEFHELITVVKSLLKV 184 (194)
T ss_dssp ESSCTTSCSSCCHHHHHHHHHHHTC
T ss_pred eCCCCCccchhCHHHHHHHHHHHHh
Confidence 99999998876554443 66654
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.1e-24 Score=162.92 Aligned_cols=176 Identities=11% Similarity=0.070 Sum_probs=131.9
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEE-------------------CCCCCCCCCCCCCCCCCc
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHI-------------------NPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~-------------------D~~G~G~S~~~~~~~~~~ 99 (299)
+..|+||++||++.+... |... ...+. .||.|+++ |++|+ .+.. ....
T Consensus 21 ~~~~~vv~lHG~~~~~~~------~~~~-~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~----~~~~ 88 (232)
T 1fj2_A 21 KATAAVIFLHGLGDTGHG------WAEA-FAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDS----QEDE 88 (232)
T ss_dssp CCSEEEEEECCSSSCHHH------HHHH-HHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTC----CBCH
T ss_pred CCCceEEEEecCCCccch------HHHH-HHHHhcCCcEEEecCCCccccccccccccccccccccC-Cccc----cccc
Confidence 467899999999987744 5344 44455 59999998 66666 2221 1235
Q ss_pred ccHHHHHHHHHHHHHhc---CC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHh
Q 022316 100 LSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l---~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
.++++.++++.++++.+ ++ ++++++|||+||.+++.+|.++|++|+++|++++.......
T Consensus 89 ~~~~~~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~--------------- 153 (232)
T 1fj2_A 89 SGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS--------------- 153 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG---------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc---------------
Confidence 78899999999999886 66 79999999999999999999999999999999985432110
Q ss_pred hcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCc
Q 022316 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 254 (299)
. . . ....+.++++|+++++|++|.
T Consensus 154 -------------------~--~-----~------------------------------~~~~~~~~~~P~l~i~G~~D~ 177 (232)
T 1fj2_A 154 -------------------F--P-----Q------------------------------GPIGGANRDISILQCHGDCDP 177 (232)
T ss_dssp -------------------S--C-----S------------------------------SCCCSTTTTCCEEEEEETTCS
T ss_pred -------------------c--c-----c------------------------------cccccccCCCCEEEEecCCCc
Confidence 0 0 0 001245678999999999999
Q ss_pred ch--hhhHHHhhhccc----cCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 255 FH--SEAVHMTSKIDR----RYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 255 ~~--~~~~~~~~~~~~----~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
++ +.+.++.+.+.. .+.+++++++++|....+..+.+.+|+++.
T Consensus 178 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~~~i~~~l~~~ 227 (232)
T 1fj2_A 178 LVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKL 227 (232)
T ss_dssp SSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHHHHHHHHHHHh
Confidence 97 556666666532 348899999999999888888888888764
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-23 Score=171.15 Aligned_cols=234 Identities=13% Similarity=0.090 Sum_probs=146.6
Q ss_pred CCcceeecCCceEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 20 GKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
.+...++.+++.+....+.+ ++.|+||++||++.+... +|......+...||.|+++|+||+|.|.....
T Consensus 168 ~~~v~i~~~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~-----~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~-- 240 (415)
T 3mve_A 168 IKQLEIPFEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTD-----MWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPL-- 240 (415)
T ss_dssp EEEEEEECSSSEEEEEEEESCSSSCEEEEEEECCTTSCGGG-----GHHHHHHTTGGGTCEEEEECCTTSGGGTTSCC--
T ss_pred eEEEEEEECCEEEEEEEEecCCCCCCCEEEEECCCCccHHH-----HHHHHHHHHHhCCCEEEEECCCCCCCCCCCCC--
Confidence 44556677777887665533 345799999998876433 13222233446799999999999998864221
Q ss_pred CCcccHHHHHHHHHHHHHhcC---CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch-hHHHHhhhhhhhH
Q 022316 97 EPVLSVDDLADQIAEVLNHFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSNLL 172 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~---~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~ 172 (299)
..+.+++.+++.+.++... .++++|+||||||.+++.+|..+|++|+++|+++|....... ..+.
T Consensus 241 --~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~--------- 309 (415)
T 3mve_A 241 --TEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKL--------- 309 (415)
T ss_dssp --CSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHH---------
T ss_pred --CCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHH---------
Confidence 2446677778888877765 478999999999999999999999999999999987432100 1110
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcC-CCChhhhhccccccEEEEecC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING-RPDISEGLRKLQCRSLIFVGE 251 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~lii~G~ 251 (299)
......... .+...+..... ... .+...+ ..+.. ...... ..++++|+|+|+|+
T Consensus 310 --~~~~~~~~~-~~~~~~g~~~~------~~~---~~~~~~------------~~~~~~~~~~~~-~~~i~~PvLii~G~ 364 (415)
T 3mve_A 310 --QQMPKMYLD-VLASRLGKSVV------DIY---SLSGQM------------AAWSLKVQGFLS-SRKTKVPILAMSLE 364 (415)
T ss_dssp --TTSCHHHHH-HHHHHTTCSSB------CHH---HHHHHG------------GGGCTTTTTTTT-SSCBSSCEEEEEET
T ss_pred --HHhHHHHHH-HHHHHhCCCcc------CHH---HHHHHH------------hhcCcccccccc-cCCCCCCEEEEEeC
Confidence 001111111 11111211110 011 011101 11100 001111 36889999999999
Q ss_pred CCcch--hhhHHHhhhccccCceEEEEcC-chhhhHhHHHHHHHHhhhhc
Q 022316 252 SSPFH--SEAVHMTSKIDRRYSALVEVWT-RVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~f~~~~~~~~~~~ 298 (299)
+|.++ +.+..+.+..+ +++++++++ .+|....+.++.+..|+++.
T Consensus 365 ~D~~vp~~~~~~l~~~~~--~~~l~~i~g~~~h~~~~~~~~~i~~fL~~~ 412 (415)
T 3mve_A 365 GDPVSPYSDNQMVAFFST--YGKAKKISSKTITQGYEQSLDLAIKWLEDE 412 (415)
T ss_dssp TCSSSCHHHHHHHHHTBT--TCEEEEECCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCC--CceEEEecCCCcccchHHHHHHHHHHHHHH
Confidence 99998 55666666554 388999999 77777777788888888753
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=160.24 Aligned_cols=176 Identities=11% Similarity=0.111 Sum_probs=134.1
Q ss_pred ccCCCCCeEEEecccccchhhhccccccCchhhhccc---CceEEEEECCC-------------------CCCCCCCCCC
Q 022316 37 YGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL---HNFCIYHINPP-------------------GHEFGAAAIS 94 (299)
Q Consensus 37 ~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~---~~~~vi~~D~~-------------------G~G~S~~~~~ 94 (299)
.+++..|+||++||++.+... |... ...+. .||+|+++|+| |+|.+..
T Consensus 19 ~~~~~~~~vv~lHG~~~~~~~------~~~~-~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~--- 88 (226)
T 3cn9_A 19 DAPNADACIIWLHGLGADRTD------FKPV-AEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARA--- 88 (226)
T ss_dssp CCTTCCEEEEEECCTTCCGGG------GHHH-HHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTC---
T ss_pred cCCCCCCEEEEEecCCCChHH------HHHH-HHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccccc---
Confidence 344567899999999877644 5343 44444 89999998777 5554321
Q ss_pred CCCCcccHHHHHHHHHHHHHhc---CC--CcEEEEeeCccHHHHHHHHH-HccCcccEEEEecCCCCCcchhHHHHhhhh
Q 022316 95 DDEPVLSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAM-KYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (299)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l---~~--~~~~lvG~S~Gg~va~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (299)
....++++.++++..+++.+ ++ ++++|+|||+||.+++.+|. ++|++++++|++++.......
T Consensus 89 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~--------- 157 (226)
T 3cn9_A 89 --IDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD--------- 157 (226)
T ss_dssp --BCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG---------
T ss_pred --ccchhHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh---------
Confidence 23478899999999999887 65 58999999999999999999 999999999999984321100
Q ss_pred hhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEE
Q 022316 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (299)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 248 (299)
+ .. ...++++|++++
T Consensus 158 ---------------------~--~~------------------------------------------~~~~~~~P~lii 172 (226)
T 3cn9_A 158 ---------------------L--AL------------------------------------------DERHKRIPVLHL 172 (226)
T ss_dssp ---------------------C--CC------------------------------------------CTGGGGCCEEEE
T ss_pred ---------------------h--hh------------------------------------------cccccCCCEEEE
Confidence 0 00 014678999999
Q ss_pred ecCCCcch--hhhHHHhhhcccc--CceEEEEcCchhhhHhHHHHHHHHhhhhcC
Q 022316 249 VGESSPFH--SEAVHMTSKIDRR--YSALVEVWTRVYISLLGFLVLLASFCESEF 299 (299)
Q Consensus 249 ~G~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~f~~~~~~~~~~~~ 299 (299)
+|++|.++ +.++++.+.++.. .+++++++ ++|....+..+.+..|+++.+
T Consensus 173 ~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 173 HGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKRL 226 (226)
T ss_dssp EETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHHHHHC
T ss_pred ecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcchhhHHHHHHHHHhhC
Confidence 99999998 5677777776532 48899999 999999999999999998753
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.1e-24 Score=161.34 Aligned_cols=175 Identities=10% Similarity=0.085 Sum_probs=131.6
Q ss_pred cCCCCCeEEEecccccchhhhccccccCchhhhccc---CceEEEEECCC-------------------CCCCCCCCCCC
Q 022316 38 GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL---HNFCIYHINPP-------------------GHEFGAAAISD 95 (299)
Q Consensus 38 g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~---~~~~vi~~D~~-------------------G~G~S~~~~~~ 95 (299)
+.+..|+||++||++.+... |... ...+. .||+|+++|+| |+|.+.
T Consensus 10 ~~~~~~~vv~~HG~~~~~~~------~~~~-~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~----- 77 (218)
T 1auo_A 10 AKPADACVIWLHGLGADRYD------FMPV-AEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR----- 77 (218)
T ss_dssp SSCCSEEEEEECCTTCCTTT------THHH-HHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC-----
T ss_pred CCCCCcEEEEEecCCCChhh------HHHH-HHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccc-----
Confidence 33567899999999877644 4333 44444 79999998776 444331
Q ss_pred CCCcccHHHHHHHHHHHHHhc---CC--CcEEEEeeCccHHHHHHHHH-HccCcccEEEEecCCCCCcchhHHHHhhhhh
Q 022316 96 DEPVLSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAM-KYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (299)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l---~~--~~~~lvG~S~Gg~va~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (299)
.....++++.++++..+++.+ ++ ++++++|||+||.+++.+|. ++|++++++|++++......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~----------- 146 (218)
T 1auo_A 78 SISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG----------- 146 (218)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC-----------
T ss_pred ccchHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCch-----------
Confidence 123467888899999998887 54 48999999999999999999 99999999999998653200
Q ss_pred hhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEe
Q 022316 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 249 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 249 (299)
+... . ....+++|+++++
T Consensus 147 --------------------~~~~--------------------------------------~----~~~~~~~P~l~i~ 164 (218)
T 1auo_A 147 --------------------DELE--------------------------------------L----SASQQRIPALCLH 164 (218)
T ss_dssp --------------------TTCC--------------------------------------C----CHHHHTCCEEEEE
T ss_pred --------------------hhhh--------------------------------------h----hhcccCCCEEEEE
Confidence 0000 0 0135688999999
Q ss_pred cCCCcch--hhhHHHhhhccc--cCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 250 GESSPFH--SEAVHMTSKIDR--RYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 250 G~~D~~~--~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
|++|.++ +.++.+.+.++. ..+++++++ ++|....+..+.+..|+++.
T Consensus 165 G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~ 216 (218)
T 1auo_A 165 GQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAAR 216 (218)
T ss_dssp ETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHH
T ss_pred eCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHHH
Confidence 9999997 567777777653 248899999 99999999999999988764
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=163.34 Aligned_cols=105 Identities=17% Similarity=0.166 Sum_probs=85.6
Q ss_pred CCCCeEEEeccc--ccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc-
Q 022316 40 QDKPALVTYPDL--ALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (299)
Q Consensus 40 ~~~p~lvl~HG~--~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l- 116 (299)
+++|+|||+||+ +.+.. .| ..+...+..+|+|+++|+||||.|.. ...+++++++++.++++.+
T Consensus 79 ~~~~~lv~lhG~~~~~~~~------~~-~~~~~~L~~~~~v~~~d~~G~G~~~~------~~~~~~~~~~~~~~~l~~~~ 145 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQ------VY-SRLAEELDAGRRVSALVPPGFHGGQA------LPATLTVLVRSLADVVQAEV 145 (319)
T ss_dssp CSSCEEEEECCSSTTCSGG------GG-HHHHHHHCTTSEEEEEECTTSSTTCC------EESSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCcCCCHH------HH-HHHHHHhCCCceEEEeeCCCCCCCCC------CCCCHHHHHHHHHHHHHHhc
Confidence 478899999996 33332 25 44466678899999999999997643 1368999999999888776
Q ss_pred CCCcEEEEeeCccHHHHHHHHHHc---cCcccEEEEecCCCCCc
Q 022316 117 GLGAVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKAP 157 (299)
Q Consensus 117 ~~~~~~lvG~S~Gg~va~~~a~~~---p~~v~~lvl~~~~~~~~ 157 (299)
+.++++|+||||||.+|+.+|.++ |++|+++|++++.....
T Consensus 146 ~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~ 189 (319)
T 3lcr_A 146 ADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDG 189 (319)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCS
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCc
Confidence 558999999999999999999988 88899999999876554
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.6e-24 Score=156.09 Aligned_cols=166 Identities=11% Similarity=0.002 Sum_probs=120.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC-CC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LG 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~ 119 (299)
++|+||++||++.+..... +......+...||.|+++|+||+|.|.... ...++.+.++++.+.++... .+
T Consensus 3 ~~~~vv~~HG~~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 74 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALK----VTALAEVAERLGWTHERPDFTDLDARRDLG----QLGDVRGRLQRLLEIARAATEKG 74 (176)
T ss_dssp SSCEEEEECCTTCCTTSHH----HHHHHHHHHHTTCEEECCCCHHHHTCGGGC----TTCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCcEEEEEeCCCCCccHHH----HHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHhcCCCC
Confidence 5688999999987653210 112223333469999999999999986322 23567788888777777654 57
Q ss_pred cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCC
Q 022316 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQ 199 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (299)
+++++||||||.+++.+|.++| ++++|+++|.......
T Consensus 75 ~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~---------------------------------------- 112 (176)
T 2qjw_A 75 PVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL---------------------------------------- 112 (176)
T ss_dssp CEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB----------------------------------------
T ss_pred CEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc----------------------------------------
Confidence 9999999999999999999998 9999999986543110
Q ss_pred CCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEc
Q 022316 200 VPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVW 277 (299)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~ 277 (299)
.. +.++++|+++++|++|.++ +...++.+.+ +++++++
T Consensus 113 --~~----------------------------------~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~- 152 (176)
T 2qjw_A 113 --PA----------------------------------LDAAAVPISIVHAWHDELIPAADVIAWAQAR---SARLLLV- 152 (176)
T ss_dssp --CC----------------------------------CCCCSSCEEEEEETTCSSSCHHHHHHHHHHH---TCEEEEE-
T ss_pred --Cc----------------------------------ccccCCCEEEEEcCCCCccCHHHHHHHHHhC---CceEEEe-
Confidence 00 3567899999999999998 5666676666 3778888
Q ss_pred CchhhhH---hHHHHHHHHhhh
Q 022316 278 TRVYISL---LGFLVLLASFCE 296 (299)
Q Consensus 278 ~~~H~~~---~~f~~~~~~~~~ 296 (299)
+++|... .++.+.+..|++
T Consensus 153 ~~~H~~~~~~~~~~~~i~~fl~ 174 (176)
T 2qjw_A 153 DDGHRLGAHVQAASRAFAELLQ 174 (176)
T ss_dssp SSCTTCTTCHHHHHHHHHHHHH
T ss_pred CCCccccccHHHHHHHHHHHHH
Confidence 8999864 224444555554
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=162.53 Aligned_cols=235 Identities=15% Similarity=0.094 Sum_probs=137.1
Q ss_pred CcceeecCCceEEEEeccCC---CCCeEEEecccc---cchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYGDQ---DKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~---~~p~lvl~HG~~---~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~ 93 (299)
++..+..+++.+.++.+.+. +.|+||++||++ ++... |...+..+... ||.|+++|+||+|++..+
T Consensus 49 ~~~~i~~~~g~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~~------~~~~~~~la~~~g~~v~~~d~rg~g~~~~~- 121 (311)
T 2c7b_A 49 RDVHIPVSGGSIRARVYFPKKAAGLPAVLYYHGGGFVFGSIET------HDHICRRLSRLSDSVVVSVDYRLAPEYKFP- 121 (311)
T ss_dssp EEEEEEETTEEEEEEEEESSSCSSEEEEEEECCSTTTSCCTGG------GHHHHHHHHHHHTCEEEEECCCCTTTSCTT-
T ss_pred EEEEecCCCCcEEEEEEecCCCCCCcEEEEECCCcccCCChhh------hHHHHHHHHHhcCCEEEEecCCCCCCCCCC-
Confidence 34556667778877766432 347899999987 33322 43333333333 999999999999987432
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccC----cccEEEEecCCCCCcchhHHHHhhh
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLYNKV 167 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (299)
....+..+..+.+.+.++.+++ ++++|+|||+||.+|+.+|.++|+ +++++|+++|...............
T Consensus 122 ---~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~ 198 (311)
T 2c7b_A 122 ---TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEF 198 (311)
T ss_dssp ---HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHHH
T ss_pred ---ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCccH
Confidence 1123344445555555566666 689999999999999999998886 4999999998776321100000000
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEE
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 247 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~li 247 (299)
.. +..... .......+...+........ .. ........+..+. |+++
T Consensus 199 -~~-------------------~~~~~~------~~~~~~~~~~~~~~~~~~~~-----~~-~~~p~~~~l~~~~-P~li 245 (311)
T 2c7b_A 199 -GV-------------------AETTSL------PIELMVWFGRQYLKRPEEAY-----DF-KASPLLADLGGLP-PALV 245 (311)
T ss_dssp -HH-------------------CTTCSS------CHHHHHHHHHHHCSSTTGGG-----ST-TTCGGGSCCTTCC-CEEE
T ss_pred -HH-------------------hccCCC------CHHHHHHHHHHhCCCCcccc-----Cc-ccCcccccccCCC-cceE
Confidence 00 000000 11111111111111000000 00 0011122344455 9999
Q ss_pred EecCCCcchhhhHHHhhhc--cccCceEEEEcCchhhhH---------hHHHHHHHHhhhhc
Q 022316 248 FVGESSPFHSEAVHMTSKI--DRRYSALVEVWTRVYISL---------LGFLVLLASFCESE 298 (299)
Q Consensus 248 i~G~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~~H~~~---------~~f~~~~~~~~~~~ 298 (299)
++|++|.+++....+.+++ .+..++++++++++|... .++.+.+..|+++.
T Consensus 246 i~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (311)
T 2c7b_A 246 VTAEYDPLRDEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSG 307 (311)
T ss_dssp EEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHH
Confidence 9999999985444443333 234588999999999765 46778888888754
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=155.96 Aligned_cols=201 Identities=8% Similarity=-0.034 Sum_probs=135.3
Q ss_pred cceeecCCceEEEEeccCC----CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC--
Q 022316 22 DNLIKTSHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-- 95 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-- 95 (299)
...++.++..+.+..+.+. ..|+||++||++.+... |......+...||.|+++|+||+|.+......
T Consensus 8 ~~~~~~~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~~------~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~ 81 (241)
T 3f67_A 8 ETSIPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVHEH------IRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIP 81 (241)
T ss_dssp EEEEEETTEEEEEEEEEETTCCSCEEEEEEECCTTCSCHH------HHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHH
T ss_pred eEEEecCCcceEEEEecCCCCCCCCCEEEEEcCcCccCHH------HHHHHHHHHHCCcEEEEecccccCCCCCchhhHH
Confidence 3445557778876665432 24789999998776532 43333444467999999999999876432210
Q ss_pred -----CCCcccHHHHHHHHHHHHHhcC-----CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHh
Q 022316 96 -----DEPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN 165 (299)
Q Consensus 96 -----~~~~~~~~~~~~~l~~~l~~l~-----~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 165 (299)
.....+.++..+|+.++++.+. .++++++||||||.+++.++.++|+ +.+++++.+......
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~------- 153 (241)
T 3f67_A 82 TLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEK------- 153 (241)
T ss_dssp HHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCC-------
T ss_pred HHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCC-------
Confidence 0012344567788877777653 3589999999999999999999987 777777554321110
Q ss_pred hhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccE
Q 022316 166 KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 245 (299)
.. ....+....+.++++|+
T Consensus 154 ---------------------------~~----------------------------------~~~~~~~~~~~~~~~P~ 172 (241)
T 3f67_A 154 ---------------------------SL----------------------------------NSPKHPVDIAVDLNAPV 172 (241)
T ss_dssp ---------------------------CS----------------------------------SSCCCHHHHGGGCCSCE
T ss_pred ---------------------------cc----------------------------------CCccCHHHhhhhcCCCE
Confidence 00 00012233456788999
Q ss_pred EEEecCCCcch--hhhHHHhhhcc--ccCceEEEEcCchhhhH------------hHHHHHHHHhhhh
Q 022316 246 LIFVGESSPFH--SEAVHMTSKID--RRYSALVEVWTRVYISL------------LGFLVLLASFCES 297 (299)
Q Consensus 246 lii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~~------------~~f~~~~~~~~~~ 297 (299)
++++|++|.++ +....+.+.+. +..++++++|+++|... .+..+.+.+|+++
T Consensus 173 l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 173 LGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp EEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 99999999997 56667766663 24589999999999764 3466677777764
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-21 Score=161.32 Aligned_cols=261 Identities=10% Similarity=0.003 Sum_probs=141.6
Q ss_pred eeecC-CceEEEEec---c--CCCCCeEEEecccccchhhhccccccCc-hhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 24 LIKTS-HGSLSVTIY---G--DQDKPALVTYPDLALNYMSCFQGLFFCP-EACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 24 ~i~~~-~~~l~~~~~---g--~~~~p~lvl~HG~~~~~~~~~~~~~w~~-~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
.+... +..+.+..+ + .++.|+||++||++.+... |.. ....+...||.|+++|+||+|.|.....
T Consensus 72 ~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~------~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~-- 143 (367)
T 2hdw_A 72 TFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQ------SSGLYAQTMAERGFVTLAFDPSYTGESGGQPR-- 143 (367)
T ss_dssp EEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTS------HHHHHHHHHHHTTCEEEEECCTTSTTSCCSSS--
T ss_pred EEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchh------hHHHHHHHHHHCCCEEEEECCCCcCCCCCcCc--
Confidence 34444 446766554 2 1345789999999876543 322 2334445699999999999998864221
Q ss_pred CCcccHHHHHHHHHHHHHhc------CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH-HHH---hh
Q 022316 97 EPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-WLY---NK 166 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~---~~ 166 (299)
...+....++|+.++++.+ +.++++++|||+||.+++.+|.++| +|+++|+++|......... +.. ..
T Consensus 144 -~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~ 221 (367)
T 2hdw_A 144 -NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLE 221 (367)
T ss_dssp -SCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHH
T ss_pred -cccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchH
Confidence 2233556666666666554 2468999999999999999999998 6999999986421100000 000 00
Q ss_pred hhhhhHHhhcchhHHHHHHHHhhhccc-cccCCCCCchHHHHHHHHhhhcc---ccc-------chHHHHHhhcCCCChh
Q 022316 167 VMSNLLYYYGMCGVVKELLLKRYFSKE-VRGNAQVPESDIVQACRRLLDER---QSS-------NVWHFLEAINGRPDIS 235 (299)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~ 235 (299)
.....+.... .... .......+... ...................+... .+. ........+.. .+..
T Consensus 222 ~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 298 (367)
T 2hdw_A 222 QRTRTLEQLG-QQRW-KDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMN-MPIL 298 (367)
T ss_dssp HHHHHHHHHH-HHHH-HHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTT-SCSC
T ss_pred HHHHHHHHHH-HHHH-HHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcC-CChh
Confidence 0000000000 0000 00000000000 00000000122222222222110 000 00011111111 3344
Q ss_pred hhhcccc-ccEEEEecCCCcchhhhHHHhhhccccCceEEEEcCchhhhHhH-----HHHHHHHhhhhc
Q 022316 236 EGLRKLQ-CRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVWTRVYISLLG-----FLVLLASFCESE 298 (299)
Q Consensus 236 ~~~~~i~-~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-----f~~~~~~~~~~~ 298 (299)
..+.+++ +|+|+++|++|...+.+.++.+.. ..+++++++|+++|..+.+ +.+.+..|+++.
T Consensus 299 ~~~~~i~~~PvLii~G~~D~~~~~~~~~~~~~-~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~ 366 (367)
T 2hdw_A 299 TYIKEISPRPILLIHGERAHSRYFSETAYAAA-AEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEH 366 (367)
T ss_dssp TTGGGGTTSCEEEEEETTCTTHHHHHHHHHHS-CSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHH
T ss_pred HhHHhhcCCceEEEecCCCCCHHHHHHHHHhC-CCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhh
Confidence 5678898 999999999999446666666653 3458999999999986543 577888888764
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.8e-23 Score=153.90 Aligned_cols=170 Identities=19% Similarity=0.150 Sum_probs=125.0
Q ss_pred eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH
Q 022316 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (299)
Q Consensus 31 ~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~ 110 (299)
+++|...| ++|+|||+||++.+... +|...+...+. .++.+|+||++ .++++++++++.
T Consensus 8 ~l~~~~~g--~~~~vv~~HG~~~~~~~-----~~~~~~~~~~~---~~~~v~~~~~~-----------~~~~~~~~~~~~ 66 (191)
T 3bdv_A 8 DLRLTEVS--QQLTMVLVPGLRDSDDE-----HWQSHWERRFP---HWQRIRQREWY-----------QADLDRWVLAIR 66 (191)
T ss_dssp HHHHHHHH--TTCEEEEECCTTCCCTT-----SHHHHHHHHCT---TSEECCCSCCS-----------SCCHHHHHHHHH
T ss_pred ccccCCCC--CCceEEEECCCCCCchh-----hHHHHHHHhcC---CeEEEeccCCC-----------CcCHHHHHHHHH
Confidence 34444444 57899999999876532 24333333344 34677888874 257899999999
Q ss_pred HHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhh
Q 022316 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYF 190 (299)
Q Consensus 111 ~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (299)
++++.++ ++++++||||||.+++.+|.++|++|+++|++++......
T Consensus 67 ~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~-------------------------------- 113 (191)
T 3bdv_A 67 RELSVCT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF-------------------------------- 113 (191)
T ss_dssp HHHHTCS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG--------------------------------
T ss_pred HHHHhcC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc--------------------------------
Confidence 9999988 8999999999999999999999999999999998653210
Q ss_pred ccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccc
Q 022316 191 SKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR 268 (299)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~ 268 (299)
.. .+. ..+.++++|+++++|++|.++ +..+.+.+.+
T Consensus 114 --~~-------~~~-------------------------------~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-- 151 (191)
T 3bdv_A 114 --EI-------DDR-------------------------------IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-- 151 (191)
T ss_dssp --TC-------TTT-------------------------------SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH--
T ss_pred --cC-------ccc-------------------------------cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc--
Confidence 00 000 224678999999999999997 5566666665
Q ss_pred cCceEEEEcCchhhhHh----HHH---HHHHHhhhh
Q 022316 269 RYSALVEVWTRVYISLL----GFL---VLLASFCES 297 (299)
Q Consensus 269 ~~~~~~~~~~~~H~~~~----~f~---~~~~~~~~~ 297 (299)
++++++++++||..+. ++. +.+..|+++
T Consensus 152 -~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 186 (191)
T 3bdv_A 152 -DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEI 186 (191)
T ss_dssp -TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHT
T ss_pred -CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHH
Confidence 3889999999999876 443 555566653
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=161.50 Aligned_cols=207 Identities=14% Similarity=0.065 Sum_probs=130.7
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH-HHHHhcCC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA-EVLNHFGL 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~-~~l~~l~~ 118 (299)
+++|+|||+||++.+... ..| ..+...+..+|+|+++|+||||.|... .++++++++++. .+++.++.
T Consensus 65 ~~~~~lvllhG~~~~~~~----~~~-~~~~~~l~~~~~v~~~d~~G~G~s~~~------~~~~~~~a~~~~~~l~~~~~~ 133 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGP----HEF-TRLAGALRGIAPVRAVPQPGYEEGEPL------PSSMAAVAAVQADAVIRTQGD 133 (300)
T ss_dssp SCSSEEEECCCSSTTCST----TTT-HHHHHHTSSSCCBCCCCCTTSSTTCCB------CSSHHHHHHHHHHHHHHHCSS
T ss_pred CCCCeEEEECCCcccCcH----HHH-HHHHHhcCCCceEEEecCCCCCCCCCC------CCCHHHHHHHHHHHHHHhcCC
Confidence 467899999999876511 115 344566777899999999999997531 378999999988 46678888
Q ss_pred CcEEEEeeCccHHHHHHHHHHcc---CcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccc
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (299)
++++|+||||||.+++.+|.++| ++|+++|++++........ . ... . ......++....
T Consensus 134 ~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~--~-----~~~---------~-~~~~~~~~~~~~- 195 (300)
T 1kez_A 134 KPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA--M-----NAW---------L-EELTATLFDRET- 195 (300)
T ss_dssp CCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHH--H-----HHH---------H-HHHHGGGCCCCS-
T ss_pred CCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhH--H-----HHH---------H-HHHHHHHHhCcC-
Confidence 99999999999999999999998 4899999999876543210 0 000 0 011122222111
Q ss_pred cCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcchhhhHHHhhhccccCceEEE
Q 022316 196 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVE 275 (299)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~ 275 (299)
.. ........+. .+...+.. . ...++++|+++|+|++|.+......+.+.++ ...++++
T Consensus 196 ~~---~~~~~~~~~~------------~~~~~~~~-~----~~~~i~~P~lii~G~d~~~~~~~~~~~~~~~-~~~~~~~ 254 (300)
T 1kez_A 196 VR---MDDTRLTALG------------AYDRLTGQ-W----RPRETGLPTLLVSAGEPMGPWPDDSWKPTWP-FEHDTVA 254 (300)
T ss_dssp SC---CCHHHHHHHH------------HHHHHTTT-C----CCCCCSCCBEEEEESSCSSCCCSSCCSCCCS-SCCEEEE
T ss_pred Cc---cchHHHHHHH------------HHHHHHhc-C----CCCCCCCCEEEEEeCCCCCCCcccchhhhcC-CCCeEEE
Confidence 00 0111111111 11111111 1 2467899999999965444322233333333 2378999
Q ss_pred EcCchhhhHh-H----HHHHHHHhhhh
Q 022316 276 VWTRVYISLL-G----FLVLLASFCES 297 (299)
Q Consensus 276 ~~~~~H~~~~-~----f~~~~~~~~~~ 297 (299)
+++ ||..+. + +.+.+..|+++
T Consensus 255 i~g-gH~~~~~e~~~~~~~~i~~fl~~ 280 (300)
T 1kez_A 255 VPG-DHFTMVQEHADAIARHIDAWLGG 280 (300)
T ss_dssp ESS-CTTTSSSSCSHHHHHHHHHHHTC
T ss_pred ecC-CChhhccccHHHHHHHHHHHHHh
Confidence 999 999875 4 55556666653
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-21 Score=154.55 Aligned_cols=211 Identities=11% Similarity=0.030 Sum_probs=131.7
Q ss_pred EEeccCCCCCeEEEecccccchhhhccccccCchhhhcc-----cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHH
Q 022316 34 VTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-----LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (299)
Q Consensus 34 ~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-----~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 108 (299)
|...+.++.|+|||+||.+........ ..|... ...| ..||+|+++|+|+.+.+. ....++++.+.
T Consensus 33 ~~~~~~~~~p~vv~lHGgg~~~g~~~~-~~~~~~-~~~L~~~a~~~g~~vi~~d~r~~~~~~-------~~~~~~d~~~~ 103 (273)
T 1vkh_A 33 FQEISQNTREAVIYIHGGAWNDPENTP-NDFNQL-ANTIKSMDTESTVCQYSIEYRLSPEIT-------NPRNLYDAVSN 103 (273)
T ss_dssp EECCCTTCCEEEEEECCSTTTCTTCCG-GGGHHH-HHHHHHHCTTCCEEEEEECCCCTTTSC-------TTHHHHHHHHH
T ss_pred CCCCCCCCCeEEEEECCCcccCCcCCh-HHHHHH-HHHHhhhhccCCcEEEEeecccCCCCC-------CCcHHHHHHHH
Confidence 333344567899999996633211111 224333 4444 679999999999886542 12578888888
Q ss_pred HHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc-----------------cCcccEEEEecCCCCCcchhHHHHhhhhhhh
Q 022316 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-----------------RHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (299)
Q Consensus 109 l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-----------------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (299)
+..+++.++.++++|+||||||.+|+.+|.++ |++|+++|++++..........
T Consensus 104 ~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~--------- 174 (273)
T 1vkh_A 104 ITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIE--------- 174 (273)
T ss_dssp HHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHH---------
T ss_pred HHHHHHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhh---------
Confidence 88898988889999999999999999999986 8899999999876532211100
Q ss_pred HHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecC
Q 022316 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 251 (299)
.... .......+....... . ........ ........+++|+++++|+
T Consensus 175 --~~~~-----~~~~~~~~~~~~~~~-----~---------------~~~~~~~~------~~~~~~~~~~~P~lii~G~ 221 (273)
T 1vkh_A 175 --YPEY-----DCFTRLAFPDGIQMY-----E---------------EEPSRVMP------YVKKALSRFSIDMHLVHSY 221 (273)
T ss_dssp --CGGG-----HHHHHHHCTTCGGGC-----C---------------CCHHHHHH------HHHHHHHHHTCEEEEEEET
T ss_pred --cccH-----HHHHHHHhcccccch-----h---------------hcccccCh------hhhhcccccCCCEEEEecC
Confidence 0000 001111111000000 0 00000000 0111233478999999999
Q ss_pred CCcch--hhhHHHhhhccc--cCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 252 SSPFH--SEAVHMTSKIDR--RYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
+|.++ +.++.+.+.++. ..++++++++++|..+.+- +.+...+.
T Consensus 222 ~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~ 269 (273)
T 1vkh_A 222 SDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIF 269 (273)
T ss_dssp TCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHH
T ss_pred CcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHH
Confidence 99997 667777777643 3478999999999988665 44444333
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-22 Score=160.87 Aligned_cols=230 Identities=10% Similarity=0.048 Sum_probs=142.1
Q ss_pred ceeec-CCceEEEEeccC---CCCCeEEEecccccc-hhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC--
Q 022316 23 NLIKT-SHGSLSVTIYGD---QDKPALVTYPDLALN-YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-- 95 (299)
Q Consensus 23 ~~i~~-~~~~l~~~~~g~---~~~p~lvl~HG~~~~-~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-- 95 (299)
..+.. ++.++.+..+.+ ++.|+||++||++.+ ... | .....++..||.|+++|+||+|.|......
T Consensus 59 ~~~~~~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~~------~-~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~ 131 (318)
T 1l7a_A 59 LTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGE------I-HEMVNWALHGYATFGMLVRGQQRSEDTSISPH 131 (318)
T ss_dssp EEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGG------H-HHHHHHHHTTCEEEEECCTTTSSSCCCCCCSS
T ss_pred EEEEccCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCCC------c-ccccchhhCCcEEEEecCCCCCCCCCcccccC
Confidence 34444 333677665533 345789999999877 432 4 233456677999999999999988643110
Q ss_pred ------------CCCcccHHHHHHHHHHHHHhcC----C--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 96 ------------DEPVLSVDDLADQIAEVLNHFG----L--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 96 ------------~~~~~~~~~~~~~l~~~l~~l~----~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
....+++....+|+.++++.+. + ++++++|||+||.+++.+|.++|+ ++++|+++|.....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~ 210 (318)
T 1l7a_A 132 GHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNF 210 (318)
T ss_dssp CCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCH
T ss_pred CccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCH
Confidence 0112334566666666655442 2 689999999999999999999886 88888877754321
Q ss_pred chhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhh
Q 022316 158 SWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEG 237 (299)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
....... ....... . ...+... . .+....... ..... .+....
T Consensus 211 --~~~~~~~------~~~~~~~-~-~~~~~~~-~----------~~~~~~~~~---------------~~~~~-~~~~~~ 253 (318)
T 1l7a_A 211 --ERAIDVA------LEQPYLE-I-NSFFRRN-G----------SPETEVQAM---------------KTLSY-FDIMNL 253 (318)
T ss_dssp --HHHHHHC------CSTTTTH-H-HHHHHHS-C----------CHHHHHHHH---------------HHHHT-TCHHHH
T ss_pred --HHHHhcC------CcCccHH-H-HHHHhcc-C----------CcccHHHHH---------------Hhhcc-ccHHHH
Confidence 1100000 0000000 0 0000000 0 011111100 01111 234455
Q ss_pred hccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 238 LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 238 ~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+.++++|+++++|++|.++ +....+.+.+... ++++++++++|....++.+.+..|+++.
T Consensus 254 ~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~-~~~~~~~~~~H~~~~~~~~~~~~fl~~~ 315 (318)
T 1l7a_A 254 ADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETK-KELKVYRYFGHEYIPAFQTEKLAFFKQI 315 (318)
T ss_dssp GGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSS-EEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred HhhCCCCEEEEeccCCCCCCcccHHHHHhhcCCC-eeEEEccCCCCCCcchhHHHHHHHHHHH
Confidence 6788999999999999998 6677788877653 8899999999997778888888888764
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.7e-22 Score=160.53 Aligned_cols=228 Identities=8% Similarity=-0.045 Sum_probs=140.6
Q ss_pred ceeec-CCceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC--CC
Q 022316 23 NLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI--SD 95 (299)
Q Consensus 23 ~~i~~-~~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~ 95 (299)
..+.. ++.+|.+..+.+ ++.|+||++||++.+.. . | .....++..||.|+++|+||+|.|.... ..
T Consensus 71 ~~~~~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~-----~-~-~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~ 143 (337)
T 1vlq_A 71 VTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG-----F-P-HDWLFWPSMGYICFVMDTRGQGSGWLKGDTPD 143 (337)
T ss_dssp EEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCC-----C-G-GGGCHHHHTTCEEEEECCTTCCCSSSCCCCCB
T ss_pred EEEEcCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCC-----C-c-hhhcchhhCCCEEEEecCCCCCCcccCCCCcc
Confidence 34444 344777666543 24578999999876641 1 2 2334555689999999999999664310 00
Q ss_pred -------------------CCCcccHHHHHHHHHHHHHhc------CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEe
Q 022316 96 -------------------DEPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILV 150 (299)
Q Consensus 96 -------------------~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~ 150 (299)
....+++....+|+.++++.+ +.++++++|||+||.+++.+|.++| +|+++|++
T Consensus 144 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~ 222 (337)
T 1vlq_A 144 YPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCD 222 (337)
T ss_dssp CCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEE
T ss_pred cccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEEC
Confidence 001234556677777766655 2358999999999999999999998 59999998
Q ss_pred cCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcC
Q 022316 151 SPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING 230 (299)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (299)
+|...... ... ......... ....++... + .........+..
T Consensus 223 ~p~~~~~~--~~~---------~~~~~~~~~---~~~~~~~~~---------~---------------~~~~~~~~~~~~ 264 (337)
T 1vlq_A 223 VPFLCHFR--RAV---------QLVDTHPYA---EITNFLKTH---------R---------------DKEEIVFRTLSY 264 (337)
T ss_dssp SCCSCCHH--HHH---------HHCCCTTHH---HHHHHHHHC---------T---------------TCHHHHHHHHHT
T ss_pred CCcccCHH--HHH---------hcCCCcchH---HHHHHHHhC---------c---------------hhHHHHHHhhhh
Confidence 88543211 100 000000000 001111100 0 000011111111
Q ss_pred CCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhh-hHhHHHHHHHHhhhhc
Q 022316 231 RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYI-SLLGFLVLLASFCESE 298 (299)
Q Consensus 231 ~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~f~~~~~~~~~~~ 298 (299)
.+....+.++++|+|+++|++|.++ +....+.+.+.. .++++++|+++|. ...++.+.+..|+++.
T Consensus 265 -~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~-~~~~~~~~~~gH~~~~~~~~~~~~~fl~~~ 333 (337)
T 1vlq_A 265 -FDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGGGSFQAVEQVKFLKKL 333 (337)
T ss_dssp -TCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTTHHHHHHHHHHHHHHH
T ss_pred -ccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCC-CcEEEEcCCCCCCCcchhhHHHHHHHHHHH
Confidence 3444556788999999999999998 677777888864 3889999999998 4556677777777653
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=158.72 Aligned_cols=198 Identities=11% Similarity=0.112 Sum_probs=129.9
Q ss_pred eeec-CCceEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 24 LIKT-SHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 24 ~i~~-~~~~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
.+.. ++..+.+..+.+ +++|+|||+||.+....+ . ..|...+..+...||+|+++|+||+|. .
T Consensus 42 ~i~~~~~~~~~~~~~~p~~~~~p~vv~~HGgg~~~~~--~-~~~~~~~~~l~~~G~~v~~~d~~~~~~-----------~ 107 (262)
T 2pbl_A 42 NLSYGEGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFD--K-SSWSHLAVGALSKGWAVAMPSYELCPE-----------V 107 (262)
T ss_dssp EEESSSSTTCEEEEECCSSSCSEEEEEECCSTTTSCC--G-GGCGGGGHHHHHTTEEEEEECCCCTTT-----------S
T ss_pred ccccCCCCCceEEEEccCCCCCCEEEEEcCcccccCC--h-HHHHHHHHHHHhCCCEEEEeCCCCCCC-----------C
Confidence 3444 333455555533 457899999996521101 1 125344344445699999999999853 3
Q ss_pred cHHHHHHHHHHHHHhcCC---CcEEEEeeCccHHHHHHHHHHc------cCcccEEEEecCCCCCcchhHHHHhhhhhhh
Q 022316 101 SVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~---~~~~lvG~S~Gg~va~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (299)
++.++++|+.++++.+.. ++++|+||||||.+++.+|.++ |++|+++|+++|..........
T Consensus 108 ~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~--------- 178 (262)
T 2pbl_A 108 RISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT--------- 178 (262)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS---------
T ss_pred ChHHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhh---------
Confidence 577778888777776654 6999999999999999999888 8999999999987654321100
Q ss_pred HHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecC
Q 022316 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 251 (299)
.. ...+.. ..+.. .. ......+.++++|+++++|+
T Consensus 179 --------~~-----~~~~~~---------~~~~~---~~--------------------~~~~~~~~~~~~P~lii~G~ 213 (262)
T 2pbl_A 179 --------SM-----NEKFKM---------DADAA---IA--------------------ESPVEMQNRYDAKVTVWVGG 213 (262)
T ss_dssp --------TT-----HHHHCC---------CHHHH---HH--------------------TCGGGCCCCCSCEEEEEEET
T ss_pred --------hh-----hhhhCC---------CHHHH---Hh--------------------cCcccccCCCCCCEEEEEeC
Confidence 00 000000 01100 00 11122346789999999999
Q ss_pred CCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHH
Q 022316 252 SSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLA 292 (299)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~ 292 (299)
+|.++ +.+..+.+.++ ++++++++++|..+.+-+...+
T Consensus 214 ~D~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~~~~~~~~ 253 (262)
T 2pbl_A 214 AERPAFLDQAIWLVEAWD---ADHVIAFEKHHFNVIEPLADPE 253 (262)
T ss_dssp TSCHHHHHHHHHHHHHHT---CEEEEETTCCTTTTTGGGGCTT
T ss_pred CCCcccHHHHHHHHHHhC---CeEEEeCCCCcchHHhhcCCCC
Confidence 99986 67777877775 8899999999999887554433
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.8e-22 Score=160.08 Aligned_cols=172 Identities=12% Similarity=0.070 Sum_probs=123.8
Q ss_pred eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH
Q 022316 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (299)
Q Consensus 31 ~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~ 110 (299)
.+++...+ ++.|+||++||++.+... |......+...||.|+++|+||+|.|.. ...+++.+.+.
T Consensus 86 ~~~~p~~~-~~~p~vv~~HG~~~~~~~------~~~~~~~la~~G~~vv~~d~~g~g~s~~--------~~~~d~~~~~~ 150 (306)
T 3vis_A 86 TIYYPREN-NTYGAIAISPGYTGTQSS------IAWLGERIASHGFVVIAIDTNTTLDQPD--------SRARQLNAALD 150 (306)
T ss_dssp EEEEESSC-SCEEEEEEECCTTCCHHH------HHHHHHHHHTTTEEEEEECCSSTTCCHH--------HHHHHHHHHHH
T ss_pred EEEeeCCC-CCCCEEEEeCCCcCCHHH------HHHHHHHHHhCCCEEEEecCCCCCCCcc--------hHHHHHHHHHH
Confidence 44444333 356789999999887644 4344444555699999999999998832 22233333333
Q ss_pred HHHH--------hcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHH
Q 022316 111 EVLN--------HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (299)
Q Consensus 111 ~~l~--------~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
.+.+ .++.++++++|||+||.+++.+|.++|+ ++++|++++...
T Consensus 151 ~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~--------------------------- 202 (306)
T 3vis_A 151 YMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL--------------------------- 202 (306)
T ss_dssp HHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS---------------------------
T ss_pred HHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC---------------------------
Confidence 3333 2445789999999999999999999997 999999887332
Q ss_pred HHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--h-hh
Q 022316 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S-EA 259 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~-~~ 259 (299)
...+.++++|+++++|++|.++ + ..
T Consensus 203 ----------------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~ 230 (306)
T 3vis_A 203 ----------------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHS 230 (306)
T ss_dssp ----------------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTH
T ss_pred ----------------------------------------------------ccccccCCCCEEEEecCCCcccCcchhH
Confidence 0123467899999999999998 4 47
Q ss_pred HHHhhhcccc-CceEEEEcCchhhhHhH----HHHHHHHhhhh
Q 022316 260 VHMTSKIDRR-YSALVEVWTRVYISLLG----FLVLLASFCES 297 (299)
Q Consensus 260 ~~~~~~~~~~-~~~~~~~~~~~H~~~~~----f~~~~~~~~~~ 297 (299)
+.+.+.++.. ..+++++++++|....+ +.+.+..|+++
T Consensus 231 ~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~ 273 (306)
T 3vis_A 231 KPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYSVAWLKR 273 (306)
T ss_dssp HHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCceEEEECCCCccchhhchhHHHHHHHHHHHH
Confidence 7888887642 57899999999988765 66666677654
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-22 Score=162.44 Aligned_cols=245 Identities=12% Similarity=0.031 Sum_probs=137.7
Q ss_pred ceeecCCc-eEEEEeccC---C-CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC
Q 022316 23 NLIKTSHG-SLSVTIYGD---Q-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 23 ~~i~~~~~-~l~~~~~g~---~-~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
..+...++ .|.+..+.+ . +.|+||++||.+....+.... .|......+...||.|+++|+||+|.|....+
T Consensus 85 ~~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~-~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~--- 160 (361)
T 1jkm_A 85 ETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNR-VHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHP--- 160 (361)
T ss_dssp EEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSH-HHHHHHHHHHHTTCEEEEEECCCSEETTEECC---
T ss_pred eeeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCccc-chhHHHHHHHhCCCEEEEEecCCCCCCCCCCC---
Confidence 34555555 676655432 2 347999999987322111100 13223333334799999999999975542221
Q ss_pred CcccHHHHH---HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH-----ccCcccEEEEecCCCCCcch-hHHHHhhhh
Q 022316 98 PVLSVDDLA---DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-----YRHRVLGLILVSPLCKAPSW-TEWLYNKVM 168 (299)
Q Consensus 98 ~~~~~~~~~---~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~-----~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~ 168 (299)
....+.|.. +.+.+.++.++.++++|+|||+||.+++.++.. +|++|+++|++++....... ........
T Consensus 161 ~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~~~- 239 (361)
T 1jkm_A 161 FPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTE- 239 (361)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHH-
T ss_pred CCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccccccccccccccc-
Confidence 123445553 344444455677899999999999999999998 88899999999987654211 00000000
Q ss_pred hhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEE
Q 022316 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (299)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 248 (299)
.... ... ..... .......+...+............... ......+.+++ |+|++
T Consensus 240 --------~~~~------~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~l~~l~-P~Lii 294 (361)
T 1jkm_A 240 --------LPSL------VEN-DGYFI------ENGGMALLVRAYDPTGEHAEDPIAWPY---FASEDELRGLP-PFVVA 294 (361)
T ss_dssp --------CTHH------HHT-TTSSS------CHHHHHHHHHHHSSSSTTTTCTTTCGG---GCCHHHHTTCC-CEEEE
T ss_pred --------Ccch------hhc-cCccc------CHHHHHHHHHHhCCCCCCCCCcccCcc---ccChhhHcCCC-ceEEE
Confidence 0000 000 00000 122222222211111000000000000 01234456676 99999
Q ss_pred ecCCCcchhhhHHHhhhcc--ccCceEEEEcCchhhhH-----------hHHHHHHHHhhhh
Q 022316 249 VGESSPFHSEAVHMTSKID--RRYSALVEVWTRVYISL-----------LGFLVLLASFCES 297 (299)
Q Consensus 249 ~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~-----------~~f~~~~~~~~~~ 297 (299)
+|++|.++..+..+.+.+. +..++++++++++|... .++.+.+..|+++
T Consensus 295 ~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~ 356 (361)
T 1jkm_A 295 VNELDPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAAD 356 (361)
T ss_dssp EETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHH
T ss_pred EcCcCcchhhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHH
Confidence 9999999866666666653 23478999999999877 5667777888765
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=7.5e-22 Score=149.57 Aligned_cols=170 Identities=9% Similarity=0.023 Sum_probs=121.1
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEEC-------------CCCCCCCCCCCCCCCCcccHHHHH
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN-------------PPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D-------------~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
++.| ||++||++.+... | ..+.+.+..++.|+++| ++|+|.+..... ....+.+.+
T Consensus 15 ~~~p-vv~lHG~g~~~~~------~-~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~---~~~~~~~~~ 83 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDEHQ------L-VEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENF---DLESLDEET 83 (209)
T ss_dssp TSCC-EEEECCTTCCTTT------T-HHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGB---CHHHHHHHH
T ss_pred CCCC-EEEEeCCCCCHHH------H-HHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCC---CHHHHHHHH
Confidence 3567 9999999887644 5 33356666899999999 777776532111 123344444
Q ss_pred HHHHHHH----HhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhH
Q 022316 107 DQIAEVL----NHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (299)
Q Consensus 107 ~~l~~~l----~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (299)
+++.+++ +..++ ++++|+||||||.+++.+|.++|++++++|++++......
T Consensus 84 ~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------------- 141 (209)
T 3og9_A 84 DWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF---------------------- 141 (209)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC----------------------
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc----------------------
Confidence 4444444 44566 7899999999999999999999999999999987442100
Q ss_pred HHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hh
Q 022316 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 258 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~ 258 (299)
. .....+++|+++++|++|.++ +.
T Consensus 142 ----------------------~--------------------------------~~~~~~~~p~li~~G~~D~~v~~~~ 167 (209)
T 3og9_A 142 ----------------------E--------------------------------QTVQLDDKHVFLSYAPNDMIVPQKN 167 (209)
T ss_dssp ----------------------C--------------------------------CCCCCTTCEEEEEECTTCSSSCHHH
T ss_pred ----------------------c--------------------------------ccccccCCCEEEEcCCCCCccCHHH
Confidence 0 001235689999999999998 56
Q ss_pred hHHHhhhccc--cCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 259 AVHMTSKIDR--RYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 259 ~~~~~~~~~~--~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
++++.+.+.. ..+++++++ .+|....+-++.+..|+++
T Consensus 168 ~~~~~~~l~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~l~~ 207 (209)
T 3og9_A 168 FGDLKGDLEDSGCQLEIYESS-LGHQLTQEEVLAAKKWLTE 207 (209)
T ss_dssp HHHHHHHHHHTTCEEEEEECS-STTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCceEEEEcC-CCCcCCHHHHHHHHHHHHh
Confidence 6666666642 236677777 7999888888888888875
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.4e-22 Score=151.90 Aligned_cols=186 Identities=10% Similarity=0.001 Sum_probs=130.1
Q ss_pred CCceEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCC---CCCCC--CCCCCcc
Q 022316 28 SHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF---GAAAI--SDDEPVL 100 (299)
Q Consensus 28 ~~~~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~---S~~~~--~~~~~~~ 100 (299)
++..++|....+ +.+|+||++||++.+... | ..+...+.++|.|+++|.|++.. +-... .......
T Consensus 14 ~~~~l~~~~~~~~~~~~p~vv~lHG~g~~~~~------~-~~~~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~ 86 (223)
T 3b5e_A 14 TDLAFPYRLLGAGKESRECLFLLHGSGVDETT------L-VPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQK 86 (223)
T ss_dssp CSSSSCEEEESTTSSCCCEEEEECCTTBCTTT------T-HHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHH
T ss_pred cCCCceEEEeCCCCCCCCEEEEEecCCCCHHH------H-HHHHHhcCCCceEEEeCCCCCcCCccccccccCCCcccHH
Confidence 344666766654 346899999999887644 4 33355566799999999887421 10000 0001123
Q ss_pred cHHHHHHHHHHHHHhc----CC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHh
Q 022316 101 SVDDLADQIAEVLNHF----GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l----~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
++.+.++++.++++.+ ++ ++++|+||||||.+++.+|.++|++++++|++++.....
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----------------- 149 (223)
T 3b5e_A 87 SILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD----------------- 149 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS-----------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc-----------------
Confidence 4556666666666544 44 789999999999999999999999999999999854320
Q ss_pred hcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCc
Q 022316 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 254 (299)
.. .....+++|+++++|++|.
T Consensus 150 ---------------------------~~--------------------------------~~~~~~~~P~li~~G~~D~ 170 (223)
T 3b5e_A 150 ---------------------------HV--------------------------------PATDLAGIRTLIIAGAADE 170 (223)
T ss_dssp ---------------------------SC--------------------------------CCCCCTTCEEEEEEETTCT
T ss_pred ---------------------------cc--------------------------------ccccccCCCEEEEeCCCCC
Confidence 00 0012357899999999999
Q ss_pred ch--hhhHHHhhhccc--cCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 255 FH--SEAVHMTSKIDR--RYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 255 ~~--~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
++ +.++ +.+.+.. ..+++++++ ++|....+.++.+..|+++.
T Consensus 171 ~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~~ 216 (223)
T 3b5e_A 171 TYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDPDAAIVRQWLAGP 216 (223)
T ss_dssp TTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHHHHHHHHHHHHCC
T ss_pred cCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHHHHHHHHHHHHhh
Confidence 97 5555 6666642 247899999 99999888888888888764
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-22 Score=159.27 Aligned_cols=231 Identities=17% Similarity=0.156 Sum_probs=136.4
Q ss_pred CcceeecCCceEEEEecc-CCCCCeEEEecccc---cchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYG-DQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISD 95 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g-~~~~p~lvl~HG~~---~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~ 95 (299)
++..+...++.+.++.+. .++.|+||++||++ ++... |......+. ..||.|+++|+||+|+|..+
T Consensus 57 ~~~~i~~~~g~i~~~~y~~~~~~p~vv~~HGgg~~~g~~~~------~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p--- 127 (311)
T 1jji_A 57 EDRTIKGRNGDIRVRVYQQKPDSPVLVYYHGGGFVICSIES------HDALCRRIARLSNSTVVSVDYRLAPEHKFP--- 127 (311)
T ss_dssp EEEEEEETTEEEEEEEEESSSSEEEEEEECCSTTTSCCTGG------GHHHHHHHHHHHTSEEEEEECCCTTTSCTT---
T ss_pred EEEEecCCCCcEEEEEEcCCCCceEEEEECCcccccCChhH------hHHHHHHHHHHhCCEEEEecCCCCCCCCCC---
Confidence 345566666777666552 23457899999987 33322 323323333 35999999999999988532
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCC--cEEEEeeCccHHHHHHHHHHccCc----ccEEEEecCCCCCcchhHHHHhhhhh
Q 022316 96 DEPVLSVDDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMS 169 (299)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~--~~~lvG~S~Gg~va~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (299)
....+..+.++++.+.++.++++ +++|+|||+||.+|+.+|.++|++ ++++|+++|............ .. .
T Consensus 128 -~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~-~~-~ 204 (311)
T 1jji_A 128 -AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLL-EF-G 204 (311)
T ss_dssp -HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHH-HT-S
T ss_pred -CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccHH-Hh-c
Confidence 11234555556666666666765 899999999999999999998876 999999998775432111000 00 0
Q ss_pred hhHHhhc-chhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEE
Q 022316 170 NLLYYYG-MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (299)
Q Consensus 170 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 248 (299)
.... .. ......+...+........ .... ......+..+ .|++++
T Consensus 205 ---~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~----~~~~--~p~~~~l~~~-~P~li~ 250 (311)
T 1jji_A 205 ---EGLWILD------------------------QKIMSWFSEQYFSREEDKF----NPLA--SVIFADLENL-PPALII 250 (311)
T ss_dssp ---SSCSSCC------------------------HHHHHHHHHHHCSSGGGGG----CTTT--SGGGSCCTTC-CCEEEE
T ss_pred ---CCCccCC------------------------HHHHHHHHHHhCCCCccCC----Cccc--CcccccccCC-ChheEE
Confidence 0000 00 1111111111110000000 0000 0111223333 499999
Q ss_pred ecCCCcchhhhHHHhhhcc--ccCceEEEEcCchhhhH---------hHHHHHHHHhhhh
Q 022316 249 VGESSPFHSEAVHMTSKID--RRYSALVEVWTRVYISL---------LGFLVLLASFCES 297 (299)
Q Consensus 249 ~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~---------~~f~~~~~~~~~~ 297 (299)
+|++|.+++....+.+++. +..++++++++++|... .++.+.+..|+++
T Consensus 251 ~G~~D~l~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 251 TAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred EcCcCcchHHHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 9999999855555555442 23488999999999654 3567777788765
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-21 Score=154.86 Aligned_cols=227 Identities=11% Similarity=0.003 Sum_probs=133.4
Q ss_pred cCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcccHHHH
Q 022316 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (299)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (299)
..+..+.+...+.++.|+||++||.+..... ... |...+..+.. .||+|+++|+||.+... ....++++
T Consensus 81 ~~~~~~~~~~p~~~~~p~vv~lHGgg~~~~~--~~~-~~~~~~~la~~~g~~vi~~D~r~~~~~~-------~~~~~~d~ 150 (326)
T 3d7r_A 81 LDDMQVFRFNFRHQIDKKILYIHGGFNALQP--SPF-HWRLLDKITLSTLYEVVLPIYPKTPEFH-------IDDTFQAI 150 (326)
T ss_dssp ETTEEEEEEESTTCCSSEEEEECCSTTTSCC--CHH-HHHHHHHHHHHHCSEEEEECCCCTTTSC-------HHHHHHHH
T ss_pred ECCEEEEEEeeCCCCCeEEEEECCCcccCCC--CHH-HHHHHHHHHHHhCCEEEEEeCCCCCCCC-------chHHHHHH
Confidence 3444555444332457899999996532111 112 3244334432 38999999999975431 13567888
Q ss_pred HHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCc----ccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHH
Q 022316 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVV 181 (299)
Q Consensus 106 ~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (299)
++.+..+++.++.++++|+||||||.+|+.+|.++|++ ++++|+++|............ . .........
T Consensus 151 ~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~-~---~~~~~~~~~--- 223 (326)
T 3d7r_A 151 QRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDIS-D---ALIEQDAVL--- 223 (326)
T ss_dssp HHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCC-H---HHHHHCSSC---
T ss_pred HHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHH-h---hhcccCccc---
Confidence 88888888888889999999999999999999999887 999999998765421110000 0 000000000
Q ss_pred HHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcchhhhHH
Q 022316 182 KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVH 261 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~ 261 (299)
.......+...+....... .... ......+..+ +|+|+++|++|..++....
T Consensus 224 --------------------~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~-~P~lii~G~~D~~~~~~~~ 275 (326)
T 3d7r_A 224 --------------------SQFGVNEIMKKWANGLPLT-DKRI------SPINGTIEGL-PPVYMFGGGREMTHPDMKL 275 (326)
T ss_dssp --------------------CHHHHHHHHHHHHTTSCTT-STTT------SGGGSCCTTC-CCEEEEEETTSTTHHHHHH
T ss_pred --------------------CHHHHHHHHHHhcCCCCCC-CCeE------CcccCCcccC-CCEEEEEeCcccchHHHHH
Confidence 0111111111110000000 0000 0011112222 5999999999987755555
Q ss_pred Hhhhcc--ccCceEEEEcCchhhhHh-------HHHHHHHHhhhhc
Q 022316 262 MTSKID--RRYSALVEVWTRVYISLL-------GFLVLLASFCESE 298 (299)
Q Consensus 262 ~~~~~~--~~~~~~~~~~~~~H~~~~-------~f~~~~~~~~~~~ 298 (299)
+.+.+. +.+++++++|+++|.... ++.+.+..|+++.
T Consensus 276 ~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~ 321 (326)
T 3d7r_A 276 FEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDED 321 (326)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHH
Confidence 555442 234789999999997765 5777788888753
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=155.01 Aligned_cols=194 Identities=9% Similarity=0.035 Sum_probs=119.2
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh---c
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---F 116 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~---l 116 (299)
++.|+||++||.+..... ... |...+..+...||.|+++|+||+|.+.. ......++..+.+..+.+. +
T Consensus 33 ~~~p~vv~~HGgg~~~~~--~~~-~~~~~~~l~~~G~~v~~~d~~g~g~~~~-----~~~~~~~d~~~~~~~l~~~~~~~ 104 (277)
T 3bxp_A 33 VDYPIMIICPGGGFTYHS--GRE-EAPIATRMMAAGMHTVVLNYQLIVGDQS-----VYPWALQQLGATIDWITTQASAH 104 (277)
T ss_dssp CCEEEEEEECCSTTTSCC--CTT-HHHHHHHHHHTTCEEEEEECCCSTTTCC-----CTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccEEEEECCCccccCC--Ccc-chHHHHHHHHCCCEEEEEecccCCCCCc-----cCchHHHHHHHHHHHHHhhhhhc
Confidence 356789999994422211 111 3334344445799999999999984421 1123445555444444433 2
Q ss_pred CC--CcEEEEeeCccHHHHHHHHHHc--------------cCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhH
Q 022316 117 GL--GAVMCMGVTAGAYILTLFAMKY--------------RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (299)
Q Consensus 117 ~~--~~~~lvG~S~Gg~va~~~a~~~--------------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (299)
++ ++++|+||||||.+|+.+|.++ |.+++++|+++|........ ....
T Consensus 105 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~---------------~~~~- 168 (277)
T 3bxp_A 105 HVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGF---------------PTTS- 168 (277)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSS---------------SSSH-
T ss_pred CCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCC---------------CCcc-
Confidence 33 5899999999999999999985 77899999999865422100 0000
Q ss_pred HHHHHHH-hhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--h
Q 022316 181 VKELLLK-RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 257 (299)
Q Consensus 181 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~ 257 (299)
... .++. . ....+....+.++.+|+|+++|++|.++ +
T Consensus 169 ----~~~~~~~~-----------------------------------~-~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~ 208 (277)
T 3bxp_A 169 ----AARNQITT-----------------------------------D-ARLWAAQRLVTPASKPAFVWQTATDESVPPI 208 (277)
T ss_dssp ----HHHHHHCS-----------------------------------C-GGGSBGGGGCCTTSCCEEEEECTTCCCSCTH
T ss_pred ----ccchhccc-----------------------------------h-hhhcCHhhccccCCCCEEEEeeCCCCccChH
Confidence 000 1110 0 0001223335567889999999999998 5
Q ss_pred hhHHHhhhccc--cCceEEEEcCchhhh-------------------HhHHHHHHHHhhhh
Q 022316 258 EAVHMTSKIDR--RYSALVEVWTRVYIS-------------------LLGFLVLLASFCES 297 (299)
Q Consensus 258 ~~~~~~~~~~~--~~~~~~~~~~~~H~~-------------------~~~f~~~~~~~~~~ 297 (299)
.+..+.+.+.. ..++++++++++|.. ..+|++.+..|+++
T Consensus 209 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 269 (277)
T 3bxp_A 209 NSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQE 269 (277)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHh
Confidence 67777776642 346899999999932 35577778888765
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-20 Score=152.39 Aligned_cols=229 Identities=15% Similarity=0.081 Sum_probs=134.6
Q ss_pred cceeecCCceEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhhcccC--ceEEEEECCCCCCCCCCCCCCC
Q 022316 22 DNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
...+...++.+.++.+.+ ++.|+||++||.|....+ . ..|... ...+.+ ||.|+++|+||+|++.. +
T Consensus 67 ~~~i~~~~~~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~--~-~~~~~~-~~~La~~~g~~Vv~~Dyrg~~~~~~--p-- 138 (323)
T 3ain_A 67 DITIPGSETNIKARVYYPKTQGPYGVLVYYHGGGFVLGD--I-ESYDPL-CRAITNSCQCVTISVDYRLAPENKF--P-- 138 (323)
T ss_dssp EEEEECSSSEEEEEEEECSSCSCCCEEEEECCSTTTSCC--T-TTTHHH-HHHHHHHHTSEEEEECCCCTTTSCT--T--
T ss_pred EEEecCCCCeEEEEEEecCCCCCCcEEEEECCCccccCC--h-HHHHHH-HHHHHHhcCCEEEEecCCCCCCCCC--c--
Confidence 344555666777666543 356899999996522111 1 114333 444443 99999999999998732 1
Q ss_pred CCcccHHHHHHHHHHHHHhc----CCCcEEEEeeCccHHHHHHHHHHccCcc---cEEEEecCCCCCcchhHHHHhhhhh
Q 022316 97 EPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRV---LGLILVSPLCKAPSWTEWLYNKVMS 169 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~va~~~a~~~p~~v---~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (299)
..++|..+.+..+.+.. +.++++|+|||+||.+|+.+|.++|+++ +++|+++|............
T Consensus 139 ---~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~----- 210 (323)
T 3ain_A 139 ---AAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSLY----- 210 (323)
T ss_dssp ---HHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHHH-----
T ss_pred ---chHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccHH-----
Confidence 34555555555555443 4678999999999999999999999877 89999998765432111000
Q ss_pred hhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEe
Q 022316 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 249 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 249 (299)
.......+ .......+...+........ .... ......+..+. |+++++
T Consensus 211 ~~~~~~~l------------------------~~~~~~~~~~~~~~~~~~~~----~~~~--sp~~~~l~~l~-P~lii~ 259 (323)
T 3ain_A 211 DNGEGFFL------------------------TREHIDWFGQQYLRSFADLL----DFRF--SPILADLNDLP-PALIIT 259 (323)
T ss_dssp HHSSSSSS------------------------CHHHHHHHHHHHCSSGGGGG----CTTT--CGGGSCCTTCC-CEEEEE
T ss_pred HhccCCCC------------------------CHHHHHHHHHHhCCCCcccC----Cccc--CcccCcccCCC-HHHEEE
Confidence 00000000 01111111111110000000 0000 01111233343 999999
Q ss_pred cCCCcchhhhHHHhhhcc--ccCceEEEEcCchhhhHh---------HHHHHHHHhhhh
Q 022316 250 GESSPFHSEAVHMTSKID--RRYSALVEVWTRVYISLL---------GFLVLLASFCES 297 (299)
Q Consensus 250 G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~---------~f~~~~~~~~~~ 297 (299)
|++|.+++....+.+++. +..++++++++++|.... ++.+.+..|+++
T Consensus 260 G~~D~l~~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 318 (323)
T 3ain_A 260 AEHDPLRDQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRK 318 (323)
T ss_dssp ETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHH
Confidence 999999866666666653 234789999999998664 577777788765
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-21 Score=148.18 Aligned_cols=181 Identities=10% Similarity=0.054 Sum_probs=127.2
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhc-----ccCceEEEEECCCCCCCCCC--------------CCCCCCCcc
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSL-----LLHNFCIYHINPPGHEFGAA--------------AISDDEPVL 100 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~-----l~~~~~vi~~D~~G~G~S~~--------------~~~~~~~~~ 100 (299)
+..|+|||+||++.+... |......+ ...+++|+++|.|+++.+.. .........
T Consensus 21 ~~~p~vv~lHG~g~~~~~------~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 94 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQG------LRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLE 94 (239)
T ss_dssp CCCEEEEEECCTTCCHHH------HHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHH
T ss_pred CCCcEEEEEecCCCchhh------HHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchh
Confidence 456899999999988755 32222222 22479999988875421100 000112235
Q ss_pred cHHHHHHHHHHHHHh-----cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhh
Q 022316 101 SVDDLADQIAEVLNH-----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~-----l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (299)
+++++++++..+++. ++.++++|+||||||.+++.+|.++|++++++|++++.........
T Consensus 95 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~-------------- 160 (239)
T 3u0v_A 95 SIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVY-------------- 160 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHH--------------
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHH--------------
Confidence 788889999998877 3568999999999999999999999999999999998654321100
Q ss_pred cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccccc-EEEEecCCCc
Q 022316 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR-SLIFVGESSP 254 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~G~~D~ 254 (299)
. . +. ....++| +++++|++|.
T Consensus 161 -------~--------------------~----~~---------------------------~~~~~~pp~li~~G~~D~ 182 (239)
T 3u0v_A 161 -------Q--------------------A----LQ---------------------------KSNGVLPELFQCHGTADE 182 (239)
T ss_dssp -------H--------------------H----HH---------------------------HCCSCCCCEEEEEETTCS
T ss_pred -------H--------------------H----HH---------------------------hhccCCCCEEEEeeCCCC
Confidence 0 0 00 1123456 9999999999
Q ss_pred ch--hhhHHHhhhcc--ccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 255 FH--SEAVHMTSKID--RRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 255 ~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
++ +.++.+.+.+. +.+++++++++++|....+.++.+..|+++.
T Consensus 183 ~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 230 (239)
T 3u0v_A 183 LVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTK 230 (239)
T ss_dssp SSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHHHHh
Confidence 97 55666666664 2358899999999998888888888888764
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-20 Score=150.93 Aligned_cols=230 Identities=13% Similarity=0.043 Sum_probs=138.7
Q ss_pred CcceeecCCceEEEEeccCCCCCe-EEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDKPA-LVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~-lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
+...+..++..+ |...+....|+ ||++||.+....+ ... |...+..++.. ||.|+++|+|+++++. .
T Consensus 59 ~~~~~~~~g~~~-~~p~~~~~~~~~vv~~HGgg~~~g~--~~~-~~~~~~~la~~~g~~v~~~dyr~~~~~~--~----- 127 (322)
T 3k6k_A 59 ELTLTDLGGVPC-IRQATDGAGAAHILYFHGGGYISGS--PST-HLVLTTQLAKQSSATLWSLDYRLAPENP--F----- 127 (322)
T ss_dssp EEEEEEETTEEE-EEEECTTCCSCEEEEECCSTTTSCC--HHH-HHHHHHHHHHHHTCEEEEECCCCTTTSC--T-----
T ss_pred eEEEEEECCEeE-EecCCCCCCCeEEEEEcCCcccCCC--hHH-HHHHHHHHHHhcCCEEEEeeCCCCCCCC--C-----
Confidence 334555666677 66666556677 9999996621111 011 32333444444 9999999999987652 1
Q ss_pred cccHHHHHHHHHHHHHh-cCCCcEEEEeeCccHHHHHHHHHHccCc----ccEEEEecCCCCCcchhHHHHhhhhhhhHH
Q 022316 99 VLSVDDLADQIAEVLNH-FGLGAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~-l~~~~~~lvG~S~Gg~va~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (299)
...++|..+.+..+++. ++.++++|+|||+||.+|+.+|.++|++ ++++|+++|................ .
T Consensus 128 ~~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~----~ 203 (322)
T 3k6k_A 128 PAAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLAD----R 203 (322)
T ss_dssp THHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHTGG----G
T ss_pred chHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhccC----C
Confidence 25677777777777776 5668999999999999999999998876 9999999997765322111100000 0
Q ss_pred hhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhc-ccccchHHHHHhhcCCCChhhhhccccccEEEEecCC
Q 022316 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (299)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 252 (299)
.... .......+...+.. ...... .. ......+ +...|+|+++|++
T Consensus 204 ~~~~------------------------~~~~~~~~~~~~~~~~~~~~~------~~--sp~~~~~-~~~pP~li~~G~~ 250 (322)
T 3k6k_A 204 DFLA------------------------EPDTLGEMSELYVGGEDRKNP------LI--SPVYADL-SGLPEMLIHVGSE 250 (322)
T ss_dssp CSSS------------------------CHHHHHHHHHHHHTTSCTTCT------TT--CGGGSCC-TTCCCEEEEEESS
T ss_pred CCcC------------------------CHHHHHHHHHHhcCCCCCCCC------cC--Ccccccc-cCCCcEEEEECCc
Confidence 0000 01111111111110 000000 00 0011111 2235999999999
Q ss_pred CcchhhhHHHhhhcc--ccCceEEEEcCchhhhH---------hHHHHHHHHhhhhc
Q 022316 253 SPFHSEAVHMTSKID--RRYSALVEVWTRVYISL---------LGFLVLLASFCESE 298 (299)
Q Consensus 253 D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~---------~~f~~~~~~~~~~~ 298 (299)
|.+++.+..+.+++. +..++++++|+++|... .++++.+..|+++.
T Consensus 251 D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (322)
T 3k6k_A 251 EALLSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISAR 307 (322)
T ss_dssp CTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHH
Confidence 999866666666653 23479999999999754 36778888888764
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=155.09 Aligned_cols=194 Identities=11% Similarity=0.085 Sum_probs=120.6
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHH---HHhcC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV---LNHFG 117 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~---l~~l~ 117 (299)
+.|+||++||.+..+.. . ..|...+..+...||.|+++|+||+|.+... ......+..+.+..+ .+.++
T Consensus 49 ~~p~vv~lHGgg~~~~~--~-~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~ 120 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIP--V-AQAESLAMAFAGHGYQAFYLEYTLLTDQQPL-----GLAPVLDLGRAVNLLRQHAAEWH 120 (283)
T ss_dssp CEEEEEEECCSTTTCCC--H-HHHHHHHHHHHTTTCEEEEEECCCTTTCSSC-----BTHHHHHHHHHHHHHHHSHHHHT
T ss_pred CCcEEEEECCCccccCC--c-cccHHHHHHHHhCCcEEEEEeccCCCccccC-----chhHHHHHHHHHHHHHHHHHHhC
Confidence 45789999996522111 0 1143343444456999999999999876211 012333333333333 33334
Q ss_pred C--CcEEEEeeCccHHHHHHHHHHccCc-------------ccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHH
Q 022316 118 L--GAVMCMGVTAGAYILTLFAMKYRHR-------------VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (299)
Q Consensus 118 ~--~~~~lvG~S~Gg~va~~~a~~~p~~-------------v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
+ ++++|+||||||.+|+.+|.++|++ ++++|+++|......... ..
T Consensus 121 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~-----------------~~-- 181 (283)
T 3bjr_A 121 IDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFP-----------------KD-- 181 (283)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC----------------------
T ss_pred CCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccccc-----------------cc--
Confidence 4 4899999999999999999999987 899999988654221100 00
Q ss_pred HHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhH
Q 022316 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 260 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~ 260 (299)
......++. .. ...+....+.++++|+|+++|++|.++ +.+.
T Consensus 182 ~~~~~~~~~-----------------------------------~~-~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~ 225 (283)
T 3bjr_A 182 DATLATWTP-----------------------------------TP-NELAADQHVNSDNQPTFIWTTADDPIVPATNTL 225 (283)
T ss_dssp -----CCCC-----------------------------------CG-GGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHH
T ss_pred cchHHHHHH-----------------------------------Hh-HhcCHHHhccCCCCCEEEEEcCCCCCCChHHHH
Confidence 000000000 00 001223345678899999999999997 5677
Q ss_pred HHhhhccc--cCceEEEEcCchhhhH-----------------hHHHHHHHHhhhh
Q 022316 261 HMTSKIDR--RYSALVEVWTRVYISL-----------------LGFLVLLASFCES 297 (299)
Q Consensus 261 ~~~~~~~~--~~~~~~~~~~~~H~~~-----------------~~f~~~~~~~~~~ 297 (299)
.+.+.+.. ..++++++++++|... .+|.+.+..|+++
T Consensus 226 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 281 (283)
T 3bjr_A 226 AYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLAD 281 (283)
T ss_dssp HHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhh
Confidence 77777643 2468999999999544 3567777777764
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=146.65 Aligned_cols=185 Identities=11% Similarity=0.029 Sum_probs=113.0
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcE
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 121 (299)
.|+|||+||+.++..+..... . .........+|+|+++|+||||+ +..+++..+++....+++
T Consensus 2 mptIl~lHGf~ss~~s~k~~~-l-~~~~~~~~~~~~v~~pdl~~~g~---------------~~~~~l~~~~~~~~~~~i 64 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATT-F-KSWLQQHHPHIEMQIPQLPPYPA---------------EAAEMLESIVMDKAGQSI 64 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHH-H-HHHHHHHCTTSEEECCCCCSSHH---------------HHHHHHHHHHHHHTTSCE
T ss_pred CcEEEEeCCCCCCCCccHHHH-H-HHHHHHcCCCcEEEEeCCCCCHH---------------HHHHHHHHHHHhcCCCcE
Confidence 489999999977654311111 0 11112223479999999999974 345677778888888999
Q ss_pred EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCC
Q 022316 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 201 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (299)
+|+||||||.+|+.+|.++|..+..++...++. ... .. ...... ..........
T Consensus 65 ~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~------~~~-----~~---~~~~~~-------~~~~~~~~~~----- 118 (202)
T 4fle_A 65 GIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPF------ELL-----SD---YLGENQ-------NPYTGQKYVL----- 118 (202)
T ss_dssp EEEEETHHHHHHHHHHHHTTCCEEEESCCSSHH------HHG-----GG---GCEEEE-------CTTTCCEEEE-----
T ss_pred EEEEEChhhHHHHHHHHHhcccchheeeccchH------HHH-----HH---hhhhhc-------cccccccccc-----
Confidence 999999999999999999998776655443311 000 00 000000 0000000000
Q ss_pred chHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCc
Q 022316 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTR 279 (299)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~ 279 (299)
....... . ........++++|+|+|+|++|.+| +.+.++. + ++++++++++
T Consensus 119 ~~~~~~~-------------------~---~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~---~--~~~l~i~~g~ 171 (202)
T 4fle_A 119 ESRHIYD-------------------L---KAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY---T--PCRQTVESGG 171 (202)
T ss_dssp CHHHHHH-------------------H---HTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT---T--TSEEEEESSC
T ss_pred hHHHHHH-------------------H---HhhhhhhhccCceEEEEEeCCCCCCCHHHHHHHh---h--CCEEEEECCC
Confidence 0111000 0 0111234578999999999999998 4444443 2 3789999999
Q ss_pred hhhhH--hHHHHHHHHhhh
Q 022316 280 VYISL--LGFLVLLASFCE 296 (299)
Q Consensus 280 ~H~~~--~~f~~~~~~~~~ 296 (299)
+|... .++++.+..|++
T Consensus 172 ~H~~~~~~~~~~~I~~FL~ 190 (202)
T 4fle_A 172 NHAFVGFDHYFSPIVTFLG 190 (202)
T ss_dssp CTTCTTGGGGHHHHHHHHT
T ss_pred CcCCCCHHHHHHHHHHHHh
Confidence 99642 468888888886
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=159.88 Aligned_cols=220 Identities=13% Similarity=0.128 Sum_probs=126.2
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh----
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---- 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~---- 115 (299)
+.|+||++||.+....+..... |...+..+. ..||.|+++|+||++.+.. ...++|..+.+..+.+.
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~~-~~~~~~~la~~~g~~vv~~d~rg~~~~~~-------~~~~~d~~~~~~~l~~~~~~~ 153 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAASTI-FHDFCCEMAVHAGVVIASVDYRLAPEHRL-------PAAYDDAMEALQWIKDSRDEW 153 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBHH-HHHHHHHHHHHHTCEEEEEECCCTTTTCT-------THHHHHHHHHHHHHHTCCCHH
T ss_pred CceEEEEEcCCcCcCCCCCchh-HHHHHHHHHHHCCcEEEEecCCCCCCCCC-------chHHHHHHHHHHHHHhCCcch
Confidence 4578999999875433222211 323333443 4699999999999876521 14456666666555543
Q ss_pred ----cCCCcEEEEeeCccHHHHHHHHHHccC--------cccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHH
Q 022316 116 ----FGLGAVMCMGVTAGAYILTLFAMKYRH--------RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183 (299)
Q Consensus 116 ----l~~~~~~lvG~S~Gg~va~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (299)
++.++++|+||||||.+|+.+|.++|+ +|+++|+++|............... ...........
T Consensus 154 ~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 228 (338)
T 2o7r_A 154 LTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLA-----NDSRLPTFVLD 228 (338)
T ss_dssp HHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTT-----TCSSSCHHHHH
T ss_pred hhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccC-----CCcccCHHHHH
Confidence 344789999999999999999999998 8999999998765432211110000 00000000001
Q ss_pred HHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCC--hhhhhccccccEEEEecCCCcchhhhHH
Q 022316 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPD--ISEGLRKLQCRSLIFVGESSPFHSEAVH 261 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~P~lii~G~~D~~~~~~~~ 261 (299)
......+....... .+ ....+..... ..+.+.++++|+|+++|++|.++.....
T Consensus 229 ~~~~~~~~~~~~~~----~~--------------------~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~ 284 (338)
T 2o7r_A 229 LIWELSLPMGADRD----HE--------------------YCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMIDRQME 284 (338)
T ss_dssp HHHHHHSCTTCCTT----ST--------------------TTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHHHHHH
T ss_pred HHHHHhCCCCCCCC----Cc--------------------ccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchHHHHH
Confidence 11111110000000 00 0000000000 1234556778999999999999854444
Q ss_pred Hhhhcc--ccCceEEEEcCchhhhH-------hHHHHHHHHhhhh
Q 022316 262 MTSKID--RRYSALVEVWTRVYISL-------LGFLVLLASFCES 297 (299)
Q Consensus 262 ~~~~~~--~~~~~~~~~~~~~H~~~-------~~f~~~~~~~~~~ 297 (299)
+.+.+. +.+++++++++++|... .++.+.+.+|+++
T Consensus 285 ~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~ 329 (338)
T 2o7r_A 285 LAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVD 329 (338)
T ss_dssp HHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHh
Confidence 444442 23488999999999654 3577778888765
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-21 Score=167.78 Aligned_cols=225 Identities=9% Similarity=-0.025 Sum_probs=144.4
Q ss_pred cceeec-CCceEEEEeccCC----CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCC---CCCCCCCC
Q 022316 22 DNLIKT-SHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG---HEFGAAAI 93 (299)
Q Consensus 22 ~~~i~~-~~~~l~~~~~g~~----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G---~G~S~~~~ 93 (299)
...++. ++.++++..+.+. +.|+||++||.+.+... ..|...+..+...||.|+++|+|| +|.+....
T Consensus 335 ~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~----~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~ 410 (582)
T 3o4h_A 335 LVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDS----DSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLK 410 (582)
T ss_dssp EEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCC----SSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHT
T ss_pred EEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccc----cccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhh
Confidence 344555 4447877776543 45789999998766321 224455455556799999999999 66542111
Q ss_pred -CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 94 -SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 94 -~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
........++|+.+.+..+++....++++|+||||||.+++.+|.++|++++++|++++.........
T Consensus 411 ~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~----------- 479 (582)
T 3o4h_A 411 IIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYE----------- 479 (582)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHH-----------
T ss_pred hhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhh-----------
Confidence 11122355777777777777765556999999999999999999999999999999998543211000
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 252 (299)
. ..... .......++ . ..+.. .. .+....+.++++|+|+++|++
T Consensus 480 -~--~~~~~-~~~~~~~~~-~--------~~~~~---~~--------------------~sp~~~~~~i~~P~lii~G~~ 523 (582)
T 3o4h_A 480 -L--SDAAF-RNFIEQLTG-G--------SREIM---RS--------------------RSPINHVDRIKEPLALIHPQN 523 (582)
T ss_dssp -T--CCHHH-HHHHHHHTT-T--------CHHHH---HH--------------------TCGGGGGGGCCSCEEEEEETT
T ss_pred -c--ccchh-HHHHHHHcC-c--------CHHHH---Hh--------------------cCHHHHHhcCCCCEEEEecCC
Confidence 0 00000 001111111 0 01110 00 122344677899999999999
Q ss_pred Ccch--hhhHHHhhhccc--cCceEEEEcCchhhhH-----hHHHHHHHHhhhh
Q 022316 253 SPFH--SEAVHMTSKIDR--RYSALVEVWTRVYISL-----LGFLVLLASFCES 297 (299)
Q Consensus 253 D~~~--~~~~~~~~~~~~--~~~~~~~~~~~~H~~~-----~~f~~~~~~~~~~ 297 (299)
|..+ +.+.++.+.+.. ..++++++|+++|... .++.+.+..|+++
T Consensus 524 D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 577 (582)
T 3o4h_A 524 ASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLAT 577 (582)
T ss_dssp CSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 9997 677777777643 3478999999999865 2566667777765
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=157.68 Aligned_cols=119 Identities=14% Similarity=0.119 Sum_probs=87.8
Q ss_pred eeecCCceEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 24 LIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
.++++++.+....+.+ +..|+||++||.+.+. |......+...||+|+++|+||+|.+.... ...
T Consensus 137 ~~~~~~~~l~~~l~~P~~~~~~P~Vv~~hG~~~~~--------~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~----~~~ 204 (422)
T 3k2i_A 137 RQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGL--------LEYRASLLAGHGFATLALAYYNFEDLPNNM----DNI 204 (422)
T ss_dssp EEEEEETTEEEEEEECSSSCCBCEEEEECCTTCSC--------CCHHHHHHHTTTCEEEEEECSSSTTSCSSC----SCE
T ss_pred EEEEeCCcEEEEEEcCCCCCCcCEEEEEcCCCcch--------hHHHHHHHHhCCCEEEEEccCCCCCCCCCc----ccC
Confidence 4455556666555433 3568999999987663 323333444579999999999999775322 235
Q ss_pred cHHHHHHHHHHHHHhcC--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 101 SVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
..+++.+.+..+.+..+ .+++.|+||||||.+|+.+|.++|+ |+++|++++...
T Consensus 205 ~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~ 260 (422)
T 3k2i_A 205 SLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGI 260 (422)
T ss_dssp ETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSB
T ss_pred CHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCccc
Confidence 67787777777666644 4799999999999999999999998 999999998763
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=154.41 Aligned_cols=217 Identities=13% Similarity=0.064 Sum_probs=127.9
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh----
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---- 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~---- 115 (299)
+.|+||++||.+....+..... |...+..+. ..||.|+++|+||.+++.. ...++|..+.+..+.+.
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~~~-~~~~~~~la~~~g~~vv~~d~rg~~~~~~-------~~~~~D~~~~~~~l~~~~~~~ 183 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANSAI-YDTLCRRLVGLCKCVVVSVNYRRAPENPY-------PCAYDDGWIALNWVNSRSWLK 183 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTBHH-HHHHHHHHHHHHTSEEEEECCCCTTTSCT-------THHHHHHHHHHHHHHTCGGGC
T ss_pred CceEEEEECCCcCcCCCCcchh-HHHHHHHHHHHcCCEEEEecCCCCCCCCC-------chhHHHHHHHHHHHHhCchhh
Confidence 3578999999765432211111 323333333 3599999999999876521 24567777777666653
Q ss_pred --cCCC-cEEEEeeCccHHHHHHHHHHccC---cccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhh
Q 022316 116 --FGLG-AVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (299)
Q Consensus 116 --l~~~-~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (299)
++.+ +++|+||||||.+|+.+|.++|+ +|+++|+++|............... ......
T Consensus 184 ~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~-----~~~~~~----------- 247 (351)
T 2zsh_A 184 SKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTESEKSLD-----GKYFVT----------- 247 (351)
T ss_dssp CTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHHT-----TTSSCC-----------
T ss_pred cCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCChhhhhcC-----CCcccC-----------
Confidence 3456 99999999999999999999998 8999999998765432211100000 000000
Q ss_pred hccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccc-cEEEEecCCCcchhhhHHHhhhcc-
Q 022316 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-RSLIFVGESSPFHSEAVHMTSKID- 267 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~lii~G~~D~~~~~~~~~~~~~~- 267 (299)
......+...+..............+ ......+.++++ |+|+++|++|.++.....+.+++.
T Consensus 248 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~~~~l~~ 311 (351)
T 2zsh_A 248 -------------VRDRDWYWKAFLPEGEDREHPACNPF---SPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKK 311 (351)
T ss_dssp -------------HHHHHHHHHHHSCTTCCTTSTTTCTT---STTSCCCTTCCCCEEEEEEETTSTTHHHHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHhCCCCCCCCCcccCCC---CCCccchhhCCCCCEEEEEcCCCcchHHHHHHHHHHHH
Confidence 11111111101000000000000000 011234566777 999999999999865555655553
Q ss_pred -ccCceEEEEcCchhhhHh--------HHHHHHHHhhhh
Q 022316 268 -RRYSALVEVWTRVYISLL--------GFLVLLASFCES 297 (299)
Q Consensus 268 -~~~~~~~~~~~~~H~~~~--------~f~~~~~~~~~~ 297 (299)
+.+++++++++++|.... ++.+.+.+|+++
T Consensus 312 ~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 312 AGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp TTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 235899999999996543 467777788764
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=158.53 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=87.5
Q ss_pred eeecCCceEEEEecc---CCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 24 LIKTSHGSLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g---~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
.++++++.+....+- ++..|+||++||.+.+. |......+...||.|+++|+||+|.+.... ...
T Consensus 153 ~~~~~~g~l~~~l~~P~~~~~~P~Vv~lhG~~~~~--------~~~~a~~La~~Gy~Vla~D~rG~~~~~~~~----~~~ 220 (446)
T 3hlk_A 153 REPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGL--------LEYRASLLAGKGFAVMALAYYNYEDLPKTM----ETL 220 (446)
T ss_dssp EEEEEETTEEEEEEECSSSCCBCEEEEECCSSCSC--------CCHHHHHHHTTTCEEEEECCSSSTTSCSCC----SEE
T ss_pred EEEecCCeEEEEEEeCCCCCCCCEEEEECCCCcch--------hhHHHHHHHhCCCEEEEeccCCCCCCCcch----hhC
Confidence 445555556555443 23468999999987653 222233444579999999999999774322 236
Q ss_pred cHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 101 SVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
.++++.+.+..+.+..++ +++.|+||||||.+|+.+|.++|+ |+++|++++...
T Consensus 221 ~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~ 276 (446)
T 3hlk_A 221 HLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVA 276 (446)
T ss_dssp EHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSB
T ss_pred CHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCccc
Confidence 688887777777766554 799999999999999999999998 999999988654
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1e-20 Score=152.99 Aligned_cols=231 Identities=12% Similarity=-0.037 Sum_probs=130.0
Q ss_pred cceeecCCc--eEEEEeccC----CCCCeEEEecccc---cchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCC
Q 022316 22 DNLIKTSHG--SLSVTIYGD----QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 22 ~~~i~~~~~--~l~~~~~g~----~~~p~lvl~HG~~---~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~ 91 (299)
+..+...+| .+.++.+.+ ++.|+||++||++ ++... |...+..+.. .||.|+++|+||+|++..
T Consensus 53 ~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~~------~~~~~~~la~~~G~~Vv~~d~rg~~~~~~ 126 (323)
T 1lzl_A 53 ELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAES------SDPFCVEVARELGFAVANVEYRLAPETTF 126 (323)
T ss_dssp EEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGG------GHHHHHHHHHHHCCEEEEECCCCTTTSCT
T ss_pred EEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChhh------hHHHHHHHHHhcCcEEEEecCCCCCCCCC
Confidence 344555555 576655432 3457899999987 33322 3334344444 399999999999998742
Q ss_pred CCCCCCCcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCc----ccEEEEecCCCCCcchhHHHHh
Q 022316 92 AISDDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYN 165 (299)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~ 165 (299)
+ ....+..+..+.+.+.++.+++ ++++|+|||+||.+++.+|.++|++ ++++|+++|............
T Consensus 127 --~--~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~- 201 (323)
T 1lzl_A 127 --P--GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMT- 201 (323)
T ss_dssp --T--HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHHH-
T ss_pred --C--chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchhHH-
Confidence 1 1112233333333333445555 6899999999999999999988764 999999998765432111000
Q ss_pred hhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccc-----cchHHHHHhhcCCCChh-hhhc
Q 022316 166 KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS-----SNVWHFLEAINGRPDIS-EGLR 239 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~ 239 (299)
.......+. ......+...+..... ....... .... ..+.
T Consensus 202 ----~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------sp~~~~~~~ 247 (323)
T 1lzl_A 202 ----NFVDTPLWH------------------------RPNAILSWKYYLGESYSGPEDPDVSIYA------APSRATDLT 247 (323)
T ss_dssp ----HCSSCSSCC------------------------HHHHHHHHHHHHCTTCCCTTCSCCCTTT------CGGGCSCCT
T ss_pred ----HhccCCCCC------------------------HHHHHHHHHHhCCCCcccccccCCCccc------CcccCcccC
Confidence 000000000 1111111111100000 0000000 0000 0111
Q ss_pred cccccEEEEecCCCcchhhhHHHhhhcc--ccCceEEEEcCchhhhH--------hHHHHHHHHhhhhc
Q 022316 240 KLQCRSLIFVGESSPFHSEAVHMTSKID--RRYSALVEVWTRVYISL--------LGFLVLLASFCESE 298 (299)
Q Consensus 240 ~i~~P~lii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~--------~~f~~~~~~~~~~~ 298 (299)
. .+|+++++|++|.+++....+.+++. +..++++++|+++|... .++.+.+..|+++.
T Consensus 248 ~-~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 315 (323)
T 1lzl_A 248 G-LPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRG 315 (323)
T ss_dssp T-CCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHH
T ss_pred C-CChhheEECCcCCchHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHH
Confidence 1 26999999999999866666666653 23489999999999643 35777777887653
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4e-21 Score=154.50 Aligned_cols=230 Identities=13% Similarity=0.075 Sum_probs=132.1
Q ss_pred CcceeecCCceEEEEeccCC----CCCeEEEecccc---cchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYGDQ----DKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAA 92 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~----~~p~lvl~HG~~---~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~ 92 (299)
+...+...++.+.++.+.+. +.|+||++||.| ++... |...+..+..+ ||.|+++|+||+|.+..
T Consensus 49 ~~~~i~~~~g~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~------~~~~~~~la~~~g~~v~~~d~rg~~~~~~- 121 (310)
T 2hm7_A 49 REFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLET------HDPVCRVLAKDGRAVVFSVDYRLAPEHKF- 121 (310)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTT------THHHHHHHHHHHTSEEEEECCCCTTTSCT-
T ss_pred EEEEeccCCCeEEEEEEecCCCCCCCCEEEEECCCccccCChhH------hHHHHHHHHHhcCCEEEEeCCCCCCCCCC-
Confidence 34456667778877776543 357899999944 33321 43443344444 89999999999987632
Q ss_pred CCCCCCcccHHHHHHHHHHHHHh---cC--CCcEEEEeeCccHHHHHHHHHHccC----cccEEEEecCCCCCc--chhH
Q 022316 93 ISDDEPVLSVDDLADQIAEVLNH---FG--LGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAP--SWTE 161 (299)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~---l~--~~~~~lvG~S~Gg~va~~~a~~~p~----~v~~lvl~~~~~~~~--~~~~ 161 (299)
+ ...+|..+.+..+.+. ++ .++++|+||||||.+|+.+|.++|+ +|+++|+++|..... ....
T Consensus 122 -~-----~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~ 195 (310)
T 2hm7_A 122 -P-----AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPA 195 (310)
T ss_dssp -T-----HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCCH
T ss_pred -C-----ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCCc
Confidence 1 2334443333333332 23 3689999999999999999999887 699999999876543 1100
Q ss_pred HHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccc
Q 022316 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL 241 (299)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 241 (299)
.. ......... .......+...+........ ..... ......+..+
T Consensus 196 ~~-----~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~-p~~~~~l~~~ 241 (310)
T 2hm7_A 196 SI-----EENAEGYLL------------------------TGGMMLWFRDQYLNSLEELT----HPWFS-PVLYPDLSGL 241 (310)
T ss_dssp HH-----HHTSSSSSS------------------------CHHHHHHHHHHHCSSGGGGG----CTTTC-GGGCSCCTTC
T ss_pred ch-----hhcCCCCCC------------------------CHHHHHHHHHHhCCCCCccC----CccCC-CCcCccccCC
Confidence 00 000000000 01111111111111000000 00000 0011123334
Q ss_pred cccEEEEecCCCcchhhhHHHhhhcc--ccCceEEEEcCchhhhH---------hHHHHHHHHhhhhc
Q 022316 242 QCRSLIFVGESSPFHSEAVHMTSKID--RRYSALVEVWTRVYISL---------LGFLVLLASFCESE 298 (299)
Q Consensus 242 ~~P~lii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~---------~~f~~~~~~~~~~~ 298 (299)
. |+++++|++|.+++....+.+++. +..++++++++++|... .++.+.+..|+++.
T Consensus 242 ~-P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 308 (310)
T 2hm7_A 242 P-PAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 308 (310)
T ss_dssp C-CEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred C-CEEEEEecCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHH
Confidence 3 999999999999865666666653 23478999999999543 45777788888653
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.2e-21 Score=151.73 Aligned_cols=205 Identities=13% Similarity=0.097 Sum_probs=130.1
Q ss_pred CCceEEEEeccC------CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 28 SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 28 ~~~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
++..+.+....+ ++.|+||++||.+..... . ..|......+...||.|+++|+||+|.|... .+
T Consensus 23 ~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~--~-~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~-------~~ 92 (276)
T 3hxk_A 23 DTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHIS--Q-RESDPLALAFLAQGYQVLLLNYTVMNKGTNY-------NF 92 (276)
T ss_dssp TTBEEEEECCCC------CCBCEEEEECCSTTTSCC--G-GGSHHHHHHHHHTTCEEEEEECCCTTSCCCS-------CT
T ss_pred CCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCC--c-hhhHHHHHHHHHCCCEEEEecCccCCCcCCC-------Cc
Confidence 455777665543 345899999996532211 1 1132343444567999999999999987421 22
Q ss_pred HHHHHHHHHHHH----Hh-----cCCCcEEEEeeCccHHHHHHHHHH-ccCcccEEEEecCCCCCcchhHHHHhhhhhhh
Q 022316 102 VDDLADQIAEVL----NH-----FGLGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (299)
Q Consensus 102 ~~~~~~~l~~~l----~~-----l~~~~~~lvG~S~Gg~va~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (299)
+....+|+.+++ +. ++.++++|+||||||.+++.+|.+ .+.+++++|+++|..........
T Consensus 93 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~--------- 163 (276)
T 3hxk_A 93 LSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPS--------- 163 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSS---------
T ss_pred CchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCc---------
Confidence 333334433333 32 234689999999999999999988 78899999999986543211000
Q ss_pred HHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecC
Q 022316 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 251 (299)
.... ..++ .... ...+....+.++++|+++++|+
T Consensus 164 --~~~~---------~~~~---------------------------~~~~--------~~~~~~~~~~~~~~P~lii~G~ 197 (276)
T 3hxk_A 164 --DLSH---------FNFE---------------------------IENI--------SEYNISEKVTSSTPPTFIWHTA 197 (276)
T ss_dssp --SSSS---------SCCC---------------------------CSCC--------GGGBTTTTCCTTSCCEEEEEET
T ss_pred --chhh---------hhcC---------------------------chhh--------hhCChhhccccCCCCEEEEecC
Confidence 0000 0000 0000 0012223356788999999999
Q ss_pred CCcch--hhhHHHhhhccc--cCceEEEEcCchhhhH-----------------hHHHHHHHHhhhh
Q 022316 252 SSPFH--SEAVHMTSKIDR--RYSALVEVWTRVYISL-----------------LGFLVLLASFCES 297 (299)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~--~~~~~~~~~~~~H~~~-----------------~~f~~~~~~~~~~ 297 (299)
+|.++ +.+..+.+.+.. ..++++++|+++|... .+|++.+..|+++
T Consensus 198 ~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 264 (276)
T 3hxk_A 198 DDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLER 264 (276)
T ss_dssp TCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHH
T ss_pred CCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHh
Confidence 99998 667777777642 3468999999999533 5678888888765
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-20 Score=164.60 Aligned_cols=228 Identities=11% Similarity=0.036 Sum_probs=145.5
Q ss_pred ceeec-CCceEEEEeccCC----------CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCC---CCC
Q 022316 23 NLIKT-SHGSLSVTIYGDQ----------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG---HEF 88 (299)
Q Consensus 23 ~~i~~-~~~~l~~~~~g~~----------~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G---~G~ 88 (299)
..+.. ++.++++..+.+. +.|+||++||++.+... ..|...+..+...||.|+++|+|| +|+
T Consensus 394 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~----~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~ 469 (662)
T 3azo_A 394 RTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVP----AVLDLDVAYFTSRGIGVADVNYGGSTGYGR 469 (662)
T ss_dssp EEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCC----CSCCHHHHHHHTTTCEEEEEECTTCSSSCH
T ss_pred EEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCc----ccchHHHHHHHhCCCEEEEECCCCCCCccH
Confidence 34555 4457877765432 35789999999866532 124444444556799999999999 775
Q ss_pred CCCCC-CCCCCcccHHHHHHHHHHHHHh--cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHh
Q 022316 89 GAAAI-SDDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN 165 (299)
Q Consensus 89 S~~~~-~~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 165 (299)
+.... .......+++|+.+.+..+++. ++.++++|+||||||.+++.++.+ |++++++|++++...... ...
T Consensus 470 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~---~~~- 544 (662)
T 3azo_A 470 AYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLG---WAD- 544 (662)
T ss_dssp HHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHH---HHT-
T ss_pred HHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHH---Hhc-
Confidence 53211 1112246688999999998888 566799999999999999998875 999999999988643211 000
Q ss_pred hhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccE
Q 022316 166 KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 245 (299)
....... ......+++.. ++..+.+.. .+....+.++++|+
T Consensus 545 ---------~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~--------------------~sp~~~~~~~~~P~ 585 (662)
T 3azo_A 545 ---------GGTHDFE-SRYLDFLIGSF---------EEFPERYRD--------------------RAPLTRADRVRVPF 585 (662)
T ss_dssp ---------TCSCGGG-TTHHHHHTCCT---------TTCHHHHHH--------------------TCGGGGGGGCCSCE
T ss_pred ---------ccccchh-hHhHHHHhCCC---------ccchhHHHh--------------------hChHhHhccCCCCE
Confidence 0000000 00111111110 000011111 12334467889999
Q ss_pred EEEecCCCcch--hhhHHHhhhccc--cCceEEEEcCchhhhH-----hHHHHHHHHhhhhc
Q 022316 246 LIFVGESSPFH--SEAVHMTSKIDR--RYSALVEVWTRVYISL-----LGFLVLLASFCESE 298 (299)
Q Consensus 246 lii~G~~D~~~--~~~~~~~~~~~~--~~~~~~~~~~~~H~~~-----~~f~~~~~~~~~~~ 298 (299)
|+++|++|..+ +.+.++.+.+.. ..++++++|+++|... .++.+.+.+|+++.
T Consensus 586 lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 647 (662)
T 3azo_A 586 LLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQV 647 (662)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 99999999998 677788877753 2468999999999653 45667777777653
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-19 Score=147.07 Aligned_cols=228 Identities=12% Similarity=0.072 Sum_probs=136.3
Q ss_pred CcceeecCCceEEEEeccC--CCCCeEEEecccc---cchhhhccccccCchhhhccc--CceEEEEECCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYGD--QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~--~~~p~lvl~HG~~---~~~~~~~~~~~w~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~ 93 (299)
++..++..+|.+.++.+.+ ...|+||++||.+ ++... |... ...+. .||.|+++|+|+.+....
T Consensus 64 ~~~~~~~~~g~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~~------~~~~-~~~la~~~g~~V~~~dyr~~p~~~~-- 134 (326)
T 3ga7_A 64 RTCAVPTPYGDVTTRLYSPQPTSQATLYYLHGGGFILGNLDT------HDRI-MRLLARYTGCTVIGIDYSLSPQARY-- 134 (326)
T ss_dssp EEEEECCTTSCEEEEEEESSSSCSCEEEEECCSTTTSCCTTT------THHH-HHHHHHHHCSEEEEECCCCTTTSCT--
T ss_pred EEEEeecCCCCeEEEEEeCCCCCCcEEEEECCCCcccCChhh------hHHH-HHHHHHHcCCEEEEeeCCCCCCCCC--
Confidence 4455666777887776654 3458999999987 33322 4233 34444 499999999998765421
Q ss_pred CCCCCcccHHHHHHHHHHHHHh---cCC--CcEEEEeeCccHHHHHHHHHHccCc------ccEEEEecCCCCCcchhHH
Q 022316 94 SDDEPVLSVDDLADQIAEVLNH---FGL--GAVMCMGVTAGAYILTLFAMKYRHR------VLGLILVSPLCKAPSWTEW 162 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~---l~~--~~~~lvG~S~Gg~va~~~a~~~p~~------v~~lvl~~~~~~~~~~~~~ 162 (299)
...++|..+.+..+.+. +++ ++++|+|+|+||.+|+.+|.++|++ +++++++.+..........
T Consensus 135 -----~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~ 209 (326)
T 3ga7_A 135 -----PQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSR 209 (326)
T ss_dssp -----THHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHH
T ss_pred -----CcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhH
Confidence 13455555555555443 243 6899999999999999999988875 8999999886654322111
Q ss_pred HHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccc
Q 022316 163 LYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 242 (299)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 242 (299)
.... . ....+ ..+....+...+........ ..+. ......+.+..
T Consensus 210 ~~~~---~--~~~~l------------------------~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~ 254 (326)
T 3ga7_A 210 RLFG---G--AWDGL------------------------TREDLDMYEKAYLRNDEDRE----SPWY--CLFNNDLTRDV 254 (326)
T ss_dssp HHCC---C--TTTTC------------------------CHHHHHHHHHHHCSSGGGGG----CTTT--SGGGSCCSSCC
T ss_pred hhhc---C--CCCCC------------------------CHHHHHHHHHHhCCCCCccC----Cccc--CCCcchhhcCC
Confidence 0000 0 00000 01111111111111000000 0000 01112344456
Q ss_pred ccEEEEecCCCcchhhhHHHhhhcc--ccCceEEEEcCchhhhH---------hHHHHHHHHhhhh
Q 022316 243 CRSLIFVGESSPFHSEAVHMTSKID--RRYSALVEVWTRVYISL---------LGFLVLLASFCES 297 (299)
Q Consensus 243 ~P~lii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~---------~~f~~~~~~~~~~ 297 (299)
.|+++++|+.|.+++....+.+++. +..++++++|+++|... .++++.+..|+++
T Consensus 255 ~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 320 (326)
T 3ga7_A 255 PPCFIASAEFDPLIDDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMA 320 (326)
T ss_dssp CCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecCcCcCHHHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHH
Confidence 7999999999999976666666653 23579999999999763 4577777788765
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=167.25 Aligned_cols=223 Identities=10% Similarity=0.083 Sum_probs=141.1
Q ss_pred CcceeecCC--ceEEEEeccCC------CCCeEEEecccccchhhhccccccC-----chhhhcccCceEEEEECCCCCC
Q 022316 21 KDNLIKTSH--GSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFC-----PEACSLLLHNFCIYHINPPGHE 87 (299)
Q Consensus 21 ~~~~i~~~~--~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~~w~-----~~~~~~l~~~~~vi~~D~~G~G 87 (299)
+...++..+ .++++..+.+. ..|+||++||.+.+.... .. |. ..+..+...||.|+++|+||+|
T Consensus 488 ~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~--~~-~~~~~~~~~~~~l~~~G~~v~~~d~rG~g 564 (741)
T 2ecf_A 488 EFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVT--DS-WPGRGDHLFNQYLAQQGYVVFSLDNRGTP 564 (741)
T ss_dssp EEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCS--SC-CCCSHHHHHHHHHHHTTCEEEEECCTTCS
T ss_pred EEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCccccc--cc-ccccchhHHHHHHHhCCCEEEEEecCCCC
Confidence 334555544 48888887653 246899999987664210 01 32 1223344679999999999999
Q ss_pred CCCCCCC----CCCCcccHHHHHHHHHHHHHh--cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH
Q 022316 88 FGAAAIS----DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (299)
Q Consensus 88 ~S~~~~~----~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (299)
.|..+.. .......++|+.+.+..+.+. ++.++++++||||||.+++.+|.++|++++++|+++|.........
T Consensus 565 ~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~ 644 (741)
T 2ecf_A 565 RRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDS 644 (741)
T ss_dssp SSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBH
T ss_pred CCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhcc
Confidence 8753211 011123456666666655554 2346899999999999999999999999999999998654221100
Q ss_pred HHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccc
Q 022316 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL 241 (299)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 241 (299)
. ....++... .+..+.+.. .+....+.++
T Consensus 645 ------------------~----~~~~~~~~~---------~~~~~~~~~--------------------~~~~~~~~~i 673 (741)
T 2ecf_A 645 ------------------H----YTERYMDLP---------ARNDAGYRE--------------------ARVLTHIEGL 673 (741)
T ss_dssp ------------------H----HHHHHHCCT---------GGGHHHHHH--------------------HCSGGGGGGC
T ss_pred ------------------c----cchhhcCCc---------ccChhhhhh--------------------cCHHHHHhhC
Confidence 0 001111100 000011110 1223346778
Q ss_pred cccEEEEecCCCcch--hhhHHHhhhccc--cCceEEEEcCchhhhH----hHHHHHHHHhhhh
Q 022316 242 QCRSLIFVGESSPFH--SEAVHMTSKIDR--RYSALVEVWTRVYISL----LGFLVLLASFCES 297 (299)
Q Consensus 242 ~~P~lii~G~~D~~~--~~~~~~~~~~~~--~~~~~~~~~~~~H~~~----~~f~~~~~~~~~~ 297 (299)
++|+|+++|++|..+ +.+.++.+.+.. ..++++++|+++|... .++.+.+..|+++
T Consensus 674 ~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 737 (741)
T 2ecf_A 674 RSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGR 737 (741)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHHHHH
Confidence 999999999999887 667777777643 2368999999999876 3466777777765
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=166.96 Aligned_cols=223 Identities=10% Similarity=0.107 Sum_probs=137.3
Q ss_pred cceeecCCc--eEEEEeccCC------CCCeEEEecccccchhhhccccccCc----hhhhcccCceEEEEECCCCCCCC
Q 022316 22 DNLIKTSHG--SLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCP----EACSLLLHNFCIYHINPPGHEFG 89 (299)
Q Consensus 22 ~~~i~~~~~--~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~~w~~----~~~~~l~~~~~vi~~D~~G~G~S 89 (299)
...+...++ ++++..+.++ +.|+||++||.+.+... ... |.. .+..+...||.|+++|+||+|.+
T Consensus 457 ~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~--~~~-~~~~~~~~~~~la~~G~~v~~~d~rG~g~s 533 (706)
T 2z3z_A 457 TGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLV--TKT-WRSSVGGWDIYMAQKGYAVFTVDSRGSANR 533 (706)
T ss_dssp EEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCC--CSC-C----CCHHHHHHHTTCEEEEECCTTCSSS
T ss_pred EEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceee--ccc-cccCchHHHHHHHhCCcEEEEEecCCCccc
Confidence 344555444 7888877643 23789999996655421 011 322 22333456999999999999987
Q ss_pred CCCCC----CCCCcccHHHHHHHHHHHHHh--cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHH
Q 022316 90 AAAIS----DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163 (299)
Q Consensus 90 ~~~~~----~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 163 (299)
..+.. .......++|+.+.+..+.+. ++.++++|+||||||.+++.+|.++|++++++|+++|.........
T Consensus 534 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-- 611 (706)
T 2z3z_A 534 GAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAI-- 611 (706)
T ss_dssp CHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSBH--
T ss_pred chhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHHh--
Confidence 53211 011112334444444433222 1346899999999999999999999999999999998654211100
Q ss_pred HhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccc
Q 022316 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 243 (299)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 243 (299)
. ....++.... ..++. +.. .+....+.++++
T Consensus 612 ----------------~----~~~~~~~~~~------~~~~~---~~~--------------------~~~~~~~~~i~~ 642 (706)
T 2z3z_A 612 ----------------M----YGERYFDAPQ------ENPEG---YDA--------------------ANLLKRAGDLKG 642 (706)
T ss_dssp ----------------H----HHHHHHCCTT------TCHHH---HHH--------------------HCGGGGGGGCCS
T ss_pred ----------------h----hhhhhcCCcc------cChhh---hhh--------------------CCHhHhHHhCCC
Confidence 0 0011111000 01111 110 123345678899
Q ss_pred cEEEEecCCCcch--hhhHHHhhhcc--ccCceEEEEcCchhhhH----hHHHHHHHHhhhhc
Q 022316 244 RSLIFVGESSPFH--SEAVHMTSKID--RRYSALVEVWTRVYISL----LGFLVLLASFCESE 298 (299)
Q Consensus 244 P~lii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~~----~~f~~~~~~~~~~~ 298 (299)
|+|+++|++|..+ +.++++.+.+. +..++++++|+++|... .++.+.+..|+++.
T Consensus 643 P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 643 RLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTDH 705 (706)
T ss_dssp EEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHHH
T ss_pred CEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 9999999999987 66777777664 23468999999999876 35667777887764
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.7e-20 Score=144.35 Aligned_cols=97 Identities=15% Similarity=0.149 Sum_probs=80.3
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC-
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL- 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~- 118 (299)
+++++|||+||++.+... | ..+...+. ++|+++|+++. . ..++++++++++.++++.+..
T Consensus 22 ~~~~~l~~~hg~~~~~~~------~-~~~~~~L~--~~v~~~d~~~~--~--------~~~~~~~~a~~~~~~i~~~~~~ 82 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTTV------F-HSLASRLS--IPTYGLQCTRA--A--------PLDSIHSLAAYYIDCIRQVQPE 82 (283)
T ss_dssp SSSCCEEEECCTTCCSGG------G-HHHHHHCS--SCEEEECCCTT--S--------CCSCHHHHHHHHHHHHTTTCCS
T ss_pred CCCCeEEEECCCCCCHHH------H-HHHHHhcC--ceEEEEecCCC--C--------CCCCHHHHHHHHHHHHHHhCCC
Confidence 467889999999988744 6 34455565 99999999752 1 237899999999999999865
Q ss_pred CcEEEEeeCccHHHHHHHHHHc---cCccc---EEEEecCCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKY---RHRVL---GLILVSPLCK 155 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~---p~~v~---~lvl~~~~~~ 155 (299)
++++|+||||||.+|+.+|.+. |++|. ++|++++.+.
T Consensus 83 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 83 GPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT 125 (283)
T ss_dssp SCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTT
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCch
Confidence 7999999999999999999876 88899 9999998654
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.5e-20 Score=138.09 Aligned_cols=179 Identities=13% Similarity=0.081 Sum_probs=119.6
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCC--CCCCCCcccHHHHHHHHHHHHH---h
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA--ISDDEPVLSVDDLADQIAEVLN---H 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~~~~~~l~~~l~---~ 115 (299)
.+++|||+||.|.++.. |......+..+++.|+++|.+|++.-+.. .+.......+++..+.+..+++ .
T Consensus 21 a~~~Vv~lHG~G~~~~~------~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAAD------IISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEA 94 (210)
T ss_dssp CSEEEEEECCTTCCHHH------HHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHH------HHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 35689999999988755 32332333346999999999987632111 0111112344555555554443 3
Q ss_pred cCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccc
Q 022316 116 FGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE 193 (299)
Q Consensus 116 l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (299)
.++ ++++|+|+|+||.+++.++.++|++++++|.+++......... ..
T Consensus 95 ~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~------------------------------~~ 144 (210)
T 4h0c_A 95 QGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAI------------------------------GN 144 (210)
T ss_dssp TTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCG------------------------------GG
T ss_pred hCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhh------------------------------hh
Confidence 344 6899999999999999999999999999999886332110000 00
Q ss_pred cccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhcc--cc
Q 022316 194 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKID--RR 269 (299)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~--~~ 269 (299)
. . . ...++|+++++|++|+++ +.++++.+.+. +.
T Consensus 145 ~-----------------------------------~-~------~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~ 182 (210)
T 4h0c_A 145 Y-----------------------------------K-G------DFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNA 182 (210)
T ss_dssp C-----------------------------------C-B------CCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTC
T ss_pred h-----------------------------------h-h------hccCCceEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 0 0 0 012469999999999998 55555555542 23
Q ss_pred CceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 270 YSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 270 ~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
.++++++|+.||.+-.+-++.+.+|+++
T Consensus 183 ~v~~~~ypg~gH~i~~~el~~i~~wL~k 210 (210)
T 4h0c_A 183 AVSQVVYPGRPHTISGDEIQLVNNTILK 210 (210)
T ss_dssp EEEEEEEETCCSSCCHHHHHHHHHTTTC
T ss_pred CeEEEEECCCCCCcCHHHHHHHHHHHcC
Confidence 4789999999999888888999999875
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=143.60 Aligned_cols=109 Identities=13% Similarity=0.206 Sum_probs=81.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccC-c---eEEEEECCCCCCCCC--CCC------C-------CC-CCcc
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-N---FCIYHINPPGHEFGA--AAI------S-------DD-EPVL 100 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~---~~vi~~D~~G~G~S~--~~~------~-------~~-~~~~ 100 (299)
.++||||+||++.+... |... ...|.+ + ++|+.+|.+++|.+. ... | .. ...+
T Consensus 3 ~~~pvv~iHG~~~~~~~------~~~~-~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~ 75 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNR------FDSL-ITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKA 75 (250)
T ss_dssp SCCCEEEECCCGGGHHH------HHHH-HHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHH
T ss_pred CCCCEEEECCCCCCHHH------HHHH-HHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCccc
Confidence 46789999999998865 6444 455543 4 789998888888521 111 1 00 1112
Q ss_pred cHHHHHHHHHHHHHhc----CCCcEEEEeeCccHHHHHHHHHHc-----cCcccEEEEecCCCCC
Q 022316 101 SVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCKA 156 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~va~~~a~~~-----p~~v~~lvl~~~~~~~ 156 (299)
++++.++++.++++.+ +.++++++||||||.++..++.++ |++|+++|+++++...
T Consensus 76 ~~~~~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g 140 (250)
T 3lp5_A 76 NIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNM 140 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTT
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCc
Confidence 6788888888888776 889999999999999999999987 6789999999987654
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-20 Score=145.32 Aligned_cols=164 Identities=10% Similarity=0.012 Sum_probs=113.1
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHH------
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN------ 114 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~------ 114 (299)
+.|+|||+||++.+... |...+..+...||.|+++|+||.+. ...+....+.+.+...
T Consensus 48 ~~p~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~~s~~----------~~~~~~~~~~l~~~~~~~~~~~ 111 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPST------YAGLLSHWASHGFVVAAAETSNAGT----------GREMLACLDYLVRENDTPYGTY 111 (258)
T ss_dssp CEEEEEEECCTTCCGGG------GHHHHHHHHHHTCEEEEECCSCCTT----------SHHHHHHHHHHHHHHHSSSSTT
T ss_pred CceEEEEECCCCCCchh------HHHHHHHHHhCCeEEEEecCCCCcc----------HHHHHHHHHHHHhccccccccc
Confidence 45789999999886633 4334334445699999999996421 1233444444444333
Q ss_pred --hcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhcc
Q 022316 115 --HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK 192 (299)
Q Consensus 115 --~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (299)
.++.++++++||||||.+++.+| .+++|++++++++....
T Consensus 112 ~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~------------------------------------ 153 (258)
T 2fx5_A 112 SGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG------------------------------------ 153 (258)
T ss_dssp TTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS------------------------------------
T ss_pred ccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc------------------------------------
Confidence 44557899999999999999988 56789999998863210
Q ss_pred ccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hh-hHHHhhhcccc
Q 022316 193 EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE-AVHMTSKIDRR 269 (299)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~-~~~~~~~~~~~ 269 (299)
. ......+.++++|+|+|+|++|.++ +. ...+.+.. +.
T Consensus 154 -~-------------------------------------~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~ 194 (258)
T 2fx5_A 154 -L-------------------------------------GHDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRA-NV 194 (258)
T ss_dssp -T-------------------------------------TCCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHC-SS
T ss_pred -c-------------------------------------ccchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhcc-CC
Confidence 0 0001235678899999999999987 33 56666663 34
Q ss_pred CceEEEEcCchhhhHh----HHHHHHHHhhhh
Q 022316 270 YSALVEVWTRVYISLL----GFLVLLASFCES 297 (299)
Q Consensus 270 ~~~~~~~~~~~H~~~~----~f~~~~~~~~~~ 297 (299)
.++++++++++|..+. ++.+.+.+|+++
T Consensus 195 ~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~ 226 (258)
T 2fx5_A 195 PVFWGERRYVSHFEPVGSGGAYRGPSTAWFRF 226 (258)
T ss_dssp CEEEEEESSCCTTSSTTTCGGGHHHHHHHHHH
T ss_pred CeEEEEECCCCCccccchHHHHHHHHHHHHHH
Confidence 5889999999998876 466666677653
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-19 Score=145.92 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=85.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc-CCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-GLG 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~ 119 (299)
++|+|+|+||++.+... | ..+...+..+++|+++|+||+|.+.. ...+++++++++.+.+..+ +.+
T Consensus 100 ~~~~l~~lhg~~~~~~~------~-~~l~~~L~~~~~v~~~d~~g~~~~~~------~~~~~~~~a~~~~~~i~~~~~~~ 166 (329)
T 3tej_A 100 NGPTLFCFHPASGFAWQ------F-SVLSRYLDPQWSIIGIQSPRPNGPMQ------TAANLDEVCEAHLATLLEQQPHG 166 (329)
T ss_dssp SSCEEEEECCTTSCCGG------G-GGGGGTSCTTCEEEEECCCTTTSHHH------HCSSHHHHHHHHHHHHHHHCSSS
T ss_pred CCCcEEEEeCCcccchH------H-HHHHHhcCCCCeEEEeeCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCC
Confidence 67899999999888644 5 34466678899999999999987642 1368999999988777765 557
Q ss_pred cEEEEeeCccHHHHHHHHHH---ccCcccEEEEecCCCC
Q 022316 120 AVMCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLCK 155 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~---~p~~v~~lvl~~~~~~ 155 (299)
+++|+||||||.+|+.+|.+ +|++|.+++++++.+.
T Consensus 167 ~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~ 205 (329)
T 3tej_A 167 PYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPP 205 (329)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCT
T ss_pred CEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCC
Confidence 99999999999999999999 9999999999998764
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.5e-19 Score=137.72 Aligned_cols=201 Identities=13% Similarity=0.065 Sum_probs=128.8
Q ss_pred CCCeEEEecccccchhhhccccccCc--hhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc-
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCP--EACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~--~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l- 116 (299)
+.|+||++||++.+... |.. .+..++. .|+.|+++|.++++.+..+. .....+.+++++..+++..
T Consensus 40 ~~p~vv~~HG~~~~~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~ 109 (263)
T 2uz0_A 40 DIPVLYLLHGMSGNHNS------WLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQY----GFDYYTALAEELPQVLKRFF 109 (263)
T ss_dssp CBCEEEEECCTTCCTTH------HHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTT----SCBHHHHHHTHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHH------HHhccCHHHHHhcCCeEEEEECCCCCccccCCC----cccHHHHHHHHHHHHHHHHh
Confidence 35789999999877644 322 2344444 48999999999887764321 1234677788888888773
Q ss_pred ---C--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhc
Q 022316 117 ---G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (299)
Q Consensus 117 ---~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (299)
. .+++.|+|||+||.+|+.+|. +|++++++|++++........... . ...... .....+.
T Consensus 110 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~~---~------~~~~~~-----~~~~~~~ 174 (263)
T 2uz0_A 110 PNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPES---Q------NLGSPA-----YWRGVFG 174 (263)
T ss_dssp TTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGGG---T------TCSCHH-----HHHHHHC
T ss_pred ccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhccccc---c------ccccch-----hHHHHcC
Confidence 2 368999999999999999999 999999999999877554311100 0 000000 1111222
Q ss_pred cccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccc--ccEEEEecCCCcchhhhHHHhhhccc-
Q 022316 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ--CRSLIFVGESSPFHSEAVHMTSKIDR- 268 (299)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~lii~G~~D~~~~~~~~~~~~~~~- 268 (299)
.... . .+ ...+....+.+++ +|+++++|++|.+++.++.+.+.+..
T Consensus 175 ~~~~-------~-----------------------~~-~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~l~~~ 223 (263)
T 2uz0_A 175 EIRD-------W-----------------------TT-SPYSLESLAKKSDKKTKLWAWCGEQDFLYEANNLAVKNLKKL 223 (263)
T ss_dssp CCSC-------T-----------------------TT-STTSHHHHGGGCCSCSEEEEEEETTSTTHHHHHHHHHHHHHT
T ss_pred Chhh-------h-----------------------cc-ccCCHHHHHHhccCCCeEEEEeCCCchhhHHHHHHHHHHHHC
Confidence 1100 0 00 0122233334443 79999999999998656666665532
Q ss_pred -cCceEEEEcCchhhhH--hHHHHHHHHhhhhc
Q 022316 269 -RYSALVEVWTRVYISL--LGFLVLLASFCESE 298 (299)
Q Consensus 269 -~~~~~~~~~~~~H~~~--~~f~~~~~~~~~~~ 298 (299)
..++++++++ +|... .+.++....|+.+.
T Consensus 224 g~~~~~~~~~g-~H~~~~~~~~~~~~~~~l~~~ 255 (263)
T 2uz0_A 224 GFDVTYSHSAG-THEWYYWEKQLEVFLTTLPID 255 (263)
T ss_dssp TCEEEEEEESC-CSSHHHHHHHHHHHHHHSSSC
T ss_pred CCCeEEEECCC-CcCHHHHHHHHHHHHHHHHhh
Confidence 2468999999 99765 56777777777654
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=141.17 Aligned_cols=198 Identities=10% Similarity=0.043 Sum_probs=111.8
Q ss_pred ceeecCCceEEEEec---cCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 23 NLIKTSHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~---g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
..++.++.+|....+ +.+..|.||++||++.+.... . +......+...||.|+++|+||||.|..........
T Consensus 34 ~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~---~-~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~ 109 (259)
T 4ao6_A 34 FSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVE---Y-IEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPT 109 (259)
T ss_dssp EEEEETTEEEEEEEEEESSSCCSEEEEEEC--------C---H-HHHHHHHHHHTTEEEEEECCCC-------------C
T ss_pred EEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccch---H-HHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccc
Confidence 344556667765544 334557888999998764321 1 112223445679999999999999875422110000
Q ss_pred ---------------ccHHHHHHHHHHHH----HhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh
Q 022316 100 ---------------LSVDDLADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (299)
Q Consensus 100 ---------------~~~~~~~~~l~~~l----~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (299)
........+....+ ...+.+++.++|+|+||.+++.+|...|. +++.|+..+......
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~~~-- 186 (259)
T 4ao6_A 110 DVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEGVN-- 186 (259)
T ss_dssp CGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTSTT--
T ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEecccccccc--
Confidence 01112222333333 33466899999999999999999998874 666655433211000
Q ss_pred HHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcc
Q 022316 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240 (299)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (299)
. .+..+..++
T Consensus 187 ------------------------------------------~----------------------------~~~~~~a~~ 196 (259)
T 4ao6_A 187 ------------------------------------------G----------------------------EDLVRLAPQ 196 (259)
T ss_dssp ------------------------------------------H----------------------------HHHHHHGGG
T ss_pred ------------------------------------------c----------------------------cchhhhhcc
Confidence 0 001112356
Q ss_pred ccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhh-HhHHHHHHHHhhhh
Q 022316 241 LQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYIS-LLGFLVLLASFCES 297 (299)
Q Consensus 241 i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~-~~~f~~~~~~~~~~ 297 (299)
|++|+|+++|++|.++ +.+.++.+.+......++.+|+..|.. -.|..+...+|+.+
T Consensus 197 i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G~H~~~p~~e~~~~~~~fl~~ 256 (259)
T 4ao6_A 197 VTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPGKHSAVPTWEMFAGTVDYLDQ 256 (259)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESSCTTCCCHHHHTHHHHHHHHH
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCCCCCCcCHHHHHHHHHHHHHH
Confidence 8899999999999998 778888888877667888888754432 23445556667665
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=143.14 Aligned_cols=213 Identities=11% Similarity=0.083 Sum_probs=130.0
Q ss_pred CceEEEEeccC-----CCCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCCCC------
Q 022316 29 HGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDD------ 96 (299)
Q Consensus 29 ~~~l~~~~~g~-----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~------ 96 (299)
+..+.+..+-+ .+.|+||++||++.+........ .+..++.+ |+.|+++|.||+|.|.......
T Consensus 26 g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~----~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~ 101 (278)
T 3e4d_A 26 KSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKG----EYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKG 101 (278)
T ss_dssp TEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHS----CCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTT
T ss_pred CCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcc----cHHHHHhhCCeEEEecCCcccCcccccccccccccCC
Confidence 44666666543 23479999999988765411110 12344444 9999999999999875322000
Q ss_pred ------------CCccc-HHHHHHHHHHHHHhc-CC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh
Q 022316 97 ------------EPVLS-VDDLADQIAEVLNHF-GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (299)
Q Consensus 97 ------------~~~~~-~~~~~~~l~~~l~~l-~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (299)
...+. .+.+++++..+++.. ++ ++++|+||||||.+|+.+|.++|++++++++++|........
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~ 181 (278)
T 3e4d_A 102 AGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSAD 181 (278)
T ss_dssp BCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGGCT
T ss_pred ccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccCCc
Confidence 01112 334456777777654 66 789999999999999999999999999999999866532110
Q ss_pred HHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcc
Q 022316 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240 (299)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (299)
+. ...+..+++... .. +.. .+....+.+
T Consensus 182 -~~-------------------~~~~~~~~~~~~--------~~--------~~~----------------~~~~~~~~~ 209 (278)
T 3e4d_A 182 -WS-------------------EPALEKYLGADR--------AA--------WRR----------------YDACSLVED 209 (278)
T ss_dssp -TT-------------------HHHHHHHHCSCG--------GG--------GGG----------------GCHHHHHHT
T ss_pred -cc-------------------hhhHHHhcCCcH--------HH--------HHh----------------cChhhHhhc
Confidence 00 001111222110 00 000 011111111
Q ss_pred --ccccEEEEecCCCcchhh---hHHHhhhcc--ccCceEEEEcCchhhh--HhHHHHHHHHhhhh
Q 022316 241 --LQCRSLIFVGESSPFHSE---AVHMTSKID--RRYSALVEVWTRVYIS--LLGFLVLLASFCES 297 (299)
Q Consensus 241 --i~~P~lii~G~~D~~~~~---~~~~~~~~~--~~~~~~~~~~~~~H~~--~~~f~~~~~~~~~~ 297 (299)
..+|+++++|++|.++.. .+.+.+.+. +..++++++|+++|.. +.++++..-.|+.+
T Consensus 210 ~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~l~~~~~ 275 (278)
T 3e4d_A 210 GARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAE 275 (278)
T ss_dssp TCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSCEEEEEEETTCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEecCCCcccccchhHHHHHHHHHHcCCCceEEEeCCCCcCHHHHHHHHHHHHHHHHH
Confidence 356999999999999843 456655553 2347899999999954 34566666666554
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4e-19 Score=140.67 Aligned_cols=214 Identities=16% Similarity=0.148 Sum_probs=129.6
Q ss_pred CCceEEEEeccC------CCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCC-----
Q 022316 28 SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISD----- 95 (299)
Q Consensus 28 ~~~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~----- 95 (299)
.+..+.+..+-+ ++.|+||++||++.+........ .+..++ ..|+.|+++|.+++|.+......
T Consensus 27 ~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~----~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~ 102 (280)
T 3i6y_A 27 LNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKA----GAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQ 102 (280)
T ss_dssp TTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHS----CCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSST
T ss_pred cCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcc----cHHHHHhhCCeEEEEeCCcccccccCccccccccc
Confidence 344666666543 23579999999987764421111 022333 34899999999988764321100
Q ss_pred ------CC------Cccc-HHHHHHHHHHHHH-hcCC-CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh
Q 022316 96 ------DE------PVLS-VDDLADQIAEVLN-HFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (299)
Q Consensus 96 ------~~------~~~~-~~~~~~~l~~~l~-~l~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (299)
.. .... .+.+.+++..+++ .++. ++++|+||||||.+|+.+|.++|+++++++++++........
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~ 182 (280)
T 3i6y_A 103 GAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNCP 182 (280)
T ss_dssp TCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGSH
T ss_pred CccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccCc
Confidence 00 0012 3445567777774 4455 789999999999999999999999999999999866532211
Q ss_pred HHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcc
Q 022316 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240 (299)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (299)
+. ...+..++.... .. +.. .+....+.+
T Consensus 183 -~~-------------------~~~~~~~~~~~~--------~~--------~~~----------------~~~~~~~~~ 210 (280)
T 3i6y_A 183 -WG-------------------QKAFTAYLGKDT--------DT--------WRE----------------YDASLLMRA 210 (280)
T ss_dssp -HH-------------------HHHHHHHHCSCG--------GG--------TGG----------------GCHHHHHHH
T ss_pred -hH-------------------HHHHHHhcCCch--------HH--------HHh----------------cCHHHHHHh
Confidence 00 001111222110 00 000 111122222
Q ss_pred c--cccEEEEecCCCcchhh---hHHHhhhcc--ccCceEEEEcCchhhh--HhHHHHHHHHhhhh
Q 022316 241 L--QCRSLIFVGESSPFHSE---AVHMTSKID--RRYSALVEVWTRVYIS--LLGFLVLLASFCES 297 (299)
Q Consensus 241 i--~~P~lii~G~~D~~~~~---~~~~~~~~~--~~~~~~~~~~~~~H~~--~~~f~~~~~~~~~~ 297 (299)
+ .+|+++++|++|.++.. ++.+.+.+. +..++++++|+++|.. +.++++....|+.+
T Consensus 211 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~l~~~~~ 276 (280)
T 3i6y_A 211 AKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSYYFIASFIEDHLRFHSN 276 (280)
T ss_dssp CSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSHHHHHHHHHHHHHHHHH
T ss_pred cCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccHHHHHHhHHHHHHHHHh
Confidence 3 47999999999999843 566666553 3347899999999954 34666666666554
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=160.73 Aligned_cols=224 Identities=10% Similarity=0.059 Sum_probs=139.8
Q ss_pred cceeecCCceEEEEeccCC------CCCeEEEecccccchhhhccccccCc-hhhhcc-cCceEEEEECCCCCCCCCCCC
Q 022316 22 DNLIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCP-EACSLL-LHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~~w~~-~~~~~l-~~~~~vi~~D~~G~G~S~~~~ 93 (299)
...++..+.++++..+.++ +.|+||++||++.+..... . |.. ....++ ..||.|+++|+||+|.+....
T Consensus 470 ~~~~~~~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~--~-~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~ 546 (719)
T 1z68_A 470 IKKLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRS--V-FAVNWISYLASKEGMVIALVDGRGTAFQGDKL 546 (719)
T ss_dssp EEEEEETTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCC--C-CCCCHHHHHHHTTCCEEEEEECTTBSSSCHHH
T ss_pred EEEEecCCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccc--c-chhhHHHHHHhcCCeEEEEEcCCCCCCCchhh
Confidence 3455565677877776542 3468999999987642110 1 221 222343 579999999999999875321
Q ss_pred C----CCCCcccHHHHHHHHHHHHHhc--CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhh
Q 022316 94 S----DDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (299)
Q Consensus 94 ~----~~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (299)
. ........+|+.+.+..+.+.- +.+++.++||||||.+++.+|.++|++++++|++++..........
T Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~----- 621 (719)
T 1z68_A 547 LYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASV----- 621 (719)
T ss_dssp HGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHH-----
T ss_pred HHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhccc-----
Confidence 0 0111234566666666655532 2368999999999999999999999999999999987643221100
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccc-cEE
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-RSL 246 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l 246 (299)
....+++.... .+..+.+.. .+....+.++++ |+|
T Consensus 622 -----------------~~~~~~g~~~~-------~~~~~~~~~--------------------~~~~~~~~~~~~~P~l 657 (719)
T 1z68_A 622 -----------------YTERFMGLPTK-------DDNLEHYKN--------------------STVMARAEYFRNVDYL 657 (719)
T ss_dssp -----------------HHHHHHCCSST-------TTTHHHHHH--------------------TCSGGGGGGGTTSEEE
T ss_pred -----------------cchhhcCCccc-------ccchhhhhh--------------------CCHhHHHhcCCCCcEE
Confidence 00111111000 000011111 122344567887 899
Q ss_pred EEecCCCcch--hhhHHHhhhccc--cCceEEEEcCchhhhH----hHHHHHHHHhhhh
Q 022316 247 IFVGESSPFH--SEAVHMTSKIDR--RYSALVEVWTRVYISL----LGFLVLLASFCES 297 (299)
Q Consensus 247 ii~G~~D~~~--~~~~~~~~~~~~--~~~~~~~~~~~~H~~~----~~f~~~~~~~~~~ 297 (299)
+++|++|..+ +.+.++.+.+.. ..++++++|+++|... .++.+.+..|+++
T Consensus 658 i~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 716 (719)
T 1z68_A 658 LIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQ 716 (719)
T ss_dssp EEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHHHHH
Confidence 9999999987 667777776642 3467999999999873 3466667777765
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-20 Score=150.92 Aligned_cols=191 Identities=9% Similarity=0.044 Sum_probs=117.1
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHH---HHhc
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV---LNHF 116 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~---l~~l 116 (299)
++.|+||++||.+..... ... |......+...||.|+++|+||+|.+.. ....++..+.+..+ .+.+
T Consensus 80 ~~~p~vv~~HGgg~~~~~--~~~-~~~~~~~l~~~G~~v~~~d~r~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~ 149 (303)
T 4e15_A 80 NQAPLFVFVHGGYWQEMD--MSM-SCSIVGPLVRRGYRVAVMDYNLCPQVTL-------EQLMTQFTHFLNWIFDYTEMT 149 (303)
T ss_dssp TTCCEEEEECCSTTTSCC--GGG-SCTTHHHHHHTTCEEEEECCCCTTTSCH-------HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcCcCCC--hhH-HHHHHHHHHhCCCEEEEecCCCCCCCCh-------hHHHHHHHHHHHHHHHHhhhc
Confidence 357899999996533211 111 3334344556799999999999986521 12334443333333 3466
Q ss_pred CCCcEEEEeeCccHHHHHHHHHHcc-------CcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhh
Q 022316 117 GLGAVMCMGVTAGAYILTLFAMKYR-------HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (299)
Q Consensus 117 ~~~~~~lvG~S~Gg~va~~~a~~~p-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (299)
+.++++|+||||||.+++.++.+.+ ++|+++|++++.......... . .. .....
T Consensus 150 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~------------~--~~-----~~~~~ 210 (303)
T 4e15_A 150 KVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNL------------E--SV-----NPKNI 210 (303)
T ss_dssp TCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTC------------T--TT-----SGGGT
T ss_pred CCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhcc------------c--cc-----chhhh
Confidence 7789999999999999999987643 379999999987543211100 0 00 00001
Q ss_pred hccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhc----cccccEEEEecCCCcch--hhhHHHh
Q 022316 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR----KLQCRSLIFVGESSPFH--SEAVHMT 263 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~P~lii~G~~D~~~--~~~~~~~ 263 (299)
+... ++. + .........+. ++++|+|+++|++|.++ +.+..+.
T Consensus 211 ~~~~---------~~~-------~---------------~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~ 259 (303)
T 4e15_A 211 LGLN---------ERN-------I---------------ESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYA 259 (303)
T ss_dssp TCCC---------TTT-------T---------------TTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHH
T ss_pred hcCC---------HHH-------H---------------HHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHH
Confidence 1100 000 0 00001101222 34899999999999986 6777777
Q ss_pred hhccc--cCceEEEEcCchhhhHhHHHHH
Q 022316 264 SKIDR--RYSALVEVWTRVYISLLGFLVL 290 (299)
Q Consensus 264 ~~~~~--~~~~~~~~~~~~H~~~~~f~~~ 290 (299)
+.+.. ..++++++|+++|..+.+-+..
T Consensus 260 ~~l~~~g~~~~~~~~~g~~H~~~~~~~~~ 288 (303)
T 4e15_A 260 DVLRKKGYKASFTLFKGYDHFDIIEETAI 288 (303)
T ss_dssp HHHHHHTCCEEEEEEEEEETTHHHHGGGS
T ss_pred HHHHHCCCceEEEEeCCCCchHHHHHHhC
Confidence 77742 3578999999999988775544
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-18 Score=140.42 Aligned_cols=211 Identities=12% Similarity=0.038 Sum_probs=124.6
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh-cC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH-FG 117 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~-l~ 117 (299)
...|+||++||.+....+ ... |...+..+.. .||.|+++|+|+.++.. . ...++|..+.+..+.+. ++
T Consensus 78 ~~~p~vv~~HGGg~~~g~--~~~-~~~~~~~la~~~g~~vv~~dyr~~p~~~--~-----~~~~~D~~~a~~~l~~~~~d 147 (322)
T 3fak_A 78 QAGKAILYLHGGGYVMGS--INT-HRSMVGEISRASQAAALLLDYRLAPEHP--F-----PAAVEDGVAAYRWLLDQGFK 147 (322)
T ss_dssp CTTCEEEEECCSTTTSCC--HHH-HHHHHHHHHHHHTSEEEEECCCCTTTSC--T-----THHHHHHHHHHHHHHHHTCC
T ss_pred CCccEEEEEcCCccccCC--hHH-HHHHHHHHHHhcCCEEEEEeCCCCCCCC--C-----CcHHHHHHHHHHHHHHcCCC
Confidence 457899999996632111 111 2233334444 49999999999876542 1 24567777777777776 44
Q ss_pred CCcEEEEeeCccHHHHHHHHHHccCc----ccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccc
Q 022316 118 LGAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE 193 (299)
Q Consensus 118 ~~~~~lvG~S~Gg~va~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (299)
.++++|+|||+||.+|+.+|.+.+++ ++++|+++|............... . ...
T Consensus 148 ~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~------~----------------~~~ 205 (322)
T 3fak_A 148 PQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRA------E----------------ADP 205 (322)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTT------T----------------TCC
T ss_pred CceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhC------c----------------cCc
Confidence 57999999999999999999988775 999999999776532211000000 0 000
Q ss_pred cccCCCCCchHHHHHHHHhhh-cccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcchhhhHHHhhhcc--ccC
Q 022316 194 VRGNAQVPESDIVQACRRLLD-ERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKID--RRY 270 (299)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~--~~~ 270 (299)
.. .......+...+. ....... .. ......+..+ .|+++++|+.|.+++.+..+.+++. +..
T Consensus 206 ~~------~~~~~~~~~~~~~~~~~~~~~------~~--sp~~~~~~~~-pP~li~~g~~D~~~~~~~~~~~~l~~~g~~ 270 (322)
T 3fak_A 206 MV------APGGINKMAARYLNGADAKHP------YA--SPNFANLKGL-PPLLIHVGRDEVLLDDSIKLDAKAKADGVK 270 (322)
T ss_dssp SC------CSSHHHHHHHHHHTTSCTTCT------TT--CGGGSCCTTC-CCEEEEEETTSTTHHHHHHHHHHHHHTTCC
T ss_pred cc------CHHHHHHHHHHhcCCCCCCCc------cc--CCCcccccCC-ChHhEEEcCcCccHHHHHHHHHHHHHcCCC
Confidence 00 0111111111111 0000000 00 0111112222 3999999999998866666666653 335
Q ss_pred ceEEEEcCchhhhH---------hHHHHHHHHhhhh
Q 022316 271 SALVEVWTRVYISL---------LGFLVLLASFCES 297 (299)
Q Consensus 271 ~~~~~~~~~~H~~~---------~~f~~~~~~~~~~ 297 (299)
++++++|+++|... .++.+.+..|+++
T Consensus 271 ~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (322)
T 3fak_A 271 STLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMRE 306 (322)
T ss_dssp EEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHH
Confidence 78999999999654 4566777777764
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.5e-19 Score=156.67 Aligned_cols=228 Identities=11% Similarity=0.000 Sum_probs=137.6
Q ss_pred CcceeecCC-ceEEEEeccC------CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 21 KDNLIKTSH-GSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 21 ~~~~i~~~~-~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
+...++..+ .++.+..+.+ ++.|+||++||.+..... ..|......++..||.|+++|+||+|.+....
T Consensus 418 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~ 493 (695)
T 2bkl_A 418 EQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNME----ANFRSSILPWLDAGGVYAVANLRGGGEYGKAW 493 (695)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCC----CCCCGGGHHHHHTTCEEEEECCTTSSTTCHHH
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccC----CCcCHHHHHHHhCCCEEEEEecCCCCCcCHHH
Confidence 334455544 4777765432 356889999997655432 11333434466789999999999998663211
Q ss_pred ---C-CCCCcccHHHHHHHHHHHHHhc--CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhh
Q 022316 94 ---S-DDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (299)
Q Consensus 94 ---~-~~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (299)
. .......++|+.+.+..+++.- ..+++.++|||+||.+++.++.++|++++++|+.+|.........
T Consensus 494 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~------ 567 (695)
T 2bkl_A 494 HDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHL------ 567 (695)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG------
T ss_pred HHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccc------
Confidence 0 0011233455555555555442 346899999999999999999999999999999998765432110
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccc--ccE
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ--CRS 245 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~ 245 (299)
....... ...+ +.. . .++..+.+.. .+....+.+++ +|+
T Consensus 568 -------~~~~~~~----~~~~-g~~---~----~~~~~~~~~~--------------------~sp~~~~~~~~~~~P~ 608 (695)
T 2bkl_A 568 -------FGSGRTW----IPEY-GTA---E----KPEDFKTLHA--------------------YSPYHHVRPDVRYPAL 608 (695)
T ss_dssp -------STTGGGG----HHHH-CCT---T----SHHHHHHHHH--------------------HCGGGCCCSSCCCCEE
T ss_pred -------cCCCcch----HHHh-CCC---C----CHHHHHHHHh--------------------cChHhhhhhcCCCCCE
Confidence 0000000 0011 100 0 1222111111 01122334444 699
Q ss_pred EEEecCCCcch--hhhHHHhhhccc-----cCceEEEEcCchhhh------HhHHHHHHHHhhhh
Q 022316 246 LIFVGESSPFH--SEAVHMTSKIDR-----RYSALVEVWTRVYIS------LLGFLVLLASFCES 297 (299)
Q Consensus 246 lii~G~~D~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~H~~------~~~f~~~~~~~~~~ 297 (299)
|+++|++|..+ ..+.++.+++.. ..+.+++++++||.. ..++.+.+.+|+.+
T Consensus 609 Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 673 (695)
T 2bkl_A 609 LMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQ 673 (695)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999987 667777777643 347899999999985 23455666677654
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.8e-19 Score=158.54 Aligned_cols=228 Identities=9% Similarity=-0.012 Sum_probs=134.3
Q ss_pred CcceeecC-CceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC
Q 022316 21 KDNLIKTS-HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (299)
Q Consensus 21 ~~~~i~~~-~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~ 95 (299)
+...++.. +.++.+..+.+ ++.|+||++||.+.+... ..|......++..||.|+++|+||+|.+......
T Consensus 462 ~~~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~ 537 (741)
T 1yr2_A 462 EQVFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALT----PWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHD 537 (741)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCC----CCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHH
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCC----CCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHH
Confidence 34445554 44787766543 357899999998765532 1133444456678999999999999876321110
Q ss_pred ----CCCcccHHHHHHHHHHHHHh--cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhh
Q 022316 96 ----DEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (299)
Q Consensus 96 ----~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (299)
.....+++|+.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+.+|.........
T Consensus 538 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~-------- 609 (741)
T 1yr2_A 538 AGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQ-------- 609 (741)
T ss_dssp TTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGG--------
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccC--------
Confidence 01123467777777777665 2447899999999999999999999999999999998764432110
Q ss_pred hhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcc-ccc-cEEE
Q 022316 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK-LQC-RSLI 247 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~-P~li 247 (299)
....... ...+ +... .++..+.+.. .+....+.+ +++ |+|+
T Consensus 610 -----~~~~~~~----~~~~-g~~~-------~~~~~~~~~~--------------------~sp~~~~~~~~~~~P~Li 652 (741)
T 1yr2_A 610 -----FTAGRYW----VDDY-GYPE-------KEADWRVLRR--------------------YSPYHNVRSGVDYPAILV 652 (741)
T ss_dssp -----STTGGGG----HHHH-CCTT-------SHHHHHHHHT--------------------TCGGGCCCTTSCCCEEEE
T ss_pred -----CCCCchh----HHHc-CCCC-------CHHHHHHHHH--------------------cCchhhhhccCCCCCEEE
Confidence 0000000 0001 1000 1211111111 122233454 775 9999
Q ss_pred EecCCCcch--hhhHHHhhhccc-----cCceEEEEcCchhhhHh------HHHHHHHHhhhh
Q 022316 248 FVGESSPFH--SEAVHMTSKIDR-----RYSALVEVWTRVYISLL------GFLVLLASFCES 297 (299)
Q Consensus 248 i~G~~D~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~H~~~~------~f~~~~~~~~~~ 297 (299)
++|++|..+ ..+.++.+++.. ..+.+++++++||.... ++.+.+.+|+.+
T Consensus 653 ~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 715 (741)
T 1yr2_A 653 TTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAH 715 (741)
T ss_dssp EECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999987 666677666643 34788999999997543 455566677654
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.81 E-value=6.7e-20 Score=144.32 Aligned_cols=108 Identities=15% Similarity=0.194 Sum_probs=77.4
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccC---ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH---NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG 117 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 117 (299)
.++||||+||++.+... ...| ..+.+.+.+ |++|+++|+ |||.|..... ....++.+.++++.+.++...
T Consensus 4 ~~~pvVllHG~~~~~~~---~~~~-~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~--~~~~~~~~~~~~~~~~l~~~~ 76 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCN---PLSM-GAIKKMVEKKIPGIHVLSLEI-GKTLREDVEN--SFFLNVNSQVTTVCQILAKDP 76 (279)
T ss_dssp SSCCEEEECCTTCCSCC---TTTT-HHHHHHHHHHSTTCCEEECCC-SSSHHHHHHH--HHHSCHHHHHHHHHHHHHSCG
T ss_pred CCCcEEEECCCCCCCCC---cccH-HHHHHHHHHHCCCcEEEEEEe-CCCCcccccc--ccccCHHHHHHHHHHHHHhhh
Confidence 45679999999987611 0015 334555554 669999998 9997742100 011466777777777776532
Q ss_pred -C-CcEEEEeeCccHHHHHHHHHHccCc-ccEEEEecCCCC
Q 022316 118 -L-GAVMCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCK 155 (299)
Q Consensus 118 -~-~~~~lvG~S~Gg~va~~~a~~~p~~-v~~lvl~~~~~~ 155 (299)
. +++++|||||||.++..+|.++|++ |+++|+++++..
T Consensus 77 ~l~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~~ 117 (279)
T 1ei9_A 77 KLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp GGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred hccCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCccC
Confidence 2 7899999999999999999999984 999999997543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=155.84 Aligned_cols=221 Identities=11% Similarity=0.072 Sum_probs=137.7
Q ss_pred eecCCceEEEEeccCC------CCCeEEEecccccchhhhccccccC-chhhhcc-cCceEEEEECCCCCCCCCCCC---
Q 022316 25 IKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFC-PEACSLL-LHNFCIYHINPPGHEFGAAAI--- 93 (299)
Q Consensus 25 i~~~~~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~~w~-~~~~~~l-~~~~~vi~~D~~G~G~S~~~~--- 93 (299)
+..++..+.+..+.+. +.|+||++||.+.+..... . |. .....++ ..||.|+++|+||+|.+....
T Consensus 479 ~~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~--~-~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~ 555 (740)
T 4a5s_A 479 IILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADT--V-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHA 555 (740)
T ss_dssp EEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCC--C-CCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGG
T ss_pred EccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCccccccc--c-cCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHH
Confidence 4446667888776543 2478999999876632111 1 21 1223344 379999999999999664311
Q ss_pred -CCCCCcccHHHHHHHHHHHHHhc--CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhh
Q 022316 94 -SDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (299)
Q Consensus 94 -~~~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (299)
........++|+.+.+..+.+.- +.+++.|+||||||.+++.+|.++|++++++|+++|.........
T Consensus 556 ~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~--------- 626 (740)
T 4a5s_A 556 INRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDS--------- 626 (740)
T ss_dssp GTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBH---------
T ss_pred HHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhh---------
Confidence 01112234666666666655321 227899999999999999999999999999999998764221100
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccc-cEEEEe
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-RSLIFV 249 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~lii~ 249 (299)
. ...++++.... .+..+.+.. .+....+.++++ |+|+++
T Consensus 627 ---------~----~~~~~~~~p~~-------~~~~~~~~~--------------------~~~~~~~~~i~~~P~Lii~ 666 (740)
T 4a5s_A 627 ---------V----YTERYMGLPTP-------EDNLDHYRN--------------------STVMSRAENFKQVEYLLIH 666 (740)
T ss_dssp ---------H----HHHHHHCCSST-------TTTHHHHHH--------------------SCSGGGGGGGGGSEEEEEE
T ss_pred ---------H----HHHHHcCCCCc-------cccHHHHHh--------------------CCHHHHHhcCCCCcEEEEE
Confidence 0 11111111100 111111111 223344667776 999999
Q ss_pred cCCCcch--hhhHHHhhhcc--ccCceEEEEcCchhhh-----HhHHHHHHHHhhhh
Q 022316 250 GESSPFH--SEAVHMTSKID--RRYSALVEVWTRVYIS-----LLGFLVLLASFCES 297 (299)
Q Consensus 250 G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~-----~~~f~~~~~~~~~~ 297 (299)
|+.|..+ +.+.++.+.+. +..++++++|+++|.. ..++.+.+..|+++
T Consensus 667 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 723 (740)
T 4a5s_A 667 GTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQ 723 (740)
T ss_dssp ETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHH
Confidence 9999987 66777777663 2347889999999987 23456666677765
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=162.05 Aligned_cols=225 Identities=12% Similarity=0.094 Sum_probs=142.7
Q ss_pred CCcceeecCCceEEEEeccCC------CCCeEEEecccccchhhhccccccC-chhhhccc-CceEEEEECCCCCCCCCC
Q 022316 20 GKDNLIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFC-PEACSLLL-HNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~~w~-~~~~~~l~-~~~~vi~~D~~G~G~S~~ 91 (299)
.+...++..+|++.+..+.+. +.|+||++||.+.+.... .. |. ......+. .||.|+++|+||+|.+..
T Consensus 468 ~~~~~~~~~~g~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~--~~-~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~ 544 (723)
T 1xfd_A 468 VEYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVA--EK-FEVSWETVMVSSHGAVVVKCDGRGSGFQGT 544 (723)
T ss_dssp CCBCCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCC--CC-CCCSHHHHHHHTTCCEEECCCCTTCSSSHH
T ss_pred ceEEEEEcCCceEEEEEEeCCCCCCCCccCEEEEEcCCCCccccC--cc-ccccHHHHHhhcCCEEEEEECCCCCccccH
Confidence 344556666667776665432 347899999987653211 01 21 12234454 699999999999997421
Q ss_pred C----CCCCCCcccHHHHHHHHHHHHHhc--CCCcEEEEeeCccHHHHHHHHHHc----cCcccEEEEecCCCCCcchhH
Q 022316 92 A----ISDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKAPSWTE 161 (299)
Q Consensus 92 ~----~~~~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~va~~~a~~~----p~~v~~lvl~~~~~~~~~~~~ 161 (299)
. .........++|+.+.+..+.+.- +.++++|+||||||.+++.+|.++ |++++++|++++.........
T Consensus 545 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~ 624 (723)
T 1xfd_A 545 KLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYAS 624 (723)
T ss_dssp HHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBH
T ss_pred HHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhh
Confidence 0 011122356777777777655542 346899999999999999999999 999999999998654321100
Q ss_pred HHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccc
Q 022316 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL 241 (299)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 241 (299)
. ....++..... .. . . ....+....+.++
T Consensus 625 ------------------~----~~~~~~~~~~~------~~---------------~-------~-~~~~~~~~~~~~~ 653 (723)
T 1xfd_A 625 ------------------A----FSERYLGLHGL------DN---------------R-------A-YEMTKVAHRVSAL 653 (723)
T ss_dssp ------------------H----HHHHHHCCCSS------CC---------------S-------S-TTTTCTHHHHTSC
T ss_pred ------------------h----ccHhhcCCccC------Ch---------------h-------H-HHhcChhhHHhhc
Confidence 0 00111110000 00 0 0 0112333456778
Q ss_pred c-ccEEEEecCCCcch--hhhHHHhhhcc--ccCceEEEEcCchhhh-----HhHHHHHHHHhhhhc
Q 022316 242 Q-CRSLIFVGESSPFH--SEAVHMTSKID--RRYSALVEVWTRVYIS-----LLGFLVLLASFCESE 298 (299)
Q Consensus 242 ~-~P~lii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~-----~~~f~~~~~~~~~~~ 298 (299)
+ +|+|+++|++|..+ +.+.++.+.+. +..++++++|+++|.. ..++.+.+..|+++.
T Consensus 654 ~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 720 (723)
T 1xfd_A 654 EEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 720 (723)
T ss_dssp CSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHH
Confidence 8 89999999999997 56677776663 2357899999999987 235677777887754
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.6e-19 Score=122.93 Aligned_cols=100 Identities=14% Similarity=0.101 Sum_probs=82.1
Q ss_pred cceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
...++.++.+++|...| ++|+|||+| .+.. .|... +.++|+|+++|+||||.|..+.. .
T Consensus 4 ~~~~~~~g~~~~~~~~g--~~~~vv~~H---~~~~------~~~~~----l~~~~~v~~~d~~G~G~s~~~~~-----~- 62 (131)
T 2dst_A 4 AGYLHLYGLNLVFDRVG--KGPPVLLVA---EEAS------RWPEA----LPEGYAFYLLDLPGYGRTEGPRM-----A- 62 (131)
T ss_dssp EEEEEETTEEEEEEEEC--CSSEEEEES---SSGG------GCCSC----CCTTSEEEEECCTTSTTCCCCCC-----C-
T ss_pred eEEEEECCEEEEEEEcC--CCCeEEEEc---CCHH------HHHHH----HhCCcEEEEECCCCCCCCCCCCC-----C-
Confidence 35677788899999988 478899999 2221 15333 66779999999999999964322 2
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC
Q 022316 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~ 142 (299)
++++++++.++++.++.++++++||||||.+++.+|.++|.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 63 PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999984
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8.2e-19 Score=156.42 Aligned_cols=228 Identities=7% Similarity=-0.029 Sum_probs=139.1
Q ss_pred CcceeecC-CceEEEEeccC------CCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCC
Q 022316 21 KDNLIKTS-HGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAA 92 (299)
Q Consensus 21 ~~~~i~~~-~~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~ 92 (299)
+...++.. +.+|.+..+.+ ++.|+||++||.+.+... ..|......++. .||.|+++|+||+|.+...
T Consensus 438 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~----~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~ 513 (710)
T 2xdw_A 438 VQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISIT----PNYSVSRLIFVRHMGGVLAVANIRGGGEYGET 513 (710)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCC----CCCCHHHHHHHHHHCCEEEEECCTTSSTTHHH
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCC----CcccHHHHHHHHhCCcEEEEEccCCCCCCChH
Confidence 33445554 44777665432 246899999998765432 113333456667 8999999999999876321
Q ss_pred CC----CCCCcccHHHHHHHHHHHHHh--cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhh
Q 022316 93 IS----DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (299)
Q Consensus 93 ~~----~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (299)
.. .......++|+.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+.+|..........
T Consensus 514 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~---- 589 (710)
T 2xdw_A 514 WHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY---- 589 (710)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS----
T ss_pred HHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcccc----
Confidence 10 001123456777766666665 23478999999999999999999999999999999987644221100
Q ss_pred hhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhc-----cc
Q 022316 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR-----KL 241 (299)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i 241 (299)
...... ...+ +.. . .++..+.+... +....+. ++
T Consensus 590 ---------~~~~~~----~~~~-g~~---~----~~~~~~~~~~~--------------------sp~~~~~~~~~~~~ 628 (710)
T 2xdw_A 590 ---------TIGHAW----TTDY-GCS---D----SKQHFEWLIKY--------------------SPLHNVKLPEADDI 628 (710)
T ss_dssp ---------TTGGGG----HHHH-CCT---T----SHHHHHHHHHH--------------------CGGGCCCCCSSTTC
T ss_pred ---------CCChhH----HHhC-CCC---C----CHHHHHHHHHh--------------------CcHhhhcccccccC
Confidence 000000 0001 100 0 12222211110 1112233 67
Q ss_pred cc-cEEEEecCCCcch--hhhHHHhhhcc---------ccCceEEEEcCchhhhH------hHHHHHHHHhhhh
Q 022316 242 QC-RSLIFVGESSPFH--SEAVHMTSKID---------RRYSALVEVWTRVYISL------LGFLVLLASFCES 297 (299)
Q Consensus 242 ~~-P~lii~G~~D~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~H~~~------~~f~~~~~~~~~~ 297 (299)
++ |+|+++|++|..+ ..+.++.+++. +..+.+++++++||... .++.+.+.+|+.+
T Consensus 629 ~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 702 (710)
T 2xdw_A 629 QYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIAR 702 (710)
T ss_dssp CCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 87 9999999999987 56666666653 23468999999999643 3455566677654
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-18 Score=138.24 Aligned_cols=228 Identities=14% Similarity=0.103 Sum_probs=131.9
Q ss_pred CcceeecCCc-eEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCCCC
Q 022316 21 KDNLIKTSHG-SLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 21 ~~~~i~~~~~-~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
++..+...+| .|.++.+.+ +..|+||++||.|....+. .. |...+..+..+ |+.|+++|+|+.++...
T Consensus 61 ~~~~i~~~~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~--~~-~~~~~~~la~~~g~~vv~~dyr~~p~~~~----- 132 (317)
T 3qh4_A 61 ADDVVTGEAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNL--DT-DHRQCLELARRARCAVVSVDYRLAPEHPY----- 132 (317)
T ss_dssp EEEEEECTTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCT--TT-THHHHHHHHHHHTSEEEEECCCCTTTSCT-----
T ss_pred EEEEecCCCCCeEEEEEEecCCCCCcEEEEECCCcCccCCh--HH-HHHHHHHHHHHcCCEEEEecCCCCCCCCC-----
Confidence 3445666556 777776654 3567999999877422111 11 32343444433 99999999998765421
Q ss_pred CCcccHHHHHHHHHHHHHh---cCC--CcEEEEeeCccHHHHHHHHHHccCc----ccEEEEecCCCCCcchhHHHHhhh
Q 022316 97 EPVLSVDDLADQIAEVLNH---FGL--GAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKV 167 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~---l~~--~~~~lvG~S~Gg~va~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~ 167 (299)
...++|..+.+..+.+. +++ ++++|+|||+||.+|+.+|.+++++ ++++++++|............ .
T Consensus 133 --p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~--~ 208 (317)
T 3qh4_A 133 --PAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASRSE--F 208 (317)
T ss_dssp --THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCHHHHH--T
T ss_pred --chHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCCCcCHHH--h
Confidence 13455555555544443 454 5899999999999999999987764 999999999776541111000 0
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHH-hhhcccccchHHHHHhhcCCCChhhhhccccccEE
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 246 (299)
. ...... ......+.. ........... . ......+..+ .|++
T Consensus 209 -~---~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~-------~-p~~~~~l~~l-pP~l 251 (317)
T 3qh4_A 209 -R---ATPAFD------------------------GEAASLMWRHYLAGQTPSPES-------V-PGRRGQLAGL-PATL 251 (317)
T ss_dssp -T---TCSSSC------------------------HHHHHHHHHHHHTTCCCCTTT-------C-GGGCSCCTTC-CCEE
T ss_pred -c---CCCCcC------------------------HHHHHHHHHHhcCCCCCCccc-------C-CCcccccCCC-Ccee
Confidence 0 000000 111111111 11110000000 0 0000112222 3999
Q ss_pred EEecCCCcchhhhHHHhhhcc--ccCceEEEEcCchhhhH---------hHHHHHHHHhhhh
Q 022316 247 IFVGESSPFHSEAVHMTSKID--RRYSALVEVWTRVYISL---------LGFLVLLASFCES 297 (299)
Q Consensus 247 ii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~---------~~f~~~~~~~~~~ 297 (299)
+++|++|.+++....+.+++. +..++++++|+++|... .++++.+..|+++
T Consensus 252 i~~G~~D~~~~~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~ 313 (317)
T 3qh4_A 252 ITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALAD 313 (317)
T ss_dssp EEEEEESTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHH
T ss_pred EEecCcCCCchhHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHH
Confidence 999999999865555555542 33589999999999733 5677888888765
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-18 Score=138.84 Aligned_cols=105 Identities=18% Similarity=0.192 Sum_probs=80.7
Q ss_pred eEEEecc--cccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc-CCCc
Q 022316 44 ALVTYPD--LALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-GLGA 120 (299)
Q Consensus 44 ~lvl~HG--~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~ 120 (299)
+|+|+|| .+.+... | ..+...+..+++|+++|+||+|.+..+. ......+++++++++.+.++.+ +.++
T Consensus 91 ~l~~~hg~g~~~~~~~------~-~~l~~~L~~~~~v~~~d~~G~g~~~~~~-~~~~~~~~~~~a~~~~~~i~~~~~~~p 162 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHE------F-LRLSTSFQEERDFLAVPLPGYGTGTGTG-TALLPADLDTALDAQARAILRAAGDAP 162 (319)
T ss_dssp EEEEECCCCTTCSTTT------T-HHHHHTTTTTCCEEEECCTTCCBC---C-BCCEESSHHHHHHHHHHHHHHHHTTSC
T ss_pred cEEEeCCCCCCCcHHH------H-HHHHHhcCCCCceEEecCCCCCCCcccc-cCCCCCCHHHHHHHHHHHHHHhcCCCC
Confidence 8999998 3444322 5 3446677789999999999999872100 0112479999999999998876 4678
Q ss_pred EEEEeeCccHHHHHHHHHHcc----CcccEEEEecCCCCC
Q 022316 121 VMCMGVTAGAYILTLFAMKYR----HRVLGLILVSPLCKA 156 (299)
Q Consensus 121 ~~lvG~S~Gg~va~~~a~~~p----~~v~~lvl~~~~~~~ 156 (299)
++|+||||||.+|+.+|.+.+ ++|+++|++++....
T Consensus 163 ~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~ 202 (319)
T 2hfk_A 163 VVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPG 202 (319)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTT
T ss_pred EEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCC
Confidence 999999999999999999874 569999999986543
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-18 Score=136.28 Aligned_cols=114 Identities=10% Similarity=0.066 Sum_probs=74.8
Q ss_pred CCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 28 ~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
++..+.+........|+||++||+|....+. .. |...+...+ ..|++|+++|+|+.++. .+.+..
T Consensus 13 ~~~~~~~y~p~~~~~p~iv~~HGGg~~~g~~--~~-~~~~~~~~l~~~g~~Vi~vdYrlaPe~-----------~~p~~~ 78 (274)
T 2qru_A 13 NGATVTIYPTTTEPTNYVVYLHGGGMIYGTK--SD-LPEELKELFTSNGYTVLALDYLLAPNT-----------KIDHIL 78 (274)
T ss_dssp TSCEEEEECCSSSSCEEEEEECCSTTTSCCG--GG-CCHHHHHHHHTTTEEEEEECCCCTTTS-----------CHHHHH
T ss_pred CCeeEEEEcCCCCCCcEEEEEeCccccCCCh--hh-chHHHHHHHHHCCCEEEEeCCCCCCCC-----------CCcHHH
Confidence 4446655443223568899999988432221 11 223333434 45899999999986422 334444
Q ss_pred HHHHHHH----HhcC-CCcEEEEeeCccHHHHHHHHH---HccCcccEEEEecCCCC
Q 022316 107 DQIAEVL----NHFG-LGAVMCMGVTAGAYILTLFAM---KYRHRVLGLILVSPLCK 155 (299)
Q Consensus 107 ~~l~~~l----~~l~-~~~~~lvG~S~Gg~va~~~a~---~~p~~v~~lvl~~~~~~ 155 (299)
+|+.+++ +... .++++|+|+|+||.+|+.+|. ..+.++++++++.+...
T Consensus 79 ~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~ 135 (274)
T 2qru_A 79 RTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTD 135 (274)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSC
T ss_pred HHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEccccc
Confidence 5444444 4433 689999999999999999987 35778999999877554
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-18 Score=136.09 Aligned_cols=110 Identities=13% Similarity=0.167 Sum_probs=76.1
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceE----EEEECCCCCC------CCCC--CCC-----CCCCcccHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC----IYHINPPGHE------FGAA--AIS-----DDEPVLSVD 103 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~----vi~~D~~G~G------~S~~--~~~-----~~~~~~~~~ 103 (299)
+++||||+||++.+... |... ...|.+.+. ++++|..++| .+.. ..+ .....++++
T Consensus 2 ~~~pvvllHG~~~~~~~------~~~l-~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 74 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASS------LDKM-ADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPD 74 (254)
T ss_dssp CCCCEEEECCTTCCTTT------THHH-HHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHH
T ss_pred CCCCEEEECCCCCCcch------HHHH-HHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHH
Confidence 46789999999998755 6343 455554333 4444333333 1211 111 001236888
Q ss_pred HHHHHH----HHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC-----cccEEEEecCCCCCc
Q 022316 104 DLADQI----AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKAP 157 (299)
Q Consensus 104 ~~~~~l----~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~-----~v~~lvl~~~~~~~~ 157 (299)
++++++ ..+.+.+++++++++||||||.+++.++.++|+ +|+++|+++++....
T Consensus 75 ~~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~ 137 (254)
T 3ds8_A 75 DWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDL 137 (254)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCS
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcc
Confidence 888888 555566788999999999999999999999998 899999999876543
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.5e-18 Score=131.61 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=77.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCce--EEEEECCCCCCCCCCC--CCC------------CCCcccHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF--CIYHINPPGHEFGAAA--ISD------------DEPVLSVDD 104 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~--~vi~~D~~G~G~S~~~--~~~------------~~~~~~~~~ 104 (299)
+.+||||+||++.+... |...+..+...|+ +|+++|.+++|.+... .+. .....++.+
T Consensus 5 ~~~pvvliHG~~~~~~~------~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~ 78 (249)
T 3fle_A 5 KTTATLFLHGYGGSERS------ETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKE 78 (249)
T ss_dssp CCEEEEEECCTTCCGGG------THHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHH
T ss_pred CCCcEEEECCCCCChhH------HHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHH
Confidence 46789999999998865 6444334434464 7999999999865211 100 001224444
Q ss_pred HHHHHHHHH----HhcCCCcEEEEeeCccHHHHHHHHHHccC-----cccEEEEecCCCCC
Q 022316 105 LADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKA 156 (299)
Q Consensus 105 ~~~~l~~~l----~~l~~~~~~lvG~S~Gg~va~~~a~~~p~-----~v~~lvl~~~~~~~ 156 (299)
+++++.+++ +.+++++++++||||||.+++.++.++|+ +|+++|+++++...
T Consensus 79 ~~~~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g 139 (249)
T 3fle_A 79 NAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNG 139 (249)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTC
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCC
Confidence 455554444 55688999999999999999999999974 79999999987644
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.79 E-value=9.1e-18 Score=139.45 Aligned_cols=115 Identities=15% Similarity=-0.010 Sum_probs=77.3
Q ss_pred CCCeEEEecccccchhhhcc-----ccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC----cccHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQ-----GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP----VLSVDDLADQIAE 111 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~-----~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~----~~~~~~~~~~l~~ 111 (299)
+.|+||++||++.+...+.. ...|...+..++.+||+|+++|+||||.|......... ...+.+.++++..
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~ 157 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARS 157 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHH
Confidence 45788999999887543111 11133555666678999999999999998532211000 1356667777788
Q ss_pred HHHhcCC---CcEEEEeeCccHHHHHHHHHH-ccC-----cccEEEEecCCCC
Q 022316 112 VLNHFGL---GAVMCMGVTAGAYILTLFAMK-YRH-----RVLGLILVSPLCK 155 (299)
Q Consensus 112 ~l~~l~~---~~~~lvG~S~Gg~va~~~a~~-~p~-----~v~~lvl~~~~~~ 155 (299)
+++.+++ ++++|+||||||.+++.+|.. .++ .+.+++..+++..
T Consensus 158 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 158 VLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYA 210 (397)
T ss_dssp HHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSS
T ss_pred HHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccccc
Confidence 8888887 689999999999999988733 331 4566666555443
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-18 Score=139.95 Aligned_cols=218 Identities=12% Similarity=0.028 Sum_probs=122.6
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh----
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---- 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~---- 115 (299)
+.|+||++||.+....+..... |...+..+..+ ||.|+++|+|+.+... . ...++|..+.+..+.+.
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~-~~~~~~~la~~~g~~Vv~~dyR~~p~~~--~-----~~~~~D~~~a~~~l~~~~~~~ 182 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTI-YDSLCRRFVKLSKGVVVSVNYRRAPEHR--Y-----PCAYDDGWTALKWVMSQPFMR 182 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHH-HHHHHHHHHHHHTSEEEEECCCCTTTSC--T-----THHHHHHHHHHHHHHHCTTTE
T ss_pred cceEEEEEcCCccccCCCchhh-HHHHHHHHHHHCCCEEEEeeCCCCCCCC--C-----cHHHHHHHHHHHHHHhCchhh
Confidence 3489999999875433222212 22333444454 9999999999875331 1 13455655555555432
Q ss_pred --cCCC-cEEEEeeCccHHHHHHHHHHccC---cccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhh
Q 022316 116 --FGLG-AVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (299)
Q Consensus 116 --l~~~-~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (299)
.+.+ +++|+|+|+||.+|+.+|.+.++ +++++|+++|............... ......
T Consensus 183 ~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~-----~~~~~~----------- 246 (365)
T 3ebl_A 183 SGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLD-----GKYFVT----------- 246 (365)
T ss_dssp ETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHT-----TTSSCC-----------
T ss_pred hCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcC-----CCcccC-----------
Confidence 2335 89999999999999999998876 7999999999876542221110000 000000
Q ss_pred hccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccc-ccEEEEecCCCcchhhhHHHhhhcc-
Q 022316 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ-CRSLIFVGESSPFHSEAVHMTSKID- 267 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~lii~G~~D~~~~~~~~~~~~~~- 267 (299)
......+..................+ ......+..+. .|+|+++|++|.+++....+.+++.
T Consensus 247 -------------~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~ 310 (365)
T 3ebl_A 247 -------------LQDRDWYWKAYLPEDADRDHPACNPF---GPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALRE 310 (365)
T ss_dssp -------------HHHHHHHHHHHSCTTCCTTSTTTCTT---STTCCCCTTSCCCCEEEEEETTSTTHHHHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHhCCCCCCCCCcccCCC---CCcchhhccCCCCCEEEEEcCcccchhHHHHHHHHHHH
Confidence 11111111111000000000000000 00111233223 4899999999988755556665552
Q ss_pred -ccCceEEEEcCchhhhH--------hHHHHHHHHhhhhc
Q 022316 268 -RRYSALVEVWTRVYISL--------LGFLVLLASFCESE 298 (299)
Q Consensus 268 -~~~~~~~~~~~~~H~~~--------~~f~~~~~~~~~~~ 298 (299)
+..++++++|+++|... .++++.+.+|+++.
T Consensus 311 ~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~ 350 (365)
T 3ebl_A 311 DGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNAN 350 (365)
T ss_dssp TTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHh
Confidence 34589999999999643 35777888888753
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=134.79 Aligned_cols=92 Identities=16% Similarity=0.211 Sum_probs=73.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC-CC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LG 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~ 119 (299)
++++|+|+||++.+... | ..+...+..+++|+++|+||++ ++++++.+.++.+. .+
T Consensus 21 ~~~~l~~~hg~~~~~~~------~-~~~~~~l~~~~~v~~~d~~g~~----------------~~~~~~~~~i~~~~~~~ 77 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIY------F-KDLALQLNHKAAVYGFHFIEED----------------SRIEQYVSRITEIQPEG 77 (244)
T ss_dssp CSSEEEEECCTTCCGGG------G-HHHHHHTTTTSEEEEECCCCST----------------THHHHHHHHHHHHCSSS
T ss_pred CCCCEEEECCCCCCHHH------H-HHHHHHhCCCceEEEEcCCCHH----------------HHHHHHHHHHHHhCCCC
Confidence 56789999999887644 5 3445667789999999999973 13455666666664 47
Q ss_pred cEEEEeeCccHHHHHHHHHHc---cCcccEEEEecCCCC
Q 022316 120 AVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCK 155 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~---p~~v~~lvl~~~~~~ 155 (299)
+++|+||||||.+|+.+|.+. +++|.++|++++...
T Consensus 78 ~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~ 116 (244)
T 2cb9_A 78 PYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKK 116 (244)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCC
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCC
Confidence 899999999999999999886 578999999998654
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.78 E-value=6.7e-18 Score=129.68 Aligned_cols=91 Identities=18% Similarity=0.226 Sum_probs=70.2
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC-C
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-G 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~ 119 (299)
++++|+|+||++.+... | ..+...+.+ ++|+++|+||+|. .++++.++++.+.. +
T Consensus 16 ~~~~l~~~hg~~~~~~~------~-~~~~~~l~~-~~v~~~d~~g~~~----------------~~~~~~~~i~~~~~~~ 71 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGLM------Y-QNLSSRLPS-YKLCAFDFIEEED----------------RLDRYADLIQKLQPEG 71 (230)
T ss_dssp CSEEEEEECCTTCCGGG------G-HHHHHHCTT-EEEEEECCCCSTT----------------HHHHHHHHHHHHCCSS
T ss_pred CCCCEEEECCCCCchHH------H-HHHHHhcCC-CeEEEecCCCHHH----------------HHHHHHHHHHHhCCCC
Confidence 56789999999887644 5 344566667 9999999999863 23355555666554 6
Q ss_pred cEEEEeeCccHHHHHHHHHHcc---CcccEEEEecCCCC
Q 022316 120 AVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCK 155 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~~~ 155 (299)
+++++||||||.+|+.+|.+.+ +++++++++++...
T Consensus 72 ~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~ 110 (230)
T 1jmk_C 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKK 110 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEE
T ss_pred CeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCC
Confidence 8999999999999999998875 67999999997653
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6e-18 Score=135.49 Aligned_cols=105 Identities=12% Similarity=0.149 Sum_probs=83.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (299)
++++|||+||++.+.... |...+.+.| ..||+|+++|+||||.++. ..+.+++++.+..+++..+.+
T Consensus 30 ~~~~VvllHG~~~~~~~~-----~~~~l~~~L~~~G~~v~~~d~~g~g~~~~-------~~~~~~l~~~i~~~~~~~g~~ 97 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQS-----FDSNWIPLSTQLGYTPCWISPPPFMLNDT-------QVNTEYMVNAITALYAGSGNN 97 (317)
T ss_dssp CSSEEEEECCTTCCHHHH-----HTTTHHHHHHTTTCEEEEECCTTTTCSCH-------HHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEEECCCCCCcchh-----hHHHHHHHHHhCCCEEEEECCCCCCCCcH-------HHHHHHHHHHHHHHHHHhCCC
Confidence 567899999999886431 331334555 4599999999999987631 245677888888888888889
Q ss_pred cEEEEeeCccHHHHHHHHHHcc---CcccEEEEecCCCCCc
Q 022316 120 AVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAP 157 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~~~~~ 157 (299)
+++||||||||.++..++.++| ++|+++|+++++....
T Consensus 98 ~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~ 138 (317)
T 1tca_A 98 KLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 138 (317)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCB
T ss_pred CEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCC
Confidence 9999999999999999988876 7899999999876543
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-17 Score=148.25 Aligned_cols=226 Identities=6% Similarity=-0.049 Sum_probs=132.7
Q ss_pred ceeecCC-ceEEEEeccC------CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCC-
Q 022316 23 NLIKTSH-GSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS- 94 (299)
Q Consensus 23 ~~i~~~~-~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~- 94 (299)
..++..+ .+|.+..+.+ ++.|+||++||....... ..|......++..||.|+++|+||.|.......
T Consensus 428 ~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~ 503 (693)
T 3iuj_A 428 RFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLT----PSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHL 503 (693)
T ss_dssp EEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCC----CCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHH
T ss_pred EEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCC----CccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHH
Confidence 3445444 4676655422 356899999997554322 113344456667899999999999986532110
Q ss_pred ---CCCCcccHHHHHHHHHHHHHh--cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhh
Q 022316 95 ---DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (299)
Q Consensus 95 ---~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (299)
.......++|+.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..|..........
T Consensus 504 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~------- 576 (693)
T 3iuj_A 504 AGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTF------- 576 (693)
T ss_dssp TTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGS-------
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccC-------
Confidence 011123466777777766665 22368999999999999999999999999999999887654321110
Q ss_pred hhHHhhcchhHHHHHHHHhhhccccccCCCCCchHH-HHHHHHhhhcccccchHHHHHhhcCCCChhhhhcc-cccc-EE
Q 022316 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDI-VQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK-LQCR-SL 246 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P-~l 246 (299)
...... .. .++... .++. .+.+.. .+....+.+ +++| +|
T Consensus 577 ------~~~~~~----~~-~~g~p~-------~~~~~~~~~~~--------------------~sp~~~~~~~~~~Pp~L 618 (693)
T 3iuj_A 577 ------TAGTGW----AY-DYGTSA-------DSEAMFDYLKG--------------------YSPLHNVRPGVSYPSTM 618 (693)
T ss_dssp ------GGGGGC----HH-HHCCTT-------SCHHHHHHHHH--------------------HCHHHHCCTTCCCCEEE
T ss_pred ------CCchhH----HH-HcCCcc-------CHHHHHHHHHh--------------------cCHHHhhcccCCCCcee
Confidence 000000 00 011100 1111 111111 122234555 7888 99
Q ss_pred EEecCCCcch--hhhHHHhhhccc-----cCceEEEEcCchhhhHh------HHHHHHHHhhhh
Q 022316 247 IFVGESSPFH--SEAVHMTSKIDR-----RYSALVEVWTRVYISLL------GFLVLLASFCES 297 (299)
Q Consensus 247 ii~G~~D~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~H~~~~------~f~~~~~~~~~~ 297 (299)
+++|++|..+ ..+.++.+++.. ..+.+++++++||.... ++.+.+.+|+.+
T Consensus 619 i~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 682 (693)
T 3iuj_A 619 VTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLY 682 (693)
T ss_dssp EEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999999987 666667666632 34789999999996542 445555677654
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-18 Score=134.50 Aligned_cols=218 Identities=12% Similarity=0.115 Sum_probs=121.4
Q ss_pred CCceEEEEeccC-----CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECC--CCCCCCCCCCC------
Q 022316 28 SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINP--PGHEFGAAAIS------ 94 (299)
Q Consensus 28 ~~~~l~~~~~g~-----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~--~G~G~S~~~~~------ 94 (299)
.+..+.+..+-+ ++.|+||++||++.+........ .....+...||.|+++|. ||+|.+.....
T Consensus 26 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~---~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~ 102 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKS---GYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTG 102 (282)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHS---CCHHHHHHHTCEEEEECSCSSCCCC--------CCCC
T ss_pred cCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcc---hHHHHhhcCCeEEEEeccccCccccccccccccccCC
Confidence 345666666543 23578999999988765421111 111222356999999999 66654321100
Q ss_pred ----CCCCc-------ccHHHHHHHHHHHHH-hcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh
Q 022316 95 ----DDEPV-------LSVDDLADQIAEVLN-HFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (299)
Q Consensus 95 ----~~~~~-------~~~~~~~~~l~~~l~-~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (299)
..... ......++++..+++ .+++ +++.|+||||||.+|+.+|.++|+++++++++++........
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~ 182 (282)
T 3fcx_A 103 AGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCP 182 (282)
T ss_dssp CCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGGSH
T ss_pred cccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCcccCc
Confidence 00000 112334556666666 5554 689999999999999999999999999999999876532210
Q ss_pred HHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcc
Q 022316 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240 (299)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (299)
+. ...+...+..... .+... .. ......+..
T Consensus 183 -~~-------------------~~~~~~~~~~~~~----------------~~~~~---~~----------~~~~~~~~~ 213 (282)
T 3fcx_A 183 -WG-------------------KKAFSGYLGTDQS----------------KWKAY---DA----------THLVKSYPG 213 (282)
T ss_dssp -HH-------------------HHHHHHHHC---C----------------CGGGG---CH----------HHHHTTCC-
T ss_pred -hh-------------------HHHHHHhcCCchh----------------hhhhc---CH----------HHHHHhccc
Confidence 10 0011111111100 00000 00 011122345
Q ss_pred ccccEEEEecCCCcch--hh--hHHHhhhcc--ccCceEEEEcCchhhhH--hHHHHHHHHhhhh
Q 022316 241 LQCRSLIFVGESSPFH--SE--AVHMTSKID--RRYSALVEVWTRVYISL--LGFLVLLASFCES 297 (299)
Q Consensus 241 i~~P~lii~G~~D~~~--~~--~~~~~~~~~--~~~~~~~~~~~~~H~~~--~~f~~~~~~~~~~ 297 (299)
+++|+++++|++|.++ .. ++.+.+.+. +..++++++|+++|... ..|+...-.|+.+
T Consensus 214 ~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~ 278 (282)
T 3fcx_A 214 SQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEDYDHSYYFIATFITDHIRHHAK 278 (282)
T ss_dssp --CCEEEEEETTCHHHHTTSSCHHHHHHHHHHTTCCEEEEEETTCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEcCCCCcccccchhhHHHHHHHHHHcCCceEEEECCCCCcCHHHHHhhhHHHHHHHHH
Confidence 6899999999999987 22 224444332 33478999999999642 3455555555544
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-17 Score=136.41 Aligned_cols=190 Identities=9% Similarity=0.071 Sum_probs=128.0
Q ss_pred CceEEEEeccCC------CCCeEEEecccccchhhhccccccC------chhhhcccCceEEEEECCCCCCCCCCCCC--
Q 022316 29 HGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFC------PEACSLLLHNFCIYHINPPGHEFGAAAIS-- 94 (299)
Q Consensus 29 ~~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~~w~------~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-- 94 (299)
+..+.+..+.+. +.|+||++||.+.++.......+.. .........++.|+++|.||.+.......
T Consensus 155 g~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~~~~~~ 234 (380)
T 3doh_A 155 GVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTDR 234 (380)
T ss_dssp CCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBTTTTCS
T ss_pred CcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCccccccccc
Confidence 457888877543 2378999999987643311110000 00011224578999999998764321111
Q ss_pred --CCCCcccHHHHHHHHHHHHHhcCCC--cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhh
Q 022316 95 --DDEPVLSVDDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (299)
Q Consensus 95 --~~~~~~~~~~~~~~l~~~l~~l~~~--~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (299)
........+++.+.+..+++..+++ ++.|+||||||.+++.++.++|+++++++++++..
T Consensus 235 ~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~---------------- 298 (380)
T 3doh_A 235 ENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGG---------------- 298 (380)
T ss_dssp SCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC----------------
T ss_pred ccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCC----------------
Confidence 1112356777888888888887764 79999999999999999999999999999999864
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccc-ccEEEEe
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ-CRSLIFV 249 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~lii~ 249 (299)
. + ..+..++ +|+|+++
T Consensus 299 ----------------------~---------~--------------------------------~~~~~~~~~P~lii~ 315 (380)
T 3doh_A 299 ----------------------D---------V--------------------------------SKVERIKDIPIWVFH 315 (380)
T ss_dssp ----------------------C---------G--------------------------------GGGGGGTTSCEEEEE
T ss_pred ----------------------C---------h--------------------------------hhhhhccCCCEEEEe
Confidence 0 0 0112233 7999999
Q ss_pred cCCCcch--hhhHHHhhhcc--ccCceEEEEcCc--------hhhhHhHHHH--HHHHhhhh
Q 022316 250 GESSPFH--SEAVHMTSKID--RRYSALVEVWTR--------VYISLLGFLV--LLASFCES 297 (299)
Q Consensus 250 G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~--------~H~~~~~f~~--~~~~~~~~ 297 (299)
|++|..+ +.++.+.+.+. +..++++++|++ +|....+... .+..|+.+
T Consensus 316 G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~~~~~~~~i~~wL~~ 377 (380)
T 3doh_A 316 AEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWIPTYENQEAIEWLFE 377 (380)
T ss_dssp ETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHHHHHTCHHHHHHHHT
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHHHhcCCHHHHHHHHh
Confidence 9999997 66677776663 234789999999 8876555555 56666654
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=132.07 Aligned_cols=214 Identities=12% Similarity=0.103 Sum_probs=127.5
Q ss_pred CCceEEEEeccCC------CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCC-----
Q 022316 28 SHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISD----- 95 (299)
Q Consensus 28 ~~~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~----- 95 (299)
.+..+.+..+-++ ..|+||++||++.+........ .+...+ ..|+.|+++|.+++|.+......
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~----~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~ 100 (280)
T 3ls2_A 25 THCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKA----GAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQ 100 (280)
T ss_dssp TTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHS----CCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSST
T ss_pred cCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcch----hHHHHHhhCCeEEEEeCCccccccccccccccccc
Confidence 3446766666442 3479999999988765421111 112333 34999999999987755321100
Q ss_pred ------------CCCccc-HHHHHHHHHHHHHhc-CC-CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh
Q 022316 96 ------------DEPVLS-VDDLADQIAEVLNHF-GL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (299)
Q Consensus 96 ------------~~~~~~-~~~~~~~l~~~l~~l-~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (299)
...... .+.+.+++..+++.. .. ++++|+||||||.+|+.+|.++|+++++++++++........
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~ 180 (280)
T 3ls2_A 101 GAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCP 180 (280)
T ss_dssp TCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSH
T ss_pred CCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCc
Confidence 000112 344456666666543 33 789999999999999999999999999999999866532211
Q ss_pred HHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcc
Q 022316 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240 (299)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (299)
+. ...+..+++... .. +.. .+....+.+
T Consensus 181 -~~-------------------~~~~~~~~g~~~--------~~--------~~~----------------~~~~~~~~~ 208 (280)
T 3ls2_A 181 -WG-------------------VKAFTGYLGADK--------TT--------WAQ----------------YDSCKLMAK 208 (280)
T ss_dssp -HH-------------------HHHHHHHHCSCG--------GG--------TGG----------------GCHHHHHHT
T ss_pred -ch-------------------hhHHHhhcCchH--------HH--------HHh----------------cCHHHHHHh
Confidence 00 001111222110 00 000 011111112
Q ss_pred ----ccccEEEEecCCCcchhh---hHHHhhhcc--ccCceEEEEcCchhhhH--hHHHHHHHHhhhh
Q 022316 241 ----LQCRSLIFVGESSPFHSE---AVHMTSKID--RRYSALVEVWTRVYISL--LGFLVLLASFCES 297 (299)
Q Consensus 241 ----i~~P~lii~G~~D~~~~~---~~~~~~~~~--~~~~~~~~~~~~~H~~~--~~f~~~~~~~~~~ 297 (299)
+.+|+++++|++|.++.. ++.+.+.+. +..++++++|+++|... .+++...-.|+++
T Consensus 209 ~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~ 276 (280)
T 3ls2_A 209 AEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGYDHSYFFISSFIDQHLVFHHQ 276 (280)
T ss_dssp CCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTCCSSHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCCCceEEEeCCCCCchhhHHHHHHHHHHHHHH
Confidence 367999999999999843 566665553 33478999999999643 3566666566654
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=134.51 Aligned_cols=194 Identities=12% Similarity=0.052 Sum_probs=118.9
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCC---------------------CCCCCCCCC--CCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPP---------------------GHEFGAAAI--SDD 96 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~---------------------G~G~S~~~~--~~~ 96 (299)
..|+|||+||++.+........ ..+.+.+.+ ||+|+++|+| |+|.+..-. ...
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~---~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~ 80 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKS---SGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEI 80 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHT---HHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSS
T ss_pred cCceEEEeCCCCccHHHHHHHH---HHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCC
Confidence 4688999999999885511100 122444444 9999999999 445442110 000
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC------cccEEEEecCCCCCcchhHHHHhhhhhh
Q 022316 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH------RVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (299)
....++.+.++.+.+.++..+ +++.|+||||||.+|+.+|.+++. .++.++++++........
T Consensus 81 ~~~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~---------- 149 (243)
T 1ycd_A 81 SHELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP---------- 149 (243)
T ss_dssp GGGCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT----------
T ss_pred cchhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc----------
Confidence 112466777777777776554 679999999999999999987642 466677666543211000
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEec
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 250 (299)
...+. . .. ..+ + . +....+.++++|+++++|
T Consensus 150 --~~~~~------------~--~~-------~~~----------------~-------~---~~~~~~~~~~~P~l~i~G 180 (243)
T 1ycd_A 150 --EHPGE------------L--RI-------TEK----------------F-------R---DSFAVKPDMKTKMIFIYG 180 (243)
T ss_dssp --TSTTC------------E--EE-------CGG----------------G-------T---TTTCCCTTCCCEEEEEEE
T ss_pred --ccccc------------c--cc-------chh----------------H-------H---HhccCcccCCCCEEEEEe
Confidence 00000 0 00 000 0 0 001124568999999999
Q ss_pred CCCcch--hhhHHHhhhcccc-----CceEEEEcCchhhhHh--HHHHHHHHhhhh
Q 022316 251 ESSPFH--SEAVHMTSKIDRR-----YSALVEVWTRVYISLL--GFLVLLASFCES 297 (299)
Q Consensus 251 ~~D~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~H~~~~--~f~~~~~~~~~~ 297 (299)
++|.++ +.++.+.+.++.. ....+.++++||.... ++.+.+..|+++
T Consensus 181 ~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~~~~~~~i~~fl~~ 236 (243)
T 1ycd_A 181 ASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNKKDIIRPIVEQITS 236 (243)
T ss_dssp TTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCCHHHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCchHHHHHHHHHHHHH
Confidence 999998 5566777766542 1355677889998654 377888888764
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-17 Score=148.04 Aligned_cols=230 Identities=11% Similarity=0.013 Sum_probs=135.7
Q ss_pred cceeecCC-ceEEEEeccC------CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC-
Q 022316 22 DNLIKTSH-GSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI- 93 (299)
Q Consensus 22 ~~~i~~~~-~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~- 93 (299)
...++..+ .+|.+...-+ ++.|+||++||.+..... ..|......++..||.|+++|+||+|.+....
T Consensus 482 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~ 557 (751)
T 2xe4_A 482 RRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMD----PQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWY 557 (751)
T ss_dssp EEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCC----CCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHH
T ss_pred EEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCC----CcchHHHHHHHhCCcEEEEEeeCCCCCcCcchh
Confidence 33455544 4676544321 346899999997655432 12434444556779999999999998753211
Q ss_pred ---C-CCCCcccHHHHHHHHHHHHHh--cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhh
Q 022316 94 ---S-DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (299)
Q Consensus 94 ---~-~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (299)
. ......+++|+.+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+.++....... .
T Consensus 558 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~---~---- 630 (751)
T 2xe4_A 558 EIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTT---M---- 630 (751)
T ss_dssp HTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHH---H----
T ss_pred hccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhh---h----
Confidence 0 001225678888887777776 34478999999999999999999999999999999886432110 0
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccccc-EE
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR-SL 246 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l 246 (299)
...... .. ...+ ... .. + .+++..+.+.. .+....+.++++| +|
T Consensus 631 -----~~~~~~-~~----~~~~--~~~-g~-p-~~~~~~~~~~~--------------------~sp~~~~~~~~~Pp~L 675 (751)
T 2xe4_A 631 -----CDPSIP-LT----TGEW--EEW-GN-P-NEYKYYDYMLS--------------------YSPMDNVRAQEYPNIM 675 (751)
T ss_dssp -----TCTTST-TH----HHHT--TTT-CC-T-TSHHHHHHHHH--------------------HCTGGGCCSSCCCEEE
T ss_pred -----cccCcc-cc----hhhH--HHc-CC-C-CCHHHHHHHHh--------------------cChhhhhccCCCCcee
Confidence 000000 00 0001 000 00 0 01211111111 1122345568897 99
Q ss_pred EEecCCCcch--hhhHHHhhhcccc-----CceEEEEcCchhhhHh------HHHHHHHHhhhh
Q 022316 247 IFVGESSPFH--SEAVHMTSKIDRR-----YSALVEVWTRVYISLL------GFLVLLASFCES 297 (299)
Q Consensus 247 ii~G~~D~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~H~~~~------~f~~~~~~~~~~ 297 (299)
+++|++|..+ ..+.++.+.+... ...+.+++++||.... +..+.+.+|+.+
T Consensus 676 ii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~ 739 (751)
T 2xe4_A 676 VQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCK 739 (751)
T ss_dssp EEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHH
Confidence 9999999987 6677777666421 2345556999997542 233445566654
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-18 Score=135.43 Aligned_cols=106 Identities=13% Similarity=0.159 Sum_probs=83.4
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
.++++|||+||++.+... . |...+.+.| ..||+|+++|+||||.++. ..+.+++++.+..+++..+.
T Consensus 63 ~~~~pVVLvHG~~~~~~~----~-w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~-------~~~~~~la~~I~~l~~~~g~ 130 (316)
T 3icv_A 63 SVSKPILLVPGTGTTGPQ----S-FDSNWIPLSAQLGYTPCWISPPPFMLNDT-------QVNTEYMVNAITTLYAGSGN 130 (316)
T ss_dssp BCSSEEEEECCTTCCHHH----H-HTTTHHHHHHHTTCEEEEECCTTTTCSCH-------HHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEEECCCCCCcHH----H-HHHHHHHHHHHCCCeEEEecCCCCCCCcH-------HHHHHHHHHHHHHHHHHhCC
Confidence 356789999999888632 1 541334444 4599999999999997631 24567888888889999999
Q ss_pred CcEEEEeeCccHHHHHHHHHHc---cCcccEEEEecCCCCCc
Q 022316 119 GAVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKAP 157 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~---p~~v~~lvl~~~~~~~~ 157 (299)
++++||||||||.++..++..+ +++|+++|+++++....
T Consensus 131 ~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~Gt 172 (316)
T 3icv_A 131 NKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 172 (316)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCB
T ss_pred CceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCCc
Confidence 9999999999999997777665 58999999999977654
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.76 E-value=5.7e-18 Score=135.54 Aligned_cols=116 Identities=12% Similarity=0.072 Sum_probs=92.6
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (299)
+++++|||+||++.+........+|......+..+||+|+++|+||+|.|..+ ..+.+++++++.++++.++.+
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~------~~~~~~l~~~i~~~l~~~~~~ 79 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP------NGRGEQLLAYVKTVLAATGAT 79 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST------TSHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC------CCCHHHHHHHHHHHHHHhCCC
Confidence 35788999999987763211102365554444456999999999999988431 368899999999999999999
Q ss_pred cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH
Q 022316 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (299)
+++|+||||||.++..++.++|++|+++|+++++........
T Consensus 80 ~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~~G~~~ad 121 (320)
T 1ys1_X 80 KVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGSEFAD 121 (320)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHH
T ss_pred CEEEEEECHhHHHHHHHHHhChhhceEEEEECCCCCCccHHH
Confidence 999999999999999999999999999999998766554443
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=131.87 Aligned_cols=120 Identities=13% Similarity=0.108 Sum_probs=81.3
Q ss_pred cCCceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCC------------CC--C
Q 022316 27 TSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPP------------GH--E 87 (299)
Q Consensus 27 ~~~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~------------G~--G 87 (299)
.++.++.+..+-+ +..|+||++||++.+... |...+...+ ..||.|+++|+| |+ |
T Consensus 35 ~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~------~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g 108 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGAD------YRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFT 108 (304)
T ss_dssp CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHH------HHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBC
T ss_pred CCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHH------HHHHHHHHHHHCCcEEEEeCCccccCCCccccccCcccc
Confidence 4555676664432 346899999999988744 212223434 459999999999 55 6
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHHHHHhc--CCCcEEEEeeCccHHHHHHHHHHccC-cccEEEEecCCC
Q 022316 88 FGAAAISDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLC 154 (299)
Q Consensus 88 ~S~~~~~~~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~~ 154 (299)
.|..+.+ .....++++.+.+..+.+.. ..++++|+||||||.+++.+|.++|+ +++++|+.+++.
T Consensus 109 ~s~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 109 AAGNPRH--VDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW 176 (304)
T ss_dssp TTSCBCC--GGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred ccCCCCc--ccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence 6643211 11234455545555554443 35799999999999999999999995 799999887544
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.76 E-value=4.1e-18 Score=134.77 Aligned_cols=112 Identities=13% Similarity=0.052 Sum_probs=90.3
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (299)
+++|+|||+||++.+...... .+|......+...||+|+++|+||+|.|. .+.+++++++.++++.++.+
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~-~~~~~~~~~L~~~G~~v~~~d~~g~g~s~---------~~~~~~~~~i~~~~~~~~~~ 74 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGV-DYWFGIPSALRRDGAQVYVTEVSQLDTSE---------VRGEQLLQQVEEIVALSGQP 74 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTE-ESSTTHHHHHHHTTCCEEEECCCSSSCHH---------HHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCeEEEeCCCCCCcccccc-ccHHHHHHHHHhCCCEEEEEeCCCCCCch---------hhHHHHHHHHHHHHHHhCCC
Confidence 357889999999876531111 23655544444568999999999999772 67899999999999999989
Q ss_pred cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH
Q 022316 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (299)
+++|+||||||.++..++.++|++|+++|+++++........
T Consensus 75 ~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~g~~~a~ 116 (285)
T 1ex9_A 75 KVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTAD 116 (285)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHH
T ss_pred CEEEEEECHhHHHHHHHHHhChhheeEEEEECCCCCCchHHH
Confidence 999999999999999999999999999999998765544333
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.9e-17 Score=140.89 Aligned_cols=227 Identities=10% Similarity=-0.031 Sum_probs=136.6
Q ss_pred cceeecCC-ceEEEEeccC------CCCCeEEEecccccchhhhccccccCchhh-hcccCceEEEEECCCCCCCCCCCC
Q 022316 22 DNLIKTSH-GSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEAC-SLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 22 ~~~i~~~~-~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~-~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
...++..+ .+|++..+.+ ++.|+||++||.+...... . |..... .++.+||.|+.+|+||+|.+....
T Consensus 451 ~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~---~-~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~ 526 (711)
T 4hvt_A 451 QKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAP---Y-FSRIKNEVWVKNAGVSVLANIRGGGEFGPEW 526 (711)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCC---C-CCHHHHHHTGGGTCEEEEECCTTSSTTCHHH
T ss_pred EEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCC---c-ccHHHHHHHHHCCCEEEEEeCCCCCCcchhH
Confidence 33455544 4676655432 3568999999986554331 1 222322 556779999999999998653210
Q ss_pred ----CCCCCcccHHHHHHHHHHHHHhcC--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhh
Q 022316 94 ----SDDEPVLSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (299)
Q Consensus 94 ----~~~~~~~~~~~~~~~l~~~l~~l~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (299)
........++|+.+.+..+++.-. .+++.++|+|+||.+++.++.++|++++++|..++..........
T Consensus 527 ~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~----- 601 (711)
T 4hvt_A 527 HKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEF----- 601 (711)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS-----
T ss_pred HHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhcc-----
Confidence 111122455666666666665522 268999999999999999999999999999999887654321100
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccc--cE
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC--RS 245 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--P~ 245 (299)
..+ .... .. ++... .++..+.+.. .+....+.++++ |+
T Consensus 602 ------~~~-~~~~-----~~-~G~p~-------~~~~~~~l~~--------------------~SP~~~v~~i~~~pPv 641 (711)
T 4hvt_A 602 ------GAG-HSWV-----TE-YGDPE-------IPNDLLHIKK--------------------YAPLENLSLTQKYPTV 641 (711)
T ss_dssp ------TTG-GGGH-----HH-HCCTT-------SHHHHHHHHH--------------------HCGGGSCCTTSCCCEE
T ss_pred ------ccc-hHHH-----HH-hCCCc-------CHHHHHHHHH--------------------cCHHHHHhhcCCCCCE
Confidence 000 0000 00 11100 1222221111 122233556776 99
Q ss_pred EEEecCCCcch--hhhHHHhhhc-c--ccCceEEEEcCchhhhH------hHHHHHHHHhhhh
Q 022316 246 LIFVGESSPFH--SEAVHMTSKI-D--RRYSALVEVWTRVYISL------LGFLVLLASFCES 297 (299)
Q Consensus 246 lii~G~~D~~~--~~~~~~~~~~-~--~~~~~~~~~~~~~H~~~------~~f~~~~~~~~~~ 297 (299)
|+++|++|..+ ..+.++.+.+ . +..+.++++|++||... .+..+.+.+|+.+
T Consensus 642 Lii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~ 704 (711)
T 4hvt_A 642 LITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFAN 704 (711)
T ss_dssp EEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHH
Confidence 99999999997 6666676666 2 23478999999999642 2344444566654
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.5e-17 Score=127.77 Aligned_cols=214 Identities=10% Similarity=0.062 Sum_probs=126.7
Q ss_pred CceEEEEeccCC-----CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCC----------
Q 022316 29 HGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAA---------- 92 (299)
Q Consensus 29 ~~~l~~~~~g~~-----~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~---------- 92 (299)
+..+.+..+-++ +.|+||++||.+.+....... ..+...+ ..|+.|+++|.+++|.+...
T Consensus 33 ~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~----~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~ 108 (283)
T 4b6g_A 33 QCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFITK----SGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSA 108 (283)
T ss_dssp TEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHHH----SCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTB
T ss_pred CCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhhc----ccHHHHHhhCCeEEEEeccccccccccccccccccCCC
Confidence 446666665432 347899999998776542110 1112333 34899999998744432111
Q ss_pred -----CC--CCCCccc-HHHHHHHHHHHHHhc--CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHH
Q 022316 93 -----IS--DDEPVLS-VDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW 162 (299)
Q Consensus 93 -----~~--~~~~~~~-~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 162 (299)
.+ +...... .+.+++++..+++.. ..++++|+||||||.+|+.+|.++|+++++++++++........ +
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~-~ 187 (283)
T 4b6g_A 109 GFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLVP-W 187 (283)
T ss_dssp CTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGSH-H
T ss_pred cccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccCc-c
Confidence 00 0001112 344466777777665 23789999999999999999999999999999999866532110 0
Q ss_pred HHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcc--
Q 022316 163 LYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK-- 240 (299)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (299)
. ...+..+++... .. +.. .+....+.+
T Consensus 188 ~-------------------~~~~~~~~g~~~--------~~--------~~~----------------~~~~~~~~~~~ 216 (283)
T 4b6g_A 188 G-------------------EKAFTAYLGKDR--------EK--------WQQ----------------YDANSLIQQGY 216 (283)
T ss_dssp H-------------------HHHHHHHHCSCG--------GG--------GGG----------------GCHHHHHHHTC
T ss_pred h-------------------hhhHHhhcCCch--------HH--------HHh----------------cCHHHHHHhcc
Confidence 0 001111222110 00 000 011111111
Q ss_pred ccccEEEEecCCCcchhh---hHHHhhhcc--ccCceEEEEcCchhhh--HhHHHHHHHHhhhhc
Q 022316 241 LQCRSLIFVGESSPFHSE---AVHMTSKID--RRYSALVEVWTRVYIS--LLGFLVLLASFCESE 298 (299)
Q Consensus 241 i~~P~lii~G~~D~~~~~---~~~~~~~~~--~~~~~~~~~~~~~H~~--~~~f~~~~~~~~~~~ 298 (299)
...|+++++|+.|.++.. ++.+.+.+. +..++++++|+++|.. +.+++...-.|+.+.
T Consensus 217 ~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~l~~~l~~~~~~ 281 (283)
T 4b6g_A 217 KVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAF 281 (283)
T ss_dssp CCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSSHHHHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcCHhHHHHHHHHHHHHHHHh
Confidence 345999999999999843 566655542 3348999999999964 346666666776653
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=3e-16 Score=128.26 Aligned_cols=116 Identities=8% Similarity=-0.101 Sum_probs=75.4
Q ss_pred CCCeEEEecccccchhhhccccc-c--Cchhhhcc-cCceEEEEECCCCCCCCCCCCCCCC----CcccHHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLF-F--CPEACSLL-LHNFCIYHINPPGHEFGAAAISDDE----PVLSVDDLADQIAEV 112 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~-w--~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~----~~~~~~~~~~~l~~~ 112 (299)
..|+|++.||... ...|..+.. + ......++ .+||.|+++|+||+|.|........ ....+.|.++.+..+
T Consensus 73 ~~PvV~~~HG~~~-~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~ 151 (377)
T 4ezi_A 73 QVGIISYQHGTRF-ERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKEL 151 (377)
T ss_dssp CEEEEEEECCCCC-STTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcC-CcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHH
Confidence 4578999999984 333321110 0 01223345 7899999999999998864111100 012233444455556
Q ss_pred HHhcCC---CcEEEEeeCccHHHHHHHHHHccC-----cccEEEEecCCCCCc
Q 022316 113 LNHFGL---GAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKAP 157 (299)
Q Consensus 113 l~~l~~---~~~~lvG~S~Gg~va~~~a~~~p~-----~v~~lvl~~~~~~~~ 157 (299)
++.+++ ++++++||||||.+++.+|..+|+ .+.+.+..+++....
T Consensus 152 ~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~ 204 (377)
T 4ezi_A 152 ANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWE 204 (377)
T ss_dssp HHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHH
T ss_pred hhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHH
Confidence 666665 689999999999999999988765 478888888776543
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-18 Score=146.05 Aligned_cols=106 Identities=9% Similarity=0.034 Sum_probs=85.0
Q ss_pred CCCCeEEEecccccch-hhhccccccCchh-hhcccC-ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc
Q 022316 40 QDKPALVTYPDLALNY-MSCFQGLFFCPEA-CSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF 116 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~-~~~~~~~~w~~~~-~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l 116 (299)
+++|++|++||++.++ .. |...+ ..++.. +|+|+++|+||+|.|..+ ....+++++++++.++++.+
T Consensus 68 ~~~p~vvliHG~~~~~~~~------w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~----~~~~~~~~~~~dl~~li~~L 137 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDG------WLLDMCKKMFQVEKVNCICVDWRRGSRTEYT----QASYNTRVVGAEIAFLVQVL 137 (452)
T ss_dssp TTSEEEEEECCSCCTTCTT------HHHHHHHHHHTTCCEEEEEEECHHHHSSCHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCch------HHHHHHHHHHhhCCCEEEEEechhcccCchh----HhHhhHHHHHHHHHHHHHHH
Confidence 4578999999999876 22 54433 344443 999999999999988521 12356778889999998887
Q ss_pred ----CC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 117 ----GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 117 ----~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
++ ++++|+||||||.+|+.+|.++|++|+++|+++|+..
T Consensus 138 ~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 138 STEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp HHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 54 8999999999999999999999999999999998754
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.73 E-value=4.4e-18 Score=136.63 Aligned_cols=117 Identities=12% Similarity=-0.008 Sum_probs=89.9
Q ss_pred CCCeEEEecccccchhhhc----ccccc----CchhhhcccCceE---EEEECCCCCCCCCCCCCCCCCcccHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCF----QGLFF----CPEACSLLLHNFC---IYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~----~~~~w----~~~~~~~l~~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 109 (299)
++++|||+||++.+..... ....| ...+..+...||+ |+++|+||+|.|..+.......+..+++++++
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~I 118 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTFI 118 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHHH
Confidence 5678999999998653100 11225 5555555566998 99999999998753211112346788889999
Q ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHc--cCcccEEEEecCCCCCc
Q 022316 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKAP 157 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~~~~~ 157 (299)
..+++.++.++++||||||||.++..++.++ |++|+++|+++++....
T Consensus 119 ~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~G~ 168 (342)
T 2x5x_A 119 DKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRGL 168 (342)
T ss_dssp HHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTTCC
T ss_pred HHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcccc
Confidence 9999999999999999999999999999998 99999999999876553
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-18 Score=145.86 Aligned_cols=107 Identities=9% Similarity=0.026 Sum_probs=84.6
Q ss_pred CCCCeEEEecccccchhhhccccccCchh-hhcccC-ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc-
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~-~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l- 116 (299)
+++|++|++||++.++.. . |...+ ..++.. +|+|+++|+||+|.|..+ ....+++++++++.++++.+
T Consensus 68 ~~~p~vvliHG~~~~~~~----~-w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~----~~~~~~~~~~~dl~~~i~~L~ 138 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGED----S-WPSDMCKKILQVETTNCISVDWSSGAKAEYT----QAVQNIRIVGAETAYLIQQLL 138 (452)
T ss_dssp TTSCEEEEECCTTCCSSS----S-HHHHHHHHHHTTSCCEEEEEECHHHHTSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCCCc----h-HHHHHHHHHHhhCCCEEEEEecccccccccH----HHHHhHHHHHHHHHHHHHHHH
Confidence 457899999999887621 1 53423 334443 999999999999988521 12356778888999888877
Q ss_pred ---C--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 117 ---G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 117 ---~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
+ .++++|+||||||.+|..+|.++|++|+++|+++|+..
T Consensus 139 ~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 139 TELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 5 68999999999999999999999999999999998653
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-18 Score=143.93 Aligned_cols=107 Identities=8% Similarity=0.030 Sum_probs=83.3
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcc--cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc-
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL--LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l--~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l- 116 (299)
+++|++||+||++.++.. . |...+...+ ..+|+|+++|+||||.|..+ ...++++.+++++.++++.+
T Consensus 67 ~~~p~vvliHG~~~s~~~----~-w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~----~~~~~~~~v~~~la~ll~~L~ 137 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEE----S-WLSTMCQNMFKVESVNCICVDWKSGSRTAYS----QASQNVRIVGAEVAYLVGVLQ 137 (449)
T ss_dssp TTSEEEEEECCCCCTTCT----T-HHHHHHHHHHHHCCEEEEEEECHHHHSSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCCCCCc----c-HHHHHHHHHHhcCCeEEEEEeCCcccCCccH----HHHHHHHHHHHHHHHHHHHHH
Confidence 356889999999887521 1 544344443 46899999999999987421 11356777888888888766
Q ss_pred -----CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 117 -----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 117 -----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
+.++++|+||||||.+|..+|.++|++|.++++++|+..
T Consensus 138 ~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 138 SSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 468999999999999999999999999999999998754
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=124.42 Aligned_cols=186 Identities=15% Similarity=0.112 Sum_probs=116.2
Q ss_pred EEEEeccC---CCCCeEEEecccccchhhhccccccCchhhhcc--cCceEEEEECCC------CCCCCCCCCC---CCC
Q 022316 32 LSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL--LHNFCIYHINPP------GHEFGAAAIS---DDE 97 (299)
Q Consensus 32 l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l--~~~~~vi~~D~~------G~G~S~~~~~---~~~ 97 (299)
+.|...+. +..|.|||+||+|.++.. |......+. ..++.+++++-| |.|.+=.+.. ...
T Consensus 53 l~y~~~p~~~~~~~plVI~LHG~G~~~~~------~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~ 126 (285)
T 4fhz_A 53 LTFGRRGAAPGEATSLVVFLHGYGADGAD------LLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSS 126 (285)
T ss_dssp CCEEEEESCTTCCSEEEEEECCTTBCHHH------HHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCC
T ss_pred ceeecCCCCCCCCCcEEEEEcCCCCCHHH------HHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcc
Confidence 45555443 245689999999988765 212211221 247889998754 3332200000 000
Q ss_pred Ccc---cHHHHHHHHHHHH----HhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhh
Q 022316 98 PVL---SVDDLADQIAEVL----NHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (299)
Q Consensus 98 ~~~---~~~~~~~~l~~~l----~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (299)
... .+.+.++++.+++ +..++ ++++|+|+|+||.+++.++.++|+++.++|.+++....+.
T Consensus 127 ~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~---------- 196 (285)
T 4fhz_A 127 ETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPE---------- 196 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHH----------
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCch----------
Confidence 001 1222233444443 34455 6899999999999999999999999999998876321100
Q ss_pred hhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEE
Q 022316 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (299)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 248 (299)
.. . . ....+.|++++
T Consensus 197 -----------~~---------------------~-------~--------------------------~~~~~~Pvl~~ 211 (285)
T 4fhz_A 197 -----------RL---------------------A-------E--------------------------EARSKPPVLLV 211 (285)
T ss_dssp -----------HH---------------------H-------H--------------------------HCCCCCCEEEE
T ss_pred -----------hh---------------------h-------h--------------------------hhhhcCcccce
Confidence 00 0 0 01234699999
Q ss_pred ecCCCcch--hhhHHHhhhcc--ccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 249 VGESSPFH--SEAVHMTSKID--RRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 249 ~G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+|++|.++ +..+++.+.+. +..++++++++.||.+-.+-++.+.+|+++.
T Consensus 212 hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~~~~l~~~~~fL~~~ 265 (285)
T 4fhz_A 212 HGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIAPDGLSVALAFLKER 265 (285)
T ss_dssp EETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred eeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 99999998 55666555542 2347899999999998888888888888763
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=4.1e-16 Score=122.54 Aligned_cols=195 Identities=10% Similarity=-0.002 Sum_probs=116.6
Q ss_pred CceEEEEeccC------CCCCeEEEecccccchhhhccc-cccCchhhhccc----CceEEEEECCCCCCCCCCCCCCCC
Q 022316 29 HGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQG-LFFCPEACSLLL----HNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 29 ~~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~-~~w~~~~~~~l~----~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
+..+.+..+-+ .+.|+||++||.+.+....... ..+...+..+.. .++.|+++|.+++|.+... .
T Consensus 43 ~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~----~ 118 (268)
T 1jjf_A 43 NSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIAD----G 118 (268)
T ss_dssp TEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSC----H
T ss_pred CCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccc----c
Confidence 34566665533 2457999999998775431111 001001222333 3699999999998754210 0
Q ss_pred CcccHHHHHHHHHHHHH-hcCC----CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 98 PVLSVDDLADQIAEVLN-HFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~-~l~~----~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
.....+++++++..+++ .++. +++.|+||||||.+++.++.++|+++++++++++........
T Consensus 119 ~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~------------ 186 (268)
T 1jjf_A 119 YENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNE------------ 186 (268)
T ss_dssp HHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHH------------
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCchh------------
Confidence 00112333555555554 3443 689999999999999999999999999999999854322100
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccccc-EEEEecC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR-SLIFVGE 251 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~G~ 251 (299)
..+... .. ....++| +++++|+
T Consensus 187 ---------------~~~~~~---------~~---------------------------------~~~~~~pp~li~~G~ 209 (268)
T 1jjf_A 187 ---------------RLFPDG---------GK---------------------------------AAREKLKLLFIACGT 209 (268)
T ss_dssp ---------------HHCTTT---------TH---------------------------------HHHHHCSEEEEEEET
T ss_pred ---------------hhcCcc---------hh---------------------------------hhhhcCceEEEEecC
Confidence 001000 00 0112344 9999999
Q ss_pred CCcchhhhHHHhhhcc--ccCceEEEEcCchhhhH--hHHHHHHHHhhh
Q 022316 252 SSPFHSEAVHMTSKID--RRYSALVEVWTRVYISL--LGFLVLLASFCE 296 (299)
Q Consensus 252 ~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~--~~f~~~~~~~~~ 296 (299)
+|.++...+.+.+.+. +..++++++|+.+|... .+.+..+..|+.
T Consensus 210 ~D~~v~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~l~ 258 (268)
T 1jjf_A 210 NDSLIGFGQRVHEYCVANNINHVYWLIQGGGHDFNVWKPGLWNFLQMAD 258 (268)
T ss_dssp TCTTHHHHHHHHHHHHHTTCCCEEEEETTCCSSHHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHCCCceEEEEcCCCCcCHhHHHHHHHHHHHHHH
Confidence 9999854555555442 23478999999999752 233344444443
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.71 E-value=5.1e-17 Score=144.35 Aligned_cols=215 Identities=10% Similarity=0.028 Sum_probs=116.9
Q ss_pred hhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC--------------------CcEEEEeeCc
Q 022316 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL--------------------GAVMCMGVTA 128 (299)
Q Consensus 69 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~--------------------~~~~lvG~S~ 128 (299)
..++.+||.|+++|.||+|.|..... .... +.++|+.++++.+.. +++.++||||
T Consensus 275 ~~la~~GYaVv~~D~RG~G~S~G~~~----~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~Sy 349 (763)
T 1lns_A 275 DYFLTRGFASIYVAGVGTRSSDGFQT----SGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSY 349 (763)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCCC----TTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETH
T ss_pred HHHHHCCCEEEEECCCcCCCCCCcCC----CCCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECH
Confidence 34557799999999999999965321 2332 456777777777651 4899999999
Q ss_pred cHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHH
Q 022316 129 GAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQA 208 (299)
Q Consensus 129 Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (299)
||.+++.+|..+|++++++|..++.... ......... .....+.............+.............+....
T Consensus 350 GG~ial~~Aa~~p~~lkaiV~~~~~~d~---~~~~~~~g~--~~~~~g~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ 424 (763)
T 1lns_A 350 LGTMAYGAATTGVEGLELILAEAGISSW---YNYYRENGL--VRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEK 424 (763)
T ss_dssp HHHHHHHHHTTTCTTEEEEEEESCCSBH---HHHHBSSSS--BCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcccEEEEEecccccH---HHHhhhcch--hhhcccCCchhhhHHhHHHHhhhcCcchhhhHHHHHHH
Confidence 9999999999999999999999876421 110000000 00000000000000000011100000000000000000
Q ss_pred HHHhhhc-c--cccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhh
Q 022316 209 CRRLLDE-R--QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYIS 283 (299)
Q Consensus 209 ~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~ 283 (299)
....+.. . ....+..++. . .+....+++|++|+|+|+|.+|..+ ..+.++.+.++.+....+.+++++|..
T Consensus 425 ~~~~~~~~~~~~~~~~~~~w~---~-~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~i~~~gH~~ 500 (763)
T 1lns_A 425 RLAEMTAALDRKSGDYNQFWH---D-RNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIY 500 (763)
T ss_dssp HHHHHHHHHCTTTCCCCHHHH---T-TBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEESCSSCC
T ss_pred HHHHHHhhhhhccCchhHHhh---c-cChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEEEEeCCcccC
Confidence 0010100 0 0001111111 1 3455678899999999999999987 677788888763112345567889975
Q ss_pred Hh-----HHHHHHHHhhhh
Q 022316 284 LL-----GFLVLLASFCES 297 (299)
Q Consensus 284 ~~-----~f~~~~~~~~~~ 297 (299)
+. +|.+.+..|+.+
T Consensus 501 ~~~~~~~~~~~~i~~Ffd~ 519 (763)
T 1lns_A 501 MNSWQSIDFSETINAYFVA 519 (763)
T ss_dssp CTTBSSCCHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHH
Confidence 32 366666666553
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-17 Score=135.69 Aligned_cols=160 Identities=13% Similarity=0.107 Sum_probs=104.1
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC--------C---------Cc----
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD--------E---------PV---- 99 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~--------~---------~~---- 99 (299)
+.|+|||+||++.+... |...+..+.+.||.|+++|+||+|.|....... . ..
T Consensus 97 ~~P~Vv~~HG~~~~~~~------~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTL------YSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETH 170 (383)
T ss_dssp CEEEEEEECCTTCCTTT------THHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHH
T ss_pred CCCEEEEcCCCCCCchH------HHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchh
Confidence 45789999999877533 433434445669999999999998764210000 0 00
Q ss_pred ---ccHHHHHHHHHHHHHhc--------------------------CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEe
Q 022316 100 ---LSVDDLADQIAEVLNHF--------------------------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILV 150 (299)
Q Consensus 100 ---~~~~~~~~~l~~~l~~l--------------------------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~ 150 (299)
..++..++|+..+++.+ +.+++.++||||||.+++.++.+.+ +|+++|++
T Consensus 171 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~ 249 (383)
T 3d59_A 171 IRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIAL 249 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEe
Confidence 11222345555554432 2358999999999999999987765 69999999
Q ss_pred cCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcC
Q 022316 151 SPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING 230 (299)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (299)
++..... ..
T Consensus 250 ~~~~~p~--------------------------------------------~~--------------------------- 258 (383)
T 3d59_A 250 DAWMFPL--------------------------------------------GD--------------------------- 258 (383)
T ss_dssp SCCCTTC--------------------------------------------CG---------------------------
T ss_pred CCccCCC--------------------------------------------ch---------------------------
Confidence 8732100 00
Q ss_pred CCChhhhhccccccEEEEecCCCcchhhhHHHhhhc--cccCceEEEEcCchhhhH
Q 022316 231 RPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKI--DRRYSALVEVWTRVYISL 284 (299)
Q Consensus 231 ~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~~H~~~ 284 (299)
+.+.++++|+|+++|++|..++....+ +.+ .....+++++++++|..+
T Consensus 259 -----~~~~~i~~P~Lii~g~~D~~~~~~~~~-~~l~~~~~~~~~~~~~g~~H~~~ 308 (383)
T 3d59_A 259 -----EVYSRIPQPLFFINSEYFQYPANIIKM-KKCYSPDKERKMITIRGSVHQNF 308 (383)
T ss_dssp -----GGGGSCCSCEEEEEETTTCCHHHHHHH-HTTCCTTSCEEEEEETTCCGGGG
T ss_pred -----hhhccCCCCEEEEecccccchhhHHHH-HHHHhcCCceEEEEeCCCcCCCc
Confidence 012467889999999999876433333 222 224478999999999864
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5.2e-18 Score=141.11 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=83.1
Q ss_pred CCCCeEEEecccccchhhhccccccCchhh-hcccC-ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc-
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEAC-SLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~-~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l- 116 (299)
+++|++||+||++.++.. . |...+. .++.. +|+|+++|+||+|.|..+ ...++++.+++++.++++.+
T Consensus 68 ~~~p~vvliHG~~~s~~~----~-w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~----~~~~~~~~~a~~l~~ll~~L~ 138 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEE----N-WLLDMCKNMFKVEEVNCICVDWKKGSQTSYT----QAANNVRVVGAQVAQMLSMLS 138 (450)
T ss_dssp TTSEEEEEECCCCCTTCT----T-HHHHHHHHHTTTCCEEEEEEECHHHHSSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEccCCCCCCc----c-hHHHHHHHHHhcCCeEEEEEeCccccCCcch----HHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999887631 1 534333 34543 899999999999877321 12356788888998888876
Q ss_pred -----CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 117 -----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 117 -----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
+.++++||||||||.+|..+|.++|+ |.++++++|+..
T Consensus 139 ~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 139 ANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred HhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 46899999999999999999999999 999999998764
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-15 Score=117.51 Aligned_cols=190 Identities=10% Similarity=0.111 Sum_probs=118.2
Q ss_pred eEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhccc---CceEEEEECCCCC--------------CCCCC
Q 022316 31 SLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL---HNFCIYHINPPGH--------------EFGAA 91 (299)
Q Consensus 31 ~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~---~~~~vi~~D~~G~--------------G~S~~ 91 (299)
.+.|+...| +.+++|||+||+|.++.+ |.+. .+.+. .++++++++-|-. .....
T Consensus 24 ~l~y~ii~P~~~~~~~VI~LHG~G~~~~d------l~~l-~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~ 96 (246)
T 4f21_A 24 AMNYELMEPAKQARFCVIWLHGLGADGHD------FVDI-VNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSL 96 (246)
T ss_dssp CCCEEEECCSSCCCEEEEEEEC--CCCCC------GGGG-GGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC
T ss_pred CcCceEeCCCCcCCeEEEEEcCCCCCHHH------HHHH-HHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccc
Confidence 455666654 345689999999988755 2222 23332 4788999875421 11100
Q ss_pred CCCC---CCCcccHHHHHHHHHHHHH---hcC--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHH
Q 022316 92 AISD---DEPVLSVDDLADQIAEVLN---HFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163 (299)
Q Consensus 92 ~~~~---~~~~~~~~~~~~~l~~~l~---~l~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 163 (299)
.... ......+.+.++.+..+++ ..+ .++++++|+|+||++++.++.++|+++.+++.+++...... .
T Consensus 97 ~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~--~-- 172 (246)
T 4f21_A 97 DANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWD--N-- 172 (246)
T ss_dssp ---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHH--H--
T ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccc--c--
Confidence 0000 0011223444445555443 233 37899999999999999999999999999999987432110 0
Q ss_pred HhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccc
Q 022316 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 243 (299)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 243 (299)
+.... . -...++
T Consensus 173 --------------------------~~~~~-------------------------------------~-----~~~~~~ 184 (246)
T 4f21_A 173 --------------------------FKGKI-------------------------------------T-----SINKGL 184 (246)
T ss_dssp --------------------------HSTTC-------------------------------------C-----GGGTTC
T ss_pred --------------------------ccccc-------------------------------------c-----ccccCC
Confidence 00000 0 001246
Q ss_pred cEEEEecCCCcch--hhhHHHhhhcc--ccCceEEEEcCchhhhHhHHHHHHHHhhhhcC
Q 022316 244 RSLIFVGESSPFH--SEAVHMTSKID--RRYSALVEVWTRVYISLLGFLVLLASFCESEF 299 (299)
Q Consensus 244 P~lii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~~ 299 (299)
|+++++|++|+++ +.+++..+.+. +..+++.++|+.||..-.+-++.+..|+++.+
T Consensus 185 Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~~l~~~~~fL~k~l 244 (246)
T 4f21_A 185 PILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDISNFIAKTF 244 (246)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCCHHHHHHHHHHHHHHT
T ss_pred chhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccCHHHHHHHHHHHHHHh
Confidence 9999999999998 55555555542 23478899999999998888899999998764
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=8.7e-18 Score=139.09 Aligned_cols=114 Identities=17% Similarity=0.167 Sum_probs=84.9
Q ss_pred eccCCCCCeEEEecccccchhhhccccccCchhhhcccCce---EEEEECCCCCCCC-----CCCCCC------------
Q 022316 36 IYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF---CIYHINPPGHEFG-----AAAISD------------ 95 (299)
Q Consensus 36 ~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~---~vi~~D~~G~G~S-----~~~~~~------------ 95 (299)
..+++++++|||+||++.+... |...+..+..+|| +|+++|+||||.| +.....
T Consensus 16 ~~g~~~~ppVVLlHG~g~s~~~------w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~ 89 (484)
T 2zyr_A 16 VAAAEDFRPVVFVHGLAGSAGQ------FESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQI 89 (484)
T ss_dssp -----CCCCEEEECCTTCCGGG------GHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGG
T ss_pred ccCCCCCCEEEEECCCCCCHHH------HHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccc
Confidence 3454567899999999988754 6444444445689 7999999999976 110000
Q ss_pred ---------------CCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHcc---CcccEEEEecCCCC
Q 022316 96 ---------------DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCK 155 (299)
Q Consensus 96 ---------------~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~~~ 155 (299)
.....+.+++++++..+++.++.++++|+||||||.+++.++.++| ++|+++|+++++..
T Consensus 90 id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 90 IDPETLDKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp SCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccccccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0112456778888888999999999999999999999999999998 48999999998764
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.68 E-value=4.7e-15 Score=117.14 Aligned_cols=119 Identities=12% Similarity=0.049 Sum_probs=80.8
Q ss_pred CceEEEEeccCCCCCeEEEeccccc--chhhhccccccCc--hhhhcc-cCceEEEEECCCCCC-CCCCCCCCCCCcccH
Q 022316 29 HGSLSVTIYGDQDKPALVTYPDLAL--NYMSCFQGLFFCP--EACSLL-LHNFCIYHINPPGHE-FGAAAISDDEPVLSV 102 (299)
Q Consensus 29 ~~~l~~~~~g~~~~p~lvl~HG~~~--~~~~~~~~~~w~~--~~~~~l-~~~~~vi~~D~~G~G-~S~~~~~~~~~~~~~ 102 (299)
+..+.+. +-+++.|+|||+||++. +... |.. .+.+++ ..++.|+++|.++.+ .++...+ .. ..+
T Consensus 22 ~~~~~~~-~~P~~~p~vvllHG~~~~~~~~~------w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~--~~-~~~ 91 (280)
T 1r88_A 22 GRDIPVA-FLAGGPHAVYLLDAFNAGPDVSN------WVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQD--GS-KQW 91 (280)
T ss_dssp TEEEEEE-EECCSSSEEEEECCSSCCSSSCH------HHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSC--TT-CBH
T ss_pred CCcceEE-EeCCCCCEEEEECCCCCCCChhh------hhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCC--CC-CcH
Confidence 3455555 33333589999999953 3322 322 123434 358999999997642 2221111 11 234
Q ss_pred -HHHHHHHHHHHHh-cCCC--cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 103 -DDLADQIAEVLNH-FGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 103 -~~~~~~l~~~l~~-l~~~--~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
+.+++++..+++. ++++ +++|+||||||.+|+.+|.++|+++++++++++.....
T Consensus 92 ~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 150 (280)
T 1r88_A 92 DTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPS 150 (280)
T ss_dssp HHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcC
Confidence 4466788888877 7765 89999999999999999999999999999999876543
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-16 Score=136.41 Aligned_cols=122 Identities=11% Similarity=0.025 Sum_probs=84.6
Q ss_pred ceeecCCc-eEEEEeccCC---CCCeEEEecccccchhhhccccccCchh-hhcccCceEEEEECCCCCCCCCCCCCCCC
Q 022316 23 NLIKTSHG-SLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 23 ~~i~~~~~-~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~~~~~w~~~~-~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
..++..+| +|.+..+.+. ..|+||+.||.+.+.... .. |.... ..+...||.|+++|.||+|.|......
T Consensus 12 v~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~--~~-y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~-- 86 (587)
T 3i2k_A 12 VMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFA--WS-TQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP-- 86 (587)
T ss_dssp EEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCHHH--HH-TTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT--
T ss_pred EEEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCcccc--cc-chhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc--
Confidence 45666444 7877665432 347888888887764321 01 11122 455678999999999999999754321
Q ss_pred CcccHHHHHHHHHHHHHhcC-----CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCC
Q 022316 98 PVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~-----~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 153 (299)
+.+.++|+.++++.+. ..++.++|+||||.+++.+|.++|++++++|.+++.
T Consensus 87 ----~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 87 ----HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp ----TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred ----ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 1234555555554432 258999999999999999999999999999999887
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=3e-15 Score=118.36 Aligned_cols=121 Identities=10% Similarity=0.079 Sum_probs=82.0
Q ss_pred ceEEEEeccCCCCCeEEEeccccc--chhhhccccccCch--hhhcc-cCceEEEEECCCCCC-CCCCCCCCCC----Cc
Q 022316 30 GSLSVTIYGDQDKPALVTYPDLAL--NYMSCFQGLFFCPE--ACSLL-LHNFCIYHINPPGHE-FGAAAISDDE----PV 99 (299)
Q Consensus 30 ~~l~~~~~g~~~~p~lvl~HG~~~--~~~~~~~~~~w~~~--~~~~l-~~~~~vi~~D~~G~G-~S~~~~~~~~----~~ 99 (299)
..+.+...... +++|+|+||.+. +... |... +.+.+ ..++.|+++|.+|.+ .++...+... ..
T Consensus 18 ~~~~v~~~p~~-~~~v~llHG~~~~~~~~~------w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~ 90 (280)
T 1dqz_A 18 RDIKVQFQGGG-PHAVYLLDGLRAQDDYNG------WDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYT 90 (280)
T ss_dssp EEEEEEEECCS-SSEEEECCCTTCCSSSCH------HHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSC
T ss_pred ceeEEEEcCCC-CCEEEEECCCCCCCCccc------ccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCcccccccc
Confidence 35655554322 468999999963 4433 3221 11233 458999999987642 2221111100 23
Q ss_pred ccHHHH-HHHHHHHHHh-cCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 100 LSVDDL-ADQIAEVLNH-FGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 100 ~~~~~~-~~~l~~~l~~-l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
.+++++ ++++..+++. +++ ++++|+||||||.+|+.+|.++|+++++++++++.....
T Consensus 91 ~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 152 (280)
T 1dqz_A 91 YKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPS 152 (280)
T ss_dssp CBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTT
T ss_pred ccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccccc
Confidence 566654 5888888887 776 489999999999999999999999999999999876543
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.67 E-value=2.4e-17 Score=137.44 Aligned_cols=106 Identities=9% Similarity=0.079 Sum_probs=83.5
Q ss_pred CCCCeEEEecccccch-hhhccccccCchhhhccc--CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc
Q 022316 40 QDKPALVTYPDLALNY-MSCFQGLFFCPEACSLLL--HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF 116 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~-~~~~~~~~w~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l 116 (299)
+++|+||++||++.++ .. |...+...+. .+|+|+++|+||+|.|... ....+++++++++.++++.+
T Consensus 68 ~~~~~vvllHG~~~s~~~~------w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~----~~~~~~~~~~~dl~~~i~~l 137 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENS------WLSDMCKNMFQVEKVNCICVDWKGGSKAQYS----QASQNIRVVGAEVAYLVQVL 137 (432)
T ss_dssp TTSEEEEEECCTTCCTTSH------HHHHHHHHHHHHCCEEEEEEECHHHHTSCHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCch------HHHHHHHHHHhcCCcEEEEEECccccCccch----hhHhhHHHHHHHHHHHHHHH
Confidence 4578999999998887 23 4342334443 5999999999999988521 12356777888888888776
Q ss_pred ----C--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 117 ----G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 117 ----~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
+ .++++|+||||||.+|+.+|.++|++|+++++++|...
T Consensus 138 ~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 138 STSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp HHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred HHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 4 58999999999999999999999999999999998654
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.3e-16 Score=129.26 Aligned_cols=112 Identities=16% Similarity=0.162 Sum_probs=80.5
Q ss_pred CCCeEEEecccccchhhhc-cccccCchhhhcccCceEEEEECCCCCCCCCCCC------CCCCCcccHHHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCF-QGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI------SDDEPVLSVDDLADQIAEVL 113 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~-~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~~~l~~~l 113 (299)
.+.||+|+||..++..... ...++ ..+++. -++.|+++|+||||+|.+.. ...-...+.+++++|+..++
T Consensus 37 ~g~Pi~l~~Ggeg~~~~~~~~~g~~-~~lA~~--~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~ 113 (446)
T 3n2z_B 37 NGGSILFYTGNEGDIIWFCNNTGFM-WDVAEE--LKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELI 113 (446)
T ss_dssp TTCEEEEEECCSSCHHHHHHHCHHH-HHHHHH--HTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcchhhhhcccHH-HHHHHH--hCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHH
Confidence 3446888898877653311 01111 111221 16799999999999996421 11223457899999999999
Q ss_pred HhcCC-------CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 114 NHFGL-------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 114 ~~l~~-------~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
+.++. .+++++||||||++|+.++.++|++|.++|+.+++..
T Consensus 114 ~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 114 KHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchh
Confidence 88754 3899999999999999999999999999999886654
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.6e-15 Score=118.65 Aligned_cols=121 Identities=10% Similarity=0.074 Sum_probs=80.5
Q ss_pred eEEEEeccC-CCCCeEEEecccc--cchhhhccccccCch--hhhcc-cCceEEEEECCCCCC-CCCCCCCC-C-C--Cc
Q 022316 31 SLSVTIYGD-QDKPALVTYPDLA--LNYMSCFQGLFFCPE--ACSLL-LHNFCIYHINPPGHE-FGAAAISD-D-E--PV 99 (299)
Q Consensus 31 ~l~~~~~g~-~~~p~lvl~HG~~--~~~~~~~~~~~w~~~--~~~~l-~~~~~vi~~D~~G~G-~S~~~~~~-~-~--~~ 99 (299)
++.+..... +..|+|||+||.+ .+... |... +.+++ ..++.|+++|.++.. .++...+. . . ..
T Consensus 22 ~i~v~~~p~~~~~p~vvllHG~~~~~~~~~------w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~ 95 (304)
T 1sfr_A 22 DIKVQFQSGGANSPALYLLDGLRAQDDFSG------WDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQT 95 (304)
T ss_dssp EEEEEEECCSTTBCEEEEECCTTCCSSSCH------HHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEEC
T ss_pred ceEEEECCCCCCCCEEEEeCCCCCCCCcch------hhcCCCHHHHHhcCCeEEEEECCCCCccccccCCcccccccccc
Confidence 555553221 4568999999994 34332 3221 22333 358999999997642 22211110 0 0 12
Q ss_pred ccHHHH-HHHHHHHHHh-cCCC--cEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 100 LSVDDL-ADQIAEVLNH-FGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 100 ~~~~~~-~~~l~~~l~~-l~~~--~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
..++++ ++++..+++. +++. +++|+|+||||.+|+.+|.++|+++++++++++.....
T Consensus 96 ~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 157 (304)
T 1sfr_A 96 YKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (304)
T ss_dssp CBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred ccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcc
Confidence 456665 4788888876 5654 89999999999999999999999999999999876543
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.62 E-value=5.5e-17 Score=133.82 Aligned_cols=119 Identities=9% Similarity=0.076 Sum_probs=80.3
Q ss_pred CCCCeEEEecccccchhh--hccccccCc---hhhhcc-cCceEEEEECCCCCCCCCCCCCC---------------CCC
Q 022316 40 QDKPALVTYPDLALNYMS--CFQGLFFCP---EACSLL-LHNFCIYHINPPGHEFGAAAISD---------------DEP 98 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~--~~~~~~w~~---~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~---------------~~~ 98 (299)
.++++|||+||++.+... .....+|.. .+.+.| ..||+|+++|+||||.|...... ...
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 356789999999875321 011133631 234444 56999999999999977411000 000
Q ss_pred cccHHHHHHHHHHHHHhcCC-CcEEEEeeCccHHHHHHHHHH--------------------------ccCcccEEEEec
Q 022316 99 VLSVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMK--------------------------YRHRVLGLILVS 151 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~-~~~~lvG~S~Gg~va~~~a~~--------------------------~p~~v~~lvl~~ 151 (299)
.++++++++++.++++.++. ++++||||||||.++..+|.. +|++|.++|+++
T Consensus 130 ~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~ 209 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIA 209 (431)
T ss_dssp HHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEES
T ss_pred cCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEEC
Confidence 12333444555666777764 899999999999999999876 689999999999
Q ss_pred CCCCCcc
Q 022316 152 PLCKAPS 158 (299)
Q Consensus 152 ~~~~~~~ 158 (299)
++.....
T Consensus 210 tP~~Gs~ 216 (431)
T 2hih_A 210 TPHNGTH 216 (431)
T ss_dssp CCTTCCH
T ss_pred CCCCCch
Confidence 8765543
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.60 E-value=7.1e-14 Score=121.95 Aligned_cols=134 Identities=11% Similarity=0.065 Sum_probs=83.4
Q ss_pred cceeecCCc-eEEEEeccCC---CCCeEEEecccccchhh-hccccccCchh----hhcccCceEEEEECCCCCCCCCCC
Q 022316 22 DNLIKTSHG-SLSVTIYGDQ---DKPALVTYPDLALNYMS-CFQGLFFCPEA----CSLLLHNFCIYHINPPGHEFGAAA 92 (299)
Q Consensus 22 ~~~i~~~~~-~l~~~~~g~~---~~p~lvl~HG~~~~~~~-~~~~~~w~~~~----~~~l~~~~~vi~~D~~G~G~S~~~ 92 (299)
...++..+| +|++..+.+. ..|+||++||++.+... ......|...+ ..+..+||.|+++|.||+|.|...
T Consensus 27 ~v~i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~ 106 (615)
T 1mpx_A 27 EVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGD 106 (615)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEEECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCc
Confidence 344555444 7877766542 34678888988775300 00000011111 234567999999999999998754
Q ss_pred CCCCC------Cc---ccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 93 ISDDE------PV---LSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 93 ~~~~~------~~---~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
..... .. ...+|..+.+..+.+.... .++.++||||||.+++.+|..+|++++++|.+++...
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 107 YVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred cccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 32110 00 2233333333333332122 4899999999999999999889999999999998766
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.59 E-value=9.7e-15 Score=118.82 Aligned_cols=110 Identities=10% Similarity=0.044 Sum_probs=73.9
Q ss_pred CCCCeEEEecccccchhhh-ccccccCchh---hhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH----
Q 022316 40 QDKPALVTYPDLALNYMSC-FQGLFFCPEA---CSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA---- 110 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~-~~~~~w~~~~---~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~---- 110 (299)
+++++|||+||++.+.... ....+|.... .+.| ..||+|+++|+||+|.|.. ...++.+.+.
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~---------~a~~l~~~i~~~~v 74 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD---------RACEAYAQLVGGTV 74 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH---------HHHHHHHHHHCEEE
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc---------cHHHHHHHHHhhhh
Confidence 3567899999998765321 1112364322 2444 5699999999999997621 1122222222
Q ss_pred --------------------HHHHh-cCCCcEEEEeeCccHHHHHHHHHH-------------------cc------Ccc
Q 022316 111 --------------------EVLNH-FGLGAVMCMGVTAGAYILTLFAMK-------------------YR------HRV 144 (299)
Q Consensus 111 --------------------~~l~~-l~~~~~~lvG~S~Gg~va~~~a~~-------------------~p------~~v 144 (299)
++++. .+.++++||||||||.++..++.+ +| ++|
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V 154 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFV 154 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccce
Confidence 12223 467899999999999999999973 36 789
Q ss_pred cEEEEecCCCCCcc
Q 022316 145 LGLILVSPLCKAPS 158 (299)
Q Consensus 145 ~~lvl~~~~~~~~~ 158 (299)
+++|+++++.....
T Consensus 155 ~sLV~i~tP~~Gs~ 168 (387)
T 2dsn_A 155 LSVTTIATPHDGTT 168 (387)
T ss_dssp EEEEEESCCTTCCG
T ss_pred eEEEEECCCCCCcH
Confidence 99999998766543
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.3e-14 Score=116.36 Aligned_cols=111 Identities=13% Similarity=0.067 Sum_probs=70.8
Q ss_pred CCeEEEecccccchhhhcccccc---------------Cchhhhc-ccCceEEEEECCCCCCCCCCCCCCCCCcccHHHH
Q 022316 42 KPALVTYPDLALNYMSCFQGLFF---------------CPEACSL-LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w---------------~~~~~~~-l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (299)
.|+|.+-||.-+.+..|.-+..+ ...+..+ +.+||.|+++|++|+|.+.. .....-...
T Consensus 106 ~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y~-----~~~~~~~~v 180 (462)
T 3guu_A 106 PKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFI-----AGYEEGMAI 180 (462)
T ss_dssp CEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCTT-----CHHHHHHHH
T ss_pred CcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCccc-----CCcchhHHH
Confidence 56788889986654444322110 0123445 78899999999999996421 111122233
Q ss_pred HHHHHHHHHhcCC---CcEEEEeeCccHHHHHHHHHHcc----C-cccEEEEecCCCCCc
Q 022316 106 ADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYR----H-RVLGLILVSPLCKAP 157 (299)
Q Consensus 106 ~~~l~~~l~~l~~---~~~~lvG~S~Gg~va~~~a~~~p----~-~v~~lvl~~~~~~~~ 157 (299)
.+.+.+..+..++ .++.++|||+||..++..|...| + .+.+.+..+++....
T Consensus 181 lD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~dl~ 240 (462)
T 3guu_A 181 LDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVSAK 240 (462)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCBHH
T ss_pred HHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCCHH
Confidence 4444444433333 68999999999999988877654 3 588888888876543
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=7.5e-13 Score=106.40 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=75.2
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC-
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL- 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~- 118 (299)
+++++|+|+||++++... | ..+...+. ++|+++|+|+ .. ...+++++++++.+.++.+..
T Consensus 44 ~~~~~l~~~hg~~g~~~~------~-~~~~~~l~--~~v~~~~~~~--~~--------~~~~~~~~a~~~~~~i~~~~~~ 104 (316)
T 2px6_A 44 SSERPLFLVHPIEGSTTV------F-HSLASRLS--IPTYGLQCTR--AA--------PLDSIHSLAAYYIDCIRQVQPE 104 (316)
T ss_dssp CSSCCEEEECCTTCCSGG------G-HHHHHHCS--SCEEEECCCT--TS--------CTTCHHHHHHHHHHHHTTTCSS
T ss_pred CCCCeEEEECCCCCCHHH------H-HHHHHhcC--CCEEEEECCC--CC--------CcCCHHHHHHHHHHHHHHhCCC
Confidence 356789999999877644 4 33345554 9999999993 11 136899999999999998864
Q ss_pred CcEEEEeeCccHHHHHHHHHHcc---Cc---ccEEEEecCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYR---HR---VLGLILVSPLC 154 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p---~~---v~~lvl~~~~~ 154 (299)
++++++||||||.+|+++|.+.+ ++ |++++++++.+
T Consensus 105 ~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 105 GPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp CCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 78999999999999999998764 45 89999998764
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.9e-13 Score=116.03 Aligned_cols=128 Identities=14% Similarity=0.142 Sum_probs=84.7
Q ss_pred ceeecCCc-eEEEEeccC---CCCCeEEEecccccchhhhcc---------------cc-ccC-chhhhcccCceEEEEE
Q 022316 23 NLIKTSHG-SLSVTIYGD---QDKPALVTYPDLALNYMSCFQ---------------GL-FFC-PEACSLLLHNFCIYHI 81 (299)
Q Consensus 23 ~~i~~~~~-~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~---------------~~-~w~-~~~~~~l~~~~~vi~~ 81 (299)
..|+..+| +|....+-+ ++.|+||+.||++.+....+. .+ -|. +....+...||.|+++
T Consensus 44 v~i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~~ 123 (560)
T 3iii_A 44 GTVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKV 123 (560)
T ss_dssp EEEECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEEE
T ss_pred EEEECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEEE
Confidence 34555444 777666543 245789999999887321000 00 010 1123455679999999
Q ss_pred CCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC---C--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 82 NPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG---L--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 82 D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~---~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
|.||+|.|..... .+. .+..+|+.++++.+. . +++.++|+|+||.+++.+|+.+|++++++|..++...
T Consensus 124 D~RG~G~S~G~~~----~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d 197 (560)
T 3iii_A 124 ALRGSDKSKGVLS----PWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLND 197 (560)
T ss_dssp ECTTSTTCCSCBC----TTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCB
T ss_pred cCCCCCCCCCccc----cCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCccc
Confidence 9999999975322 111 244555555554432 2 5899999999999999999999999999999987654
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-12 Score=114.86 Aligned_cols=135 Identities=12% Similarity=0.089 Sum_probs=83.2
Q ss_pred cceeecCCc-eEEEEeccCC---CCCeEEEecccccchhhh--ccccccC---chh-hhcccCceEEEEECCCCCCCCCC
Q 022316 22 DNLIKTSHG-SLSVTIYGDQ---DKPALVTYPDLALNYMSC--FQGLFFC---PEA-CSLLLHNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 22 ~~~i~~~~~-~l~~~~~g~~---~~p~lvl~HG~~~~~~~~--~~~~~w~---~~~-~~~l~~~~~vi~~D~~G~G~S~~ 91 (299)
...++..+| +|+...+.+. +.|+||++||++.+.... +....|. ... ..+..+||.|+.+|.||+|.|..
T Consensus 39 ~v~i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~g 118 (652)
T 2b9v_A 39 EVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQG 118 (652)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCCC
Confidence 345666555 7776655432 346788889877653110 0000010 011 33456799999999999999875
Q ss_pred CCCCCC------C---cccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 92 AISDDE------P---VLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 92 ~~~~~~------~---~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
...... . ....+|..+.+..+.+..+. .++.++|+|+||.+++.+|.++|++++++|.+++....
T Consensus 119 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 119 DYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred cccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 432110 0 02233333333333332122 48999999999999999999899999999999876653
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=7.8e-12 Score=99.40 Aligned_cols=122 Identities=8% Similarity=0.003 Sum_probs=78.1
Q ss_pred eecCCceEEEEeccCC------CCCeEEEecccccchhhhccc-cccCchhhhcccC----ceEEEEECCCCCCCCCCCC
Q 022316 25 IKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQG-LFFCPEACSLLLH----NFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 25 i~~~~~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~-~~w~~~~~~~l~~----~~~vi~~D~~G~G~S~~~~ 93 (299)
+...++.+.+.++-++ +.|+|+++||.+.+....... ......+..+..+ ++.|+++|.+|- +..
T Consensus 46 ~~s~~~~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~--~~~-- 121 (297)
T 1gkl_A 46 YTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG--NCT-- 121 (297)
T ss_dssp EEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST--TCC--
T ss_pred EEcCCCEEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC--ccc--
Confidence 3444566666666442 346788899988765331110 0000112223333 599999998752 211
Q ss_pred CCCCCcccHHHHHHHHHHHHHhc-CC--------------CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHF-GL--------------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l-~~--------------~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
...+ .+.+++++...++.. .. +++.|+|+||||.+++.++.++|+++++++++++..
T Consensus 122 ---~~~~-~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 122 ---AQNF-YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp ---TTTH-HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred ---hHHH-HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 1112 345567777777653 22 458999999999999999999999999999999865
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.9e-12 Score=105.97 Aligned_cols=125 Identities=9% Similarity=0.095 Sum_probs=76.9
Q ss_pred CceEEEEeccC----CCCCeEEEecccccchhhhcccc--------ccC----chhhhcccCceEEEEECCCCCCCCCCC
Q 022316 29 HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGL--------FFC----PEACSLLLHNFCIYHINPPGHEFGAAA 92 (299)
Q Consensus 29 ~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~--------~w~----~~~~~~l~~~~~vi~~D~~G~G~S~~~ 92 (299)
+..+....+-+ ++.|+||++||.+.+........ .|. .....+...||.|+++|+||+|.|...
T Consensus 97 g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~s~~~ 176 (391)
T 3g8y_A 97 KSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDL 176 (391)
T ss_dssp TCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGGGCSS
T ss_pred CCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccccCCc
Confidence 33565544422 24579999999987654210000 011 223344567999999999999988643
Q ss_pred CCC-CCCcccHHHHH---------------HHHHHHHHhcC------CCcEEEEeeCccHHHHHHHHHHccCcccEEEEe
Q 022316 93 ISD-DEPVLSVDDLA---------------DQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILV 150 (299)
Q Consensus 93 ~~~-~~~~~~~~~~~---------------~~l~~~l~~l~------~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~ 150 (299)
... ....+....++ .|+..+++.+. .+++.++||||||.+++.+|.. +++|+++|++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~-~~~i~a~v~~ 255 (391)
T 3g8y_A 177 ECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVL-DKDIYAFVYN 255 (391)
T ss_dssp GGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHH-CTTCCEEEEE
T ss_pred ccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHc-CCceeEEEEc
Confidence 110 00013333332 45555555442 2578999999999999988775 4679999988
Q ss_pred cCCC
Q 022316 151 SPLC 154 (299)
Q Consensus 151 ~~~~ 154 (299)
++..
T Consensus 256 ~~~~ 259 (391)
T 3g8y_A 256 DFLC 259 (391)
T ss_dssp SCBC
T ss_pred cCCC
Confidence 8644
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.9e-11 Score=99.44 Aligned_cols=124 Identities=10% Similarity=0.095 Sum_probs=75.0
Q ss_pred CceEEEEeccC----CCCCeEEEecccccchhhhc---------cccccC----chhhhcccCceEEEEECCCCCCCCCC
Q 022316 29 HGSLSVTIYGD----QDKPALVTYPDLALNYMSCF---------QGLFFC----PEACSLLLHNFCIYHINPPGHEFGAA 91 (299)
Q Consensus 29 ~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~---------~~~~w~----~~~~~~l~~~~~vi~~D~~G~G~S~~ 91 (299)
+.++....+-+ +..|+||++||.+.+..... ... |. .....+...||.|+++|+||+|.|..
T Consensus 102 g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~-y~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~ 180 (398)
T 3nuz_A 102 KCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDR-YKDPKLTQALNFVKEGYIAVAVDNPAAGEASD 180 (398)
T ss_dssp TBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCS-TTCTTTCHHHHHHTTTCEEEEECCTTSGGGCS
T ss_pred CcEEEEEEEeCCCCCCCccEEEEEcCCCCCccccccccccccccccc-ccchHHHHHHHHHHCCCEEEEecCCCCCcccc
Confidence 33565544422 24579999999987643211 000 11 22234456799999999999998853
Q ss_pred CCCCC----------------CCcccHHHHHHHHHHHHHhcC------CCcEEEEeeCccHHHHHHHHHHccCcccEEEE
Q 022316 92 AISDD----------------EPVLSVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLIL 149 (299)
Q Consensus 92 ~~~~~----------------~~~~~~~~~~~~l~~~l~~l~------~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl 149 (299)
..... .+.......+.|+..+++.+. .+++.++||||||.+++.+|+.. ++|+++|.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~~i~a~v~ 259 (398)
T 3nuz_A 181 LERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-TSIYAFVY 259 (398)
T ss_dssp SGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCEEEE
T ss_pred ccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-CcEEEEEE
Confidence 22100 000111123345555555543 25799999999999999887765 57899888
Q ss_pred ecCCC
Q 022316 150 VSPLC 154 (299)
Q Consensus 150 ~~~~~ 154 (299)
+++..
T Consensus 260 ~~~~~ 264 (398)
T 3nuz_A 260 NDFLC 264 (398)
T ss_dssp ESCBC
T ss_pred ecccc
Confidence 76533
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.6e-10 Score=88.82 Aligned_cols=128 Identities=9% Similarity=0.058 Sum_probs=74.5
Q ss_pred ceeecC--CceEEEEeccCC------CCCeEEEecccccchhhhccccccCchhhhcc-cCc---eEEEEECCCCCC---
Q 022316 23 NLIKTS--HGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHN---FCIYHINPPGHE--- 87 (299)
Q Consensus 23 ~~i~~~--~~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~---~~vi~~D~~G~G--- 87 (299)
..+... +..+.+.++-|+ +-|+|+++||.+.-... . . |......+. ..| +-|+++|.|+.+
T Consensus 21 ~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~--~-~-~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~ 96 (275)
T 2qm0_A 21 WKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTF--H-E-AVKIQSVRAEKTGVSPAIIVGVGYPIEGAFS 96 (275)
T ss_dssp EEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHH--H-H-HHHHHGGGHHHHCCCCCEEEEEECSCSSSCC
T ss_pred EEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHH--H-H-HHHHHhhcchhcCCCCeEEEEECCCCCCcCc
Confidence 344443 456777766542 23788999987531111 0 0 111111221 224 899999998731
Q ss_pred -------CCCCC----CC---------CCCCcccHHH-HHHHHHHHHHh-cCC--CcEEEEeeCccHHHHHHHHHHccCc
Q 022316 88 -------FGAAA----IS---------DDEPVLSVDD-LADQIAEVLNH-FGL--GAVMCMGVTAGAYILTLFAMKYRHR 143 (299)
Q Consensus 88 -------~S~~~----~~---------~~~~~~~~~~-~~~~l~~~l~~-l~~--~~~~lvG~S~Gg~va~~~a~~~p~~ 143 (299)
.+... .+ .......+.+ +.+++...++. +++ +++.++||||||.+++.++.++|+.
T Consensus 97 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~ 176 (275)
T 2qm0_A 97 GEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNA 176 (275)
T ss_dssp HHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGG
T ss_pred ccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchh
Confidence 01100 00 0000012333 33555555544 343 6899999999999999999999999
Q ss_pred ccEEEEecCCC
Q 022316 144 VLGLILVSPLC 154 (299)
Q Consensus 144 v~~lvl~~~~~ 154 (299)
+++++++++..
T Consensus 177 f~~~~~~s~~~ 187 (275)
T 2qm0_A 177 FQNYFISSPSI 187 (275)
T ss_dssp CSEEEEESCCT
T ss_pred hceeEEeCcee
Confidence 99999998863
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=5.1e-11 Score=98.62 Aligned_cols=117 Identities=11% Similarity=0.050 Sum_probs=72.6
Q ss_pred ceEEEEeccC-----CCCCeEEEecccccchhhhccccccCchhhhcccCce----EEEEECCCCCC-CCCCCCCCCCCc
Q 022316 30 GSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF----CIYHINPPGHE-FGAAAISDDEPV 99 (299)
Q Consensus 30 ~~l~~~~~g~-----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~----~vi~~D~~G~G-~S~~~~~~~~~~ 99 (299)
....+.++-+ ...|+|+++||.+.... . .++ ..+..+..+|+ .|+++|.+|++ ++. ..+ ...
T Consensus 180 ~~~~~~vy~P~~~~~~~~PvlvllHG~~~~~~---~-~~~-~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~-~~~--~~~ 251 (403)
T 3c8d_A 180 NSRRVWIFTTGDVTAEERPLAVLLDGEFWAQS---M-PVW-PVLTSLTHRQQLPPAVYVLIDAIDTTHRAH-ELP--CNA 251 (403)
T ss_dssp EEEEEEEEEC-----CCCCEEEESSHHHHHHT---S-CCH-HHHHHHHHTTSSCSCEEEEECCCSHHHHHH-HSS--SCH
T ss_pred CcEEEEEEeCCCCCCCCCCEEEEeCCHHHhhc---C-cHH-HHHHHHHHcCCCCCeEEEEECCCCCccccc-cCC--ChH
Confidence 3455555433 24589999999432111 1 111 22233444454 49999998742 221 111 111
Q ss_pred ccHHHHHHHHHHHHHh-cCC----CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 100 LSVDDLADQIAEVLNH-FGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~-l~~----~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
...+.+++++...++. ... ++++|+|+||||.+++.++.++|+++++++++++..
T Consensus 252 ~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~ 311 (403)
T 3c8d_A 252 DFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 311 (403)
T ss_dssp HHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEecccc
Confidence 1233345666666654 332 589999999999999999999999999999999865
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.68 E-value=5.3e-08 Score=82.52 Aligned_cols=110 Identities=17% Similarity=0.125 Sum_probs=69.5
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHHHHHHh-
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH- 115 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~- 115 (299)
.|+||++||.+....+.....+ ....+..+ ++.|+.+|+| |++.+............+.|....+..+.+.
T Consensus 97 ~PviV~iHGGg~~~g~~~~~~~---~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i 173 (489)
T 1qe3_A 97 LPVMVWIHGGAFYLGAGSEPLY---DGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENI 173 (489)
T ss_dssp EEEEEEECCSTTTSCCTTSGGG---CCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHG
T ss_pred CCEEEEECCCccccCCCCCccc---CHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHH
Confidence 5899999997643222111111 12334444 4999999999 6665432110112234566666555544443
Q ss_pred --cCC--CcEEEEeeCccHHHHHHHHHHc--cCcccEEEEecCCC
Q 022316 116 --FGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLC 154 (299)
Q Consensus 116 --l~~--~~~~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~~ 154 (299)
.+. ++++|+|+|+||.++..++... +++++++|+.++..
T Consensus 174 ~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 174 SAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 333 5899999999999988877643 56799999999876
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.2e-07 Score=80.66 Aligned_cols=112 Identities=16% Similarity=0.119 Sum_probs=73.2
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCc-eEEEEECCC----CCCCCCCCCC---CCCCcccHHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-FCIYHINPP----GHEFGAAAIS---DDEPVLSVDDLADQIAEV 112 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~-~~vi~~D~~----G~G~S~~~~~---~~~~~~~~~~~~~~l~~~ 112 (299)
+.|+||++||.+....+.....+ ....+..++ +.|+++|+| |++.+..... .......+.|....+..+
T Consensus 98 ~~Pviv~iHGGg~~~g~~~~~~~---~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv 174 (498)
T 2ogt_A 98 KRPVLFWIHGGAFLFGSGSSPWY---DGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWV 174 (498)
T ss_dssp CEEEEEEECCSTTTSCCTTCGGG---CCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCccCCCCCCCCcC---CHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHH
Confidence 45799999998744322222111 112333444 999999999 8886643111 011234566776666655
Q ss_pred HHhc---CC--CcEEEEeeCccHHHHHHHHHHc--cCcccEEEEecCCCC
Q 022316 113 LNHF---GL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (299)
Q Consensus 113 l~~l---~~--~~~~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~~~ 155 (299)
.+.+ +. ++++|+|+|.||.++..++... +..++++|+.++...
T Consensus 175 ~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 175 KENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 5543 33 6899999999999998887653 457999999998664
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=1.6e-07 Score=74.70 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=32.4
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCccc-EEEEecCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVL-GLILVSPLC 154 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~-~lvl~~~~~ 154 (299)
+++.|.|+|+||++++.++..+|+.++ +++++++.+
T Consensus 11 ~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p 47 (318)
T 2d81_A 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGP 47 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCC
T ss_pred ceEEEEEECHHHHHHHHHHHHCchhhhccceEEeccc
Confidence 689999999999999999999999999 888877643
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.59 E-value=6.2e-07 Score=72.01 Aligned_cols=50 Identities=10% Similarity=0.129 Sum_probs=38.0
Q ss_pred HHHHHHHHHHh-cCC-CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCC
Q 022316 105 LADQIAEVLNH-FGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (299)
Q Consensus 105 ~~~~l~~~l~~-l~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 154 (299)
+.+++...++. ... ....++||||||..++.++.++|+.+.+++.++|..
T Consensus 121 l~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~ 172 (331)
T 3gff_A 121 IEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSL 172 (331)
T ss_dssp HHHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCT
T ss_pred HHHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchh
Confidence 33445555543 332 234799999999999999999999999999999864
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=2.4e-05 Score=61.76 Aligned_cols=110 Identities=13% Similarity=0.086 Sum_probs=64.0
Q ss_pred CCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCC-------CCCCCCCC------------CCccc
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEF-------GAAAISDD------------EPVLS 101 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~-------S~~~~~~~------------~~~~~ 101 (299)
-|+|.++||.+.+........ .+.+.+. .+..++++|..-.+. +....... ...+.
T Consensus 49 ~PVLYlLhG~~~~~~~w~~~~----~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~ 124 (299)
T 4fol_A 49 IPTVFYLSGLTCTPDNASEKA----FWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQ 124 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHS----CHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCB
T ss_pred cCEEEEECCCCCChHHHHHhc----hHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCcc
Confidence 489999999988875522111 1122222 367888887432211 00000000 01123
Q ss_pred HH-HHHHHHHHHHHh-cCC---------CcEEEEeeCccHHHHHHHHHHc--cCcccEEEEecCCCC
Q 022316 102 VD-DLADQIAEVLNH-FGL---------GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (299)
Q Consensus 102 ~~-~~~~~l~~~l~~-l~~---------~~~~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~~~ 155 (299)
++ .++++|..+++. +.. ++..|.||||||.-|+.+|.++ |++..++...++...
T Consensus 125 ~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~ 191 (299)
T 4fol_A 125 MYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccC
Confidence 33 356677776653 222 4689999999999999999986 566777777666543
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.46 E-value=3.8e-07 Score=78.45 Aligned_cols=108 Identities=19% Similarity=0.097 Sum_probs=70.9
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCC----CCCCCCCCCCCCCcccHHHHHHHHHHHHHh--
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG----HEFGAAAISDDEPVLSVDDLADQIAEVLNH-- 115 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G----~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~-- 115 (299)
.|+||++||.+....+.....+. ...+...|+.|+++|+|. +..+... .......+.|....+.-+.+.
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~---~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~--~~~~n~gl~D~~~al~wv~~~i~ 189 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHG---PEYLVSKDVIVITFNYRLNVYGFLSLNST--SVPGNAGLRDMVTLLKWVQRNAH 189 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCB---CTTGGGGSCEEEEECCCCHHHHHCCCSSS--SCCSCHHHHHHHHHHHHHHHHTG
T ss_pred CCEEEEEcCCccccCCCcccccC---HHHHHhCCeEEEEeCCcCCccccccCccc--CCCCchhHHHHHHHHHHHHHHHH
Confidence 57999999976543332221211 134445799999999994 3322111 111235677777666555544
Q ss_pred -cCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCC
Q 022316 116 -FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLC 154 (299)
Q Consensus 116 -l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~ 154 (299)
.+. ++++|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 190 ~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 190 FFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred HhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 343 579999999999999888765 356799999999864
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=4e-06 Score=63.81 Aligned_cols=134 Identities=10% Similarity=-0.017 Sum_probs=83.5
Q ss_pred ceeecC---CceEEEEeccC----CCCCeEEEecccccchhhh-ccccccCchh-----------hhcccCceEEEEECC
Q 022316 23 NLIKTS---HGSLSVTIYGD----QDKPALVTYPDLALNYMSC-FQGLFFCPEA-----------CSLLLHNFCIYHINP 83 (299)
Q Consensus 23 ~~i~~~---~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~-~~~~~w~~~~-----------~~~l~~~~~vi~~D~ 83 (299)
-+++++ +..|.|..+.. .+.|+++.++|.++++... ..-.-..|.. ..-..+...++.+|.
T Consensus 22 Gy~~v~~~~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDq 101 (255)
T 1whs_A 22 GYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDS 101 (255)
T ss_dssp EEEEEETTTTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECC
T ss_pred EEEECCCCCCcEEEEEEEEecCCCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEec
Confidence 355553 44787765432 4678999999987765442 1000000000 112234578999997
Q ss_pred -CCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh-------cCCCcEEEEeeCccHHHHHHHHHHc------cCcccEEEE
Q 022316 84 -PGHEFGAAAISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKY------RHRVLGLIL 149 (299)
Q Consensus 84 -~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~-------l~~~~~~lvG~S~Gg~va~~~a~~~------p~~v~~lvl 149 (299)
.|.|.|...........+.++.++++..+++. +...+++|.|+|+||..+..+|..- .-.++++++
T Consensus 102 PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~i 181 (255)
T 1whs_A 102 PAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMV 181 (255)
T ss_dssp STTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEE
T ss_pred CCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEe
Confidence 59998864322111124667777777777653 3446899999999999988887642 135899999
Q ss_pred ecCCCCC
Q 022316 150 VSPLCKA 156 (299)
Q Consensus 150 ~~~~~~~ 156 (299)
.++....
T Consensus 182 gn~~~d~ 188 (255)
T 1whs_A 182 GNGLIDD 188 (255)
T ss_dssp EEECCBH
T ss_pred cCCccCH
Confidence 9986653
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.39 E-value=2.9e-06 Score=80.63 Aligned_cols=91 Identities=18% Similarity=0.260 Sum_probs=61.8
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC-C
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-G 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~ 119 (299)
..++++++|+.++.... | ..+...+. .+.|++++.++. +++++...+.+..+.. +
T Consensus 1057 ~~~~L~~l~~~~g~~~~------y-~~la~~L~-~~~v~~l~~~~~----------------~~~~~~~~~~i~~~~~~g 1112 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLGYGLM------Y-QNLSSRLP-SYKLCAFDFIEE----------------EDRLDRYADLIQKLQPEG 1112 (1304)
T ss_dssp SCCEEECCCCTTCBGGG------G-HHHHTTCC-SCEEEECBCCCS----------------TTHHHHHHHHHHHHCCSS
T ss_pred cCCcceeecccccchHH------H-HHHHhccc-ccceEeecccCH----------------HHHHHHHHHHHHHhCCCC
Confidence 45689999988766533 2 23345555 789998877433 1223333444444443 5
Q ss_pred cEEEEeeCccHHHHHHHHHHcc---CcccEEEEecCCCC
Q 022316 120 AVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCK 155 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~~~ 155 (299)
++.++|||+||.+|.++|.+.. ..+..++++++...
T Consensus 1113 p~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~ 1151 (1304)
T 2vsq_A 1113 PLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKK 1151 (1304)
T ss_dssp CEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEE
T ss_pred CeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCccc
Confidence 8999999999999999998654 45889999987543
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.35 E-value=5.5e-06 Score=69.08 Aligned_cols=133 Identities=10% Similarity=-0.010 Sum_probs=81.4
Q ss_pred cceeecCC-ceEEEEeccC----CCCCeEEEecccccchhhhccccccCchh-----------hhcccCceEEEEECC-C
Q 022316 22 DNLIKTSH-GSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEA-----------CSLLLHNFCIYHINP-P 84 (299)
Q Consensus 22 ~~~i~~~~-~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~-----------~~~l~~~~~vi~~D~-~ 84 (299)
.-+++++. ..+.|..+.. .+.|+++.+||.++.+.....-.-..|.. ..-..+...++.+|. +
T Consensus 23 sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~ 102 (452)
T 1ivy_A 23 SGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPA 102 (452)
T ss_dssp EEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCST
T ss_pred EEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCC
Confidence 34677754 5787776542 35789999999877653321000000110 011234578999996 7
Q ss_pred CCCCCCCCCCCCCCcccHHHHHHH----HHHHHHh---cCCCcEEEEeeCccHHHHHHHHHH----ccCcccEEEEecCC
Q 022316 85 GHEFGAAAISDDEPVLSVDDLADQ----IAEVLNH---FGLGAVMCMGVTAGAYILTLFAMK----YRHRVLGLILVSPL 153 (299)
Q Consensus 85 G~G~S~~~~~~~~~~~~~~~~~~~----l~~~l~~---l~~~~~~lvG~S~Gg~va~~~a~~----~p~~v~~lvl~~~~ 153 (299)
|.|.|..... ....+-.+.++| +..+++. +...+++|.|+|+||..+..+|.. .+-.++++++.++.
T Consensus 103 GtGfS~~~~~--~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~ 180 (452)
T 1ivy_A 103 GVGFSYSDDK--FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp TSTTCEESSC--CCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCCcCCcCCC--CCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCc
Confidence 9999964321 111233334444 4455554 344789999999999977766654 35679999999987
Q ss_pred CCC
Q 022316 154 CKA 156 (299)
Q Consensus 154 ~~~ 156 (299)
...
T Consensus 181 ~d~ 183 (452)
T 1ivy_A 181 SSY 183 (452)
T ss_dssp SBH
T ss_pred cCh
Confidence 654
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.34 E-value=1e-06 Score=75.67 Aligned_cols=109 Identities=16% Similarity=0.060 Sum_probs=69.3
Q ss_pred CCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHHHHHHh-
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH- 115 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~- 115 (299)
.|+||++||.+....+.....+. . ..+.. .|+.|+.+|+| |++.+.. .+.......+.|....+.-+.+.
T Consensus 112 ~Pviv~iHGGg~~~g~~~~~~~~-~--~~la~~~g~vvv~~nYRlg~~Gf~~~~~-~~~~~~n~gl~D~~~al~wv~~~i 187 (543)
T 2ha2_A 112 TPVLIWIYGGGFYSGAASLDVYD-G--RFLAQVEGAVLVSMNYRVGTFGFLALPG-SREAPGNVGLLDQRLALQWVQENI 187 (543)
T ss_dssp EEEEEEECCSTTTCCCTTSGGGC-T--HHHHHHHCCEEEEECCCCHHHHHCCCTT-CSSCCSCHHHHHHHHHHHHHHHHG
T ss_pred CeEEEEECCCccccCCCCCCcCC-h--HHHHhcCCEEEEEecccccccccccCCC-CCCCCCcccHHHHHHHHHHHHHHH
Confidence 37999999987543332221211 1 23333 58999999999 4443310 01111235577776666555544
Q ss_pred --cCC--CcEEEEeeCccHHHHHHHHHHc--cCcccEEEEecCCC
Q 022316 116 --FGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLC 154 (299)
Q Consensus 116 --l~~--~~~~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~~ 154 (299)
.+. ++++|+|+|.||..+..++... +..++++|+.++..
T Consensus 188 ~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 188 AAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 343 5899999999999988776543 46799999999854
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=1.4e-06 Score=74.75 Aligned_cols=108 Identities=17% Similarity=0.119 Sum_probs=70.9
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHHHHHHh
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (299)
+.|+||++||.+....+... |.. ..+.. .|+.|+++|+| |++.+.... ......+.|....+.-+.+.
T Consensus 114 ~~Pv~v~iHGG~~~~g~~~~---~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~--~~~n~gl~D~~~al~wv~~n 186 (542)
T 2h7c_A 114 RLPVMVWIHGGGLMVGAAST---YDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEH--SRGNWGHLDQVAALRWVQDN 186 (542)
T ss_dssp CEEEEEEECCSTTTSCCSTT---SCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTT--CCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCccc---cCH--HHHHhcCCEEEEecCCCCccccCCCCCccc--CccchhHHHHHHHHHHHHHH
Confidence 35799999997754333211 211 12333 58999999999 555442211 11235566766665555443
Q ss_pred ---cCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCC
Q 022316 116 ---FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (299)
Q Consensus 116 ---l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~ 155 (299)
.+. ++++|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 187 i~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 187 IASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 343 589999999999999888775 3568999999997654
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.31 E-value=2.5e-06 Score=73.07 Aligned_cols=111 Identities=15% Similarity=0.060 Sum_probs=71.2
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHHHHHHh
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (299)
+.|+||++||.+....+.....+. . ..+.. .|+.|+++++| |++.+... +.......+.|....+.-+.+.
T Consensus 106 ~~Pv~v~iHGGg~~~g~~~~~~~~-~--~~la~~~~~vvv~~nYRlg~~Gf~~~~~~-~~~~~n~gl~D~~~al~wv~~~ 181 (529)
T 1p0i_A 106 NATVLIWIYGGGFQTGTSSLHVYD-G--KFLARVERVIVVSMNYRVGALGFLALPGN-PEAPGNMGLFDQQLALQWVQKN 181 (529)
T ss_dssp SEEEEEEECCSTTTSCCTTCGGGC-T--HHHHHHHCCEEEEECCCCHHHHHCCCTTC-TTSCSCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCccccCCCCccccC-h--HHHhccCCeEEEEecccccccccccCCCC-CCCcCcccHHHHHHHHHHHHHH
Confidence 458999999976543332222211 1 23333 58999999999 44433110 1112235577776666555444
Q ss_pred ---cCC--CcEEEEeeCccHHHHHHHHHHc--cCcccEEEEecCCCC
Q 022316 116 ---FGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (299)
Q Consensus 116 ---l~~--~~~~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~~~ 155 (299)
.+. ++++|+|+|.||..+..++... +..++++|+.++...
T Consensus 182 i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 182 IAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred HHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 344 5899999999999998877653 457999999998653
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.27 E-value=9.2e-07 Score=75.56 Aligned_cols=113 Identities=15% Similarity=0.092 Sum_probs=69.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHHHHHHh-
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH- 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~- 115 (299)
+.|+||++||.+....+. ..+....+......|+.|+++|+| |++.+...........-+.|....+.-+.+.
T Consensus 101 ~~Pviv~iHGGg~~~g~~--~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni 178 (522)
T 1ukc_A 101 KLPVWLFIQGGGYAENSN--ANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYI 178 (522)
T ss_dssp CEEEEEEECCSTTTSCCS--CSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHG
T ss_pred CCCEEEEECCCccccCCc--cccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHH
Confidence 357999999987544321 121111112222459999999999 5554321100001235567776666555444
Q ss_pred --cCC--CcEEEEeeCccHHHHHHHHHHc----cCcccEEEEecCCCC
Q 022316 116 --FGL--GAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCK 155 (299)
Q Consensus 116 --l~~--~~~~lvG~S~Gg~va~~~a~~~----p~~v~~lvl~~~~~~ 155 (299)
.+. +++.|+|+|.||..+..++... +..++++|+.++...
T Consensus 179 ~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 179 EQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 343 5899999999998776655443 567999999987643
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.27 E-value=1.4e-06 Score=74.81 Aligned_cols=111 Identities=14% Similarity=0.040 Sum_probs=71.6
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHHHHHHh
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (299)
+.|+||++||.+....+.....+. . ..+. ..|+.|+++++| |++.+... +.......+.|....+.-+.+.
T Consensus 108 ~~Pv~v~iHGG~~~~g~~~~~~~~-~--~~la~~~~~vvv~~nYRlg~~Gf~~~~~~-~~~~~n~gl~D~~~al~wv~~n 183 (537)
T 1ea5_A 108 STTVMVWIYGGGFYSGSSTLDVYN-G--KYLAYTEEVVLVSLSYRVGAFGFLALHGS-QEAPGNVGLLDQRMALQWVHDN 183 (537)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGC-T--HHHHHHHTCEEEECCCCCHHHHHCCCTTC-SSSCSCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCCCccC-h--HHHHhcCCEEEEEeccCccccccccCCCC-CCCcCccccHHHHHHHHHHHHH
Confidence 458999999977654332222211 1 2333 459999999999 44433110 1112235577776666655544
Q ss_pred c---CC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCC
Q 022316 116 F---GL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (299)
Q Consensus 116 l---~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~ 155 (299)
+ +. ++++|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 184 i~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 184 IQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred HHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 3 43 689999999999998877664 3457999999998654
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.8e-05 Score=64.11 Aligned_cols=38 Identities=8% Similarity=-0.109 Sum_probs=32.5
Q ss_pred CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 118 ~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
.+++.++|||+||..++.+|+..+ ||+.+|..++....
T Consensus 218 ~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~G 255 (433)
T 4g4g_A 218 TKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAGG 255 (433)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTTT
T ss_pred hhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCCc
Confidence 378999999999999999998875 89999998875544
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=2e-05 Score=61.74 Aligned_cols=34 Identities=12% Similarity=-0.032 Sum_probs=31.4
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 153 (299)
+++.|+||||||.+++.++.+ |+.++++++++|.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 468999999999999999999 9999999999874
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=2.7e-05 Score=65.57 Aligned_cols=81 Identities=17% Similarity=0.192 Sum_probs=64.3
Q ss_pred ceEEEEECCCCCCCCCCCC-----CCCCCcccHHHHHHHHHHHHHhcC----C--CcEEEEeeCccHHHHHHHHHHccCc
Q 022316 75 NFCIYHINPPGHEFGAAAI-----SDDEPVLSVDDLADQIAEVLNHFG----L--GAVMCMGVTAGAYILTLFAMKYRHR 143 (299)
Q Consensus 75 ~~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~~~~~~l~~~l~~l~----~--~~~~lvG~S~Gg~va~~~a~~~p~~ 143 (299)
|--++.+++|-+|+|.+-. ...-...|.++-.+|+..+++.+. . .+++++|-|.||++|.-+-.++|+.
T Consensus 73 ~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~l 152 (472)
T 4ebb_A 73 GALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHL 152 (472)
T ss_dssp TCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTT
T ss_pred CCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCe
Confidence 6789999999999997511 012335688888888888886542 2 4799999999999999999999999
Q ss_pred ccEEEEecCCCC
Q 022316 144 VLGLILVSPLCK 155 (299)
Q Consensus 144 v~~lvl~~~~~~ 155 (299)
|.+.+.-+++..
T Consensus 153 v~ga~ASSApv~ 164 (472)
T 4ebb_A 153 VAGALAASAPVL 164 (472)
T ss_dssp CSEEEEETCCTT
T ss_pred EEEEEecccceE
Confidence 999988876654
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.03 E-value=3.2e-05 Score=61.86 Aligned_cols=37 Identities=5% Similarity=-0.065 Sum_probs=31.8
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
+++.++|||+||..|+.+|+..+ ||+.+|..++....
T Consensus 185 ~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~G 221 (375)
T 3pic_A 185 TKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAGG 221 (375)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTT
T ss_pred hhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCCc
Confidence 68999999999999999998875 89999998875543
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.03 E-value=4.6e-06 Score=71.63 Aligned_cols=112 Identities=20% Similarity=0.112 Sum_probs=67.6
Q ss_pred CCCeEEEecccccchhhhccccccCc-hhhhcc--cCceEEEEECCCCC----CCCCCCCCCCCCcccHHHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCP-EACSLL--LHNFCIYHINPPGH----EFGAAAISDDEPVLSVDDLADQIAEVL 113 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~-~~~~~l--~~~~~vi~~D~~G~----G~S~~~~~~~~~~~~~~~~~~~l~~~l 113 (299)
+.|+||++||.+....+.. .+... .+...+ ..++.|+.+|+|.- ..+............+.|....+.-+.
T Consensus 121 ~~Pviv~iHGGg~~~g~~~--~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~ 198 (544)
T 1thg_A 121 KLPVMVWIYGGAFVYGSSA--AYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVS 198 (544)
T ss_dssp CEEEEEEECCCTTCCSGGG--GCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCccccCCcc--ccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHH
Confidence 3579999999875543321 11101 111212 24799999999952 111000000012355677776666555
Q ss_pred Hhc---CC--CcEEEEeeCccHHHHHHHHHHc--------cCcccEEEEecCCC
Q 022316 114 NHF---GL--GAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLC 154 (299)
Q Consensus 114 ~~l---~~--~~~~lvG~S~Gg~va~~~a~~~--------p~~v~~lvl~~~~~ 154 (299)
+.+ +. ++++|+|+|.||..+..++... +..++++|+.++..
T Consensus 199 ~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 199 DNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 543 43 6899999999999988776653 45799999999754
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.4e-05 Score=69.31 Aligned_cols=112 Identities=15% Similarity=0.024 Sum_probs=69.2
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCC----CCCCCCCCC-----CCCCCcccHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAI-----SDDEPVLSVDDLADQIA 110 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~----G~G~S~~~~-----~~~~~~~~~~~~~~~l~ 110 (299)
+.|+||++||.+....+.....+. . ..+.. .++-|+++|+| |+....... .......-+.|....+.
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~-~--~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~ 216 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYN-A--DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 216 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGC-C--HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCCCC-c--hhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHH
Confidence 358999999987544332222211 1 22333 48999999999 444321100 01112355777766666
Q ss_pred HHHHhc---CC--CcEEEEeeCccHHHHHHHHHHc--cCcccEEEEecCCCC
Q 022316 111 EVLNHF---GL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (299)
Q Consensus 111 ~~l~~l---~~--~~~~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~~~ 155 (299)
-+.+.+ +. ++++|+|+|.||..+..++... ...++++|+.++...
T Consensus 217 wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~~ 268 (585)
T 1dx4_A 217 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 268 (585)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhccccC
Confidence 555443 33 5899999999999887766542 357899999987653
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=4.3e-06 Score=71.62 Aligned_cols=112 Identities=13% Similarity=0.043 Sum_probs=66.8
Q ss_pred CCCeEEEecccccchhhhccccccCch-hhhc--ccCceEEEEECCCCC--C--CCCCCCCCCCCcccHHHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPE-ACSL--LLHNFCIYHINPPGH--E--FGAAAISDDEPVLSVDDLADQIAEVL 113 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~-~~~~--l~~~~~vi~~D~~G~--G--~S~~~~~~~~~~~~~~~~~~~l~~~l 113 (299)
+.|+||++||.+....+.. .+.... +... ...++.|+.+|+|.- | .+............+.|....+.-+.
T Consensus 113 ~~Pv~v~iHGGg~~~g~~~--~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~ 190 (534)
T 1llf_A 113 NLPVMLWIFGGGFEIGSPT--IFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVA 190 (534)
T ss_dssp CEEEEEEECCSTTTSCCGG--GSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCcccCCCc--ccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHH
Confidence 3479999999875443321 111111 1111 135899999999942 1 11000000012355677776666665
Q ss_pred Hh---cCC--CcEEEEeeCccHHHHHHHHHHc--------cCcccEEEEecCCC
Q 022316 114 NH---FGL--GAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLC 154 (299)
Q Consensus 114 ~~---l~~--~~~~lvG~S~Gg~va~~~a~~~--------p~~v~~lvl~~~~~ 154 (299)
+. .+. ++++|+|+|.||..+..++... +..++++|+.++..
T Consensus 191 ~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 191 DNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 54 343 6899999999998777665543 55799999999754
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.93 E-value=1.9e-05 Score=68.14 Aligned_cols=110 Identities=16% Similarity=0.076 Sum_probs=67.3
Q ss_pred CCCeEEEecccccchhhhcccc-----ccCchhhhccc-CceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGL-----FFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIA 110 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~-----~w~~~~~~~l~-~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~ 110 (299)
+.|+||++||.+....+..... .+ .. ..+.. .++-|+.+++| |++.+.... .....-+.|....+.
T Consensus 97 ~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~-~~-~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~--~pgn~gl~D~~~Al~ 172 (579)
T 2bce_A 97 DLPVMIWIYGGAFLMGASQGANFLSNYLY-DG-EEIATRGNVIVVTFNYRVGPLGFLSTGDSN--LPGNYGLWDQHMAIA 172 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGG-CC-HHHHHHHTCEEEEECCCCHHHHHCCCSSTT--CCCCHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCcccccccccc-Ch-HHHhcCCCEEEEEeCCccccccCCcCCCCC--CCCccchHHHHHHHH
Confidence 3589999999875443321110 11 11 12223 37999999999 554332111 112345777776666
Q ss_pred HHHHh---cCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCC
Q 022316 111 EVLNH---FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLC 154 (299)
Q Consensus 111 ~~l~~---l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~ 154 (299)
-+.+. .+. +++.|+|+|.||..+..++.. ....+++.|+.++..
T Consensus 173 wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 173 WVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 55444 344 589999999999998877654 345789999988653
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=5.6e-05 Score=65.40 Aligned_cols=106 Identities=17% Similarity=0.093 Sum_probs=68.1
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHHHHHHh
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (299)
+.|+||++||.+....+.. . +.. ..+... ++.|+++|+| |+..+... .......+.|....+.-+.+.
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~--~-~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~--~~~~n~gl~D~~~al~wv~~n 202 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGN--L-YDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQ--AAKGNYGLLDLIQALRWTSEN 202 (574)
T ss_dssp CEEEEEECCCSSSSSCCGG--G-SCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSS--SCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCC--c-cCc--hhhhccCCEEEEEeCCcCcccccCcCCCC--CCCCcccHHHHHHHHHHHHHH
Confidence 3589999999875543322 1 112 223333 6999999999 33332211 011235677777777666554
Q ss_pred ---cCC--CcEEEEeeCccHHHHHHHHHHcc---CcccEEEEecCC
Q 022316 116 ---FGL--GAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPL 153 (299)
Q Consensus 116 ---l~~--~~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~ 153 (299)
.+. ++++|+|+|.||..+..++.... ..+.++|+.++.
T Consensus 203 i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 203 IGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred HHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 344 57999999999999988776543 458888988754
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00035 Score=58.87 Aligned_cols=127 Identities=10% Similarity=0.037 Sum_probs=77.4
Q ss_pred CceEEEEecc------CCCCCeEEEecccccchhhhccccccCchh----------hhcccCceEEEEECC-CCCCCCCC
Q 022316 29 HGSLSVTIYG------DQDKPALVTYPDLALNYMSCFQGLFFCPEA----------CSLLLHNFCIYHINP-PGHEFGAA 91 (299)
Q Consensus 29 ~~~l~~~~~g------~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~----------~~~l~~~~~vi~~D~-~G~G~S~~ 91 (299)
+..+.|..+. +.+.|.++.++|.++++.....-.-..|.. ..-..+...++.+|. .|.|.|..
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~ 127 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVE 127 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSS
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCC
Confidence 3467665432 235789999999877653321000000110 011234578999997 69998865
Q ss_pred CCCCC------CCcccHHHHHHHHHHHHHh-------cCCCcEEEEeeCccHHHHHHHHHHc------------cCcccE
Q 022316 92 AISDD------EPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKY------------RHRVLG 146 (299)
Q Consensus 92 ~~~~~------~~~~~~~~~~~~l~~~l~~-------l~~~~~~lvG~S~Gg~va~~~a~~~------------p~~v~~ 146 (299)
..... .-..+.++.++++..+|+. +...+++|.|+|+||..+..+|..- +-.+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkG 207 (483)
T 1ac5_A 128 QNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKA 207 (483)
T ss_dssp CCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEE
T ss_pred cCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceee
Confidence 32211 0123567778887777654 2347899999999999988777521 124788
Q ss_pred EEEecCCCC
Q 022316 147 LILVSPLCK 155 (299)
Q Consensus 147 lvl~~~~~~ 155 (299)
+++-++...
T Consensus 208 i~IGNg~~d 216 (483)
T 1ac5_A 208 LLIGNGWID 216 (483)
T ss_dssp EEEEEECCC
T ss_pred eEecCCccc
Confidence 887776554
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00012 Score=56.82 Aligned_cols=63 Identities=11% Similarity=0.074 Sum_probs=38.8
Q ss_pred ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc----CCCcEEEEeeCccHHHHHHHHHHc
Q 022316 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 75 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
+..+...++||+..... ...-...+..+.+++...++.+ ...++.+.||||||.+|..+|...
T Consensus 91 d~~~~~~~~p~~~~~~v---h~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKV---HKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEE---cHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 56777778888421111 0011234455555555544433 334699999999999999988766
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=8.8e-06 Score=81.24 Aligned_cols=94 Identities=18% Similarity=0.192 Sum_probs=0.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC-CC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LG 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~ 119 (299)
.+++++|+|+.+++... | ..+...+. ..|+.+..||. + ...++++++++..+.+.... .+
T Consensus 2241 ~~~~Lfc~~~agG~~~~------y-~~l~~~l~--~~v~~lq~pg~-----~-----~~~~i~~la~~~~~~i~~~~p~g 2301 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITV------F-HGLAAKLS--IPTYGLQCTGA-----A-----PLDSIQSLASYYIECIRQVQPEG 2301 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHH------H-HHHHHhhC--CcEEEEecCCC-----C-----CCCCHHHHHHHHHHHHHHhCCCC
Confidence 34679999887766533 2 22233343 78888888872 1 13578888888777776654 36
Q ss_pred cEEEEeeCccHHHHHHHHHHccC---ccc---EEEEecCC
Q 022316 120 AVMCMGVTAGAYILTLFAMKYRH---RVL---GLILVSPL 153 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~~p~---~v~---~lvl~~~~ 153 (299)
++.++||||||.+|+++|.+-.. .+. .++++++.
T Consensus 2302 py~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2302 PYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp ----------------------------------------
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 89999999999999999975432 344 67777763
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0002 Score=55.58 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=34.3
Q ss_pred cHHHHHHHHHHHHHh----cCCCcEEEEeeCccHHHHHHHHHHccC---cccEEEEecC
Q 022316 101 SVDDLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSP 152 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~----l~~~~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~ 152 (299)
.+..+.+++..+++. ....++++.||||||.+|..++..... .+..+++-+|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P 174 (269)
T 1tib_A 116 SWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAP 174 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 344555565555544 344589999999999999999987653 2444444333
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0089 Score=46.66 Aligned_cols=131 Identities=12% Similarity=0.016 Sum_probs=80.6
Q ss_pred ceeecCC-ceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhh-----------hcccCceEEEEECCC-C
Q 022316 23 NLIKTSH-GSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEAC-----------SLLLHNFCIYHINPP-G 85 (299)
Q Consensus 23 ~~i~~~~-~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~-----------~~l~~~~~vi~~D~~-G 85 (299)
-+++.+. ..|.|.-+.. .+.|.++.+-|.++.+.....-....+... .-..+...++.+|.| |
T Consensus 26 Gyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~PvG 105 (300)
T 4az3_A 26 GYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAG 105 (300)
T ss_dssp EEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTT
T ss_pred eeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhcCCCc
Confidence 4566644 4677765542 357888999887665432110000011100 011234679999976 8
Q ss_pred CCCCCCCCCCCCCcccHHHHHHHHHHHHHh-------cCCCcEEEEeeCccHHHHHHHHHHccC----cccEEEEecCCC
Q 022316 86 HEFGAAAISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLC 154 (299)
Q Consensus 86 ~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~-------l~~~~~~lvG~S~Gg~va~~~a~~~p~----~v~~lvl~~~~~ 154 (299)
.|.|..... ....+..+.++|+..++.. +.-.+++|.|-|+||..+..+|..--+ .++++++-++..
T Consensus 106 tGfSy~~~~--~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~~ 183 (300)
T 4az3_A 106 VGFSYSDDK--FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS 183 (300)
T ss_dssp STTCEETTC--CCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred ccccccCCC--cccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCcc
Confidence 888865322 2235667777777776642 344789999999999999888874322 478888888765
Q ss_pred C
Q 022316 155 K 155 (299)
Q Consensus 155 ~ 155 (299)
.
T Consensus 184 d 184 (300)
T 4az3_A 184 S 184 (300)
T ss_dssp B
T ss_pred C
Confidence 4
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00072 Score=52.45 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHH----HhcCCCcEEEEeeCccHHHHHHHHHHc
Q 022316 102 VDDLADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 102 ~~~~~~~l~~~l----~~l~~~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
+..+.+++...+ +.....++.+.||||||.+|..+|...
T Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 116 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 334444444444 444456899999999999999888766
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0088 Score=49.36 Aligned_cols=132 Identities=8% Similarity=0.033 Sum_probs=78.3
Q ss_pred CcceeecC--CceEEEEecc----CCCCCeEEEecccccchhhhccccccCchhh----------hcccCceEEEEECC-
Q 022316 21 KDNLIKTS--HGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQGLFFCPEAC----------SLLLHNFCIYHINP- 83 (299)
Q Consensus 21 ~~~~i~~~--~~~l~~~~~g----~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~----------~~l~~~~~vi~~D~- 83 (299)
..-+++++ +..+.|..+. +.+.|.++.++|.++.+.....-.-..|... .-..+...++-+|.
T Consensus 17 ysGYv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqP 96 (421)
T 1cpy_A 17 YTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQP 96 (421)
T ss_dssp CEEEEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCCS
T ss_pred eEEEEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccccCEEEecCC
Confidence 33466664 4577776443 2457899999998776533210000011100 01223467999994
Q ss_pred CCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh-------cCC--CcEEEEeeCccHHHHHHHHHHcc------CcccEEE
Q 022316 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNH-------FGL--GAVMCMGVTAGAYILTLFAMKYR------HRVLGLI 148 (299)
Q Consensus 84 ~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~-------l~~--~~~~lvG~S~Gg~va~~~a~~~p------~~v~~lv 148 (299)
.|.|.|..... ...+.++.++|+..+++. +.. .+++|.|.|+||..+..+|..-- -.+++++
T Consensus 97 vGtGfSy~~~~---~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~ 173 (421)
T 1cpy_A 97 VNVGFSYSGSS---GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVL 173 (421)
T ss_dssp TTSTTCEESSC---CCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEE
T ss_pred CcccccCCCCC---CCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEE
Confidence 69998864322 123445566666655532 233 58999999999999988886432 2478887
Q ss_pred EecCCCC
Q 022316 149 LVSPLCK 155 (299)
Q Consensus 149 l~~~~~~ 155 (299)
+-++...
T Consensus 174 IGNg~~d 180 (421)
T 1cpy_A 174 IGNGLTD 180 (421)
T ss_dssp EESCCCC
T ss_pred ecCcccC
Confidence 7776543
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0008 Score=52.50 Aligned_cols=40 Identities=25% Similarity=0.220 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHH----HhcCCCcEEEEeeCccHHHHHHHHHHcc
Q 022316 102 VDDLADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (299)
Q Consensus 102 ~~~~~~~l~~~l----~~l~~~~~~lvG~S~Gg~va~~~a~~~p 141 (299)
+..+.+++...+ +.....++++.||||||.+|..+|....
T Consensus 116 ~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 116 WKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 334444444444 3344468999999999999999888754
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0078 Score=46.24 Aligned_cols=131 Identities=14% Similarity=0.059 Sum_probs=72.9
Q ss_pred ceeecC---CceEEEEeccC-----CCCCeEEEecccccchhhh-ccccccCchhh-----------hcccCceEEEEEC
Q 022316 23 NLIKTS---HGSLSVTIYGD-----QDKPALVTYPDLALNYMSC-FQGLFFCPEAC-----------SLLLHNFCIYHIN 82 (299)
Q Consensus 23 ~~i~~~---~~~l~~~~~g~-----~~~p~lvl~HG~~~~~~~~-~~~~~w~~~~~-----------~~l~~~~~vi~~D 82 (299)
-+++++ +..|.|..+.. .+.|+++.++|.++++... ..-.-..|... .-..+...++-+|
T Consensus 27 Gyv~v~~~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiD 106 (270)
T 1gxs_A 27 GYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAE 106 (270)
T ss_dssp EEEEEETTTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEEC
T ss_pred EEEEcCCCCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEe
Confidence 355552 34787765432 3578999999987765432 10000011100 1112346799999
Q ss_pred C-CCCCCCCCCCCCCCCcccHHHHHHHHHHHHH-------hcCCCcEEEEeeCccHHHHHHHHHH---c-----cCcccE
Q 022316 83 P-PGHEFGAAAISDDEPVLSVDDLADQIAEVLN-------HFGLGAVMCMGVTAGAYILTLFAMK---Y-----RHRVLG 146 (299)
Q Consensus 83 ~-~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~-------~l~~~~~~lvG~S~Gg~va~~~a~~---~-----p~~v~~ 146 (299)
. .|.|.|........ ..+-++.++|+..+++ .+...+++|.|.| |-++. .+|.. . .-.+++
T Consensus 107 qPvGtGfSy~~~~~~~-~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP-~la~~i~~~n~~~~~inLkG 183 (270)
T 1gxs_A 107 SPAGVGFSYSNTSSDL-SMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIP-QLSQVVYRNRNNSPFINFQG 183 (270)
T ss_dssp CSTTSTTCEESSGGGG-CCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHH-HHHHHHHHTTTTCTTCEEEE
T ss_pred ccccccccCCCCCccc-cCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchH-HHHHHHHhccccccceeeee
Confidence 5 69998864322111 1234455666655553 2344689999999 65543 33331 1 124789
Q ss_pred EEEecCCCCC
Q 022316 147 LILVSPLCKA 156 (299)
Q Consensus 147 lvl~~~~~~~ 156 (299)
+++.++....
T Consensus 184 i~ign~~~d~ 193 (270)
T 1gxs_A 184 LLVSSGLTND 193 (270)
T ss_dssp EEEESCCCBH
T ss_pred EEEeCCccCh
Confidence 9998886653
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0033 Score=47.78 Aligned_cols=109 Identities=20% Similarity=0.160 Sum_probs=61.7
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEE-CCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI-NPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~-D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (299)
++|.|++.||.+....... .. ...+...+...+.+=.+ ++|-...+ .. .....-..++.+.+........-.
T Consensus 2 ~~p~ii~ARGT~e~~~~Gp-G~--~~~la~~l~~~~~~q~Vg~YpA~~~~---y~-~S~~~G~~~~~~~i~~~~~~CP~t 74 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGP-GL--PADTARDVLDIYRWQPIGNYPAAAFP---MW-PSVEKGVAELILQIELKLDADPYA 74 (254)
T ss_dssp CCCEEEEECCTTCCCTTSS-SH--HHHHHTTSTTTSEEEECCSCCCCSSS---CH-HHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCEEEEECCCCCCCCCCC-Cc--HHHHHHHHHHhcCCCccccccCcccC---cc-chHHHHHHHHHHHHHHHHhhCCCC
Confidence 4688999998876532110 00 02224444444444344 35543211 00 000112334444445555556668
Q ss_pred cEEEEeeCccHHHHHHHHHH-----------ccCcccEEEEecCCCCC
Q 022316 120 AVMCMGVTAGAYILTLFAMK-----------YRHRVLGLILVSPLCKA 156 (299)
Q Consensus 120 ~~~lvG~S~Gg~va~~~a~~-----------~p~~v~~lvl~~~~~~~ 156 (299)
+++|+|+|.|+.++-.++.. ..++|+++++++-+...
T Consensus 75 kiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r~ 122 (254)
T 3hc7_A 75 DFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMRQ 122 (254)
T ss_dssp CEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTCC
T ss_pred eEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCCC
Confidence 99999999999999887755 23579999999865544
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0014 Score=50.60 Aligned_cols=45 Identities=18% Similarity=0.157 Sum_probs=30.3
Q ss_pred HHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHcc---CcccEEEEecCC
Q 022316 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPL 153 (299)
Q Consensus 108 ~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~ 153 (299)
.+..+++.....++.+.|||+||.+|..+|.... .+|. ++..+++
T Consensus 114 ~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 114 LVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred HHHHHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCC
Confidence 3344444445568999999999999998887643 3455 4555544
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0021 Score=50.06 Aligned_cols=49 Identities=16% Similarity=0.065 Sum_probs=33.0
Q ss_pred HHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc----cCcccEEEEecCCC
Q 022316 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLC 154 (299)
Q Consensus 106 ~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~----p~~v~~lvl~~~~~ 154 (299)
.+.+..+++.....++.+.|||+||.+|..+|... |.....++..+++.
T Consensus 125 ~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~Pr 177 (279)
T 3uue_A 125 FTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPR 177 (279)
T ss_dssp HHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCCC
T ss_pred HHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCCC
Confidence 33444455555667899999999999999877643 44445556655543
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0021 Score=49.36 Aligned_cols=34 Identities=6% Similarity=0.200 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH
Q 022316 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 106 ~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~ 139 (299)
.+.+..+++.....++.+.|||+||++|..+|..
T Consensus 111 ~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 111 ITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 3444455555555789999999999999887764
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0024 Score=50.54 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=24.1
Q ss_pred HHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc
Q 022316 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 108 ~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
.+..+++.....++.+.|||+||++|..+|...
T Consensus 125 ~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~l 157 (319)
T 3ngm_A 125 AVAKARKANPSFKVVSVGHSLGGAVATLAGANL 157 (319)
T ss_dssp HHHHHHHSSTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCceEEeecCHHHHHHHHHHHHH
Confidence 334444444556899999999999999877753
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0027 Score=49.92 Aligned_cols=36 Identities=14% Similarity=0.312 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc
Q 022316 105 LADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 105 ~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
+.+.+..+++.....++.+.|||+||++|..+|...
T Consensus 140 i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 140 IGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 344555556665667899999999999999888754
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.37 E-value=0.014 Score=42.44 Aligned_cols=81 Identities=9% Similarity=0.060 Sum_probs=56.2
Q ss_pred CceEEEEE--CCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHcc----CcccEE
Q 022316 74 HNFCIYHI--NPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR----HRVLGL 147 (299)
Q Consensus 74 ~~~~vi~~--D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p----~~v~~l 147 (299)
+...|+.+ ++|-.-.... .+......-..++.+.|....+...-.+++|+|+|.|+.|+-..+...| ++|.++
T Consensus 51 ~~v~v~~V~~~YpA~~~~~~-~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~av 129 (197)
T 3qpa_A 51 DGVWIQGVGGAYRATLGDNA-LPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGT 129 (197)
T ss_dssp TTEEEEECCTTCCCCGGGGG-STTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEE
T ss_pred CceEEEeeCCCCcCCCCccc-CccccHHHHHHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEE
Confidence 45778888 7886521110 0101112345677777777778888899999999999999988776655 689999
Q ss_pred EEecCCCC
Q 022316 148 ILVSPLCK 155 (299)
Q Consensus 148 vl~~~~~~ 155 (299)
++++-+..
T Consensus 130 vlfGdP~~ 137 (197)
T 3qpa_A 130 VLFGYTKN 137 (197)
T ss_dssp EEESCTTT
T ss_pred EEeeCCcc
Confidence 99986543
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.021 Score=41.67 Aligned_cols=81 Identities=7% Similarity=0.089 Sum_probs=55.0
Q ss_pred CceEEEEE--CCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHcc----CcccEE
Q 022316 74 HNFCIYHI--NPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR----HRVLGL 147 (299)
Q Consensus 74 ~~~~vi~~--D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p----~~v~~l 147 (299)
+...|+.+ ++|-.-.... .+......-..++.+.|....+...-.+++|+|+|.|+.|+-..+...| ++|.++
T Consensus 59 ~~v~v~~V~~~YpA~~~~~~-~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~av 137 (201)
T 3dcn_A 59 NDVWVQGVGGPYLADLASNF-LPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGV 137 (201)
T ss_dssp GGEEEEECCTTCCCCSGGGG-STTSSCHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEE
T ss_pred CceEEEEeCCCccccCCccc-ccCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEE
Confidence 45778888 6775421100 0000112346677777777778888899999999999999988766544 578999
Q ss_pred EEecCCCC
Q 022316 148 ILVSPLCK 155 (299)
Q Consensus 148 vl~~~~~~ 155 (299)
++++-+..
T Consensus 138 vlfGdP~~ 145 (201)
T 3dcn_A 138 VLFGYTKN 145 (201)
T ss_dssp EEETCTTT
T ss_pred EEeeCccc
Confidence 99886543
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=95.61 E-value=0.031 Score=41.27 Aligned_cols=76 Identities=13% Similarity=0.135 Sum_probs=46.8
Q ss_pred ceEEEEECCCCCC-CCCCCCCCCCCcc--c----HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH--------
Q 022316 75 NFCIYHINPPGHE-FGAAAISDDEPVL--S----VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-------- 139 (299)
Q Consensus 75 ~~~vi~~D~~G~G-~S~~~~~~~~~~~--~----~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~-------- 139 (299)
+-.+..+++|-.. .+... ...| + ..++.+.|....+...-.+++|+|+|.|+.|+-.++..
T Consensus 35 g~~~~~V~YpA~~~~~~~~----~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i 110 (207)
T 1g66_A 35 GSTAEAINYPACGGQSSCG----GASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGY 110 (207)
T ss_dssp TCEEEECCCCCCSSCGGGT----SCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTB
T ss_pred CCceEEeeccccccccccC----CcchhhhHHHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhccccccccc
Confidence 3467888888752 11100 0112 2 23444445555556666899999999999999877641
Q ss_pred ------cc----CcccEEEEecCCC
Q 022316 140 ------YR----HRVLGLILVSPLC 154 (299)
Q Consensus 140 ------~p----~~v~~lvl~~~~~ 154 (299)
.| ++|+++++++-+.
T Consensus 111 ~~~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1g66_A 111 TNTAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp CCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred ccCCCCCChhhhccEEEEEEEcCCC
Confidence 12 4688888887644
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=95.39 E-value=0.041 Score=40.59 Aligned_cols=77 Identities=17% Similarity=0.053 Sum_probs=47.2
Q ss_pred ceEEEEECCCCCCCCCCCCCCCCCcc--c----HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH---------
Q 022316 75 NFCIYHINPPGHEFGAAAISDDEPVL--S----VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK--------- 139 (299)
Q Consensus 75 ~~~vi~~D~~G~G~S~~~~~~~~~~~--~----~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~--------- 139 (299)
+-++..+++|-....... ....| + ..++.+.|....+...-.+++|+|+|.|+.|+-.++..
T Consensus 35 g~~~~~V~YpA~~~~~~~---~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~ 111 (207)
T 1qoz_A 35 GTTSEAIVYPACGGQASC---GGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGIT 111 (207)
T ss_dssp TEEEEECCSCCCSSCGGG---TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBC
T ss_pred CCceEEeecccccccccc---CCccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCccccccc
Confidence 446788888875211000 00112 2 23444455555556666899999999999999877641
Q ss_pred -----cc----CcccEEEEecCCC
Q 022316 140 -----YR----HRVLGLILVSPLC 154 (299)
Q Consensus 140 -----~p----~~v~~lvl~~~~~ 154 (299)
.| ++|+++++++-+.
T Consensus 112 ~~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1qoz_A 112 NTAVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp CCSCCSCHHHHHHEEEEEEESCTT
T ss_pred CCCCCCChHHhccEEEEEEEcCCc
Confidence 12 4688888887644
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=95.25 E-value=0.045 Score=39.45 Aligned_cols=84 Identities=6% Similarity=0.080 Sum_probs=54.4
Q ss_pred hcccCceEEEEEC--CCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHcc----Cc
Q 022316 70 SLLLHNFCIYHIN--PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR----HR 143 (299)
Q Consensus 70 ~~l~~~~~vi~~D--~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p----~~ 143 (299)
..+.....|+.++ +|-.-... ........-..++....+....+...-.+++|+|+|.|+.++-..+...| ++
T Consensus 43 ~~~~~~v~v~~V~~~YpA~~~~~-~~~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~ 121 (187)
T 3qpd_A 43 LARSGDVACQGVGPRYTADLPSN-ALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDK 121 (187)
T ss_dssp HHSTTCEEEEECCSSCCCCGGGG-GSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHH
T ss_pred HHcCCCceEEeeCCcccCcCccc-cccccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhh
Confidence 3344457889988 77642100 00000111234555556666677778789999999999999988766544 57
Q ss_pred ccEEEEecCCC
Q 022316 144 VLGLILVSPLC 154 (299)
Q Consensus 144 v~~lvl~~~~~ 154 (299)
|.++++++-+.
T Consensus 122 V~avvlfGdP~ 132 (187)
T 3qpd_A 122 IKGVVLFGYTR 132 (187)
T ss_dssp EEEEEEESCTT
T ss_pred EEEEEEeeCCc
Confidence 99999988644
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.056 Score=39.74 Aligned_cols=55 Identities=16% Similarity=0.141 Sum_probs=40.6
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc--c----CcccEEEEecCCCC
Q 022316 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY--R----HRVLGLILVSPLCK 155 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~--p----~~v~~lvl~~~~~~ 155 (299)
-..++.+.|....+...-.+++|+|+|.|+.|+-.++... | ++|+++++++-+..
T Consensus 59 G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP~~ 119 (205)
T 2czq_A 59 GTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNPDH 119 (205)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCTTC
T ss_pred HHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCCCc
Confidence 3445555555556666678999999999999988876654 3 47999999985543
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.08 Score=41.41 Aligned_cols=81 Identities=17% Similarity=0.201 Sum_probs=50.7
Q ss_pred CceEEEEECCCCCCCCCCCCCCCCCcc--c----HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH--------
Q 022316 74 HNFCIYHINPPGHEFGAAAISDDEPVL--S----VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-------- 139 (299)
Q Consensus 74 ~~~~vi~~D~~G~G~S~~~~~~~~~~~--~----~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~-------- 139 (299)
....++.+++|-.-...... .....| + ..++.+.|....+...-.+++|+|+|-|+.|+-.++..
T Consensus 83 ~~v~v~~V~YPA~~~~~~~~-~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~ 161 (302)
T 3aja_A 83 DRLQVYTTPYTAQFHNPFAA-DKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPV 161 (302)
T ss_dssp TTEEEEECCCCCCCCCTTTT-CCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSS
T ss_pred CcceEEeccccccccccccc-cccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCC
Confidence 45678888887763210000 000011 2 23444555555566666899999999999999877643
Q ss_pred ccCcccEEEEecCCCC
Q 022316 140 YRHRVLGLILVSPLCK 155 (299)
Q Consensus 140 ~p~~v~~lvl~~~~~~ 155 (299)
-+++|+++++++-+..
T Consensus 162 ~~~~V~aVvLfGdP~r 177 (302)
T 3aja_A 162 DEDLVLGVTLIADGRR 177 (302)
T ss_dssp CGGGEEEEEEESCTTC
T ss_pred ChHHEEEEEEEeCCCC
Confidence 2468999999986544
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=94.35 E-value=0.037 Score=44.41 Aligned_cols=22 Identities=14% Similarity=0.226 Sum_probs=19.1
Q ss_pred CCcEEEEeeCccHHHHHHHHHH
Q 022316 118 LGAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 118 ~~~~~lvG~S~Gg~va~~~a~~ 139 (299)
..++++.|||+||++|..+|..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 3679999999999999988775
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=92.91 E-value=0.011 Score=48.39 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHc
Q 022316 105 LADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 105 ~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
+.+.|..+++.... .++++.|||+||++|..+|...
T Consensus 212 Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 212 VLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 34445555555433 4689999999999999887643
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=93.12 E-value=0.15 Score=35.57 Aligned_cols=55 Identities=18% Similarity=0.126 Sum_probs=38.8
Q ss_pred cccEEEEecCCCcch--hhhHHHhhhcc----------------------ccCceEEEEcCchhhhHhHHH----HHHHH
Q 022316 242 QCRSLIFVGESSPFH--SEAVHMTSKID----------------------RRYSALVEVWTRVYISLLGFL----VLLAS 293 (299)
Q Consensus 242 ~~P~lii~G~~D~~~--~~~~~~~~~~~----------------------~~~~~~~~~~~~~H~~~~~f~----~~~~~ 293 (299)
.+++||..|+.|.++ ...+...+.++ .++.++..+.++||.+..+-+ +.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 579999999999997 34444444442 124788999999999987654 44555
Q ss_pred hhh
Q 022316 294 FCE 296 (299)
Q Consensus 294 ~~~ 296 (299)
|+.
T Consensus 144 fl~ 146 (153)
T 1whs_B 144 FLQ 146 (153)
T ss_dssp HHH
T ss_pred HHC
Confidence 554
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=91.56 E-value=0.34 Score=33.79 Aligned_cols=57 Identities=7% Similarity=0.067 Sum_probs=37.7
Q ss_pred ccccEEEEecCCCcch--hhhHHHhhhcc---------------------------ccCceEEEEcCchhhhHhHHHH--
Q 022316 241 LQCRSLIFVGESSPFH--SEAVHMTSKID---------------------------RRYSALVEVWTRVYISLLGFLV-- 289 (299)
Q Consensus 241 i~~P~lii~G~~D~~~--~~~~~~~~~~~---------------------------~~~~~~~~~~~~~H~~~~~f~~-- 289 (299)
-.++||+..|+.|.++ -..+...+.+. .++.+++.+.++||.+..+-++
T Consensus 62 ~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~a 141 (155)
T 4az3_B 62 QKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAA 141 (155)
T ss_dssp CCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHH
T ss_pred cCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHH
Confidence 3579999999999997 22333322221 1336789999999999876554
Q ss_pred --HHHHhhhh
Q 022316 290 --LLASFCES 297 (299)
Q Consensus 290 --~~~~~~~~ 297 (299)
.+.+|+..
T Consensus 142 l~m~~~fl~g 151 (155)
T 4az3_B 142 FTMFSRFLNK 151 (155)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 45566543
|
| >3ho6_A Toxin A; inositol phosphate, enterotoxin; HET: IHP; 1.60A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=83.88 E-value=1.7 Score=32.72 Aligned_cols=39 Identities=26% Similarity=0.350 Sum_probs=27.7
Q ss_pred EEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 79 i~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
+.+-+-|||+.... ......++.++++..+..+.+.++.
T Consensus 106 lRWqlVGHGr~e~n-~~tlaG~sa~~LA~~L~~f~~~~~~ 144 (267)
T 3ho6_A 106 VKVTFIGHGKDEFN-TSEFARLSVDSLSNEISSFLDTIKL 144 (267)
T ss_dssp EEEEEECCCCSSCC-SSCBTTBCHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEeCCCCCCC-ccccCCCCHHHHHHHHHHHHHHhhc
Confidence 44556699987332 2334568999999999999887754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 299 | ||||
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 4e-04 |
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 38.5 bits (88), Expect = 4e-04
Identities = 16/143 (11%), Positives = 37/143 (25%), Gaps = 8/143 (5%)
Query: 38 GDQDKPALVT---YPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94
G + + L + + P A + E
Sbjct: 19 GKESRECLFLLHGSGVDETTLVPLAR--RIAPTATLVAARGRIPQEDGFRWFERIDPTRF 76
Query: 95 DDEPVL-SVDDLADQIAEVLNHFGLGA--VMCMGVTAGAYILTLFAMKYRHRVLGLILVS 151
+ + +L A E GL +G + GA +++ + + V L+
Sbjct: 77 EQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLR 136
Query: 152 PLCKAPSWTEWLYNKVMSNLLYY 174
P+ + + ++
Sbjct: 137 PMPVLDHVPATDLAGIRTLIIAG 159
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.97 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.97 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.97 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.96 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.95 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.95 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.95 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.94 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.93 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.92 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.91 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.91 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.9 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.89 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.88 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.88 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.87 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.87 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.86 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.86 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.85 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.83 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.81 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.79 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.78 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.78 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.77 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.76 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.75 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.75 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.74 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.74 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.74 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.73 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.69 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.69 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.68 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.57 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.56 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.54 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.52 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.51 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.49 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.48 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.43 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.33 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.33 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.3 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.29 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.24 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.14 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.13 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.12 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.08 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.04 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.04 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.95 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.85 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.82 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.5 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.49 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.24 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.24 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.21 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.56 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.55 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 97.25 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 97.16 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.13 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 97.12 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.11 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 97.06 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.89 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.81 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.8 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.78 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.73 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 96.68 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.65 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 96.56 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 96.45 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 95.68 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 95.58 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 93.92 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 93.21 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=5e-37 Score=243.86 Aligned_cols=262 Identities=15% Similarity=0.125 Sum_probs=171.7
Q ss_pred cceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchh-hhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~-~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
++.+++.+.+|+|..+|++++|+|||+||++.+... |.+.+ ..++.+||+|+++|+||||+|...... ...+
T Consensus 2 e~~~~~g~~~i~y~~~G~~~~p~vvl~HG~~~~~~~------~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~ 74 (297)
T d1q0ra_ 2 ERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALG------WPDEFARRLADGGLHVIRYDHRDTGRSTTRDFA-AHPY 74 (297)
T ss_dssp EEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGG------SCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTT-TSCC
T ss_pred CeEEEECCEEEEEEEecCCCCCEEEEECCCCcChhH------HHHHHHHHHHhCCCEEEEEeCCCCccccccccc-cccc
Confidence 578889999999999999899999999999888744 65544 445567999999999999999643322 2347
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhh-----------
Q 022316 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS----------- 169 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~----------- 169 (299)
+++++++|+..++++++.++++++||||||.+++.+|.++|++|+++|++++.................
T Consensus 75 ~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (297)
T d1q0ra_ 75 GFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQ 154 (297)
T ss_dssp CHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCC
T ss_pred ccchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999876654332211110000
Q ss_pred -----hh--HHhhcc--hhHHHHH-HHHhhhccccccCCCCCchHHHHHH-HHhhhc---ccccchHHHHHhhcCCCChh
Q 022316 170 -----NL--LYYYGM--CGVVKEL-LLKRYFSKEVRGNAQVPESDIVQAC-RRLLDE---RQSSNVWHFLEAINGRPDIS 235 (299)
Q Consensus 170 -----~~--~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~ 235 (299)
.. ...... ....... .....+....... ........ ...... ........ ........+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 229 (297)
T d1q0ra_ 155 QPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPF----DDAEYARWEERAIDHAGGVLAEPYAH-YSLTLPPPSRA 229 (297)
T ss_dssp HHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCC----CHHHHHHHHHHHHHHTTTCCSCCCGG-GGCCCCCGGGG
T ss_pred HHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccc----hHHHHHHHHHHhhhhccccchhhhhh-hhhhhccccch
Confidence 00 000000 0000000 0000111100000 11111111 111111 11111111 11111224555
Q ss_pred hhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 236 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 236 ~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
..+++|++||++|+|++|.++ +.++.+.+.+++ ++++++|++||.+..|-++.++.++.+
T Consensus 230 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~~ 291 (297)
T d1q0ra_ 230 AELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPT--ARLAEIPGMGHALPSSVHGPLAEVILA 291 (297)
T ss_dssp GGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTT--EEEEEETTCCSSCCGGGHHHHHHHHHH
T ss_pred hhhhccCCceEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEECCCCCcchhhCHHHHHHHHHH
Confidence 678899999999999999998 567777888865 889999999999888876666555443
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=7.2e-36 Score=236.43 Aligned_cols=270 Identities=11% Similarity=0.102 Sum_probs=173.5
Q ss_pred CCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
.+.+.+.+++++.+|+|...| ++|+|||+||++.++.. | ..+...|.++|+|+++|+||||.|+.......
T Consensus 6 ~~~~~~~~~~~~~~l~y~~~G--~gp~vv~lHG~~~~~~~------~-~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~ 76 (293)
T d1ehya_ 6 EDFKHYEVQLPDVKIHYVREG--AGPTLLLLHGWPGFWWE------W-SKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDL 76 (293)
T ss_dssp GGSCEEEEECSSCEEEEEEEE--CSSEEEEECCSSCCGGG------G-HHHHHHHHTTSEEEEECCTTSTTSCCCCTTCG
T ss_pred CCCcceEEEECCEEEEEEEEC--CCCeEEEECCCCCCHHH------H-HHHHHHHhcCCEEEEecCCcccCCcccccccc
Confidence 345667899999999999999 68999999999988744 6 44466678899999999999999876544444
Q ss_pred CcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH---------HHHh-hh
Q 022316 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---------WLYN-KV 167 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------~~~~-~~ 167 (299)
..++++++++++.++++++++++++++||||||.+|+.+|.++|+++.++|++++......... +... ..
T Consensus 77 ~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (293)
T d1ehya_ 77 SKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQ 156 (293)
T ss_dssp GGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTT
T ss_pred ccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhc
Confidence 5678999999999999999999999999999999999999999999999999998654321110 0000 00
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhcC-CCC--hhhhhccccc
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAING-RPD--ISEGLRKLQC 243 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~--~~~~~~~i~~ 243 (299)
........+.........+..++....... .....+..+.+....... ........+..... ... .......+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T d1ehya_ 157 LDMAVEVVGSSREVCKKYFKHFFDHWSYRD-ELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDL 235 (293)
T ss_dssp CHHHHHHHTSCHHHHHHHHHHHHHHTSSSS-CCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCS
T ss_pred cchhhhhhccchhHHHHHHHHhhhhccccc-ccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccCC
Confidence 000000011111111112222222111111 001233333333222211 11111112222111 111 1123456899
Q ss_pred cEEEEecCCCcch--hhhHHHhh-hccccCceEEEEcCchhhhHhHHHHHHHHhhhhcC
Q 022316 244 RSLIFVGESSPFH--SEAVHMTS-KIDRRYSALVEVWTRVYISLLGFLVLLASFCESEF 299 (299)
Q Consensus 244 P~lii~G~~D~~~--~~~~~~~~-~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~~ 299 (299)
|+++|+|++|.++ +...+..+ ..++ +++++++++||.++.|-++.++..++++|
T Consensus 236 Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ff 292 (293)
T d1ehya_ 236 PVTMIWGLGDTCVPYAPLIEFVPKYYSN--YTMETIEDCGHFLMVEKPEIAIDRIKTAF 292 (293)
T ss_dssp CEEEEEECCSSCCTTHHHHHHHHHHBSS--EEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred ceEEEEeCCCCCcCHHHHHHHHHHhCCC--CEEEEECCCCCchHHHCHHHHHHHHHHhh
Confidence 9999999999987 44444443 4443 89999999999999999998888888775
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=2e-36 Score=238.59 Aligned_cols=264 Identities=13% Similarity=0.105 Sum_probs=169.1
Q ss_pred CcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCC-CCCc
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DEPV 99 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-~~~~ 99 (299)
.++.++....+++|...|++++|+|||+||++.+.... ..|.+ +.+.|+++|+|+++|+||||.|+..... ....
T Consensus 5 ~~~~~~~~~~~~h~~~~G~~~~p~ivllHG~~~~~~~~---~~~~~-~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 80 (281)
T d1c4xa_ 5 IEKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAA---SNWRP-IIPDLAENFFVVAPDLIGFGQSEYPETYPGHIM 80 (281)
T ss_dssp EEEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHH---HHHGG-GHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHH
T ss_pred EEEEEccCCEEEEEEEEecCCCCEEEEECCCCCCCcHH---HHHHH-HHHHHhCCCEEEEEeCCCCccccccccccccch
Confidence 45667777789999999999999999999998765331 12533 3566778999999999999999754321 1223
Q ss_pred ccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchh
Q 022316 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
.+++++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++................ ....... ..
T Consensus 81 ~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~-~~~~~~~-~~ 158 (281)
T d1c4xa_ 81 SWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLL-AFYADPR-LT 158 (281)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHH-TGGGSCC-HH
T ss_pred hhHHHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHH-Hhhhhcc-cc
Confidence 567788999999999999999999999999999999999999999999999987554221111110111 1101111 11
Q ss_pred HHHHHHHHhhh-ccccccCCCCCchHHHHHHHHhhhccccc-chHHHHHhhc----CCCChhhhhccccccEEEEecCCC
Q 022316 180 VVKELLLKRYF-SKEVRGNAQVPESDIVQACRRLLDERQSS-NVWHFLEAIN----GRPDISEGLRKLQCRSLIFVGESS 253 (299)
Q Consensus 180 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~i~~P~lii~G~~D 253 (299)
.. ...+..+. .+..... .................. ........+. ........+.+|++|+|+|+|++|
T Consensus 159 ~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 233 (281)
T d1c4xa_ 159 PY-RELIHSFVYDPENFPG----MEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQD 233 (281)
T ss_dssp HH-HHHHHTTSSCSTTCTT----HHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTC
T ss_pred hh-hhhhhhhcccccccch----hhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCC
Confidence 11 11222221 1111100 112222111111111000 0111111111 112334567899999999999999
Q ss_pred cch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 254 PFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 254 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
.++ +..+.+.+.+++ ++++++|++||.++.|-++.++..+..
T Consensus 234 ~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~ 277 (281)
T d1c4xa_ 234 RIVPLDTSLYLTKHLKH--AELVVLDRCGHWAQLERWDAMGPMLME 277 (281)
T ss_dssp SSSCTHHHHHHHHHCSS--EEEEEESSCCSCHHHHSHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 987 667778887765 889999999999999877776654443
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=3.2e-36 Score=237.85 Aligned_cols=265 Identities=13% Similarity=0.121 Sum_probs=168.3
Q ss_pred CCcceeecCCceEEEEeccCCC-CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 20 GKDNLIKTSHGSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~-~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
+.+.++++++.+|+|+..|+++ +|+|||+||+++++.. |...+..++.+||+|+++|+||||+|+.+. ..
T Consensus 2 ~~~~~~~~~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~~------~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~---~~ 72 (290)
T d1mtza_ 2 CIENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHD------YLLSLRDMTKEGITVLFYDQFGCGRSEEPD---QS 72 (290)
T ss_dssp CEEEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSG------GGGGGGGGGGGTEEEEEECCTTSTTSCCCC---GG
T ss_pred CccCeEEECCEEEEEEEcCCCCCCCeEEEECCCCCchHH------HHHHHHHHHHCCCEEEEEeCCCCccccccc---cc
Confidence 4567899999999999999754 5789999998766543 335666777889999999999999997532 34
Q ss_pred cccHHHHHHHHHHHHHhc-CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHh----------hh
Q 022316 99 VLSVDDLADQIAEVLNHF-GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN----------KV 167 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l-~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~----------~~ 167 (299)
.++++++++|+.++++++ +.++++|+||||||.+++.+|.++|++|+++|++++....+........ ..
T Consensus 73 ~~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (290)
T d1mtza_ 73 KFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDA 152 (290)
T ss_dssp GCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHH
T ss_pred cccccchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhHHHHHH
Confidence 589999999999999987 6899999999999999999999999999999999987654322211100 00
Q ss_pred hhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-----cccchHHHHHhhcCCCChhhhhcccc
Q 022316 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-----QSSNVWHFLEAINGRPDISEGLRKLQ 242 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~ 242 (299)
.............................. ....++............ ........ .......+....+++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 230 (290)
T d1mtza_ 153 IKKYGSSGSYENPEYQEAVNYFYHQHLLRS-EDWPPEVLKSLEYAERRNVYRIMNGPNEFTI-TGTIKDWDITDKISAIK 230 (290)
T ss_dssp HHHHHHHTCTTCHHHHHHHHHHHHHHTSCS-SCCCHHHHHHHHHHHHSSHHHHHTCSBTTBC-CSTTTTCBCTTTGGGCC
T ss_pred HHHhhhhccccchhHHHHHHHHhhhhhccc-ccchHHHHHHHHHHhhhhhhhhhcchhHHhH-hhhhhcccHHHHhhccc
Confidence 000000000000000001111111111000 000122222211111100 00000000 00111234556688899
Q ss_pred ccEEEEecCCCcch-hhhHHHhhhccccCceEEEEcCchhhhHhHHHHH----HHHhhhh
Q 022316 243 CRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVL----LASFCES 297 (299)
Q Consensus 243 ~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~----~~~~~~~ 297 (299)
+|+++|+|++|.++ +.+..+.+.+++ +++++++++||.++.|.++. +.+|+++
T Consensus 231 ~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 288 (290)
T d1mtza_ 231 IPTLITVGEYDEVTPNVARVIHEKIAG--SELHVFRDCSHLTMWEDREGYNKLLSDFILK 288 (290)
T ss_dssp SCEEEEEETTCSSCHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred ceEEEEEeCCCCCCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHHH
Confidence 99999999999987 556677777765 88999999999999875555 4456654
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=6.5e-36 Score=236.54 Aligned_cols=258 Identities=12% Similarity=0.090 Sum_probs=171.5
Q ss_pred CCCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 17 PPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 17 ~~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
.++.+++++++++.+|+|...|++++|+|||+||++.++.. |.+. .+.|+++|+|+++|+||||+|+.+.
T Consensus 4 ~~p~~~~~i~~~g~~i~y~~~G~~~~p~lvllHG~~~~~~~------~~~~-~~~L~~~~~vi~~d~~G~G~S~~~~--- 73 (291)
T d1bn7a_ 4 GFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYL------WRNI-IPHVAPSHRCIAPDLIGMGKSDKPD--- 73 (291)
T ss_dssp CCCCCCEEEEETTEEEEEEEESCSSSSCEEEECCTTCCGGG------GTTT-HHHHTTTSCEEEECCTTSTTSCCCS---
T ss_pred CCCCCCeEEEECCEEEEEEEeCCCCCCeEEEECCCCCCHHH------HHHH-HHHHhcCCEEEEEeCCCCccccccc---
Confidence 34566789999999999999998889999999999988755 6444 5667889999999999999996532
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhh-hhhhhHHhh
Q 022316 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK-VMSNLLYYY 175 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~ 175 (299)
..++.+++++++.+++++++.++++|+||||||.+++.+|.++|+++++++++++.........+.... .....+...
T Consensus 74 -~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (291)
T d1bn7a_ 74 -LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTA 152 (291)
T ss_dssp -CCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTST
T ss_pred -cccchhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhh
Confidence 358999999999999999999999999999999999999999999999999998766543222111000 000000000
Q ss_pred --------cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcc-cccchHHHHHhhcCCC----------Chhh
Q 022316 176 --------GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRP----------DISE 236 (299)
Q Consensus 176 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~ 236 (299)
...... ............ .......+....... ................ +...
T Consensus 153 ~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (291)
T d1bn7a_ 153 DVGRELIIDQNAFI-EGVLPKCVVRPL-------TEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMN 224 (291)
T ss_dssp THHHHHHTTSCHHH-HTHHHHTCSSCC-------CHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHH
T ss_pred hhHHHhhhhhhhhH-Hhhhhhhccccc-------hHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhh
Confidence 000000 001111111000 123333333222211 1111222222111111 1223
Q ss_pred hhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 237 GLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 237 ~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
.+.++++|+++|+|++|.++ +....+.+.+++ +++++++++||.++.|.++.++..+
T Consensus 225 ~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~v~~~i 283 (291)
T d1bn7a_ 225 WLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPN--CKTVDIGPGLHYLQEDNPDLIGSEI 283 (291)
T ss_dssp HHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCGGGTCHHHHHHHH
T ss_pred hhhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHH
Confidence 46789999999999999997 667777777765 8899999999999987665554433
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=1.4e-35 Score=231.87 Aligned_cols=255 Identities=13% Similarity=0.060 Sum_probs=166.5
Q ss_pred CcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
.+++++++|.+++|...| ++|+|||+||++.+..+. ..| ..+...|+++|+|+++|+||||.|+.+. ...
T Consensus 3 ~~~~~~~dg~~l~y~~~G--~g~~vvllHG~~~~~~~~---~~~-~~~~~~l~~~~~v~~~D~~G~G~S~~~~----~~~ 72 (268)
T d1j1ia_ 3 VERFVNAGGVETRYLEAG--KGQPVILIHGGGAGAESE---GNW-RNVIPILARHYRVIAMDMLGFGKTAKPD----IEY 72 (268)
T ss_dssp EEEEEEETTEEEEEEEEC--CSSEEEEECCCSTTCCHH---HHH-TTTHHHHTTTSEEEEECCTTSTTSCCCS----SCC
T ss_pred cCeEEEECCEEEEEEEEc--CCCeEEEECCCCCCccHH---HHH-HHHHHHHhcCCEEEEEcccccccccCCc----ccc
Confidence 357889998999999999 578999999998765331 125 3345667889999999999999996532 357
Q ss_pred cHHHHHHHHHHHHHhcCC-CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchh
Q 022316 101 SVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
+.+++++++.++++.++. ++++++||||||.+++.+|.++|++|+++|+++++............. .. .....
T Consensus 73 ~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~-----~~-~~~~~ 146 (268)
T d1j1ia_ 73 TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPI-----IN-YDFTR 146 (268)
T ss_dssp CHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------------CCSCH
T ss_pred ccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhh-----hh-hhhhh
Confidence 899999999999999998 478999999999999999999999999999999876554332211100 00 01111
Q ss_pred HHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchH---HHHHhhcCCCChhhhhccccccEEEEecCCCcch
Q 022316 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVW---HFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~ 256 (299)
.................. .......+............. .............+.+.++++|+++|+|++|.++
T Consensus 147 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~ 222 (268)
T d1j1ia_ 147 EGMVHLVKALTNDGFKID----DAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVV 222 (268)
T ss_dssp HHHHHHHHHHSCTTCCCC----HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred hhhHHHHHHHhhhhhhhh----hhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCC
Confidence 110111222222111111 111111111111111111111 1111122223445668899999999999999997
Q ss_pred --hhhHHHhhhccccCceEEEEcCchhhhHhHH----HHHHHHhhhh
Q 022316 257 --SEAVHMTSKIDRRYSALVEVWTRVYISLLGF----LVLLASFCES 297 (299)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f----~~~~~~~~~~ 297 (299)
+....+.+.+++ ++++++|++||.++.|- .+.+.+|+++
T Consensus 223 ~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 223 PVETAYKFLDLIDD--SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp CHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 667777777765 89999999999998874 4555566654
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=8.5e-35 Score=227.80 Aligned_cols=248 Identities=13% Similarity=0.098 Sum_probs=165.0
Q ss_pred ceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccH
Q 022316 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (299)
+.|.++|.+++|+..| ++|||||+||++.+.... ..|.+ +.+.|+++|+|+++|+||||.|..+. ...++.
T Consensus 6 ~~i~~~G~~~~Y~~~G--~G~pvvllHG~~~~~~~~---~~~~~-~~~~l~~~~~vi~~Dl~G~G~S~~~~---~~~~~~ 76 (271)
T d1uk8a_ 6 KSILAAGVLTNYHDVG--EGQPVILIHGSGPGVSAY---ANWRL-TIPALSKFYRVIAPDMVGFGFTDRPE---NYNYSK 76 (271)
T ss_dssp EEEEETTEEEEEEEEC--CSSEEEEECCCSTTCCHH---HHHTT-THHHHTTTSEEEEECCTTSTTSCCCT---TCCCCH
T ss_pred CEEEECCEEEEEEEEe--eCCeEEEECCCCCCccHH---HHHHH-HHHHHhCCCEEEEEeCCCCCCccccc---cccccc
Confidence 4788899999999999 578999999998765432 11433 35667789999999999999997532 235789
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHH
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
+++++++..+++.++.++++|+||||||.+++.+|.++|++++++|++++............... .........
T Consensus 77 ~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~-----~~~~~~~~~- 150 (271)
T d1uk8a_ 77 DSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVW-----GYTPSIENM- 150 (271)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHH-----TCCSCHHHH-
T ss_pred cccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhh-----hccchhHHH-
Confidence 99999999999999999999999999999999999999999999999998765433222110000 000001111
Q ss_pred HHHHHhhhccccccCCCCCchHHHHHHHHh---------hhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCC
Q 022316 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRL---------LDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D 253 (299)
......+....... ........... ................ ....+.+.++++|+|+|+|++|
T Consensus 151 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~P~lii~G~~D 222 (271)
T d1uk8a_ 151 RNLLDIFAYDRSLV-----TDELARLRYEASIQPGFQESFSSMFPEPRQRWIDAL---ASSDEDIKTLPNETLIIHGRED 222 (271)
T ss_dssp HHHHHHHCSCGGGC-----CHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHH---CCCHHHHTTCCSCEEEEEETTC
T ss_pred HHHHHHHhhhcccc-----hhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhc---cccHHHHHhhccceeEEecCCC
Confidence 11111111111100 11111111111 1111111111222222 2344668899999999999999
Q ss_pred cch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 254 PFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 254 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
.++ +....+.+.+++ ++++++|++||.++.|.++.++.-+
T Consensus 223 ~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i 264 (271)
T d1uk8a_ 223 QVVPLSSSLRLGELIDR--AQLHVFGRCGHWTQIEQTDRFNRLV 264 (271)
T ss_dssp SSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHTHHHHHHHH
T ss_pred CCcCHHHHHHHHHhCCC--CEEEEECCCCCchHHHCHHHHHHHH
Confidence 997 667777777765 8899999999999988776665443
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=4.1e-35 Score=229.95 Aligned_cols=256 Identities=13% Similarity=0.104 Sum_probs=163.4
Q ss_pred eeecCC-ceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccH
Q 022316 24 LIKTSH-GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (299)
Q Consensus 24 ~i~~~~-~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (299)
+|++.+ .+|+|+.+|++++|+|||+||++.++.. |...+..++++||+|+++|+||||.|..+. ..+++
T Consensus 2 ~i~~~dG~~l~y~~~G~~~~~~vv~lHG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~----~~~~~ 71 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADD------WDNQMLFFLSHGYRVIAHDRRGHGRSDQPS----TGHDM 71 (275)
T ss_dssp EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCCS----SCCSH
T ss_pred EEEecCCCEEEEEEecCCCCCeEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEEeccccccccccc----ccccc
Confidence 456644 5899999999889999999999988755 655555666789999999999999986432 35899
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCc-cHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH----hhhhhhhH--Hhh
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTA-GAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY----NKVMSNLL--YYY 175 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~-Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~----~~~~~~~~--~~~ 175 (299)
+++++|+.++++.++.++++++|||+ ||.+++.+|.++|++|+++|++++.+.......+.. ........ ...
T Consensus 72 ~~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (275)
T d1a88a_ 72 DTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAA 151 (275)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhh
Confidence 99999999999999999999999997 666777888999999999999997654321111000 00000000 000
Q ss_pred cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcc
Q 022316 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 255 (299)
.............++.... ..........+....................+.. .+..+.+++|++|+++|+|++|.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~l~i~G~~D~~ 228 (275)
T d1a88a_ 152 NRAQFYIDVPSGPFYGFNR--EGATVSQGLIDHWWLQGMMGAANAHYECIAAFSE-TDFTDDLKRIDVPVLVAHGTDDQV 228 (275)
T ss_dssp CHHHHHHHHHHTTTTTTTS--TTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHHCCSCEEEEEETTCSS
T ss_pred hhHHHHHhhhhhhhhhccc--chhhHHHHHHHHHHHhhcccchHHHHHHHHHhhh-hhhhHHHHhhccccceeecCCCCC
Confidence 0011111111111111110 0001122233222222222222223333333322 566677889999999999999999
Q ss_pred h--hhh-HHHhhhccccCceEEEEcCchhhhHhHHHHHHHHh
Q 022316 256 H--SEA-VHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASF 294 (299)
Q Consensus 256 ~--~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~ 294 (299)
+ +.. +.+.+.+++ +++++++++||.++.|-++.++.-
T Consensus 229 ~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~ 268 (275)
T d1a88a_ 229 VPYADAAPKSAELLAN--ATLKSYEGLPHGMLSTHPEVLNPD 268 (275)
T ss_dssp SCSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHCHHHHHHH
T ss_pred cCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHH
Confidence 7 333 444455544 889999999999998766555433
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=1.6e-35 Score=233.60 Aligned_cols=250 Identities=12% Similarity=0.103 Sum_probs=162.7
Q ss_pred ceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHH
Q 022316 30 GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (299)
Q Consensus 30 ~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 109 (299)
.+|+|+..| ++|+|||+||++.+..... .++ ..+..++.+||+|+++|+||||.|..+. ...++..++++++
T Consensus 20 ~~i~y~~~G--~G~~ivllHG~~~~~~~~~--~~~-~~l~~~~~~g~~v~~~D~~G~G~S~~~~---~~~~~~~~~~~~i 91 (283)
T d2rhwa1 20 FNIHYNEAG--NGETVIMLHGGGPGAGGWS--NYY-RNVGPFVDAGYRVILKDSPGFNKSDAVV---MDEQRGLVNARAV 91 (283)
T ss_dssp EEEEEEEEC--CSSEEEEECCCSTTCCHHH--HHT-TTHHHHHHTTCEEEEECCTTSTTSCCCC---CSSCHHHHHHHHH
T ss_pred EEEEEEEEc--CCCeEEEECCCCCChhHHH--HHH-HHHHHHHHCCCEEEEEeCCCCccccccc---ccccccchhhhhc
Confidence 478999999 6789999999988765411 111 3345667889999999999999996532 2346778889999
Q ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH---HHHhhhhhhhHHhhcchhHHHHHHH
Q 022316 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---WLYNKVMSNLLYYYGMCGVVKELLL 186 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (299)
.++++++++++++++||||||.+++.+|.++|++|+++|+++|....+.... ............ ....... ....
T Consensus 92 ~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 169 (283)
T d2rhwa1 92 KGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYA-EPSYETL-KQML 169 (283)
T ss_dssp HHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHH-SCCHHHH-HHHH
T ss_pred ccccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhh-hhhhhhH-HHHH
Confidence 9999999999999999999999999999999999999999998654432111 000011111111 1111111 1122
Q ss_pred HhhhccccccCCCCCchHHHHHHHHhhhccccc---chHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHH
Q 022316 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSS---NVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 261 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~ 261 (299)
..++...... .++............... .............+....+.+|++|+++|+|++|.++ +.+..
T Consensus 170 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~ 244 (283)
T d2rhwa1 170 QVFLYDQSLI-----TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLK 244 (283)
T ss_dssp HHHCSCGGGC-----CHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHH
T ss_pred HHhhcccccC-----cHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHH
Confidence 2222222111 233333222222221111 1111111112224566778899999999999999997 66777
Q ss_pred HhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 262 MTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
+.+.+++ +++++++++||.++.|.++.++..+.
T Consensus 245 ~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~ 277 (283)
T d2rhwa1 245 LLWNIDD--ARLHVFSKCGHWAQWEHADEFNRLVI 277 (283)
T ss_dssp HHHHSSS--EEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred HHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHH
Confidence 7777754 89999999999999887666554443
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=3.4e-35 Score=230.35 Aligned_cols=257 Identities=15% Similarity=0.119 Sum_probs=164.1
Q ss_pred eeecCCc-eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccH
Q 022316 24 LIKTSHG-SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (299)
Q Consensus 24 ~i~~~~~-~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (299)
++++.+| +|+|+..| ++|+|||+||++.++.. |...+..++.+||+|+++|+||||.|+.+. ..++.
T Consensus 2 ~~~t~dG~~l~y~~~G--~g~~ivlvHG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~~~ 69 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWG--QGRPVVFIHGWPLNGDA------WQDQLKAVVDAGYRGIAHDRRGHGHSTPVW----DGYDF 69 (274)
T ss_dssp EEECTTSCEEEEEEEC--SSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCCS----SCCSH
T ss_pred eEECcCCCEEEEEEEC--CCCeEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEEeCCCCccccccc----ccccc
Confidence 4677655 99999999 57899999999888744 655555566789999999999999996532 35889
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH-ccCcccEEEEecCCCCCcchhHHH----HhhhhhhhHHh-hc
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWL----YNKVMSNLLYY-YG 176 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~~~-~~ 176 (299)
.++++|+.++++.++.++++++||||||.+++.++++ .|++|++++++++.+......... ........... ..
T Consensus 70 ~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (274)
T d1a8qa_ 70 DTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLT 149 (274)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhh
Confidence 9999999999999999999999999999999987665 488999999999765432111000 00000000000 00
Q ss_pred chhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch
Q 022316 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~ 256 (299)
............++........ ........+..................+.. .+..+.+++|++|+++|+|++|.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~G~~D~~~ 226 (274)
T d1a8qa_ 150 ERSQFWKDTAEGFFSANRPGNK--VTQGNKDAFWYMAMAQTIEGGVRCVDAFGY-TDFTEDLKKFDIPTLVVHGDDDQVV 226 (274)
T ss_dssp HHHHHHHHHHHHHTTTTSTTCC--CCHHHHHHHHHHHTTSCHHHHHHHHHHHHH-CCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred hhHHHhhhhhhhhhhccccchh--hhhhHHHHHHHhhhccchhhhhhHHHHhhc-cchHHHHHhccceeeeeccCCCCCc
Confidence 0000011122333332221110 012222222222222222223333333322 4566778999999999999999987
Q ss_pred --hhh-HHHhhhccccCceEEEEcCchhhhHh------HHHHHHHHhhhh
Q 022316 257 --SEA-VHMTSKIDRRYSALVEVWTRVYISLL------GFLVLLASFCES 297 (299)
Q Consensus 257 --~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~------~f~~~~~~~~~~ 297 (299)
+.. +.+.+.+++ +++++++++||.+.. +|.+.+..|+++
T Consensus 227 ~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 227 PIDATGRKSAQIIPN--AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp CGGGTHHHHHHHSTT--CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCCC--CEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 333 445555654 899999999997653 455666777764
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=3.2e-34 Score=229.46 Aligned_cols=130 Identities=14% Similarity=0.069 Sum_probs=111.8
Q ss_pred CCCcceeecCCc-eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHG-SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 19 ~~~~~~i~~~~~-~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
+.+++++++++| +|+|+..|++++|||||+||+++++.. | ......+.++|+|+++|+||||.|+.+. ..
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G~~~g~pvvllHG~~g~~~~------~-~~~~~~l~~~~~Vi~~D~rG~G~S~~~~--~~ 80 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCN------D-KMRRFHDPAKYRIVLFDQRGSGRSTPHA--DL 80 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCC------G-GGGGGSCTTTEEEEEECCTTSTTSBSTT--CC
T ss_pred CCCCCEEEeCCCcEEEEEEecCCCCCEEEEECCCCCCccc------h-HHHhHHhhcCCEEEEEeccccCCCCccc--cc
Confidence 457789999766 899999998889999999999876533 4 2335566789999999999999997542 24
Q ss_pred CcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
..++++++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++.....
T Consensus 81 ~~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~ 140 (313)
T d1azwa_ 81 VDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRR 140 (313)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCH
T ss_pred cchhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccc
Confidence 458999999999999999999999999999999999999999999999999999877654
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=3.2e-34 Score=225.37 Aligned_cols=251 Identities=14% Similarity=0.090 Sum_probs=154.9
Q ss_pred eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH
Q 022316 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (299)
Q Consensus 31 ~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~ 110 (299)
+|+|...| ++|+|||+||++.++.. |...+..++.++|+|+++|+||||.|+.+. ..++++++++|+.
T Consensus 14 ~i~y~~~G--~g~~illlHG~~~~~~~------~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~----~~~~~~~~~~di~ 81 (279)
T d1hkha_ 14 ELYYEDQG--SGQPVVLIHGYPLDGHS------WERQTRELLAQGYRVITYDRRGFGGSSKVN----TGYDYDTFAADLH 81 (279)
T ss_dssp EEEEEEES--SSEEEEEECCTTCCGGG------GHHHHHHHHHTTEEEEEECCTTSTTSCCCS----SCCSHHHHHHHHH
T ss_pred EEEEEEEc--cCCeEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEEechhhCCccccc----cccchhhhhhhhh
Confidence 88999999 57899999999988754 655655667889999999999999996432 3589999999999
Q ss_pred HHHHhcCCCcEEEEeeCccH-HHHHHHHHHccCcccEEEEecCCCCCcchhH----HHHhhhhhhhH--HhhcchhHHHH
Q 022316 111 EVLNHFGLGAVMCMGVTAGA-YILTLFAMKYRHRVLGLILVSPLCKAPSWTE----WLYNKVMSNLL--YYYGMCGVVKE 183 (299)
Q Consensus 111 ~~l~~l~~~~~~lvG~S~Gg-~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~ 183 (299)
++++++++++++|+|||||| .++..+|.++|++|++++++++......... ........... ...........
T Consensus 82 ~~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (279)
T d1hkha_ 82 TVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTD 161 (279)
T ss_dssp HHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHH
T ss_pred hhhhhcCcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhh
Confidence 99999999999999999996 5666677788999999999987654321110 00000000000 00000001101
Q ss_pred HHHHhhhccccccCCCCCchHHHHHH-HHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--h-hh
Q 022316 184 LLLKRYFSKEVRGNAQVPESDIVQAC-RRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S-EA 259 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~-~~ 259 (299)
....+........ ....+...... ...........+...........+..+.++++++|+++|+|++|.++ + ..
T Consensus 162 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 239 (279)
T d1hkha_ 162 -FYKNFYNLDENLG-SRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATA 239 (279)
T ss_dssp -HHHHHHTHHHHBT-TTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTH
T ss_pred -hhhhhcccchhhh-hhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHHH
Confidence 1111111100000 00012222222 22222222222222222221112233456778999999999999987 3 34
Q ss_pred HHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 260 VHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
+.+.+.+++ ++++++|++||.++.|-+++++..+.+
T Consensus 240 ~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~v~~~i~~ 275 (279)
T d1hkha_ 240 RRFHQAVPE--ADYVEVEGAPHGLLWTHADEVNAALKT 275 (279)
T ss_dssp HHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred HHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 555666654 889999999999998877666544443
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-34 Score=232.58 Aligned_cols=266 Identities=13% Similarity=0.111 Sum_probs=166.1
Q ss_pred CCCCcceeecCCc-eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 18 PSGKDNLIKTSHG-SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 18 ~~~~~~~i~~~~~-~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
......++++++| +|+|+..| ++|+|||+||++.++.. |...+..+..+||+|+++|+||||+|..+ ..
T Consensus 9 ~~~~~~~v~~~~g~~i~y~~~G--~gp~vlllHG~~~~~~~------~~~~~~~L~~~g~~vi~~D~~G~G~S~~~--~~ 78 (322)
T d1zd3a2 9 SDMSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYS------WRYQIPALAQAGYRVLAMDMKGYGESSAP--PE 78 (322)
T ss_dssp GGSEEEEEEEETTEEEEEEEEC--CSSEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEEEECTTSTTSCCC--SC
T ss_pred CCCceeEEEECCCCEEEEEEEc--CCCeEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEeccccccccccc--cc
Confidence 3556678888644 89999999 67999999999888754 75555555467999999999999999653 22
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh-----HHHHhhhhh--
Q 022316 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT-----EWLYNKVMS-- 169 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~-----~~~~~~~~~-- 169 (299)
...++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|+++++....... .........
T Consensus 79 ~~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (322)
T d1zd3a2 79 IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQ 158 (322)
T ss_dssp GGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHH
T ss_pred cccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhH
Confidence 3458999999999999999999999999999999999999999999999999999765432111 000000000
Q ss_pred hhHHhhcchhHHH----HHHHHhhhcccccc----------------------CCCCCchHHHHHHHHhhhcccccchHH
Q 022316 170 NLLYYYGMCGVVK----ELLLKRYFSKEVRG----------------------NAQVPESDIVQACRRLLDERQSSNVWH 223 (299)
Q Consensus 170 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (299)
............. ...+..++...... ............+...+.... +..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 235 (322)
T d1zd3a2 159 LYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSG---FRG 235 (322)
T ss_dssp HHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHT---THH
T ss_pred HhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcc---ccc
Confidence 0000000000000 00111111100000 000001222222222221111 111
Q ss_pred HHHhhcC-----CCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHH----HHHH
Q 022316 224 FLEAING-----RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFL----VLLA 292 (299)
Q Consensus 224 ~~~~~~~-----~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~----~~~~ 292 (299)
....+.. ..+......+|++||++|+|++|.++ +..+.+.+.+++ .++++++++||.++.|-+ +.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~v~~~i~ 313 (322)
T d1zd3a2 236 PLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH--LKRGHIEDCGHWTQMDKPTEVNQILI 313 (322)
T ss_dssp HHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTT--CEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred ccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHH
Confidence 1111100 01222345789999999999999997 555566666654 889999999999987644 4556
Q ss_pred Hhhhhc
Q 022316 293 SFCESE 298 (299)
Q Consensus 293 ~~~~~~ 298 (299)
.|+++.
T Consensus 314 ~FL~~~ 319 (322)
T d1zd3a2 314 KWLDSD 319 (322)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 787763
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=7.5e-34 Score=222.45 Aligned_cols=254 Identities=15% Similarity=0.115 Sum_probs=159.5
Q ss_pred ecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHH
Q 022316 26 KTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (299)
Q Consensus 26 ~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (299)
..+|.+|+|+..| ++|+|||+||++.++.. |.+.+..+..+||+|+++|+||||.|+.+. ..++++++
T Consensus 5 ~~dG~~i~y~~~G--~g~pvvllHG~~~~~~~------~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~----~~~~~~~~ 72 (273)
T d1a8sa_ 5 TRDGTQIYYKDWG--SGQPIVFSHGWPLNADS------WESQMIFLAAQGYRVIAHDRRGHGRSSQPW----SGNDMDTY 72 (273)
T ss_dssp CTTSCEEEEEEES--CSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCCS----SCCSHHHH
T ss_pred eeCCcEEEEEEEC--CCCeEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEEechhcCcccccc----ccccccch
Confidence 3455689999999 57899999999988755 655555555789999999999999996432 35899999
Q ss_pred HHHHHHHHHhcCCCcEEEEeeCccHHHHHHH-HHHccCcccEEEEecCCCCCcchhHHH----HhhhhhhhHHhhc---c
Q 022316 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLF-AMKYRHRVLGLILVSPLCKAPSWTEWL----YNKVMSNLLYYYG---M 177 (299)
Q Consensus 106 ~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~-a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~~~~~---~ 177 (299)
++++.+++++++.++.+++|||+||.++..+ |..+|++|++++++++.+......... ........ .... .
T Consensus 73 ~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 151 (273)
T d1a8sa_ 73 ADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGI-RQASLADR 151 (273)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhH-HHHHHHHH
Confidence 9999999999999999999999988766554 556799999999999765432111000 00000000 0000 0
Q ss_pred hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-
Q 022316 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 256 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~- 256 (299)
...........++...... ........+.+..................+.. .+..+.++++++|+++|+|++|.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvlii~g~~D~~~~ 228 (273)
T d1a8sa_ 152 SQLYKDLASGPFFGFNQPG--AKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSE-TDFTEDLKKIDVPTLVVHGDADQVVP 228 (273)
T ss_dssp HHHHHHHHHTTSSSTTSTT--CCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHTCCSCEEEEEETTCSSSC
T ss_pred HHHHHHHhhhhhhhcccch--hhhhHHHHHHHHHhhcccchhhhhhhHHHhhh-hhhhHHHHhhccceEEEecCCCCCCC
Confidence 0111011111111111100 00122333332222222222222333333322 4667788999999999999999987
Q ss_pred -hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 257 -SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
+....+.+.+. .+++++++|++||.++.|.++.++..+.
T Consensus 229 ~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (273)
T d1a8sa_ 229 IEASGIASAALV-KGSTLKIYSGAPHGLTDTHKDQLNADLL 268 (273)
T ss_dssp STTTHHHHHHHS-TTCEEEEETTCCSCHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 44555554442 2388999999999999887776654443
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2.1e-33 Score=220.39 Aligned_cols=247 Identities=12% Similarity=0.101 Sum_probs=153.7
Q ss_pred ceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHH
Q 022316 30 GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (299)
Q Consensus 30 ~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 109 (299)
.+|+|...| ++|+|||+||++.++.. |.+.+..++.+||+|+++|+||||.|+... ..++++++++|+
T Consensus 13 v~i~y~~~G--~G~~ivllHG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~~~~dl 80 (277)
T d1brta_ 13 IDLYYEDHG--TGQPVVLIHGFPLSGHS------WERQSAALLDAGYRVITYDRRGFGQSSQPT----TGYDYDTFAADL 80 (277)
T ss_dssp EEEEEEEEC--SSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCCS----SCCSHHHHHHHH
T ss_pred EEEEEEEEc--cCCeEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEEeCCCCCcccccc----cccchhhhhhhh
Confidence 378899999 68899999999988755 655555566789999999999999996422 358999999999
Q ss_pred HHHHHhcCCCcEEEEeeCccH-HHHHHHHHHccCcccEEEEecCCCCCcchhH--------HHHhhhhhhhHHhhcchhH
Q 022316 110 AEVLNHFGLGAVMCMGVTAGA-YILTLFAMKYRHRVLGLILVSPLCKAPSWTE--------WLYNKVMSNLLYYYGMCGV 180 (299)
Q Consensus 110 ~~~l~~l~~~~~~lvG~S~Gg-~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 180 (299)
.++++++++++++++|||||| .++..+|.++|++|+++|++++......... ............ ......
T Consensus 81 ~~~l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 159 (277)
T d1brta_ 81 NTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVK-ADRYAF 159 (277)
T ss_dssp HHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHH-HCHHHH
T ss_pred hhhhhccCcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhh-ccchhh
Confidence 999999999999999999996 5566677788999999999997654321110 000000000000 000011
Q ss_pred HHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHH-hhcCCCChhhhhccccccEEEEecCCCcch--h
Q 022316 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLE-AINGRPDISEGLRKLQCRSLIFVGESSPFH--S 257 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~ 257 (299)
. ......++........ ............ ......+..... ......+....++++++|+++|+|++|.++ +
T Consensus 160 ~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~ 234 (277)
T d1brta_ 160 Y-TGFFNDFYNLDENLGT-RISEEAVRNSWN---TAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIE 234 (277)
T ss_dssp H-HHHHHHHTTHHHHBTT-TBCHHHHHHHHH---HHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGG
T ss_pred h-hhccccccccchhhhh-hhhHHHhhhhhc---ccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcCHH
Confidence 1 1111111111110000 001111111111 111111111111 111224566778899999999999999987 3
Q ss_pred hh-HHHhhhccccCceEEEEcCchhhhHhHHHHHH----HHhhh
Q 022316 258 EA-VHMTSKIDRRYSALVEVWTRVYISLLGFLVLL----ASFCE 296 (299)
Q Consensus 258 ~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~----~~~~~ 296 (299)
.. +.+.+.+++ ++++++|++||.++.|-++.+ .+|++
T Consensus 235 ~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~ 276 (277)
T d1brta_ 235 NTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLA 276 (277)
T ss_dssp GTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHC
Confidence 43 345555554 899999999999988765554 45554
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=9.1e-34 Score=226.45 Aligned_cols=263 Identities=11% Similarity=0.036 Sum_probs=162.4
Q ss_pred CCCcceee----cCCceEEEEeccCCC-CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 19 SGKDNLIK----TSHGSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 19 ~~~~~~i~----~~~~~l~~~~~g~~~-~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
+.+.+++. .++.+++|...|+++ .|+|||+||++.++.. |...+..+...||+|+++|+||||.|..+.
T Consensus 19 p~~~~~~~~~~~~~g~~~~y~~~G~~~~~p~llllHG~~~~~~~------~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~ 92 (310)
T d1b6ga_ 19 PFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYL------YRKMIPVFAESGARVIAPDFFGFGKSDKPV 92 (310)
T ss_dssp CCCCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGG------GTTTHHHHHHTTCEEEEECCTTSTTSCEES
T ss_pred CCCCceeccccCCCCEEEEEEEecCCCCCCEEEEECCCCCchHH------HHHHHHHhhccCceEEEeeecCcccccccc
Confidence 44445554 466799999999865 5678899999988755 766666666789999999999999997532
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchh--HHHHh--hhh-
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWLYN--KVM- 168 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~--~~~- 168 (299)
....++++++++++.++++++++++++|+||||||.+++.+|.++|++|+++|++++........ .+... ...
T Consensus 93 --~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 170 (310)
T d1b6ga_ 93 --DEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPAD 170 (310)
T ss_dssp --CGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTT
T ss_pred --ccccccccccccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchh
Confidence 23457999999999999999999999999999999999999999999999999999875432211 11000 000
Q ss_pred ---hhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhccc-ccchHHHHHhhcCC---------CChh
Q 022316 169 ---SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGR---------PDIS 235 (299)
Q Consensus 169 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~ 235 (299)
....................+. ... .+.....+...+.... ......+....... ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T d1b6ga_ 171 GFTAWKYDLVTPSDLRLDQFMKRWA-PTL-------TEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAIS 242 (310)
T ss_dssp THHHHHHHHHSCSSCCHHHHHHHHS-TTC-------CHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhccchhhhhhhhhhccC-ccc-------cHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhH
Confidence 0000000000000000111110 000 1222222222111110 00111111111000 0111
Q ss_pred hhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHH----HHHHhhhhc
Q 022316 236 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLV----LLASFCESE 298 (299)
Q Consensus 236 ~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~----~~~~~~~~~ 298 (299)
....++++|+++++|++|.++ +....+.+.+++. .++++++++||.+..+-.+ .+..|++++
T Consensus 243 ~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~~ 310 (310)
T d1b6ga_ 243 FWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGC-PEPLEIADAGHFVQEFGEQVAREALKHFAETE 310 (310)
T ss_dssp HHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHSTTC-CCCEEETTCCSCGGGGHHHHHHHHHHHHHHTC
T ss_pred HhhcccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCC-ccEEEECCCcCchhhhCHHHHHHHHHHHHhCC
Confidence 224678999999999999987 4556666666542 4688999999988766444 455777764
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=3.2e-33 Score=218.39 Aligned_cols=257 Identities=11% Similarity=0.091 Sum_probs=161.6
Q ss_pred ceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccH
Q 022316 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (299)
++++.+|.+|+|+..| ++|+|||+||++.++.. |...+..+..+||+|+++|+||||.|+.+. ..+++
T Consensus 2 ~f~~~dG~~l~y~~~G--~g~~vv~lHG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~~~ 69 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWG--SGKPVLFSHGWLLDADM------WEYQMEYLSSRGYRTIAFDRRGFGRSDQPW----TGNDY 69 (271)
T ss_dssp EEECTTSCEEEEEEES--SSSEEEEECCTTCCGGG------GHHHHHHHHTTTCEEEEECCTTSTTSCCCS----SCCSH
T ss_pred EEEeECCeEEEEEEEc--CCCeEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEEeccccccccccc----ccccc
Confidence 4677788899999999 57889999999888744 645544444679999999999999996532 34799
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeeCccHHHHH-HHHHHccCcccEEEEecCCCCCcchhHHH----HhhhhhhhHHh-h-
Q 022316 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILT-LFAMKYRHRVLGLILVSPLCKAPSWTEWL----YNKVMSNLLYY-Y- 175 (299)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~-~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~~~-~- 175 (299)
+++++++.++++.++.++++++|||+||.+++ .+|.++|++|++++++++........... ........... .
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T d1va4a_ 70 DTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLK 149 (271)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred ccccccceeeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhh
Confidence 99999999999999999999999999987665 55667899999999999765442111000 00000000000 0
Q ss_pred cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcc
Q 022316 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 255 (299)
...... .......+....... .............................. .+....++++++|+++|+|++|.+
T Consensus 150 ~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvl~i~g~~D~~ 224 (271)
T d1va4a_ 150 DRAQFI-SDFNAPFYGINKGQV---VSQGVQTQTLQIALLASLKATVDCVTAFAE-TDFRPDMAKIDVPTLVIHGDGDQI 224 (271)
T ss_dssp HHHHHH-HHHHHHHHTGGGTCC---CCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHHCCSCEEEEEETTCSS
T ss_pred hhhhhh-hhhcchhhcccchhh---hhhhHHHHHHhhhhhhhhhhhhhcccccch-hhhhhhhhhcccceeecccCCCCC
Confidence 000011 111111111111110 012222222222222222223333333322 456677889999999999999998
Q ss_pred h--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHH----HHhhhh
Q 022316 256 H--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLL----ASFCES 297 (299)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~----~~~~~~ 297 (299)
+ +...++.+... .+++++++|++||.++.|-++.+ ..|+++
T Consensus 225 ~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 225 VPFETTGKVAAELI-KGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp SCGGGTHHHHHHHS-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 7 45555544432 23889999999999988765554 456553
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.3e-33 Score=217.89 Aligned_cols=238 Identities=14% Similarity=0.131 Sum_probs=147.6
Q ss_pred eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH
Q 022316 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (299)
Q Consensus 31 ~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~ 110 (299)
.|+|+..|. ++|+|||+||++.++.. |.+ +.+.|+++|+|+++|+||||.|+.. ...++.+++
T Consensus 1 ~i~y~~~G~-g~~~lvllHG~~~~~~~------~~~-~~~~L~~~~~vi~~D~~G~G~S~~~-----~~~~~~d~~---- 63 (256)
T d1m33a_ 1 NIWWQTKGQ-GNVHLVLLHGWGLNAEV------WRC-IDEELSSHFTLHLVDLPGFGRSRGF-----GALSLADMA---- 63 (256)
T ss_dssp CCCEEEECC-CSSEEEEECCTTCCGGG------GGG-THHHHHTTSEEEEECCTTSTTCCSC-----CCCCHHHHH----
T ss_pred CeEEEEECC-CCCeEEEECCCCCCHHH------HHH-HHHHHhCCCEEEEEeCCCCCCcccc-----ccccccccc----
Confidence 368999994 44789999999888744 644 4567788999999999999999643 235555544
Q ss_pred HHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH--hhhhhhhHHhhcchhHHHHHHHHh
Q 022316 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY--NKVMSNLLYYYGMCGVVKELLLKR 188 (299)
Q Consensus 111 ~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 188 (299)
+.+..+..++++++||||||.+++.+|.++|+++++++++++.+.......+.. ....... . ....... ......
T Consensus 64 ~~~~~~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~ 140 (256)
T d1m33a_ 64 EAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGF-Q-QQLSDDQ-QRTVER 140 (256)
T ss_dssp HHHHTTSCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHH-H-HHHHHHH-HHHHHH
T ss_pred cccccccccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHH-H-hhhhhhh-HHHHHH
Confidence 344455679999999999999999999999999999999987665432111100 0000000 0 0000001 112222
Q ss_pred hhccccccCCCCCchHHHHHHHHhhhccc---ccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHh
Q 022316 189 YFSKEVRGNAQVPESDIVQACRRLLDERQ---SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMT 263 (299)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~ 263 (299)
++........ ........+........ ...+......+.. .+..+.+++|++|+++|+|++|.++ +....+.
T Consensus 141 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~ 217 (256)
T d1m33a_ 141 FLALQTMGTE--TARQDARALKKTVLALPMPEVDVLNGGLEILKT-VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLD 217 (256)
T ss_dssp HHHTTSTTST--THHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHH-CCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CT
T ss_pred Hhhhhhcccc--chhhHHHHHHHhhhhcchhhHHHHHhhhhhhcc-cchHHHHHhccCCccccccccCCCCCHHHHHHHH
Confidence 2222111110 01222222222222221 2223333333322 4666778999999999999999997 5566666
Q ss_pred hhccccCceEEEEcCchhhhHhHHHHHHHH
Q 022316 264 SKIDRRYSALVEVWTRVYISLLGFLVLLAS 293 (299)
Q Consensus 264 ~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~ 293 (299)
+.+++ +++++++++||.++.|-+++++.
T Consensus 218 ~~~~~--~~~~~i~~~gH~~~~e~p~~~~~ 245 (256)
T d1m33a_ 218 KLWPH--SESYIFAKAAHAPFISHPAEFCH 245 (256)
T ss_dssp TTCTT--CEEEEETTCCSCHHHHSHHHHHH
T ss_pred HHCCC--CEEEEECCCCCchHHHCHHHHHH
Confidence 66654 88999999999998876555543
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-34 Score=213.02 Aligned_cols=194 Identities=12% Similarity=0.166 Sum_probs=148.6
Q ss_pred CCCcceeecCCceEEEEeccC---CCCCeEEEecccccchhhhccccccCc--hhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCP--EACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~--~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
+.++.+++.++.+++|+..++ +.+|+|||+||++.+... |.. .+..+...||+|+++|+||||+|....
T Consensus 5 ~~~e~~i~v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~------w~~~~~~~~la~~gy~via~D~~G~G~S~~~~ 78 (208)
T d1imja_ 5 EQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSET------WQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAA 78 (208)
T ss_dssp EECCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHH------HHHHTHHHHHHHTTCEEEEECCTTSGGGTTSC
T ss_pred CceEEEEEECCEEEEEEEecCCCCCCCCeEEEECCCCCChhH------HhhhHHHHHHHHcCCeEEEeecccccCCCCCC
Confidence 346678899999999998765 346789999999988755 532 234455679999999999999996543
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHH
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (299)
. ...++..+.++++.++++.++.++++|+||||||.+++.+|.++|++++++|+++|.....
T Consensus 79 ~--~~~~~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~---------------- 140 (208)
T d1imja_ 79 A--PAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK---------------- 140 (208)
T ss_dssp C--SSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG----------------
T ss_pred c--ccccchhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCcccccc----------------
Confidence 2 2234556667888899999999999999999999999999999999999999998732100
Q ss_pred hhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCC
Q 022316 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (299)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D 253 (299)
...+.+.++++|+|+|+|++|
T Consensus 141 -----------------------------------------------------------~~~~~~~~i~~P~Lii~G~~D 161 (208)
T d1imja_ 141 -----------------------------------------------------------INAANYASVKTPALIVYGDQD 161 (208)
T ss_dssp -----------------------------------------------------------SCHHHHHTCCSCEEEEEETTC
T ss_pred -----------------------------------------------------------cccccccccccccccccCCcC
Confidence 001124568899999999999
Q ss_pred cchhhhHHHhhhccccCceEEEEcCchhhhHhH----HHHHHHHhhhh
Q 022316 254 PFHSEAVHMTSKIDRRYSALVEVWTRVYISLLG----FLVLLASFCES 297 (299)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----f~~~~~~~~~~ 297 (299)
.+++...+..+.+++ .++.+++++||....+ |.+.+.+|+++
T Consensus 162 ~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 162 PMGQTSFEHLKQLPN--HRVLIMKGAGHPCYLDKPEEWHTGLLDFLQG 207 (208)
T ss_dssp HHHHHHHHHHTTSSS--EEEEEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred cCCcHHHHHHHhCCC--CeEEEECCCCCchhhhCHHHHHHHHHHHHhc
Confidence 988544555666654 8899999999988765 55556677664
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=4.3e-32 Score=215.88 Aligned_cols=129 Identities=11% Similarity=0.044 Sum_probs=111.9
Q ss_pred CCCcceeecCC-ceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC
Q 022316 19 SGKDNLIKTSH-GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 19 ~~~~~~i~~~~-~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
+.+++++++.+ .+|+|+..|++++|||||+||++.++.. |.. +...++++|+|+++|+||||.|.... ..
T Consensus 10 p~~~~~v~~~dG~~i~y~~~G~~~g~pvvllHG~~~~~~~------w~~-~~~~l~~~~~vi~~D~rG~G~S~~~~--~~ 80 (313)
T d1wm1a_ 10 AYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGIS------PHH-RQLFDPERYKVLLFDQRGCGRSRPHA--SL 80 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCC------GGG-GGGSCTTTEEEEEECCTTSTTCBSTT--CC
T ss_pred CCcCCEEEeCCCcEEEEEEecCCCCCeEEEECCCCCcccc------hHH-HHHHhhcCCEEEEEeCCCcccccccc--cc
Confidence 44567899865 5999999998889999999999988744 644 46778889999999999999997543 24
Q ss_pred CcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
..++..++++|+..+++.+++++++++|||+||.+++.+|..+|++|++++++++....
T Consensus 81 ~~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~ 139 (313)
T d1wm1a_ 81 DNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLR 139 (313)
T ss_dssp TTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred cccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeeccccccc
Confidence 56889999999999999999999999999999999999999999999999999987654
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=1.4e-31 Score=211.49 Aligned_cols=134 Identities=10% Similarity=-0.018 Sum_probs=106.0
Q ss_pred CCCCCCCCcceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 14 ETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
...++ .+.+++++++.+|+|...| ++|+|||+||++.++.. |.+. .+.|+++|+|+++|+||||.|....
T Consensus 3 ~~~p~-~~~~fi~~~g~~i~y~~~G--~g~~vvllHG~~~~~~~------~~~~-~~~L~~~~~vi~~Dl~G~G~S~~~~ 72 (298)
T d1mj5a_ 3 GAKPF-GEKKFIEIKGRRMAYIDEG--TGDPILFQHGNPTSSYL------WRNI-MPHCAGLGRLIACDLIGMGDSDKLD 72 (298)
T ss_dssp CSSCS-SCCEEEEETTEEEEEEEES--CSSEEEEECCTTCCGGG------GTTT-GGGGTTSSEEEEECCTTSTTSCCCS
T ss_pred CCcCC-CCCEEEEECCEEEEEEEEc--CCCcEEEECCCCCCHHH------HHHH-HHHHhcCCEEEEEeCCCCCCCCCCc
Confidence 33344 3457899999999999999 57899999999988755 7444 5678889999999999999997644
Q ss_pred CCCCCcccHHHHHHHHHHHH-HhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 94 SDDEPVLSVDDLADQIAEVL-NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l-~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
..........+..+++..++ +..+.++++++||||||.+++.+|.++|++|.+++++++.....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~ 137 (298)
T d1mj5a_ 73 PSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPI 137 (298)
T ss_dssp SCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCB
T ss_pred cccccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccc
Confidence 33333455666666665554 55567899999999999999999999999999999999776553
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.97 E-value=3.2e-30 Score=199.22 Aligned_cols=231 Identities=11% Similarity=0.025 Sum_probs=144.2
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC-Cc
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-GA 120 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~~ 120 (299)
+++|||+||++.++.. |.+.+..+..+||+|+++|+||||+|+.+. ...++++++++++..+++.... ++
T Consensus 2 G~~vvllHG~~~~~~~------w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWS------WYKLKPLLEAAGHKVTALDLAASGTDLRKI---EELRTLYDYTLPLMELMESLSADEK 72 (258)
T ss_dssp CCEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEECCCTTSTTCCCCG---GGCCSHHHHHHHHHHHHHTSCSSSC
T ss_pred CCcEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEecCCCCCCCCCCC---CCCcchHHHHHHHhhhhhccccccc
Confidence 6789999999988855 755544444568999999999999996532 2357899999999999988776 58
Q ss_pred EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHh---hcchh-------------HHHHH
Q 022316 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY---YGMCG-------------VVKEL 184 (299)
Q Consensus 121 ~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------~~~~~ 184 (299)
++++||||||.+++.++.++|++++++|++++...................... ..... .....
T Consensus 73 ~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (258)
T d1xkla_ 73 VILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPK 152 (258)
T ss_dssp EEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHH
T ss_pred ccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHH
Confidence 999999999999999999999999999999986554321111100000000000 00000 00000
Q ss_pred HHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHH
Q 022316 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 262 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~ 262 (299)
.....+.... ..+......... ............ .+....+..+++|+++|+|++|.++ +..+.+
T Consensus 153 ~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 219 (258)
T d1xkla_ 153 FLAHKLYQLC-------SPEDLALASSLV--RPSSLFMEDLSK----AKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQ 219 (258)
T ss_dssp HHHHHTSTTS-------CHHHHHHHHHHC--CCBCCCHHHHHH----CCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHH
T ss_pred HHHHHhhhcc-------cHHHHHHhhhhh--hhhhhhhhhhhh----hhhcccccccccceeEeeecCCCCCCHHHHHHH
Confidence 0000000000 011111000000 000111111111 2333446778999999999999998 566777
Q ss_pred hhhccccCceEEEEcCchhhhHhHHHHHHHHhhh
Q 022316 263 TSKIDRRYSALVEVWTRVYISLLGFLVLLASFCE 296 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~ 296 (299)
.+.+++ +++++++++||.++.|-++.++..+.
T Consensus 220 ~~~~~~--~~~~~i~~~gH~~~~e~P~~~~~~l~ 251 (258)
T d1xkla_ 220 IDNIGV--TEAIEIKGADHMAMLCEPQKLCASLL 251 (258)
T ss_dssp HHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred HHHCCC--CEEEEECCCCCchHHhCHHHHHHHHH
Confidence 777765 88999999999999987777665554
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.97 E-value=3.1e-30 Score=199.43 Aligned_cols=229 Identities=9% Similarity=0.027 Sum_probs=141.0
Q ss_pred EEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcC-CCcEEE
Q 022316 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LGAVMC 123 (299)
Q Consensus 45 lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~~l 123 (299)
.||+||++.++.. |.+.+..+..+||+|+++|+||||.|+.+. ...++++++++++.++++.++ .++++|
T Consensus 5 ~vliHG~~~~~~~------w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~l 75 (256)
T d3c70a1 5 FVLIHTICHGAWI------WHKLKPLLEALGHKVTALDLAASGVDPRQI---EEIGSFDEYSEPLLTFLEALPPGEKVIL 75 (256)
T ss_dssp EEEECCTTCCGGG------GTTHHHHHHHTTCEEEEECCTTSTTCSCCG---GGCCSHHHHTHHHHHHHHHSCTTCCEEE
T ss_pred EEEeCCCCCCHHH------HHHHHHHHHhCCCEEEEEcCCCCCCCCCCC---CCCCCHHHHHHHhhhhhhhhccccceee
Confidence 4899999888755 755544443568999999999999996532 235899999999999988865 588999
Q ss_pred EeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcch--------------hHHHHHHHHhh
Q 022316 124 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC--------------GVVKELLLKRY 189 (299)
Q Consensus 124 vG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 189 (299)
+||||||.+++.+|.++|++|+++|++++.......................... ...........
T Consensus 76 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T d3c70a1 76 VGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLREN 155 (256)
T ss_dssp EEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHH
T ss_pred cccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhh
Confidence 9999999999999999999999999999765443211110000000000000000 00000000000
Q ss_pred hccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhcc
Q 022316 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKID 267 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~ 267 (299)
+... ............. ......... . ...........+++|+++|+|++|.++ +..+.+.+.++
T Consensus 156 ~~~~--------~~~~~~~~~~~~~-~~~~~~~~~---~-~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p 222 (256)
T d3c70a1 156 LYTL--------CGPEEYELAKMLT-RKGSLFQNI---L-AKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK 222 (256)
T ss_dssp TSTT--------SCHHHHHHHHHHC-CCBCCCHHH---H-TTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSC
T ss_pred hhhh--------cchhhHHHhhhhh-hhhhHHHhh---h-hhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCC
Confidence 0000 0000000011000 000111111 1 112223345667899999999999998 55667777776
Q ss_pred ccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 268 RRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 268 ~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
+ +++++++++||.+++|-+++++..+.+
T Consensus 223 ~--~~~~~i~~agH~~~~e~P~~~~~~l~~ 250 (256)
T d3c70a1 223 P--DKVYKVEGGDHKLQLTKTKEIAEILQE 250 (256)
T ss_dssp C--SEEEECCSCCSCHHHHSHHHHHHHHHH
T ss_pred C--CEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 5 889999999999999877777765554
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.97 E-value=1.1e-29 Score=196.77 Aligned_cols=247 Identities=13% Similarity=-0.008 Sum_probs=140.1
Q ss_pred CCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHH
Q 022316 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (299)
Q Consensus 28 ~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (299)
..++|+|...+ +++|+|||+||++.++.. |.+. .+.| ..||+|+++|+||||.|..... ........+
T Consensus 3 ~~~~lh~~~~~-~~~P~ivllHG~~~~~~~------~~~~-~~~L~~~g~~vi~~Dl~G~G~s~~~~~---~~~~~~~~~ 71 (264)
T d1r3da_ 3 LSNQLHFAKPT-ARTPLVVLVHGLLGSGAD------WQPV-LSHLARTQCAALTLDLPGHGTNPERHC---DNFAEAVEM 71 (264)
T ss_dssp CCEEEESSCCB-TTBCEEEEECCTTCCGGG------GHHH-HHHHTTSSCEEEEECCTTCSSCC----------CHHHHH
T ss_pred cCCeEEEcCCC-CCCCeEEEeCCCCCCHHH------HHHH-HHHHHhCCCEEEEEecccccccccccc---cccchhhhh
Confidence 45678886665 467899999999988755 7444 4555 4699999999999999864322 223333444
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcc---hhHHHHhhhhhhhHHhhcchhHHHH
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWLYNKVMSNLLYYYGMCGVVKE 183 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (299)
.+........+.++++++||||||.+++.+|.++|+++.+++++.+...... .............+......... .
T Consensus 72 ~~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 150 (264)
T d1r3da_ 72 IEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPI-E 150 (264)
T ss_dssp HHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCH-H
T ss_pred hhhcccccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhh-h
Confidence 4444445556668999999999999999999999999999888765443321 11111000000000000000000 1
Q ss_pred HHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhh--cCCCChhhhhccccccEEEEecCCCcchhhhHH
Q 022316 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSEAVH 261 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~ 261 (299)
.....++........ ........................... .......+.+..+++|+++|+|++|..+..
T Consensus 151 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~~~--- 224 (264)
T d1r3da_ 151 HVLSDWYQQAVFSSL---NHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQQ--- 224 (264)
T ss_dssp HHHHHHTTSGGGTTC---CHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHHH---
T ss_pred hhhhhhhhhhhhccc---chHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHHHH---
Confidence 111222222211110 223333333322222111122111111 112344566889999999999999977632
Q ss_pred HhhhccccCceEEEEcCchhhhHhHHHHHHHHhh
Q 022316 262 MTSKIDRRYSALVEVWTRVYISLLGFLVLLASFC 295 (299)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~ 295 (299)
+.+ .+ ++++++++++||.++.|.++.++..+
T Consensus 225 ~~~-~~--~~~~~~i~~~gH~~~~e~P~~~~~~i 255 (264)
T d1r3da_ 225 LAE-SS--GLSYSQVAQAGHNVHHEQPQAFAKIV 255 (264)
T ss_dssp HHH-HH--CSEEEEETTCCSCHHHHCHHHHHHHH
T ss_pred HHh-cC--CCeEEEECCCCCchHHHCHHHHHHHH
Confidence 222 22 37899999999999988655554333
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.96 E-value=2.8e-28 Score=199.32 Aligned_cols=138 Identities=16% Similarity=0.103 Sum_probs=97.4
Q ss_pred CCCCCCcceeecCCc-eEEEE--ecc------CCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCC
Q 022316 16 PPPSGKDNLIKTSHG-SLSVT--IYG------DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH 86 (299)
Q Consensus 16 ~~~~~~~~~i~~~~~-~l~~~--~~g------~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~ 86 (299)
...+.+++.++|++| .|... .++ .+.+|+|||+||++.++........-...+..+..+||+|+++|+|||
T Consensus 23 ~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~ 102 (377)
T d1k8qa_ 23 WGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp TTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred cCCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCC
Confidence 456778899999777 44332 222 235789999999998876521111001122344567999999999999
Q ss_pred CCCCCCCCC-----CCCccc-----HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCC
Q 022316 87 EFGAAAISD-----DEPVLS-----VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (299)
Q Consensus 87 G~S~~~~~~-----~~~~~~-----~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 153 (299)
|.|..+... .....+ ..|+++++..+++.++.++++|+||||||++++.+|.++|+.+++++++...
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~ 179 (377)
T d1k8qa_ 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYAL 179 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEE
T ss_pred CCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeec
Confidence 999653211 112233 3456677888888899999999999999999999999999999888876643
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.95 E-value=4.6e-27 Score=179.52 Aligned_cols=218 Identities=11% Similarity=0.055 Sum_probs=134.9
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHH---HHHHHHHhcC
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD---QIAEVLNHFG 117 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~---~l~~~l~~l~ 117 (299)
++++|||+||++.+... |...+..+..+||+|+++|+||||.|..+.. ..+..+..+ ++...++..+
T Consensus 10 ~~~~vvliHG~~~~~~~------~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 79 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSAD------VRMLGRFLESKGYTCHAPIYKGHGVPPEELV----HTGPDDWWQDVMNGYEFLKNKG 79 (242)
T ss_dssp SSCEEEEECCTTCCTHH------HHHHHHHHHHTTCEEEECCCTTSSSCHHHHT----TCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEEeCCCCcccccccc----ccchhHHHHHHHHHHhhhhhcc
Confidence 56789999999988755 5444344445699999999999998864322 233444443 3444456678
Q ss_pred CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhh--hhhhhHHhhcchhHHHHHHHHhhhccccc
Q 022316 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK--VMSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (299)
Q Consensus 118 ~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (299)
.++++++||||||.+++.++.++|.. .+++++++............. ...........
T Consensus 80 ~~~~~l~G~S~Gg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 139 (242)
T d1tqha_ 80 YEKIAVAGLSLGGVFSLKLGYTVPIE--GIVTMCAPMYIKSEETMYEGVLEYAREYKKREGK------------------ 139 (242)
T ss_dssp CCCEEEEEETHHHHHHHHHHTTSCCS--CEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTC------------------
T ss_pred cCceEEEEcchHHHHhhhhcccCccc--ccccccccccccchhHHHHHHHHHHHHHhhhccc------------------
Confidence 89999999999999999999998854 566677666554333221100 00000000000
Q ss_pred cCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceE
Q 022316 196 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSAL 273 (299)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~ 273 (299)
........................... ......+..+++|+|+++|++|..+ +.++.+.+.+.+.++++
T Consensus 140 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (242)
T d1tqha_ 140 ------SEEQIEQEMEKFKQTPMKTLKALQELI---ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQI 210 (242)
T ss_dssp ------CHHHHHHHHHHHTTSCCTTHHHHHHHH---HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEE
T ss_pred ------hhhhHHHHHhhhhhhccchhhcccccc---cccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEE
Confidence 011111111111111111111111110 1233456789999999999999997 67788888887667899
Q ss_pred EEEcCchhhhHhH-----HHHHHHHhhhh
Q 022316 274 VEVWTRVYISLLG-----FLVLLASFCES 297 (299)
Q Consensus 274 ~~~~~~~H~~~~~-----f~~~~~~~~~~ 297 (299)
++++++||.++.+ +.+.+.+|+++
T Consensus 211 ~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~ 239 (242)
T d1tqha_ 211 KWYEQSGHVITLDQEKDQLHEDIYAFLES 239 (242)
T ss_dssp EEETTCCSSGGGSTTHHHHHHHHHHHHHH
T ss_pred EEECCCCCcCccccCHHHHHHHHHHHHHh
Confidence 9999999988764 55667788875
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.95 E-value=3.1e-27 Score=186.92 Aligned_cols=225 Identities=10% Similarity=0.044 Sum_probs=138.0
Q ss_pred CcceeecCCc-eEEEEeccC-----CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCC-CCCCCCC
Q 022316 21 KDNLIKTSHG-SLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAI 93 (299)
Q Consensus 21 ~~~~i~~~~~-~l~~~~~g~-----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~-G~S~~~~ 93 (299)
..|.+++++| .|++..+-+ ..+++||++||++.+... |...+..+..+||+|+++|+||| |.|...
T Consensus 5 ~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~------~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~- 77 (302)
T d1thta_ 5 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDH------FAGLAEYLSTNGFHVFRYDSLHHVGLSSGS- 77 (302)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGG------GHHHHHHHHTTTCCEEEECCCBCC-------
T ss_pred eeeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHH------HHHHHHHHHHCCCEEEEecCCCCCCCCCCc-
Confidence 4578888776 687776543 235689999999887633 43444455566999999999998 788643
Q ss_pred CCCCCcccHHHHHHHHHHHHHhc---CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhh
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (299)
...+++.+..+|+.++++.+ +.++++|+||||||.+++.+|.. .+++++|+.+|........... +..
T Consensus 78 ---~~~~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~~~~~----~~~ 148 (302)
T d1thta_ 78 ---IDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDTLEKA----LGF 148 (302)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHHHHHH----HSS
T ss_pred ---ccCCCHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHHHHHHH----Hhh
Confidence 23477888888887776655 57899999999999999998864 4589999998766533221100 000
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEec
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 250 (299)
. ...... . ......... ........+............ ......+.++++|+|+++|
T Consensus 149 ~-~~~~~~--------~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~PvLii~G 205 (302)
T d1thta_ 149 D-YLSLPI--------D-ELPNDLDFE---GHKLGSEVFVRDCFEHHWDTL----------DSTLDKVANTSVPLIAFTA 205 (302)
T ss_dssp C-GGGSCG--------G-GCCSEEEET---TEEEEHHHHHHHHHHTTCSSH----------HHHHHHHTTCCSCEEEEEE
T ss_pred c-cchhhh--------h-hcccccccc---ccchhhHHHHHHHHHhHHHHH----------HHHHHHHhhcCCCEEEEEe
Confidence 0 000000 0 000000000 000001111111100000000 1123457789999999999
Q ss_pred CCCcch--hhhHHHhhhccccCceEEEEcCchhhhH
Q 022316 251 ESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISL 284 (299)
Q Consensus 251 ~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 284 (299)
++|.++ +.+.++.+.+++++++++.+++++|.+.
T Consensus 206 ~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~ 241 (302)
T d1thta_ 206 NNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG 241 (302)
T ss_dssp TTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT
T ss_pred CCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc
Confidence 999998 7789999999888899999999999754
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.95 E-value=2e-26 Score=189.29 Aligned_cols=124 Identities=10% Similarity=0.084 Sum_probs=104.1
Q ss_pred ceeecCCceEEEEec--cCCCCCeEEEecccccchhhhccccccCchhhhcccC-c------eEEEEECCCCCCCCCCCC
Q 022316 23 NLIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-N------FCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~--g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~------~~vi~~D~~G~G~S~~~~ 93 (299)
+.++++|.+|||... +.++++||||+||++.+... |... .+.|++ | |+||++|+||||.|+.+.
T Consensus 85 f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~------w~~v-i~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~ 157 (394)
T d1qo7a_ 85 FTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVE------FYPI-LQLFREEYTPETLPFHLVVPSLPGYTFSSGPP 157 (394)
T ss_dssp EEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGG------GHHH-HHHHHHHCCTTTCCEEEEEECCTTSTTSCCCC
T ss_pred eEEEECCEEEEEEEEeccCCCCCEEEEeccccccHHH------HHHH-HHhhccccCCcccceeeecccccccCCCCCCC
Confidence 456678889999754 34577899999999999966 7555 455544 5 999999999999997542
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
....+++.++++++..+++.++.++++++|||+||.++..++..+|+++.++++++....
T Consensus 158 --~~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~ 217 (394)
T d1qo7a_ 158 --LDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMR 217 (394)
T ss_dssp --SSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCC
T ss_pred --CCCccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeeccc
Confidence 234689999999999999999999999999999999999999999999999998876554
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.4e-27 Score=184.23 Aligned_cols=102 Identities=9% Similarity=0.009 Sum_probs=86.6
Q ss_pred CCeEEEecccccchhhhccccccCchhhhccc---CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLL---HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~---~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (299)
.|||||+||++.++.. |... .+.+. .+|+|+++|+||||.|..+ ..++++++++++.++++.++
T Consensus 2 ~~PvvllHG~~~~~~~------~~~~-~~~l~~~~~~~~v~~~d~~G~g~S~~~-----~~~~~~~~~~~l~~~l~~l~- 68 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYS------FRHL-LEYINETHPGTVVTVLDLFDGRESLRP-----LWEQVQGFREAVVPIMAKAP- 68 (268)
T ss_dssp CCCEEEECCTTCCGGG------GHHH-HHHHHHHSTTCCEEECCSSCSGGGGSC-----HHHHHHHHHHHHHHHHHHCT-
T ss_pred CCCEEEECCCCCCHHH------HHHH-HHHHHhhCCCeEEEEeCCCCCCCCCCc-----cccCHHHHHHHHHHHHhccC-
Confidence 4679999999988755 6444 44443 3799999999999999643 35899999999999999999
Q ss_pred CcEEEEeeCccHHHHHHHHHHccC-cccEEEEecCCCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKA 156 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~ 156 (299)
++++|+||||||.+|+.+|.++|+ +|+++|+++++...
T Consensus 69 ~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~~~ 107 (268)
T d1pjaa_ 69 QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMG 107 (268)
T ss_dssp TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTC
T ss_pred CeEEEEccccHHHHHHHHHHHCCccccceEEEECCCCcc
Confidence 999999999999999999999998 69999999986543
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.93 E-value=5.8e-25 Score=177.85 Aligned_cols=229 Identities=11% Similarity=0.044 Sum_probs=146.3
Q ss_pred CCCCCcceeecCCceEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC
Q 022316 17 PPSGKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (299)
Q Consensus 17 ~~~~~~~~i~~~~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 93 (299)
..+.+...|+.++.+|....+-+ ++.|+||++||+.++... |......+...||.|+++|+||||.|....
T Consensus 103 ~~~~e~v~ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~------~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~ 176 (360)
T d2jbwa1 103 SPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEE------SFQMENLVLDRGMATATFDGPGQGEMFEYK 176 (360)
T ss_dssp SSCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTT------THHHHHHHHHTTCEEEEECCTTSGGGTTTC
T ss_pred CCCeEEeecCcCCcccceEEEecCCCCCceEEEEeCCCCccHHH------HHHHHHHHHhcCCEEEEEccccccccCccc
Confidence 34556677888988987766543 345789999998765422 223334556679999999999999885432
Q ss_pred CCCCCcccHHHHHHHHHHHHHhcC---CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhh
Q 022316 94 SDDEPVLSVDDLADQIAEVLNHFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (299)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~---~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (299)
. .....+.....+.+++.... .+++.|+||||||.+++.+|...| +|+++|.+++..........
T Consensus 177 ~---~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~~-------- 244 (360)
T d2jbwa1 177 R---IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDLE-------- 244 (360)
T ss_dssp C---SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGGS--------
T ss_pred c---ccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhhh--------
Confidence 2 22456666666666665543 368999999999999999999887 69999999886654321110
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEec
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 250 (299)
.... ............ ..+....... . .+....+.+|+||+|+++|
T Consensus 245 -------~~~~-~~~~~~~~~~~~-------~~~~~~~~~~---------------~----~~~~~~~~~i~~P~Lii~G 290 (360)
T d2jbwa1 245 -------TPLT-KESWKYVSKVDT-------LEEARLHVHA---------------A----LETRDVLSQIACPTYILHG 290 (360)
T ss_dssp -------CHHH-HHHHHHHTTCSS-------HHHHHHHHHH---------------H----TCCTTTGGGCCSCEEEEEE
T ss_pred -------hhhh-hHHHHHhccCCc-------hHHHHHHHHh---------------h----cchhhhHhhCCCCEEEEEe
Confidence 0000 000011111000 0111111000 0 1233457789999999999
Q ss_pred CCCcch-hhhHHHhhhccccCceEEEEcCchhhhH---hHHHHHHHHhhhh
Q 022316 251 ESSPFH-SEAVHMTSKIDRRYSALVEVWTRVYISL---LGFLVLLASFCES 297 (299)
Q Consensus 251 ~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~---~~f~~~~~~~~~~ 297 (299)
++|.+. +.+..+.+.++..+.+++.+++++|... .++...+..|+++
T Consensus 291 ~~D~vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~~~~~~~~~~~i~dWl~~ 341 (360)
T d2jbwa1 291 VHDEVPLSFVDTVLELVPAEHLNLVVEKDGDHCCHNLGIRPRLEMADWLYD 341 (360)
T ss_dssp TTSSSCTHHHHHHHHHSCGGGEEEEEETTCCGGGGGGTTHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHhcCCCCeEEEEECCCCcCCCcChHHHHHHHHHHHHH
Confidence 999864 7788888888777788899999999543 2344444455543
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.92 E-value=6.3e-25 Score=146.84 Aligned_cols=100 Identities=15% Similarity=0.153 Sum_probs=86.9
Q ss_pred cceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
..+++.++.+|+|.+.| ++|||||+||.+.+ | .+.++++|+|+++|+||||.|+. + .++
T Consensus 3 ~~~~~~~G~~l~y~~~G--~G~pvlllHG~~~~---------w----~~~L~~~yrvi~~DlpG~G~S~~--p----~~s 61 (122)
T d2dsta1 3 AGYLHLYGLNLVFDRVG--KGPPVLLVAEEASR---------W----PEALPEGYAFYLLDLPGYGRTEG--P----RMA 61 (122)
T ss_dssp EEEEEETTEEEEEEEEC--CSSEEEEESSSGGG---------C----CSCCCTTSEEEEECCTTSTTCCC--C----CCC
T ss_pred ceEEEECCEEEEEEEEc--CCCcEEEEeccccc---------c----cccccCCeEEEEEeccccCCCCC--c----ccc
Confidence 45789999999999999 78999999983211 5 35678899999999999999963 2 478
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccC
Q 022316 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~ 142 (299)
.+++++++.++++.+++++++++||||||.+++++++..+.
T Consensus 62 ~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 62 PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred cchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999987554
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.91 E-value=3.5e-22 Score=158.56 Aligned_cols=270 Identities=14% Similarity=0.184 Sum_probs=167.3
Q ss_pred cCCceEEEEeccCC---CCCeEEEecccccchhhhc---cccccCchhhh--cc-cCceEEEEECCCCCCCCCC-CC---
Q 022316 27 TSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCF---QGLFFCPEACS--LL-LHNFCIYHINPPGHEFGAA-AI--- 93 (299)
Q Consensus 27 ~~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~---~~~~w~~~~~~--~l-~~~~~vi~~D~~G~G~S~~-~~--- 93 (299)
+++.+|.|+.+|.. +.++||++|++.+++.... ...||...+-+ .+ .+.|.||++|..|.|.+.. +.
T Consensus 21 l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~ 100 (357)
T d2b61a1 21 LSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSIN 100 (357)
T ss_dssp ECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBC
T ss_pred cCCceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCC
Confidence 34568999999963 3579999999988765421 12346433321 23 3579999999999875322 11
Q ss_pred C-------CCCCcccHHHHHHHHHHHHHhcCCCcE-EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHh
Q 022316 94 S-------DDEPVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN 165 (299)
Q Consensus 94 ~-------~~~~~~~~~~~~~~l~~~l~~l~~~~~-~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 165 (299)
| ..++..++.|+++....+++++|++++ .|+|.||||++|+++|.++|+.|+++|.+++......+.....
T Consensus 101 p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~- 179 (357)
T d2b61a1 101 PQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFN- 179 (357)
T ss_dssp TTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHH-
T ss_pred CCCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHH-
Confidence 1 124568999999999999999999999 5789999999999999999999999999999877654433221
Q ss_pred hhhhhhHHh----------------hcch--------hHHHHHHHHhhhccccccCCCC-CchHHHHHHHH-----hhhc
Q 022316 166 KVMSNLLYY----------------YGMC--------GVVKELLLKRYFSKEVRGNAQV-PESDIVQACRR-----LLDE 215 (299)
Q Consensus 166 ~~~~~~~~~----------------~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~ 215 (299)
......+.. .|+. .+.....+...|.......... ......+.|.. ....
T Consensus 180 ~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~r 259 (357)
T d2b61a1 180 HVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLER 259 (357)
T ss_dssp HHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhh
Confidence 111111100 0000 0000111112222211111000 00111122222 2333
Q ss_pred ccccchHHHHHhhc------CCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccc--cCceEEEEcCc-hhhhH
Q 022316 216 RQSSNVWHFLEAIN------GRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR--RYSALVEVWTR-VYISL 284 (299)
Q Consensus 216 ~~~~~~~~~~~~~~------~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~--~~~~~~~~~~~-~H~~~ 284 (299)
.++..+....+.+. .+.++.+.+++|++|+|+|..+.|.+. +..++..+.++. ..+++++++.. ||..+
T Consensus 260 fDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdaf 339 (357)
T d2b61a1 260 FDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAF 339 (357)
T ss_dssp CCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHH
T ss_pred CCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCcccc
Confidence 45666666555542 234667779999999999999999986 566777776643 23688888875 99875
Q ss_pred h----HHHHHHHHhhhh
Q 022316 285 L----GFLVLLASFCES 297 (299)
Q Consensus 285 ~----~f~~~~~~~~~~ 297 (299)
+ .+-+.+..||++
T Consensus 340 L~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 340 LVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HHCHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHcc
Confidence 4 244456677764
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.91 E-value=1e-22 Score=162.74 Aligned_cols=262 Identities=14% Similarity=0.170 Sum_probs=163.5
Q ss_pred CceEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhh--cc-cCceEEEEECCCCCCCCC-CC---CC----
Q 022316 29 HGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACS--LL-LHNFCIYHINPPGHEFGA-AA---IS---- 94 (299)
Q Consensus 29 ~~~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~--~l-~~~~~vi~~D~~G~G~S~-~~---~~---- 94 (299)
+.+|.|+.+|. .+.++||++|++.+++... .||...+-+ .+ .+.|.||++|..|.|.+. .+ .|
T Consensus 28 ~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~---~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~ 104 (376)
T d2vata1 28 DVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVT---SWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEG 104 (376)
T ss_dssp EEEEEEEEESCCCTTSCCEEEEECCTTCCSCGG---GTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC-
T ss_pred CceEEEEeecccCCCCCCEEEEcCCCcCCcccc---ccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCccccc
Confidence 34789999996 3467899999998777543 346433322 22 357999999999987432 11 11
Q ss_pred -----CCCCcccHHHHHHHHHHHHHhcCCCcE-EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhh
Q 022316 95 -----DDEPVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (299)
Q Consensus 95 -----~~~~~~~~~~~~~~l~~~l~~l~~~~~-~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (299)
.+++..++.|+++....+++++|++++ .|+|.||||+.|+++|..+|++|+++|.+++......+..... ...
T Consensus 105 ~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~-~~~ 183 (376)
T d2vata1 105 QRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWF-ETQ 183 (376)
T ss_dssp -CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHH-HHH
T ss_pred CCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHH-HHH
Confidence 124567999999999999999999998 5899999999999999999999999999999887765433211 000
Q ss_pred hhhHHh----------------hcchhHH--------HHHHHHhhhccccccCCC-----------------------CC
Q 022316 169 SNLLYY----------------YGMCGVV--------KELLLKRYFSKEVRGNAQ-----------------------VP 201 (299)
Q Consensus 169 ~~~~~~----------------~~~~~~~--------~~~~~~~~~~~~~~~~~~-----------------------~~ 201 (299)
...+.. .|+.... ....+...|......... ..
T Consensus 184 ~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
T d2vata1 184 RQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQ 263 (376)
T ss_dssp HHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------
T ss_pred HHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhccccccccccccccc
Confidence 011000 0010000 000111111110000000 00
Q ss_pred chHHHHHHH-----HhhhcccccchHHHHHhhcCC-------CChhhhhccccccEEEEecCCCcch--hhhHHHhhhcc
Q 022316 202 ESDIVQACR-----RLLDERQSSNVWHFLEAINGR-------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKID 267 (299)
Q Consensus 202 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~ 267 (299)
....++.|. ......+...+....+.+... .++.+.+++|++|+|+|.++.|.+. +..+++.+.++
T Consensus 264 ~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l~ 343 (376)
T d2vata1 264 PIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIP 343 (376)
T ss_dssp CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHST
T ss_pred chhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhcC
Confidence 001111221 122334555666655554431 2456679999999999999999987 77888888886
Q ss_pred ccCceEEEEc-CchhhhHh----HHHHHHHHhhh
Q 022316 268 RRYSALVEVW-TRVYISLL----GFLVLLASFCE 296 (299)
Q Consensus 268 ~~~~~~~~~~-~~~H~~~~----~f~~~~~~~~~ 296 (299)
+ +++.+++ ..||..++ .+-+.+..|++
T Consensus 344 ~--a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~ 375 (376)
T d2vata1 344 N--SRLCVVDTNEGHDFFVMEADKVNDAVRGFLD 375 (376)
T ss_dssp T--EEEEECCCSCGGGHHHHTHHHHHHHHHHHHT
T ss_pred C--CeEEEECCCCCccccccCHHHHHHHHHHHHc
Confidence 5 8888888 68997654 24445556665
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.90 E-value=3.7e-22 Score=148.48 Aligned_cols=193 Identities=13% Similarity=0.049 Sum_probs=124.6
Q ss_pred ceeecCCceEEEEeccC----C-CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC
Q 022316 23 NLIKTSHGSLSVTIYGD----Q-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~----~-~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
-.|..+.|+|.....-+ + ..+++|++|+.+..+.+..+.. .......+.+.||.|+++|+||+|+|..... .
T Consensus 11 l~i~gp~G~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~-~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~--~ 87 (218)
T d2fuka1 11 LTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKV-VTMAARALRELGITVVRFNFRSVGTSAGSFD--H 87 (218)
T ss_dssp EEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHH-HHHHHHHHHTTTCEEEEECCTTSTTCCSCCC--T
T ss_pred EEEeCCCccEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChH-HHHHHHHHHHcCCeEEEeecCCCccCCCccC--c
Confidence 35566778886665432 1 2235688897655543322222 1122233445699999999999999976432 1
Q ss_pred CcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcc
Q 022316 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
.....+|+...+..+.+....++++++||||||.+++.+|.+. .++++|+++|+....
T Consensus 88 ~~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~-------------------- 145 (218)
T d2fuka1 88 GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW-------------------- 145 (218)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB--------------------
T ss_pred CcchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccch--------------------
Confidence 2223344444444445556678999999999999999998875 478999998753100
Q ss_pred hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-
Q 022316 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 256 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~- 256 (299)
.+ ...++.+|+|+|+|++|.++
T Consensus 146 ---------------~~------------------------------------------~~~~~~~P~Lvi~G~~D~~vp 168 (218)
T d2fuka1 146 ---------------DF------------------------------------------SDVQPPAQWLVIQGDADEIVD 168 (218)
T ss_dssp ---------------CC------------------------------------------TTCCCCSSEEEEEETTCSSSC
T ss_pred ---------------hh------------------------------------------hccccccceeeEecCCCcCcC
Confidence 00 00134679999999999998
Q ss_pred -hhhHHHhhhccccCceEEEEcCchhhhH---hHHHHHHHHhhhhc
Q 022316 257 -SEAVHMTSKIDRRYSALVEVWTRVYISL---LGFLVLLASFCESE 298 (299)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~H~~~---~~f~~~~~~~~~~~ 298 (299)
+.+.++.+.+... .+++++|+++|.-- .+..+.+..|+++.
T Consensus 169 ~~~~~~l~~~~~~~-~~l~~i~ga~H~f~~~~~~l~~~~~~~v~~~ 213 (218)
T d2fuka1 169 PQAVYDWLETLEQQ-PTLVRMPDTSHFFHRKLIDLRGALQHGVRRW 213 (218)
T ss_dssp HHHHHHHHTTCSSC-CEEEEETTCCTTCTTCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHccCC-ceEEEeCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 6777777777643 78999999999532 12334445666553
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.89 E-value=5.3e-22 Score=157.84 Aligned_cols=269 Identities=13% Similarity=0.152 Sum_probs=161.0
Q ss_pred CCceEEEEeccCC---CCCeEEEecccccchhhhc-------cccccCchhhh---cccCceEEEEECCCCCCCCCCCC-
Q 022316 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCF-------QGLFFCPEACS---LLLHNFCIYHINPPGHEFGAAAI- 93 (299)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~lvl~HG~~~~~~~~~-------~~~~w~~~~~~---~l~~~~~vi~~D~~G~G~S~~~~- 93 (299)
++.+|.|+.+|.. +.++||++|++.+++.... ...||...+-+ +-.+.|.||++|..|.|.|..+.
T Consensus 25 ~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~ 104 (362)
T d2pl5a1 25 SPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPL 104 (362)
T ss_dssp SSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTT
T ss_pred CCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCcc
Confidence 4568899999963 4578999999987753321 23446433322 22357999999999988654321
Q ss_pred ---C-------CCCCcccHHHHHHHHHHHHHhcCCCcEE-EEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHH
Q 022316 94 ---S-------DDEPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW 162 (299)
Q Consensus 94 ---~-------~~~~~~~~~~~~~~l~~~l~~l~~~~~~-lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 162 (299)
| ...+..++.|+++....+++++|++++. |+|.||||+.|+++|.+||+.|+++|.+++......+...
T Consensus 105 s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~~~ 184 (362)
T d2pl5a1 105 SIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIA 184 (362)
T ss_dssp SBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHH
T ss_pred ccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHHHH
Confidence 1 1234568999999999999999999987 8899999999999999999999999999998877543332
Q ss_pred HHhhhhhhhHHhh-----c-----c-hhHH---HH---------HHHHhhhccccccCCCCCchHHHHHHHH-----hhh
Q 022316 163 LYNKVMSNLLYYY-----G-----M-CGVV---KE---------LLLKRYFSKEVRGNAQVPESDIVQACRR-----LLD 214 (299)
Q Consensus 163 ~~~~~~~~~~~~~-----~-----~-~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 214 (299)
.. ......+... | . ..-+ +. ......|................+.+.. ...
T Consensus 185 ~~-~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~~ 263 (362)
T d2pl5a1 185 FN-EVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVD 263 (362)
T ss_dssp HH-HHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSS
T ss_pred HH-HHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHHh
Confidence 11 1111111100 0 0 0000 00 0111111111000000000000000000 011
Q ss_pred cccccchHHHHHhhcC-----CCChhhhhccccccEEEEecCCCcch--hhhHHHhhhcccc--CceEEEEc-CchhhhH
Q 022316 215 ERQSSNVWHFLEAING-----RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVW-TRVYISL 284 (299)
Q Consensus 215 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~--~~~~~~~~-~~~H~~~ 284 (299)
..+...+....+.+.. ..++.+.+++|++|+|+|..+.|.+. +..+++.+.++.. .+++++++ ..||..+
T Consensus 264 rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHdaF 343 (362)
T d2pl5a1 264 RFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSF 343 (362)
T ss_dssp CCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGGG
T ss_pred cCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchh
Confidence 1233334443333322 12344568999999999999999997 6777788877542 35677776 4799875
Q ss_pred h----HHHHHHHHhhhh
Q 022316 285 L----GFLVLLASFCES 297 (299)
Q Consensus 285 ~----~f~~~~~~~~~~ 297 (299)
+ ++-+.++.|+++
T Consensus 344 L~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 344 LLKNPKQIEILKGFLEN 360 (362)
T ss_dssp GSCCHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHcC
Confidence 3 466777788875
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.88 E-value=1.8e-21 Score=148.63 Aligned_cols=214 Identities=10% Similarity=-0.019 Sum_probs=127.3
Q ss_pred cceeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
...+++.+..+.+...+ +.+|+||++||++.+... |...+..+...||.|+++|+||||.|............
T Consensus 5 ~~~~~l~g~~~~~~~p~-~~~~~vl~lHG~~~~~~~------~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~ 77 (238)
T d1ufoa_ 5 TERLTLAGLSVLARIPE-APKALLLALHGLQGSKEH------ILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRY 77 (238)
T ss_dssp EEEEEETTEEEEEEEES-SCCEEEEEECCTTCCHHH------HHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTH
T ss_pred EEEEEECCEEEEecCCC-CCCeEEEEeCCCCCCHHH------HHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchh
Confidence 34566777666665554 356899999999988754 32333445556999999999999988654433222222
Q ss_pred HHHHHHHH-------HHHHH---hcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhh
Q 022316 102 VDDLADQI-------AEVLN---HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (299)
Q Consensus 102 ~~~~~~~l-------~~~l~---~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (299)
..+..+++ ..++. .....++.++|+|+||.+++.++.++|+. ++++.+.+...........
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~-------- 148 (238)
T d1ufoa_ 78 VEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRP-RGVLAFIGSGFPMKLPQGQ-------- 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCC-SCEEEESCCSSCCCCCTTC--------
T ss_pred hhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcch-hheeeeeeecccccccccc--------
Confidence 23222222 22221 22347899999999999999999999864 4444443322221110000
Q ss_pred HHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecC
Q 022316 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 251 (299)
. .. .+...... . . ..........++|+|+++|+
T Consensus 149 ----~-~~----------------------~~~~~~~~-~---~----------------~~~~~~~~~~~~P~li~~G~ 181 (238)
T d1ufoa_ 149 ----V-VE----------------------DPGVLALY-Q---A----------------PPATRGEAYGGVPLLHLHGS 181 (238)
T ss_dssp ----C-CC----------------------CHHHHHHH-H---S----------------CGGGCGGGGTTCCEEEEEET
T ss_pred ----c-cc----------------------cccccchh-h---h----------------hhhhhhhhhcCCCeEEEEcC
Confidence 0 00 01100000 0 0 01111123346799999999
Q ss_pred CCcch--hhhHHHhhhcc----ccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 252 SSPFH--SEAVHMTSKID----RRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 252 ~D~~~--~~~~~~~~~~~----~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+|.++ +.+.++.+.+. ..+.+++.++++||....+.++...+|++++
T Consensus 182 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~ 234 (238)
T d1ufoa_ 182 RDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHW 234 (238)
T ss_dssp TCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHH
Confidence 99998 55666666552 2346788999999988777676666666654
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=3.2e-22 Score=156.29 Aligned_cols=109 Identities=12% Similarity=0.014 Sum_probs=81.1
Q ss_pred eecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHH
Q 022316 25 IKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD 104 (299)
Q Consensus 25 i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 104 (299)
+..++.+|.+...++++++||||+||++++... | ..+.+.| +++|+++|+||+|.| .++++
T Consensus 8 ~~~~~~~l~~l~~~~~~~~Pl~l~Hg~~gs~~~------~-~~l~~~L--~~~v~~~d~~g~~~~----------~~~~~ 68 (286)
T d1xkta_ 8 VNPEGPTLMRLNSVQSSERPLFLVHPIEGSTTV------F-HSLASRL--SIPTYGLQCTRAAPL----------DSIHS 68 (286)
T ss_dssp CCTTSCSEEECCCCCCCSCCEEEECCTTCCCGG------G-HHHHHTC--SSCEEEECCCTTSCC----------SCHHH
T ss_pred cCCCCCEEEEecCCCCCCCeEEEECCCCccHHH------H-HHHHHHc--CCeEEEEeCCCCCCC----------CCHHH
Confidence 344555676666676777789999999999855 6 3445555 589999999999877 36778
Q ss_pred HHHHHHH-HHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecC
Q 022316 105 LADQIAE-VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP 152 (299)
Q Consensus 105 ~~~~l~~-~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~ 152 (299)
++++... +++..+.++++|+||||||.+|+.+|.++|+++.++++++.
T Consensus 69 ~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 69 LAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp HHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------CCE
T ss_pred HHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEE
Confidence 8877654 55666779999999999999999999999999988876653
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.87 E-value=1.5e-21 Score=152.61 Aligned_cols=211 Identities=15% Similarity=0.140 Sum_probs=127.6
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHH-HHHhcCC
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAE-VLNHFGL 118 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~-~l~~l~~ 118 (299)
..+|+|+|+||+..++.. ..| ..+...|..+++|+++|+||||.|..... .....+++++++++.+ +++..+.
T Consensus 58 ~~~~~l~c~~~~~~~g~~----~~y-~~la~~L~~~~~V~al~~pG~~~~~~~~~-~~~~~s~~~~a~~~~~~i~~~~~~ 131 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGP----HEF-LRLSTSFQEERDFLAVPLPGYGTGTGTGT-ALLPADLDTALDAQARAILRAAGD 131 (283)
T ss_dssp CCCCEEEEECCCCTTCST----TTT-HHHHHTTTTTCCEEEECCTTCCBC---CB-CCEESSHHHHHHHHHHHHHHHHTT
T ss_pred CCCceEEEeCCCCCCCCH----HHH-HHHHHhcCCCceEEEEeCCCCCCCCCCcc-ccccCCHHHHHHHHHHHHHHhcCC
Confidence 356899999986433322 112 45577888899999999999998764322 1223689999998765 6677888
Q ss_pred CcEEEEeeCccHHHHHHHHHHc----cCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhcccc
Q 022316 119 GAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEV 194 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (299)
++++|+||||||.||+++|.+. +++|.++|++++................. .......+...
T Consensus 132 ~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~- 197 (283)
T d2h7xa1 132 APVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLG-------------EGLFAGELEPM- 197 (283)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHH-------------HHHHHTCSSCC-
T ss_pred CceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhH-------------HHhhccccccc-
Confidence 9999999999999999999875 45799999999876554322211000000 00111111000
Q ss_pred ccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCce
Q 022316 195 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSA 272 (299)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~ 272 (299)
.......... ..+.+.. .....+++|+++|+|++|..+ +....+.+..+. ..+
T Consensus 198 -------~~~~l~a~~~------------~~~~~~~-----~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~-~~~ 252 (283)
T d2h7xa1 198 -------SDARLLAMGR------------YARFLAG-----PRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDL-PHT 252 (283)
T ss_dssp -------CHHHHHHHHH------------HHHHHHS-----CCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSS-CSE
T ss_pred -------ccHHHHHHHH------------HHHHHhh-----ccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCC-CcE
Confidence 1111111111 1111111 113568999999999999887 334444444443 367
Q ss_pred EEEEcCchhhhHh-HHHHHH----HHhhh
Q 022316 273 LVEVWTRVYISLL-GFLVLL----ASFCE 296 (299)
Q Consensus 273 ~~~~~~~~H~~~~-~f~~~~----~~~~~ 296 (299)
.+++|+ +|..++ +..+.+ ..|++
T Consensus 253 ~~~v~G-~H~~ml~e~~~~vA~~i~~~L~ 280 (283)
T d2h7xa1 253 VADVPG-DHFTMMRDHAPAVAEAVLSWLD 280 (283)
T ss_dssp EEEESS-CTTHHHHTTHHHHHHHHHHHHH
T ss_pred EEEEcC-CCcccccCCHHHHHHHHHHHHH
Confidence 888887 787554 555444 45554
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=7.9e-22 Score=144.86 Aligned_cols=174 Identities=13% Similarity=0.032 Sum_probs=113.9
Q ss_pred CeEEEecccccchhhhccccccCchhhh-cccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcE
Q 022316 43 PALVTYPDLALNYMSCFQGLFFCPEACS-LLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (299)
Q Consensus 43 p~lvl~HG~~~~~~~~~~~~~w~~~~~~-~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 121 (299)
..||++||++++..+ . |...+.. +...||+|+++|+||+|.+ ..+++.+.+...++..+ +++
T Consensus 2 k~V~~vHG~~~~~~~----~-~~~~l~~~L~~~G~~v~~~d~p~~~~~-----------~~~~~~~~l~~~~~~~~-~~~ 64 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTN----H-WFPWLKKRLLADGVQADILNMPNPLQP-----------RLEDWLDTLSLYQHTLH-ENT 64 (186)
T ss_dssp CEEEEECCTTCCTTS----T-THHHHHHHHHHTTCEEEEECCSCTTSC-----------CHHHHHHHHHTTGGGCC-TTE
T ss_pred CEEEEECCCCCCcch----h-HHHHHHHHHHhCCCEEEEeccCCCCcc-----------hHHHHHHHHHHHHhccC-CCc
Confidence 369999999887543 2 3233344 4456999999999999754 36677777776666544 789
Q ss_pred EEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCC
Q 022316 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 201 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (299)
+|+||||||.+++.++.++|......+++...+.......+. . ...+.
T Consensus 65 ~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~---~------------------~~~~~----------- 112 (186)
T d1uxoa_ 65 YLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ---M------------------LDEFT----------- 112 (186)
T ss_dssp EEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG---G------------------GGGGT-----------
T ss_pred EEEEechhhHHHHHHHHhCCccceeeEEeecccccccchhhh---h------------------hhhhh-----------
Confidence 999999999999999999987644444433332221110000 0 00000
Q ss_pred chHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCc
Q 022316 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTR 279 (299)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~ 279 (299)
..........++++|+++|+|++|.++ +.++.+++.++ +++++++++
T Consensus 113 ----------------------------~~~~~~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~~---~~~~~~~~~ 161 (186)
T d1uxoa_ 113 ----------------------------QGSFDHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQID---AALYEVQHG 161 (186)
T ss_dssp ----------------------------CSCCCHHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHTT---CEEEEETTC
T ss_pred ----------------------------cccccccccccCCCCEEEEecCCCCCCCHHHHHHHHHHcC---CEEEEeCCC
Confidence 001111222345789999999999998 66777777763 679999999
Q ss_pred hhhhHh-------HHHHHHHHhhh
Q 022316 280 VYISLL-------GFLVLLASFCE 296 (299)
Q Consensus 280 ~H~~~~-------~f~~~~~~~~~ 296 (299)
||.... +.++.+.+|++
T Consensus 162 gH~~~~~~~~~~~~~~~~l~~~~~ 185 (186)
T d1uxoa_ 162 GHFLEDEGFTSLPIVYDVLTSYFS 185 (186)
T ss_dssp TTSCGGGTCSCCHHHHHHHHHHHH
T ss_pred CCcCccccCcccHHHHHHHHHHHc
Confidence 996543 34566667765
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.86 E-value=1.4e-20 Score=149.83 Aligned_cols=230 Identities=12% Similarity=0.045 Sum_probs=135.4
Q ss_pred eeecCCc-eEEEEec---cCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC-
Q 022316 24 LIKTSHG-SLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP- 98 (299)
Q Consensus 24 ~i~~~~~-~l~~~~~---g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~- 98 (299)
.+++.+| +|+...+ +.++.|+||++||++.+... |...+..+..+||.|+++|+||||.|..+......
T Consensus 60 ~~~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~------~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~ 133 (318)
T d1l7aa_ 60 TYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDG------EIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGH 133 (318)
T ss_dssp EEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGG------GHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCC
T ss_pred EEECCCCcEEEEEEEecCCCCCceEEEEecCCCCCccc------hHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhh
Confidence 3444444 5654433 33455799999999877644 43455566678999999999999998653321110
Q ss_pred -------------cccHHHHHHHHHHH---HHhcC---CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcch
Q 022316 99 -------------VLSVDDLADQIAEV---LNHFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159 (299)
Q Consensus 99 -------------~~~~~~~~~~l~~~---l~~l~---~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~ 159 (299)
.........+.... +.... ..++.++|+|+||..++..+...+. +.+++...+.....
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 210 (318)
T d1l7aa_ 134 ALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNF-- 210 (318)
T ss_dssp SSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCH--
T ss_pred hhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEeccccccH--
Confidence 01122223333332 22322 2568999999999999999888764 66766655543221
Q ss_pred hHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhc
Q 022316 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 239 (299)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
..... . ................ .. .....+.+.. ... .+....++
T Consensus 211 ~~~~~-----~---~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~----------------~~~-~~~~~~~~ 255 (318)
T d1l7aa_ 211 ERAID-----V---ALEQPYLEINSFFRRN-GS---------PETEVQAMKT----------------LSY-FDIMNLAD 255 (318)
T ss_dssp HHHHH-----H---CCSTTTTHHHHHHHHS-CC---------HHHHHHHHHH----------------HHT-TCHHHHGG
T ss_pred HHHhh-----c---ccccccchhhhhhhcc-cc---------cccccccccc----------------ccc-cccccccc
Confidence 11000 0 0000000000000000 00 0000000000 001 23444567
Q ss_pred cccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 240 KLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 240 ~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+|++|+|+++|++|.++ +.+.++.+.++. .++++.+|++||....++.+++.+|+++.
T Consensus 256 ~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~-~~~l~~~~~~gH~~~~~~~~~~~~fl~~~ 315 (318)
T d1l7aa_ 256 RVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVYRYFGHEYIPAFQTEKLAFFKQI 315 (318)
T ss_dssp GCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEECCCCCcCHHHHHHHHHHcCC-CcEEEEECCCCCCCcHHHHHHHHHHHHHh
Confidence 89999999999999998 677788888864 48899999999998889988888888764
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.86 E-value=1.5e-21 Score=148.27 Aligned_cols=207 Identities=12% Similarity=-0.003 Sum_probs=114.5
Q ss_pred ccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc
Q 022316 37 YGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF 116 (299)
Q Consensus 37 ~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l 116 (299)
.+.+++++|||+||++++... | ..+.+.| .+|.|+++|++|+|.+ .++++++|.+ ..
T Consensus 12 ~~~~~~~~l~~lhg~~g~~~~------~-~~la~~L-~~~~v~~~~~~g~~~~------------a~~~~~~i~~---~~ 68 (230)
T d1jmkc_ 12 MNQDQEQIIFAFPPVLGYGLM------Y-QNLSSRL-PSYKLCAFDFIEEEDR------------LDRYADLIQK---LQ 68 (230)
T ss_dssp ESTTCSEEEEEECCTTCCGGG------G-HHHHHHC-TTEEEEEECCCCSTTH------------HHHHHHHHHH---HC
T ss_pred ecCCCCCeEEEEcCCCCCHHH------H-HHHHHHC-CCCEEeccCcCCHHHH------------HHHHHHHHHH---hC
Confidence 343477899999999998855 6 4445666 4799999999998632 3444444332 34
Q ss_pred CCCcEEEEeeCccHHHHHHHHHHccCcccE---EEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccc
Q 022316 117 GLGAVMCMGVTAGAYILTLFAMKYRHRVLG---LILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE 193 (299)
Q Consensus 117 ~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~---lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (299)
+.++++|+||||||.+|+.+|.++|+++.. ++.+++............ . ..... . .........
T Consensus 69 ~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~--~------~~~~~----~-~~~~~~~~~ 135 (230)
T d1jmkc_ 69 PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR--T------VESDV----E-ALMNVNRDN 135 (230)
T ss_dssp CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC----------------CCH----H-HHHHHTTTC
T ss_pred CCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhh--h------hhhhh----h-hhhhccccc
Confidence 557899999999999999999988876544 444444332211110000 0 00000 0 011111111
Q ss_pred cccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-hhhHHHhhhccccCce
Q 022316 194 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSA 272 (299)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~ 272 (299)
.... .+...+.+..... ...... .......++++|+++|+|++|..+ .......+... .+.+
T Consensus 136 ~~~~----~~~~~~~~~~~~~--------~~~~~~----~~~~~~~~i~~p~l~i~g~~D~~~~~~~~~w~~~~~-~~~~ 198 (230)
T d1jmkc_ 136 EALN----SEAVKHGLKQKTH--------AFYSYY----VNLISTGQVKADIDLLTSGADFDIPEWLASWEEATT-GAYR 198 (230)
T ss_dssp SGGG----SHHHHHHHHHHHH--------HHHHHH----HHCCCCSCBSSEEEEEECSSCCCCCTTEECSGGGBS-SCEE
T ss_pred cccc----cHHHHHHHHHHHH--------HHHHhh----hcccccccccCcceeeeecCCcccchhHHHHHHhcc-CCcE
Confidence 0000 1222222222111 011110 111234678999999999999987 33333333333 3478
Q ss_pred EEEEcCchhhhHhH--HHHHHHHhhhh
Q 022316 273 LVEVWTRVYISLLG--FLVLLASFCES 297 (299)
Q Consensus 273 ~~~~~~~~H~~~~~--f~~~~~~~~~~ 297 (299)
.+++++ +|..+++ .+++++..+.+
T Consensus 199 ~~~i~g-~H~~ml~~~~~~~va~~I~~ 224 (230)
T d1jmkc_ 199 MKRGFG-THAEMLQGETLDRNAGILLE 224 (230)
T ss_dssp EEECSS-CGGGTTSHHHHHHHHHHHHH
T ss_pred EEEEcC-CChhhcCCccHHHHHHHHHH
Confidence 888885 9997764 45666655543
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=3.4e-21 Score=140.15 Aligned_cols=101 Identities=10% Similarity=0.061 Sum_probs=83.9
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCcE
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 121 (299)
+|||||+||++.+... |......+..+||+|+.+|.+|++.+... ...+.+++++++.++++.++.+++
T Consensus 2 ~~PVv~vHG~~~~~~~------~~~l~~~l~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~i~~~~~~~~~~~v 70 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFN------FAGIKSYLVSQGWSRDKLYAVDFWDKTGT-----NYNNGPVLSRFVQKVLDETGAKKV 70 (179)
T ss_dssp CCCEEEECCTTCCGGG------GHHHHHHHHHTTCCGGGEEECCCSCTTCC-----HHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred CCCEEEECCCCCCHHH------HHHHHHHHHHcCCeEEEEecCCccccccc-----cchhhhhHHHHHHHHHHhcCCceE
Confidence 4679999999988744 64554445567999999999999987432 236778889999999999999999
Q ss_pred EEEeeCccHHHHHHHHHHc--cCcccEEEEecCC
Q 022316 122 MCMGVTAGAYILTLFAMKY--RHRVLGLILVSPL 153 (299)
Q Consensus 122 ~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~ 153 (299)
+++||||||.++..++.++ |++|+++|+++++
T Consensus 71 ~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p 104 (179)
T d1ispa_ 71 DIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGA 104 (179)
T ss_dssp EEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCC
T ss_pred EEEeecCcCHHHHHHHHHcCCchhhCEEEEECCC
Confidence 9999999999999999876 6789999999875
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.83 E-value=8.5e-20 Score=141.07 Aligned_cols=225 Identities=9% Similarity=-0.003 Sum_probs=135.4
Q ss_pred cceeecCCc-eEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCC--
Q 022316 22 DNLIKTSHG-SLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS-- 94 (299)
Q Consensus 22 ~~~i~~~~~-~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-- 94 (299)
..++++.+| +|....+-+ .+.|+||++||.+..... .. |......+..+||.|+++|+||+|.+.....
T Consensus 14 ~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~---~~-~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~ 89 (260)
T d2hu7a2 14 LVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDS---DS-WDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLK 89 (260)
T ss_dssp EEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCC---SS-CCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHT
T ss_pred EEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCC---cc-ccHHHHHHHhhccccccceeeeccccccccccc
Confidence 335666555 776554432 234689999985433211 12 4344444556799999999999976533111
Q ss_pred --CCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 95 --DDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 95 --~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
.......++|+.+.+..+.+....+++.++|+|+||..++.++..+|+.+++++..++.........
T Consensus 90 ~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~----------- 158 (260)
T d2hu7a2 90 IIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYE----------- 158 (260)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHHHH-----------
T ss_pred cccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhhhhc-----------
Confidence 0111123455555555555555557899999999999999999999999999998887653211100
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 252 (299)
. ..... .......... +.+.. .. .+....++++++|+|+++|++
T Consensus 159 --~-~~~~~-~~~~~~~~~~---------~~~~~---~~--------------------~~~~~~~~~~~~P~liihG~~ 202 (260)
T d2hu7a2 159 --L-SDAAF-RNFIEQLTGG---------SREIM---RS--------------------RSPINHVDRIKEPLALIHPQN 202 (260)
T ss_dssp --T-CCHHH-HHHHHHHHCS---------CHHHH---HH--------------------TCGGGCGGGCCSCEEEEEETT
T ss_pred --c-ccccc-cccccccccc---------ccccc---cc--------------------cchhhcccccCCCceeeeccc
Confidence 0 00000 0011111000 01110 00 223344678899999999999
Q ss_pred Ccch--hhhHHHhhhcc--ccCceEEEEcCchhhhH-----hHHHHHHHHhhhh
Q 022316 253 SPFH--SEAVHMTSKID--RRYSALVEVWTRVYISL-----LGFLVLLASFCES 297 (299)
Q Consensus 253 D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~~-----~~f~~~~~~~~~~ 297 (299)
|.++ +.+..+.+.+. +..++++++|+++|... .++++....|+++
T Consensus 203 D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~ 256 (260)
T d2hu7a2 203 DSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLAT 256 (260)
T ss_dssp CSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHH
T ss_pred CceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHHH
Confidence 9987 67777777653 34578999999999532 3566666677654
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.81 E-value=4.2e-19 Score=140.72 Aligned_cols=115 Identities=14% Similarity=0.105 Sum_probs=91.6
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCc
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (299)
.+.||||+||++++........+|......+..+||+|+++|+||+|.|+.. ..+.++++++|.++++.++.++
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~------~~~~~~l~~~i~~~~~~~~~~~ 80 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGP------NGRGEQLLAYVKQVLAATGATK 80 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTST------TSHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCC------cccHHHHHHHHHHHHHHhCCCC
Confidence 3446999999987654433333465554444456899999999999988532 2578899999999999999999
Q ss_pred EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH
Q 022316 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (299)
Q Consensus 121 ~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (299)
+++|||||||.++..++.++|++|+++|+++++........
T Consensus 81 v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~gs~~ad 121 (319)
T d1cvla_ 81 VNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGSEFAD 121 (319)
T ss_dssp EEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHH
T ss_pred EEEEeccccHHHHHHHHHHCccccceEEEECCCCCCChHHH
Confidence 99999999999999999999999999999998766544433
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.79 E-value=6.1e-18 Score=134.64 Aligned_cols=211 Identities=8% Similarity=-0.034 Sum_probs=120.5
Q ss_pred CceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCC-------
Q 022316 29 HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE------- 97 (299)
Q Consensus 29 ~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~------- 97 (299)
+.+|+...+-+ ++.|+||++||++.+... | .....+.+.||.|+++|+||+|.|........
T Consensus 65 G~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~------~-~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~ 137 (322)
T d1vlqa_ 65 GQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGF------P-HDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVD 137 (322)
T ss_dssp GCEEEEEEEEECCSCSSEEEEEECCCTTCCCCC------G-GGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBC
T ss_pred CcEEEEEEEeccCCCCCccEEEEecCCCCCcCc------H-HHHHHHHhCCCEEEEeeccccCCCCCCcccccccccccc
Confidence 44776555432 234789999998765422 3 33345667899999999999998854311000
Q ss_pred --------------CcccHHHHHHHHHHHHHhc----C--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 98 --------------PVLSVDDLADQIAEVLNHF----G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 98 --------------~~~~~~~~~~~l~~~l~~l----~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
..........|....++.+ . .+++.++|+|+||.+++..+...| ++++++...+.....
T Consensus 138 ~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~~ 216 (322)
T d1vlqa_ 138 PQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHF 216 (322)
T ss_dssp CCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCH
T ss_pred ccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCccccH
Confidence 0011222233333333322 2 257899999999999998877765 688888766544321
Q ss_pred chhHHHHhhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhh
Q 022316 158 SWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEG 237 (299)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
..... ........ ....+...... . .+...+ .... .+....
T Consensus 217 ~~~~~-----------~~~~~~~~---~~~~~~~~~~~-~----~~~~~~-------------------~~~~-~d~~~~ 257 (322)
T d1vlqa_ 217 RRAVQ-----------LVDTHPYA---EITNFLKTHRD-K----EEIVFR-------------------TLSY-FDGVNF 257 (322)
T ss_dssp HHHHH-----------HCCCTTHH---HHHHHHHHCTT-C----HHHHHH-------------------HHHT-TCHHHH
T ss_pred HHHHh-----------hccccchh---hHHhhhhcCcc-h----hhhHHH-------------------Hhhh-hhHHHH
Confidence 11000 00000000 00000000000 0 011111 0101 344455
Q ss_pred hccccccEEEEecCCCcch--hhhHHHhhhccccCceEEEEcCchhhhHhHH
Q 022316 238 LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVWTRVYISLLGF 287 (299)
Q Consensus 238 ~~~i~~P~lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~f 287 (299)
+.+|++|+|+++|++|.++ +.+..+.++++.. ++++++|+++|....++
T Consensus 258 a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~-~~l~~~p~~~H~~~~~~ 308 (322)
T d1vlqa_ 258 AARAKIPALFSVGLMDNICPPSTVFAAYNYYAGP-KEIRIYPYNNHEGGGSF 308 (322)
T ss_dssp HTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSS-EEEEEETTCCTTTTHHH
T ss_pred HhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCC-eEEEEECCCCCCCcccc
Confidence 6789999999999999998 6677777777643 88999999999654443
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=3.5e-18 Score=129.11 Aligned_cols=181 Identities=10% Similarity=0.086 Sum_probs=117.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCC---------C-----CCCCCCCCCcccHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF---------G-----AAAISDDEPVLSVDDLA 106 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~---------S-----~~~~~~~~~~~~~~~~~ 106 (299)
..++|||+||+|.+... |...+..+...++.+++++-|.+.. + ............+++.+
T Consensus 20 ~~~~VI~lHG~G~~~~~------~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~ 93 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHG------WAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAA 93 (229)
T ss_dssp CSEEEEEECCSSSCHHH------HHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHH------HHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHH
Confidence 45689999999998755 4344444556789999988653210 0 00000001112244445
Q ss_pred HHHHHHHHh-----cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHH
Q 022316 107 DQIAEVLNH-----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVV 181 (299)
Q Consensus 107 ~~l~~~l~~-----l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (299)
+.|..+++. +..++++++|+|+||.+|+.++.++|+++++++.+++.......
T Consensus 94 ~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~---------------------- 151 (229)
T d1fj2a_ 94 ENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS---------------------- 151 (229)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG----------------------
T ss_pred HHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccccccccc----------------------
Confidence 555555443 23478999999999999999999999999999998763211000
Q ss_pred HHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhh
Q 022316 182 KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEA 259 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~ 259 (299)
+.... ....+.++|+++++|++|.++ +.+
T Consensus 152 --------~~~~~-----------------------------------------~~~~~~~~Pvli~hG~~D~~vp~~~~ 182 (229)
T d1fj2a_ 152 --------FPQGP-----------------------------------------IGGANRDISILQCHGDCDPLVPLMFG 182 (229)
T ss_dssp --------SCSSC-----------------------------------------CCSTTTTCCEEEEEETTCSSSCHHHH
T ss_pred --------ccccc-----------------------------------------cccccccCceeEEEcCCCCeeCHHHH
Confidence 00000 000122579999999999997 445
Q ss_pred HHHhhhc----cccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 260 VHMTSKI----DRRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 260 ~~~~~~~----~~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
++..+.+ .+.+++++++++.||....+-++.+.+|+++.
T Consensus 183 ~~~~~~L~~~~~~~~v~~~~~~g~gH~i~~~~~~~~~~wL~~~ 225 (229)
T d1fj2a_ 183 SLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKL 225 (229)
T ss_dssp HHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEEEeCCCCCccCHHHHHHHHHHHHhH
Confidence 4444433 33457899999999999888888899998864
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.78 E-value=6.9e-18 Score=129.47 Aligned_cols=104 Identities=18% Similarity=0.188 Sum_probs=80.9
Q ss_pred CCCCeEEEecccc--cchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHH-Hhc
Q 022316 40 QDKPALVTYPDLA--LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL-NHF 116 (299)
Q Consensus 40 ~~~p~lvl~HG~~--~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l-~~l 116 (299)
+.+|+|+|+||.. ++... | ..+...|...+.|+++|+||+|.+... ..+++++++++.+.+ +..
T Consensus 40 ~~~~~l~c~~~~~~gg~~~~------y-~~La~~L~~~~~V~al~~pG~~~~e~~------~~s~~~~a~~~~~~i~~~~ 106 (255)
T d1mo2a_ 40 PGEVTVICCAGTAAISGPHE------F-TRLAGALRGIAPVRAVPQPGYEEGEPL------PSSMAAVAAVQADAVIRTQ 106 (255)
T ss_dssp SCSSEEEEECCCSSSCSGGG------G-HHHHHHHTTTCCEEEECCTTSSTTCCE------ESSHHHHHHHHHHHHHHTT
T ss_pred CCCCeEEEECCCCCCCCHHH------H-HHHHHhcCCCceEEEEeCCCcCCCCCC------CCCHHHHHHHHHHHHHHhC
Confidence 4678899999842 33222 3 445677888899999999999977421 368999999887655 556
Q ss_pred CCCcEEEEeeCccHHHHHHHHHHcc---CcccEEEEecCCCCC
Q 022316 117 GLGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKA 156 (299)
Q Consensus 117 ~~~~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~~~~ 156 (299)
+.++++|+||||||.+|+++|.+.+ .+|..++++++....
T Consensus 107 ~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~ 149 (255)
T d1mo2a_ 107 GDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPG 149 (255)
T ss_dssp SSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSS
T ss_pred CCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCC
Confidence 6789999999999999999998764 459999999986543
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.77 E-value=8.9e-19 Score=136.02 Aligned_cols=111 Identities=13% Similarity=0.051 Sum_probs=89.1
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCc
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (299)
++.||||+||+++........ +|......+...||+|+++|+||+|.+ ..+.++++++|.++++.++.++
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~-yw~~i~~~L~~~G~~v~~~~~~~~~~~---------~~~a~~l~~~i~~~~~~~g~~~ 75 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVD-YWFGIPSALRRDGAQVYVTEVSQLDTS---------EVRGEQLLQQVEEIVALSGQPK 75 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEE-SSTTHHHHHHHTTCCEEEECCCSSSCH---------HHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCEEEECCCCCCccccchh-hHHHHHHHHHhCCCEEEEeCCCCCCCc---------HHHHHHHHHHHHHHHHHcCCCe
Confidence 344699999987765332222 365554444556999999999999855 3677889999999999999999
Q ss_pred EEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhH
Q 022316 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (299)
Q Consensus 121 ~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (299)
+++|||||||.++..++.++|++|+++|.++++........
T Consensus 76 v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh~Gs~~ad 116 (285)
T d1ex9a_ 76 VNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTAD 116 (285)
T ss_dssp EEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHH
T ss_pred EEEEEECccHHHHHHHHHHCCccceeEEEECCCCCCCHHHH
Confidence 99999999999999999999999999999998766544433
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.76 E-value=5.9e-21 Score=151.84 Aligned_cols=109 Identities=13% Similarity=0.062 Sum_probs=76.3
Q ss_pred eeecCCceEEEEeccCCCCCeEEEecccccchhhhccccccCc-------hhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCP-------EACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~-------~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
.+..+...+.|....+++++||||+||++.++.. |.. .+..++++||+|+++|+||||+|..+.
T Consensus 40 ~~~~~~~~v~~~~p~~~~~~PvvllHG~~~~~~~------w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~--- 110 (318)
T d1qlwa_ 40 TVTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMT------WETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDI--- 110 (318)
T ss_dssp EEEESCEEEEEEEETTCCSSCEEEECCTTCCGGG------GSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCC---
T ss_pred ceeeceEEEEEECCCCCCCCcEEEECCCCCCcCc------cccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCcc---
Confidence 3444444566666665677789999999988755 422 234567889999999999999996421
Q ss_pred CCcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccC
Q 022316 97 EPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRH 142 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~ 142 (299)
...+..++++++.+.++.+.. .+..++|||+||.++..++...+.
T Consensus 111 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~ 157 (318)
T d1qlwa_ 111 -SAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFP 157 (318)
T ss_dssp -HHHHHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSC
T ss_pred -ccCCHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCc
Confidence 235566666666666665543 457789999999998887765543
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.75 E-value=1.7e-17 Score=122.97 Aligned_cols=177 Identities=14% Similarity=0.202 Sum_probs=120.5
Q ss_pred CCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCC--CCCCcccHHH-------HHHHH
Q 022316 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS--DDEPVLSVDD-------LADQI 109 (299)
Q Consensus 39 ~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~-------~~~~l 109 (299)
+++.|+||++||++.+... | ..+.+.+.+++.|++++.+..+....... ......+..+ +.+.+
T Consensus 11 ~~~~P~vi~lHG~g~~~~~------~-~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 83 (202)
T d2h1ia1 11 DTSKPVLLLLHGTGGNELD------L-LPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFL 83 (202)
T ss_dssp CTTSCEEEEECCTTCCTTT------T-HHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHH------H-HHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHH
Confidence 3567999999999877643 3 33456677899999998655443211100 0011223333 33333
Q ss_pred HHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHHHHH
Q 022316 110 AEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (299)
Q Consensus 110 ~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (299)
..+.+..++ .++.++|+|+||.+++.++.++|+++.+++++++......
T Consensus 84 ~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~----------------------------- 134 (202)
T d2h1ia1 84 DEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG----------------------------- 134 (202)
T ss_dssp HHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-----------------------------
T ss_pred HHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccc-----------------------------
Confidence 344455554 5899999999999999999999999999998876322100
Q ss_pred hhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHHhhh
Q 022316 188 RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSK 265 (299)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~~~~ 265 (299)
.........|+++++|++|.++ +.++++.+.
T Consensus 135 -----------------------------------------------~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~ 167 (202)
T d2h1ia1 135 -----------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVL 167 (202)
T ss_dssp -----------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHH
T ss_pred -----------------------------------------------ccccccccchhhcccccCCCccCHHHHHHHHHH
Confidence 0001123568999999999997 566666666
Q ss_pred ccc--cCceEEEEcCchhhhHhHHHHHHHHhhhhcC
Q 022316 266 IDR--RYSALVEVWTRVYISLLGFLVLLASFCESEF 299 (299)
Q Consensus 266 ~~~--~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~~ 299 (299)
+.. ..++++++|+ ||..-.+.++.+..|+++.|
T Consensus 168 l~~~g~~~~~~~~~g-gH~~~~~~~~~~~~wl~k~f 202 (202)
T d2h1ia1 168 LENANANVTMHWENR-GHQLTMGEVEKAKEWYDKAF 202 (202)
T ss_dssp HHTTTCEEEEEEESS-TTSCCHHHHHHHHHHHHHHC
T ss_pred HHHCCCCEEEEEECC-CCcCCHHHHHHHHHHHHHhC
Confidence 532 2478889986 89988899999999999876
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.75 E-value=8.6e-18 Score=125.16 Aligned_cols=185 Identities=9% Similarity=-0.003 Sum_probs=119.5
Q ss_pred CceEEEEecc--CCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCC--CCCCCCCCCCCCcccHHH
Q 022316 29 HGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH--EFGAAAISDDEPVLSVDD 104 (299)
Q Consensus 29 ~~~l~~~~~g--~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~--G~S~~~~~~~~~~~~~~~ 104 (299)
+-.+.|+..+ .++.|+||++||.+.+... | ..+.+.+.+++.+++++.+.. |.............+.++
T Consensus 8 ~~~~~~~~~~~~~~~~p~vv~lHG~g~~~~~------~-~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (209)
T d3b5ea1 8 DLAFPYRLLGAGKESRECLFLLHGSGVDETT------L-VPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKS 80 (209)
T ss_dssp SSSSCEEEESTTSSCCCEEEEECCTTBCTTT------T-HHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHH
T ss_pred CCcceeEecCCCCCCCCEEEEEcCCCCCHHH------H-HHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhh
Confidence 3334455544 3567999999999988644 4 334566777899999875421 100000000011223233
Q ss_pred -------HHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhh
Q 022316 105 -------LADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (299)
Q Consensus 105 -------~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (299)
+.+.|..+.++.++ ++++++|||+||.+++.++.++|+++++++++++.....
T Consensus 81 ~~~~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~------------------ 142 (209)
T d3b5ea1 81 ILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------------------ 142 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCccccc------------------
Confidence 33334444445444 689999999999999999999999999999988743210
Q ss_pred cchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcc
Q 022316 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 255 (299)
. . ......++|+++++|++|++
T Consensus 143 -----------------~--------------------------------------~---~~~~~~~~p~~~~~G~~D~~ 164 (209)
T d3b5ea1 143 -----------------H--------------------------------------V---PATDLAGIRTLIIAGAADET 164 (209)
T ss_dssp -----------------S--------------------------------------C---CCCCCTTCEEEEEEETTCTT
T ss_pred -----------------c--------------------------------------c---cccccccchheeeeccCCCc
Confidence 0 0 00112357999999999999
Q ss_pred h-hhhHHHhhhcc--ccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 256 H-SEAVHMTSKID--RRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 256 ~-~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
+ +.+.++.+.+. +..++++++++ ||..-.+.++.+..|+..
T Consensus 165 ~~~~~~~~~~~l~~~G~~v~~~~~~g-gH~i~~~~~~~~~~wl~~ 208 (209)
T d3b5ea1 165 YGPFVPALVTLLSRHGAEVDARIIPS-GHDIGDPDAAIVRQWLAG 208 (209)
T ss_dssp TGGGHHHHHHHHHHTTCEEEEEEESC-CSCCCHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHCCCCeEEEEECC-CCCCCHHHHHHHHHHhCC
Confidence 8 55566665542 33478899987 798877777777777753
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.74 E-value=1.6e-16 Score=122.36 Aligned_cols=227 Identities=11% Similarity=0.052 Sum_probs=127.7
Q ss_pred ceeecCCceEEEEeccCC----CC--CeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCC---
Q 022316 23 NLIKTSHGSLSVTIYGDQ----DK--PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI--- 93 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~----~~--p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--- 93 (299)
.++..++.++.|..+-|+ ++ |+||++||.+....+..... .......+..+||.|+.+|.||.|.+....
T Consensus 7 ~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~-~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~~ 85 (258)
T d2bgra2 7 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFR-LNWATYLASTENIIVASFDGRGSGYQGDKIMHA 85 (258)
T ss_dssp EEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCC-CSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGG
T ss_pred EEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccC-cCHHHHHHhcCCcEEEeecccccCCcchHHHHh
Confidence 355668889999887442 12 78999999533222111111 101111233569999999999987443110
Q ss_pred -CCCCCcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhh
Q 022316 94 -SDDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (299)
Q Consensus 94 -~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (299)
.........++..+.+..+.+...+ +++.++|+|+||.+++.++..+|+.+...+..++...........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 158 (258)
T d2bgra2 86 INRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVY------- 158 (258)
T ss_dssp GTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHH-------
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccccccc-------
Confidence 0001111233333333333333332 469999999999999999999999888877766644322111100
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccc-cccEEEEe
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFV 249 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~ 249 (299)
.......... ....+.... .+......++ ++|+++++
T Consensus 159 ---------------~~~~~~~~~~-------~~~~~~~~~--------------------~~~~~~~~~~~~~P~li~h 196 (258)
T d2bgra2 159 ---------------TERYMGLPTP-------EDNLDHYRN--------------------STVMSRAENFKQVEYLLIH 196 (258)
T ss_dssp ---------------HHHHHCCCST-------TTTHHHHHH--------------------SCSGGGGGGGGGSEEEEEE
T ss_pred ---------------cchhcccccc-------hhhHHHhhc--------------------ccccccccccccCChheee
Confidence 0000000000 000011111 1111223333 37999999
Q ss_pred cCCCcch--hhhHHHhhhcc--ccCceEEEEcCchhhh-----HhHHHHHHHHhhhhcC
Q 022316 250 GESSPFH--SEAVHMTSKID--RRYSALVEVWTRVYIS-----LLGFLVLLASFCESEF 299 (299)
Q Consensus 250 G~~D~~~--~~~~~~~~~~~--~~~~~~~~~~~~~H~~-----~~~f~~~~~~~~~~~~ 299 (299)
|++|..+ ..+.++.+.+. +..++++++|+++|.. ..++.+.+..|+++-|
T Consensus 197 G~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~l 255 (258)
T d2bgra2 197 GTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCF 255 (258)
T ss_dssp ETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHHh
Confidence 9999987 56777766652 3458899999999953 2356777788887643
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.74 E-value=5.8e-17 Score=125.11 Aligned_cols=112 Identities=15% Similarity=0.105 Sum_probs=76.4
Q ss_pred eecCCceEEEEeccCCCCCeEEEecccccchhhhcccccc--Cchhhhc-ccCceEEEEECCCCCCCCCCCCCCCCCccc
Q 022316 25 IKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF--CPEACSL-LLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (299)
Q Consensus 25 i~~~~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w--~~~~~~~-l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (299)
+..-...+.+...+++++|+||++||.|..........++ ...+... ...||.|+.+|+|..+... . ...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~--~-----~~~ 86 (263)
T d1vkha_ 14 ITLFNKTLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT--N-----PRN 86 (263)
T ss_dssp TTCGGGCEEEECCCTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC--T-----THH
T ss_pred eeeecceEEeccCCCCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchh--h-----hHH
Confidence 3333445667766667789999999965321111111110 1122233 3569999999999775431 1 256
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHccCc
Q 022316 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143 (299)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~ 143 (299)
++|..+.+..+++..+.++++|+|||+||.+++.++...++.
T Consensus 87 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~ 128 (263)
T d1vkha_ 87 LYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDP 128 (263)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSC
T ss_pred HHhhhhhhhcccccccccceeeeccCcHHHHHHHHHHhccCc
Confidence 788888888888888889999999999999999998877653
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.74 E-value=6.4e-17 Score=119.91 Aligned_cols=185 Identities=20% Similarity=0.176 Sum_probs=126.8
Q ss_pred CceEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCC--CCCCcccHHHH-
Q 022316 29 HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS--DDEPVLSVDDL- 105 (299)
Q Consensus 29 ~~~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~- 105 (299)
++-++....|.++.|+||++||.+.+... |.+ +.+.+.+++.|+.++.+..+.+..... ........+++
T Consensus 4 ~~y~~~~~~~~~~~P~vi~lHG~G~~~~~------~~~-~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (203)
T d2r8ba1 4 DSYFHKSRAGVAGAPLFVLLHGTGGDENQ------FFD-FGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLE 76 (203)
T ss_dssp TSSCEEEECCCTTSCEEEEECCTTCCHHH------HHH-HHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHH
T ss_pred ceeEeecCCCCCCCCEEEEECCCCCCHHH------HHH-HHHHhccCCeEEEeccccccccccccccccCccccchhHHH
Confidence 44456666777789999999999887644 423 355667789999998776554322111 11112223332
Q ss_pred --HHHHHHHH----HhcCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchh
Q 022316 106 --ADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (299)
Q Consensus 106 --~~~l~~~l----~~l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
.+.+..++ ...+.+++.++|+|+||.+++.++.++|+.+.+++++++.......
T Consensus 77 ~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~-------------------- 136 (203)
T d2r8ba1 77 RATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK-------------------- 136 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC--------------------
T ss_pred HHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc--------------------
Confidence 33333333 3456789999999999999999999999999999998874421100
Q ss_pred HHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--h
Q 022316 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 257 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~ 257 (299)
. . ......|+++++|++|+++ +
T Consensus 137 --------------~-----------------------------------~-------~~~~~~~~~i~hG~~D~~vp~~ 160 (203)
T d2r8ba1 137 --------------I-----------------------------------S-------PAKPTRRVLITAGERDPICPVQ 160 (203)
T ss_dssp --------------C-----------------------------------C-------CCCTTCEEEEEEETTCTTSCHH
T ss_pred --------------c-----------------------------------c-------cccccchhhccccCCCCcccHH
Confidence 0 0 0123458999999999998 6
Q ss_pred hhHHHhhhcc--ccCceEEEEcCchhhhHhHHHHHHHHhhhh
Q 022316 258 EAVHMTSKID--RRYSALVEVWTRVYISLLGFLVLLASFCES 297 (299)
Q Consensus 258 ~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~ 297 (299)
.++++.+.+. +..++++++++ ||..-.+.++.+..|+.+
T Consensus 161 ~~~~~~~~L~~~g~~v~~~~~~g-gH~~~~~~~~~~~~wl~~ 201 (203)
T d2r8ba1 161 LTKALEESLKAQGGTVETVWHPG-GHEIRSGEIDAVRGFLAA 201 (203)
T ss_dssp HHHHHHHHHHHHSSEEEEEEESS-CSSCCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHCCCCEEEEEECC-CCcCCHHHHHHHHHHHHh
Confidence 6777776653 23467899986 799888889999998865
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.73 E-value=9.6e-17 Score=125.03 Aligned_cols=107 Identities=11% Similarity=0.091 Sum_probs=86.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCc
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (299)
.++||||+||++.++.. .+|......+...||+|+.+|+||+|.++. ..+.+++++.|..+++..+.++
T Consensus 30 ~~~PVvlvHG~~~~~~~----~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~-------~~sae~la~~i~~v~~~~g~~k 98 (317)
T d1tcaa_ 30 VSKPILLVPGTGTTGPQ----SFDSNWIPLSTQLGYTPCWISPPPFMLNDT-------QVNTEYMVNAITALYAGSGNNK 98 (317)
T ss_dssp CSSEEEEECCTTCCHHH----HHTTTHHHHHHTTTCEEEEECCTTTTCSCH-------HHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCCcEEEECCCCCCCcc----hhHHHHHHHHHhCCCeEEEecCCCCCCCch-------HhHHHHHHHHHHHHHHhccCCc
Confidence 45689999999887654 224334344445699999999999987742 3567888888899999999999
Q ss_pred EEEEeeCccHHHHHHHHHHccC---cccEEEEecCCCCCcc
Q 022316 121 VMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPS 158 (299)
Q Consensus 121 ~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~~~~~ 158 (299)
+.||||||||.++..++.++|+ +|+.+|.++++.....
T Consensus 99 V~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt~ 139 (317)
T d1tcaa_ 99 LPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTV 139 (317)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBG
T ss_pred eEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCCCcc
Confidence 9999999999999999999884 6999999999776543
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=2.7e-16 Score=120.96 Aligned_cols=223 Identities=12% Similarity=0.101 Sum_probs=124.3
Q ss_pred ceeecCCceEEEEeccCC-----C-CCeEEEecccccchhhhccccccCc--hhhhcccCceEEEEECCCCCCCCCC---
Q 022316 23 NLIKTSHGSLSVTIYGDQ-----D-KPALVTYPDLALNYMSCFQGLFFCP--EACSLLLHNFCIYHINPPGHEFGAA--- 91 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~-----~-~p~lvl~HG~~~~~~~~~~~~~w~~--~~~~~l~~~~~vi~~D~~G~G~S~~--- 91 (299)
+.++.++.+|+...+-|. + -|+||++||.+..... .. . |.. ....+...||.|+++|.||.+.+..
T Consensus 6 ~~i~~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~-~~-~-~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~ 82 (258)
T d1xfda2 6 RDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSV-AE-K-FEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLL 82 (258)
T ss_dssp CCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCC-CC-C-CCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHH
T ss_pred EEEeeCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCc-CC-C-cCcchHHHHHhcCCcEEEEeccccccccchhHh
Confidence 456778888876655431 2 3789999996432211 11 1 211 1122345699999999998653211
Q ss_pred -CCCCCCCcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccC----cccEEEEecCCCCCcchhHHHH
Q 022316 92 -AISDDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLY 164 (299)
Q Consensus 92 -~~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~ 164 (299)
...........++..+.+..+++...+ +++.++|+|+||.+++.++...++ .++..+.+++...........
T Consensus 83 ~~~~~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 161 (258)
T d1xfda2 83 HEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAF- 161 (258)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHH-
T ss_pred hhhhccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecccccc-
Confidence 111111123355555555555555443 679999999999999988766654 355555555533322111100
Q ss_pred hhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcc-ccc
Q 022316 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK-LQC 243 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~ 243 (299)
...++..... ++ .. + ........+.+ .++
T Consensus 162 ---------------------~~~~~~~~~~------~~---------------~~-------~-~~~s~~~~~~~~~~~ 191 (258)
T d1xfda2 162 ---------------------SERYLGLHGL------DN---------------RA-------Y-EMTKVAHRVSALEEQ 191 (258)
T ss_dssp ---------------------HHHHHCCCSS------CC---------------SS-------T-TTTCTHHHHTSCCSC
T ss_pred ---------------------cccccccccc------ch---------------HH-------h-hccchhhhhhhhhcc
Confidence 0000100000 00 00 0 00111222233 368
Q ss_pred cEEEEecCCCcch--hhhHHHhhhc--cccCceEEEEcCchhhh-----HhHHHHHHHHhhhhcC
Q 022316 244 RSLIFVGESSPFH--SEAVHMTSKI--DRRYSALVEVWTRVYIS-----LLGFLVLLASFCESEF 299 (299)
Q Consensus 244 P~lii~G~~D~~~--~~~~~~~~~~--~~~~~~~~~~~~~~H~~-----~~~f~~~~~~~~~~~~ 299 (299)
|+|+++|+.|..+ +.+.++.+.+ .+.+++++++|+++|.. ..++.+.+.+|+++.|
T Consensus 192 p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~~ 256 (258)
T d1xfda2 192 QFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 256 (258)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred cccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHhh
Confidence 9999999999987 5666666554 23457899999999953 2346677888887754
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.69 E-value=2.9e-15 Score=111.84 Aligned_cols=195 Identities=10% Similarity=0.037 Sum_probs=123.2
Q ss_pred ceeecCCceEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcc
Q 022316 23 NLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (299)
Q Consensus 23 ~~i~~~~~~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (299)
..|+.+.|+|.....-+ +..+++|++||.+..+.+..+... ......+...||.|+.+|+||.|.|..... ....
T Consensus 3 v~i~g~~G~Le~~~~~~~~~~~~~~l~~Hp~p~~GG~~~~~~~-~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~--~~~~ 79 (218)
T d2i3da1 3 VIFNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIV-YQLFYLFQKRGFTTLRFNFRSIGRSQGEFD--HGAG 79 (218)
T ss_dssp EEEEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHH-HHHHHHHHHTTCEEEEECCTTSTTCCSCCC--SSHH
T ss_pred EEEeCCCccEEEEEeCCCCCCCCEEEEECCCcCcCCcCCcHHH-HHHHHHHHhcCeeEEEEecCccCCCccccc--cchh
Confidence 35667778887554432 345789999997665544333321 122233445699999999999999965432 2222
Q ss_pred cHHHHHHHHHHHHHhcC-CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchh
Q 022316 101 SVDDLADQIAEVLNHFG-LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (299)
Q Consensus 101 ~~~~~~~~l~~~l~~l~-~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
..+|....+..+..... ..++.++|+|+||.++..++.+.+ .+.+++++.+......
T Consensus 80 e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~--------------------- 137 (218)
T d2i3da1 80 ELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYD--------------------- 137 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSC---------------------
T ss_pred HHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhc-cccceeeccccccccc---------------------
Confidence 33333333333333332 367899999999999999988775 4667777765432110
Q ss_pred HHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--h
Q 022316 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 257 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~ 257 (299)
...+..+.+|+++++|+.|.++ +
T Consensus 138 -------------------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~ 162 (218)
T d2i3da1 138 -------------------------------------------------------FSFLAPCPSSGLIINGDADKVAPEK 162 (218)
T ss_dssp -------------------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHH
T ss_pred -------------------------------------------------------hhhccccCCCceeeecccceecChH
Confidence 0012334679999999999997 5
Q ss_pred hhHHHhhhcc---ccCceEEEEcCchhhhH---hHHHHHHHHhhhh
Q 022316 258 EAVHMTSKID---RRYSALVEVWTRVYISL---LGFLVLLASFCES 297 (299)
Q Consensus 258 ~~~~~~~~~~---~~~~~~~~~~~~~H~~~---~~f~~~~~~~~~~ 297 (299)
...++.+.+. +...+++++|+++|.-. .++.+.+.+|+++
T Consensus 163 ~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~g~~~~l~~~v~~~l~~ 208 (218)
T d2i3da1 163 DVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDR 208 (218)
T ss_dssp HHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCccEEEeCCCCCCCcCCHHHHHHHHHHHHHH
Confidence 5555555542 23468899999999543 3455666677664
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.68 E-value=8.1e-16 Score=118.15 Aligned_cols=159 Identities=11% Similarity=0.045 Sum_probs=104.5
Q ss_pred eEEEEec-cCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHH
Q 022316 31 SLSVTIY-GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (299)
Q Consensus 31 ~l~~~~~-g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 109 (299)
.|+|-.. +++.-|.||++||++.+... +......+.+.||.|+++|++|++... .....++.+.+
T Consensus 40 ~ly~P~~~~~g~~P~Vv~~HG~~g~~~~------~~~~a~~lA~~Gy~V~~~d~~~~~~~~--------~~~~~d~~~~~ 105 (260)
T d1jfra_ 40 TIYYPTSTADGTFGAVVISPGFTAYQSS------IAWLGPRLASQGFVVFTIDTNTTLDQP--------DSRGRQLLSAL 105 (260)
T ss_dssp EEEEESCCTTCCEEEEEEECCTTCCGGG------TTTHHHHHHTTTCEEEEECCSSTTCCH--------HHHHHHHHHHH
T ss_pred EEEEcCCCCCCCccEEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEEeeCCCcCCc--------hhhHHHHHHHH
Confidence 4555332 22234789999999877644 123334555679999999999886441 12234444444
Q ss_pred HHHHHh------cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHH
Q 022316 110 AEVLNH------FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183 (299)
Q Consensus 110 ~~~l~~------l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (299)
..+.+. ++.+++.++|||+||..++.++...+ +++++|.+++....
T Consensus 106 ~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~--------------------------- 157 (260)
T d1jfra_ 106 DYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTD--------------------------- 157 (260)
T ss_dssp HHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSC---------------------------
T ss_pred HHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeeccccc---------------------------
Confidence 444432 23368999999999999999988876 57777776653210
Q ss_pred HHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--h-hhH
Q 022316 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S-EAV 260 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~-~~~ 260 (299)
..+.++++|+|+++|++|.++ + ..+
T Consensus 158 ----------------------------------------------------~~~~~~~~P~l~i~G~~D~~vp~~~~~~ 185 (260)
T d1jfra_ 158 ----------------------------------------------------KTWPELRTPTLVVGADGDTVAPVATHSK 185 (260)
T ss_dssp ----------------------------------------------------CCCTTCCSCEEEEEETTCSSSCTTTTHH
T ss_pred ----------------------------------------------------ccccccccceeEEecCCCCCCCHHHHHH
Confidence 012346789999999999997 2 344
Q ss_pred HHhhhcc-ccCceEEEEcCchhhh
Q 022316 261 HMTSKID-RRYSALVEVWTRVYIS 283 (299)
Q Consensus 261 ~~~~~~~-~~~~~~~~~~~~~H~~ 283 (299)
.+.+.++ +....++++++++|..
T Consensus 186 ~~~~~~~~~~~~~~~~i~ga~H~~ 209 (260)
T d1jfra_ 186 PFYESLPGSLDKAYLELRGASHFT 209 (260)
T ss_dssp HHHHHSCTTSCEEEEEETTCCTTG
T ss_pred HHHHhcccCCCEEEEEECCCccCC
Confidence 4555543 3346789999999953
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.57 E-value=4.8e-14 Score=107.83 Aligned_cols=188 Identities=11% Similarity=0.106 Sum_probs=111.0
Q ss_pred eEEEEeccCCCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHH
Q 022316 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (299)
Q Consensus 31 ~l~~~~~g~~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~ 110 (299)
++.+........|+||++||.+..... ... |......+...||.|+.+|+|..+... ....++|..+.+.
T Consensus 51 ~lDiy~P~~~~~P~vv~iHGG~w~~g~--~~~-~~~~a~~l~~~G~~Vv~~~YRl~p~~~-------~p~~~~d~~~a~~ 120 (261)
T d2pbla1 51 KFDLFLPEGTPVGLFVFVHGGYWMAFD--KSS-WSHLAVGALSKGWAVAMPSYELCPEVR-------ISEITQQISQAVT 120 (261)
T ss_dssp EEEEECCSSSCSEEEEEECCSTTTSCC--GGG-CGGGGHHHHHTTEEEEEECCCCTTTSC-------HHHHHHHHHHHHH
T ss_pred EEEEeccCCCCCCeEEEECCCCCccCC--hhH-hhhHHHHHhcCCceeeccccccccccc-------CchhHHHHHHHHH
Confidence 443333333457899999996543221 112 223334455679999999999764321 1133444444455
Q ss_pred HHHHhcCCCcEEEEeeCccHHHHHHHHHHc------cCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcchhHHHHH
Q 022316 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184 (299)
Q Consensus 111 ~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (299)
.+.+.. .+++.|+|||.||.++..++... ...+++++.+++.......... ..
T Consensus 121 ~~~~~~-~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~------- 179 (261)
T d2pbla1 121 AAAKEI-DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT-------------SM------- 179 (261)
T ss_dssp HHHHHS-CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS-------------TT-------
T ss_pred HHHhcc-cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhh-------------hh-------
Confidence 554544 37999999999999997766433 2357888888876654321110 00
Q ss_pred HHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch--hhhHHH
Q 022316 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 262 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~--~~~~~~ 262 (299)
...+.. +++... . .+......+.++|+++++|++|..+ +.++.+
T Consensus 180 --~~~~~~---------~~~~~~---~--------------------~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~ 225 (261)
T d2pbla1 180 --NEKFKM---------DADAAI---A--------------------ESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWL 225 (261)
T ss_dssp --HHHHCC---------CHHHHH---H--------------------TCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHH
T ss_pred --cccccC---------CHHHHH---H--------------------hCchhhcccCCCeEEEEEecCCCchHHHHHHHH
Confidence 000100 011110 0 0111223456789999999999876 677778
Q ss_pred hhhccccCceEEEEcCchhhhHhH
Q 022316 263 TSKIDRRYSALVEVWTRVYISLLG 286 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~H~~~~~ 286 (299)
.+.+. +..+++|+..|+-+++
T Consensus 226 ~~~l~---~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 226 VEAWD---ADHVIAFEKHHFNVIE 246 (261)
T ss_dssp HHHHT---CEEEEETTCCTTTTTG
T ss_pred HHHhC---CCceEeCCCCchhHHH
Confidence 77764 5678899999965554
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.56 E-value=2.7e-14 Score=114.49 Aligned_cols=128 Identities=11% Similarity=0.064 Sum_probs=88.5
Q ss_pred ceeecCCc-eEEEEeccC---CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC
Q 022316 23 NLIKTSHG-SLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (299)
Q Consensus 23 ~~i~~~~~-~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 98 (299)
..|+.++| +|...++-| ++-|+||+.||.+......... +......+..+||.|+++|.||+|.|..... .
T Consensus 8 v~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~--~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~---~ 82 (347)
T d1ju3a2 8 VMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWST--QSTNWLEFVRDGYAVVIQDTRGLFASEGEFV---P 82 (347)
T ss_dssp EEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHT--TSCCTHHHHHTTCEEEEEECTTSTTCCSCCC---T
T ss_pred eEEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCc--ccHHHHHHHHCCCEEEEEeeCCccccCCccc---c
Confidence 35666554 787666543 2347888999876532221111 1123345667899999999999999976432 2
Q ss_pred cccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 99 VLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
.....+-..|+.+++..... +++.++|+|+||.+++.+|...|..+++++...+...
T Consensus 83 ~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d 141 (347)
T d1ju3a2 83 HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141 (347)
T ss_dssp TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSC
T ss_pred ccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccch
Confidence 23334444566666666554 5899999999999999999999999999998887654
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.54 E-value=7.7e-14 Score=111.99 Aligned_cols=131 Identities=11% Similarity=0.087 Sum_probs=79.7
Q ss_pred cceeec-CCceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCC
Q 022316 22 DNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (299)
Q Consensus 22 ~~~i~~-~~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~ 96 (299)
++.+.. ++..|..+.+-+ +..|+||++||.|....+..... +......+...|+.|+.+|+|..+...+..+
T Consensus 81 ~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~-~~~~~~~la~~g~~VvsvdYRla~~~~pe~~-- 157 (358)
T d1jkma_ 81 TETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRV-HRRWCTDLAAAGSVVVMVDFRNAWTAEGHHP-- 157 (358)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHH-HHHHHHHHHHTTCEEEEEECCCSEETTEECC--
T ss_pred EEEEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccc-cchHHHHHHhhhheeeeeeecccccccccCC--
Confidence 344544 444676665532 23468999999865432222111 1123344456799999999998743322111
Q ss_pred CCcccHHHHHHHHHHHHH---hcCCCcEEEEeeCccHHHHHHHHHH-----ccCcccEEEEecCCCCC
Q 022316 97 EPVLSVDDLADQIAEVLN---HFGLGAVMCMGVTAGAYILTLFAMK-----YRHRVLGLILVSPLCKA 156 (299)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~---~l~~~~~~lvG~S~Gg~va~~~a~~-----~p~~v~~lvl~~~~~~~ 156 (299)
. ...++|..+.+..+.+ .++.+++.|+|+|.||.+++.++.. .+..+.++++..|....
T Consensus 158 ~-p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~ 224 (358)
T d1jkma_ 158 F-PSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 224 (358)
T ss_dssp T-THHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred C-chhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceecc
Confidence 1 1345555555554443 4567899999999999999877654 23457888888876654
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.52 E-value=2e-13 Score=107.47 Aligned_cols=229 Identities=15% Similarity=0.092 Sum_probs=124.8
Q ss_pred cceeecCCceEEEEeccC-CCCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCCCCCCc
Q 022316 22 DNLIKTSHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPV 99 (299)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~-~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~ 99 (299)
...+..+++.+.++.+.+ ++.|+||++||.|....+.. .++ ..+..++.. |+.|+.+|+|..-+. +. .
T Consensus 58 ~~~i~~~~g~i~~~iy~P~~~~P~il~iHGGg~~~g~~~--~~~-~~~~~l~~~~g~~Vv~v~Yrlap~~--~~-----p 127 (311)
T d1jjia_ 58 DRTIKGRNGDIRVRVYQQKPDSPVLVYYHGGGFVICSIE--SHD-ALCRRIARLSNSTVVSVDYRLAPEH--KF-----P 127 (311)
T ss_dssp EEEEEETTEEEEEEEEESSSSEEEEEEECCSTTTSCCTG--GGH-HHHHHHHHHHTSEEEEEECCCTTTS--CT-----T
T ss_pred EEEEeCCCCcEEEEEEcCCCCceEEEEEcCCCCccCChh--hhh-hhhhhhhhcCCcEEEEecccccccc--cc-----c
Confidence 456777788888877765 35688999999864332211 111 222344443 999999999976322 11 1
Q ss_pred ccHHHHHHHHHHHHH---hcCC--CcEEEEeeCccHHHHHHHHHHc----cCcccEEEEecCCCCCcchhHHHHhhhhhh
Q 022316 100 LSVDDLADQIAEVLN---HFGL--GAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (299)
Q Consensus 100 ~~~~~~~~~l~~~l~---~l~~--~~~~lvG~S~Gg~va~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (299)
..+++..+.+..+.+ .+++ +++.++|+|.||.+++.++... .....+.+++.|...............
T Consensus 128 ~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~--- 204 (311)
T d1jjia_ 128 AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFG--- 204 (311)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTS---
T ss_pred hhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCcccccccc---
Confidence 344554444443333 3344 5899999999999888776543 234677888888765432221110000
Q ss_pred hHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEec
Q 022316 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 250 (299)
...... .................... ... ........+...|+++++|
T Consensus 205 --~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~----~~~---~sp~~~~~~~~pP~li~~g 252 (311)
T d1jjia_ 205 --EGLWIL-----------------------DQKIMSWFSEQYFSREEDKF----NPL---ASVIFADLENLPPALIITA 252 (311)
T ss_dssp --SSCSSC-----------------------CHHHHHHHHHHHCSSGGGGG----CTT---TSGGGSCCTTCCCEEEEEE
T ss_pred --cccccc-----------------------cHHHhhhhhhhccccccccc----ccc---cchhhcccccCCCEEEEEc
Confidence 000000 01111111111100000000 000 0111111122468999999
Q ss_pred CCCcchhhhHHHhhhcc--ccCceEEEEcCchhhhH---------hHHHHHHHHhh
Q 022316 251 ESSPFHSEAVHMTSKID--RRYSALVEVWTRVYISL---------LGFLVLLASFC 295 (299)
Q Consensus 251 ~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~---------~~f~~~~~~~~ 295 (299)
+.|.+++++..+.+++. +..++++++++.+|.-. .++++.+++|+
T Consensus 253 ~~D~l~d~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 253 EYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp EECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 99988866677776663 44588999999999422 35677777776
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.51 E-value=1.8e-13 Score=102.13 Aligned_cols=177 Identities=11% Similarity=0.108 Sum_probs=104.4
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhccc---CceEEEEECCCCC--------CCCC---CCCCCCCCccc---HH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL---HNFCIYHINPPGH--------EFGA---AAISDDEPVLS---VD 103 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~---~~~~vi~~D~~G~--------G~S~---~~~~~~~~~~~---~~ 103 (299)
.+++||++||+|.+..+ |... .+.+. .+..+++++-|.. +... ........... ++
T Consensus 13 ~~~~Vi~lHG~G~~~~~------~~~~-~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 85 (218)
T d1auoa_ 13 ADACVIWLHGLGADRYD------FMPV-AEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELE 85 (218)
T ss_dssp CSEEEEEECCTTCCTTT------THHH-HHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHH
T ss_pred CCeEEEEEcCCCCChhh------HHHH-HHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHH
Confidence 45689999999988754 2122 22222 2566777665421 0000 00000011122 22
Q ss_pred HHHHHHHHHHH---hcC--CCcEEEEeeCccHHHHHHHHHH-ccCcccEEEEecCCCCCcchhHHHHhhhhhhhHHhhcc
Q 022316 104 DLADQIAEVLN---HFG--LGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (299)
Q Consensus 104 ~~~~~l~~~l~---~l~--~~~~~lvG~S~Gg~va~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
...+.+.++++ ..+ .++++++|+|+||++++.++.. .+..+.+++.+++.......
T Consensus 86 ~~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~------------------ 147 (218)
T d1auoa_ 86 VSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGD------------------ 147 (218)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCT------------------
T ss_pred HHHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccc------------------
Confidence 22333343433 333 3789999999999999998765 46678888888763211000
Q ss_pred hhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCCCcch-
Q 022316 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 256 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~- 256 (299)
.. . . .....+.|+++++|++|.++
T Consensus 148 ---------------~~--------~------------------------------~--~~~~~~~pvl~~hG~~D~vvp 172 (218)
T d1auoa_ 148 ---------------EL--------E------------------------------L--SASQQRIPALCLHGQYDDVVQ 172 (218)
T ss_dssp ---------------TC--------C------------------------------C--CHHHHTCCEEEEEETTCSSSC
T ss_pred ---------------cc--------c------------------------------c--chhccCCCEEEEecCCCCccC
Confidence 00 0 0 00112469999999999998
Q ss_pred -hhhHHHhhhcc--ccCceEEEEcCchhhhHhHHHHHHHHhhhhc
Q 022316 257 -SEAVHMTSKID--RRYSALVEVWTRVYISLLGFLVLLASFCESE 298 (299)
Q Consensus 257 -~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~f~~~~~~~~~~~ 298 (299)
+.+++..+.+. +..+++++++ .+|....+.++.+..|+.+.
T Consensus 173 ~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~~~~~~~i~~wl~~~ 216 (218)
T d1auoa_ 173 NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAAR 216 (218)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEC-CCCccCHHHHHHHHHHHHHh
Confidence 55666666553 2347889987 78988788888888888763
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.49 E-value=2.4e-13 Score=107.42 Aligned_cols=110 Identities=12% Similarity=0.083 Sum_probs=64.2
Q ss_pred cceeecCCc--eEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCC
Q 022316 22 DNLIKTSHG--SLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAIS 94 (299)
Q Consensus 22 ~~~i~~~~~--~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~ 94 (299)
+..+...+| .+..+.+-+ +..|+||++||.|....+.. . .......++.+ ||.|+.+|+|...+.. .+
T Consensus 52 ~~~~~~~~g~~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~--~-~~~~~~~la~~~G~~V~~vdYrl~pe~~--~~ 126 (317)
T d1lzla_ 52 ELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAE--S-SDPFCVEVARELGFAVANVEYRLAPETT--FP 126 (317)
T ss_dssp EEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGG--G-GHHHHHHHHHHHCCEEEEECCCCTTTSC--TT
T ss_pred EEEEecCCCCceEEEEEECCCCCCCCCcEEEEecCccccccccc--c-cchHHHhHHhhcCCcccccccccccccc--cc
Confidence 334444444 355444332 23468999999764321111 1 11333444444 9999999999875432 11
Q ss_pred CCCCcccHHHHHHHHHHH---HHhcCC--CcEEEEeeCccHHHHHHHHHHcc
Q 022316 95 DDEPVLSVDDLADQIAEV---LNHFGL--GAVMCMGVTAGAYILTLFAMKYR 141 (299)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~---l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p 141 (299)
..++|..+.+..+ .+.+++ +++.++|+|.||.+++.++.+.+
T Consensus 127 -----~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~ 173 (317)
T d1lzla_ 127 -----GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKAR 173 (317)
T ss_dssp -----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHH
T ss_pred -----ccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhh
Confidence 3344444443333 334444 68999999999999998887643
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.48 E-value=8.7e-13 Score=99.32 Aligned_cols=175 Identities=10% Similarity=0.032 Sum_probs=102.2
Q ss_pred eeecC-CceEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCCCCCCCCCCCCCCC--
Q 022316 24 LIKTS-HGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP-- 98 (299)
Q Consensus 24 ~i~~~-~~~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~-- 98 (299)
.++.. +..+.....-| .+.|.||++|+..+.... . ......+...||.|+++|+.|.+...........
T Consensus 7 ~~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~----~--~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~ 80 (233)
T d1dina_ 7 SIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAF----M--RETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQ 80 (233)
T ss_dssp CEECTTSCEECEEEECCSSSSEEEEEEECCTTBSCHH----H--HHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHH
T ss_pred EEEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCCHH----H--HHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHH
Confidence 34544 44675555433 356789999955432211 0 1222344567999999999776544322111100
Q ss_pred ---------cccHHHHHHHHHHHHHhc---CC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH
Q 022316 99 ---------VLSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (299)
Q Consensus 99 ---------~~~~~~~~~~l~~~l~~l---~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (299)
..+.+....|+...++.+ +. +++.++|+|+||.+++.++.+. .+.+.+..-+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~~--------- 149 (233)
T d1dina_ 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVGL--------- 149 (233)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSCG---------
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceecccccccc---------
Confidence 123344455666555544 22 4799999999999999888653 2444443221000
Q ss_pred hhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccccc
Q 022316 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 244 (299)
....+...++++|
T Consensus 150 -------------------------------------------------------------------~~~~~~~~~i~~P 162 (233)
T d1dina_ 150 -------------------------------------------------------------------EKQLNKVPEVKHP 162 (233)
T ss_dssp -------------------------------------------------------------------GGGGGGGGGCCSC
T ss_pred -------------------------------------------------------------------ccchhhhhccCCc
Confidence 0001123467899
Q ss_pred EEEEecCCCcch--hhhHHHhhhc-cccCceEEEEcCchhh
Q 022316 245 SLIFVGESSPFH--SEAVHMTSKI-DRRYSALVEVWTRVYI 282 (299)
Q Consensus 245 ~lii~G~~D~~~--~~~~~~~~~~-~~~~~~~~~~~~~~H~ 282 (299)
+|+++|++|..+ +....+.+.+ .+...+++++|+++|.
T Consensus 163 vl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~Hg 203 (233)
T d1dina_ 163 ALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHS 203 (233)
T ss_dssp EEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTT
T ss_pred ceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcC
Confidence 999999999997 4444444433 2334789999999995
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.43 E-value=1.3e-12 Score=99.86 Aligned_cols=182 Identities=10% Similarity=-0.003 Sum_probs=103.0
Q ss_pred CceEEEEeccC------CCCCeEEEecccccchhhhccccccCchhhh-ccc----CceEEEEECCCCCCCCCCCCCCCC
Q 022316 29 HGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACS-LLL----HNFCIYHINPPGHEFGAAAISDDE 97 (299)
Q Consensus 29 ~~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~-~l~----~~~~vi~~D~~G~G~S~~~~~~~~ 97 (299)
+..+.|.++-| ++-|+|+++||.+.+................ ... ..+.+...+... .... ....
T Consensus 33 g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~ 108 (255)
T d1jjfa_ 33 NSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNA---AGPG-IADG 108 (255)
T ss_dssp TEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCC---CCTT-CSCH
T ss_pred CCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeeccccc---cccc-cccc
Confidence 45677777643 1347899999988766542221111011011 111 123333333222 2111 1111
Q ss_pred CcccHHHHHHHHHHHHHhc-----CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHHhhhhhhhH
Q 022316 98 PVLSVDDLADQIAEVLNHF-----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (299)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l-----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
.....+.+.+++...++.. ..+++.++|+|+||..++.+|.++|+++++++.+++.........
T Consensus 109 ~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~~----------- 177 (255)
T d1jjfa_ 109 YENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNER----------- 177 (255)
T ss_dssp HHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHHH-----------
T ss_pred ccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCccccc-----------
Confidence 1122344455555544432 235799999999999999999999999999999887553221100
Q ss_pred HhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEEEEecCC
Q 022316 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 252 (299)
.+ .+..........|+++.+|++
T Consensus 178 ----------------~~-----------------------------------------~~~~~~~~~~~~~~~i~~G~~ 200 (255)
T d1jjfa_ 178 ----------------LF-----------------------------------------PDGGKAAREKLKLLFIACGTN 200 (255)
T ss_dssp ----------------HC-----------------------------------------TTTTHHHHHHCSEEEEEEETT
T ss_pred ----------------cc-----------------------------------------ccHHHHhhccCCcceEEeCCC
Confidence 00 000011123346899999999
Q ss_pred CcchhhhHHHhhhcc--ccCceEEEEcCchhh
Q 022316 253 SPFHSEAVHMTSKID--RRYSALVEVWTRVYI 282 (299)
Q Consensus 253 D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~ 282 (299)
|..++..+++.+.+. +-.+++.++++.+|.
T Consensus 201 D~~~~~~~~~~~~L~~~g~~~~~~~~~~ggH~ 232 (255)
T d1jjfa_ 201 DSLIGFGQRVHEYCVANNINHVYWLIQGGGHD 232 (255)
T ss_dssp CTTHHHHHHHHHHHHHTTCCCEEEEETTCCSS
T ss_pred CCCchHHHHHHHHHHHCCCCEEEEEECCCCcC
Confidence 999866666666652 334789999999996
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.33 E-value=1e-10 Score=94.33 Aligned_cols=134 Identities=13% Similarity=0.098 Sum_probs=85.2
Q ss_pred cceeecCCc-eEEEEec---cCCCCCeEEEecccccchhhhccccc-----cCchhhhcccCceEEEEECCCCCCCCCCC
Q 022316 22 DNLIKTSHG-SLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLF-----FCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (299)
Q Consensus 22 ~~~i~~~~~-~l~~~~~---g~~~~p~lvl~HG~~~~~~~~~~~~~-----w~~~~~~~l~~~~~vi~~D~~G~G~S~~~ 92 (299)
+..|+.++| +|...++ +.++-|+||+.|+.+.++........ .......+..+||.|+.+|.||+|.|...
T Consensus 26 ~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~ 105 (381)
T d1mpxa2 26 EVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGD 105 (381)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCCc
Confidence 456666555 7765554 33345788888887654332211110 01122335577999999999999999753
Q ss_pred CCCCC---------CcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 93 ISDDE---------PVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 93 ~~~~~---------~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
..... ......|..+.+.-+.++..+ ++|.++|+|+||..++.+|...|..++++|..++...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 106 YVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred eeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 22100 011234444444333344333 5899999999999999999999999999999887654
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.33 E-value=2.1e-11 Score=95.71 Aligned_cols=235 Identities=12% Similarity=0.031 Sum_probs=121.5
Q ss_pred CcceeecCCceEEEEeccC----CCCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCCC
Q 022316 21 KDNLIKTSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISD 95 (299)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~ 95 (299)
+...++.+++.|..+.+-+ ++.|+||++||.+....+. .. +......++.+ ++.|+.+|+|......
T Consensus 47 ~~~~~~~~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~--~~-~~~~~~~~a~~~~~~v~~v~Yrl~p~~~----- 118 (308)
T d1u4na_ 47 REFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDL--ET-HDPVCRVLAKDGRAVVFSVDYRLAPEHK----- 118 (308)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCT--TT-THHHHHHHHHHHTSEEEEECCCCTTTSC-----
T ss_pred EEEEEecCCceEEEEEEeccccCCCCCEEEEEecCeeeeecc--cc-ccchhhhhhhcccccccccccccccccc-----
Confidence 3455666777777665543 2346899999976432221 11 11232334444 5678899998664321
Q ss_pred CCCcccHHHHHHHHHHHHHhc---CC--CcEEEEeeCccHHHHHHHHHHccC----cccEEEEecCCCCCcchhHHHHhh
Q 022316 96 DEPVLSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLYNK 166 (299)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l---~~--~~~~lvG~S~Gg~va~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~ 166 (299)
.....+|..+.+..+.+.. ++ +++.++|+|.||.+++.++....+ .+.+..++.+..............
T Consensus 119 --~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (308)
T d1u4na_ 119 --FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIE 196 (308)
T ss_dssp --TTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCHHHH
T ss_pred --cccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccccccchhh
Confidence 1234555555555554332 22 579999999999999888775543 356666777655432111100000
Q ss_pred hhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhccccccEE
Q 022316 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246 (299)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 246 (299)
... ....... ................... .... ....... .-..|++
T Consensus 197 ~~~---~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~-----~~~s-~~~~~d~-~~~Pp~l 243 (308)
T d1u4na_ 197 ENA---EGYLLTG-----------------------GMSLWFLDQYLNSLEELTH-----PWFS-PVLYPDL-SGLPPAY 243 (308)
T ss_dssp HTS---SSSSSCH-----------------------HHHHHHHHHHCSSGGGGGC-----TTTC-GGGCSCC-TTCCCEE
T ss_pred hcc---ccccccc-----------------------hhhhhhhhcccCccccccc-----hhhh-hhhchhh-cCCCCee
Confidence 000 0000000 0000000000000000000 0000 0000001 1124899
Q ss_pred EEecCCCcchhhhHHHhhhcc--ccCceEEEEcCchhhhH---------hHHHHHHHHhhhhc
Q 022316 247 IFVGESSPFHSEAVHMTSKID--RRYSALVEVWTRVYISL---------LGFLVLLASFCESE 298 (299)
Q Consensus 247 ii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~---------~~f~~~~~~~~~~~ 298 (299)
+++|+.|..++.+..+.+++. +..++++++|+.+|.-. .+.++.++.|+++.
T Consensus 244 i~~g~~D~l~~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~ 306 (308)
T d1u4na_ 244 IATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 306 (308)
T ss_dssp EEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHH
T ss_pred EEecCcCCchHHHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 999999988877777777663 34589999999999532 24667777787653
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.30 E-value=4.8e-12 Score=103.01 Aligned_cols=81 Identities=10% Similarity=0.012 Sum_probs=61.9
Q ss_pred hcccCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCC--------------------CcEEEEeeCcc
Q 022316 70 SLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL--------------------GAVMCMGVTAG 129 (299)
Q Consensus 70 ~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l~~--------------------~~~~lvG~S~G 129 (299)
.+..+||.|+.+|.||+|.|..... ..+.++ ++|..++++-+.. ++|.++|+|+|
T Consensus 131 ~~~~~GYavv~~D~RG~g~S~G~~~----~~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~ 205 (405)
T d1lnsa3 131 YFLTRGFASIYVAGVGTRSSDGFQT----SGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYL 205 (405)
T ss_dssp HHHTTTCEEEEECCTTSTTSCSCCC----TTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHH
T ss_pred HHHhCCCEEEEECCCCCCCCCCccc----cCChhh-hhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHH
Confidence 3567799999999999999975432 233333 4565555554431 37999999999
Q ss_pred HHHHHHHHHHccCcccEEEEecCCCC
Q 022316 130 AYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 130 g~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
|..++.+|...|..++++|..++...
T Consensus 206 G~~q~~aA~~~pp~LkAivp~~~~~d 231 (405)
T d1lnsa3 206 GTMAYGAATTGVEGLELILAEAGISS 231 (405)
T ss_dssp HHHHHHHHTTTCTTEEEEEEESCCSB
T ss_pred HHHHHHHHhcCCccceEEEecCcccc
Confidence 99999999999999999998887654
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.29 E-value=2.3e-10 Score=87.63 Aligned_cols=120 Identities=12% Similarity=0.042 Sum_probs=77.0
Q ss_pred eEEEEeccCCCCCeEEEecccccc--hhhhccccccCchhhhcccCceEEEEECCCCCC-CCCCCCCCCCCcccHHH-HH
Q 022316 31 SLSVTIYGDQDKPALVTYPDLALN--YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE-FGAAAISDDEPVLSVDD-LA 106 (299)
Q Consensus 31 ~l~~~~~g~~~~p~lvl~HG~~~~--~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G~G-~S~~~~~~~~~~~~~~~-~~ 106 (299)
.+.+.+.+ +..|+|.|+||.++. ..+... . ..........++.|+.+|--..+ .+..+. .....+++ +.
T Consensus 17 ~~~~~v~~-~~~pvlylLhG~~g~~~~~~w~~-~--~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~---~~~~~~~tfl~ 89 (267)
T d1r88a_ 17 DIPVAFLA-GGPHAVYLLDAFNAGPDVSNWVT-A--GNAMNTLAGKGISVVAPAGGAYSMYTNWEQ---DGSKQWDTFLS 89 (267)
T ss_dssp EEEEEEEC-CSSSEEEEECCSSCCSSSCHHHH-T--SCHHHHHTTSSSEEEEECCCTTSTTSBCSS---CTTCBHHHHHH
T ss_pred eeeEEEEC-CCCCEEEEcCCCCCCCCcchhhh-c--cHHHHHHhhCCeEEEEECCCCCcCCccccc---cccccHHHHHH
Confidence 57666665 356899999997542 211100 1 01222333458999999842221 121111 12234544 45
Q ss_pred HHHHHHHHh-cC--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 107 DQIAEVLNH-FG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 107 ~~l~~~l~~-l~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
++|...++. .+ .++..+.|+||||..|+.+|.++|+++++++.+++.....
T Consensus 90 ~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~ 143 (267)
T d1r88a_ 90 AELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPS 143 (267)
T ss_dssp THHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTT
T ss_pred HHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCC
Confidence 577776654 33 3689999999999999999999999999999999876654
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.24 E-value=1e-11 Score=94.05 Aligned_cols=106 Identities=12% Similarity=0.109 Sum_probs=72.2
Q ss_pred eEEEecccccchhhhccccccCchhhhccc---CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhc--CC
Q 022316 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLL---HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF--GL 118 (299)
Q Consensus 44 ~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~---~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~l--~~ 118 (299)
||||+||++.++.... . | ..+...+. .|+.|+++++.....++... .-...+.++++.+.+.++.. +.
T Consensus 7 PVVLvHGlg~s~~~~~--~-m-~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~---~~~~~~~~~~e~v~~~I~~~~~~~ 79 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPL--S-M-GAIKKMVEKKIPGIHVLSLEIGKTLREDVEN---SFFLNVNSQVTTVCQILAKDPKLQ 79 (279)
T ss_dssp CEEEECCTTCCSCCTT--T-T-HHHHHHHHHHSTTCCEEECCCSSSHHHHHHH---HHHSCHHHHHHHHHHHHHSCGGGT
T ss_pred cEEEECCCCCCCCChH--H-H-HHHHHHHHHHCCCeEEEEEEcCCCccccccc---chhhhHHHHHHHHHHHHHhccccc
Confidence 8999999987643210 1 2 22233332 48999999986543221100 01235677778777777654 23
Q ss_pred CcEEEEeeCccHHHHHHHHHHccC-cccEEEEecCCCCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKA 156 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~ 156 (299)
+++++|||||||.++-.++.+.+. .|..+|.++++...
T Consensus 80 ~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~G 118 (279)
T d1ei9a_ 80 QGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQG 118 (279)
T ss_dssp TCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTTC
T ss_pred cceeEEEEccccHHHHHHHHHcCCCCcceEEEECCCCCC
Confidence 689999999999999999998875 59999999987644
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.14 E-value=4.1e-09 Score=81.50 Aligned_cols=125 Identities=12% Similarity=0.022 Sum_probs=78.1
Q ss_pred CceEEEEec-cCCCCCeEEEecccccchhhhccccccC--chhhhcc-cCceEEEEECCCCCCCCCCCCCC-----CCCc
Q 022316 29 HGSLSVTIY-GDQDKPALVTYPDLALNYMSCFQGLFFC--PEACSLL-LHNFCIYHINPPGHEFGAAAISD-----DEPV 99 (299)
Q Consensus 29 ~~~l~~~~~-g~~~~p~lvl~HG~~~~~~~~~~~~~w~--~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~-----~~~~ 99 (299)
+.++.+.+. +.+..|+|+++||.+.+.... . |. ..+.+.+ ..++.++.++..+.+.......+ ....
T Consensus 20 ~r~~~~~v~~p~~~~Pvl~llhG~~~~~d~~---~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (288)
T d1sfra_ 20 GRDIKVQFQSGGANSPALYLLDGLRAQDDFS---G-WDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQT 95 (288)
T ss_dssp TEEEEEEEECCSTTBCEEEEECCTTCCSSSC---H-HHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEEC
T ss_pred CcEEEEEEeCCCCCceEEEEcCCCCCCCcch---h-hhhhccHHHHHHhCCCEEEEeccCCCCCCccccCcccccccccc
Confidence 345655554 445678999999976532110 0 11 1123333 45899999998776533221110 0001
Q ss_pred ccHH-HHHHHHHHHHHh-cC--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 100 LSVD-DLADQIAEVLNH-FG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 100 ~~~~-~~~~~l~~~l~~-l~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
...+ .+++++...++. .+ .+++.++|+||||..|+.+|.++|+++++++.+++.....
T Consensus 96 ~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~~ 157 (288)
T d1sfra_ 96 YKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (288)
T ss_dssp CBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred hhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccccc
Confidence 2223 345566555533 33 3679999999999999999999999999999999876543
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.13 E-value=1.8e-09 Score=82.93 Aligned_cols=130 Identities=8% Similarity=-0.075 Sum_probs=69.8
Q ss_pred ceeecCC-ceEEEEeccC------CCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCC
Q 022316 23 NLIKTSH-GSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAIS 94 (299)
Q Consensus 23 ~~i~~~~-~~l~~~~~g~------~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~ 94 (299)
...++.+ .+|+...+-+ ++.|+||++||.+........ .......+. .++-+...+.++.........
T Consensus 10 v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (280)
T d1qfma2 10 IFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNY----SVSRLIFVRHMGGVLAVANIRGGGEYGETWH 85 (280)
T ss_dssp EEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCC----CHHHHHHHHHHCCEEEEECCTTSSTTHHHHH
T ss_pred EEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCc----chhhhhhhcccceeeeccccccccccchhhh
Confidence 3445544 4676655432 245899999996544333111 111122233 366666677666543211000
Q ss_pred CCCCcccHH----HHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 95 DDEPVLSVD----DLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 95 ~~~~~~~~~----~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
......... +.............. ....++|.|.||..+...+...++.+++++...+....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (280)
T d1qfma2 86 KGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDM 153 (280)
T ss_dssp HTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCT
T ss_pred hcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccch
Confidence 001111111 122222222222222 56889999999999999999999988888887776543
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.12 E-value=5.8e-10 Score=84.31 Aligned_cols=194 Identities=11% Similarity=0.039 Sum_probs=107.1
Q ss_pred CcceeecC--CceEEEEeccC-----CCCCeEEEecccccchhhhccccccCchhhhcccCc----eEEEEECCCCCCCC
Q 022316 21 KDNLIKTS--HGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN----FCIYHINPPGHEFG 89 (299)
Q Consensus 21 ~~~~i~~~--~~~l~~~~~g~-----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~----~~vi~~D~~G~G~S 89 (299)
++..+... ++++.+.++-+ +.-|+||++||.+..... .++ ..+..+...+ +-++.++....+.-
T Consensus 16 ~~~~~~S~~lg~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~~~----~~~-~~l~~l~~~~~~~~~i~v~~~~~~~~~~ 90 (246)
T d3c8da2 16 KEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSM----PVW-PVLTSLTHRQQLPPAVYVLIDAIDTTHR 90 (246)
T ss_dssp EEEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTS----CCH-HHHHHHHHTTSSCSCEEEEECCCSHHHH
T ss_pred EEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEeCCcchhccC----cHH-HHHHHHHHhCCCCceEEeeccccccccc
Confidence 33344443 55666666432 345889999985432211 112 2233333343 33444543222110
Q ss_pred CCCCCCCCCcccHHHHHHHHHHHHHhc---CC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCcchhHHHH
Q 022316 90 AAAISDDEPVLSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (299)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~l~~l---~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (299)
... ........+.+.+++..+++.. .. +++.++|+||||..++.++.++|+++.+++.+++.........
T Consensus 91 ~~~--~~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~~--- 165 (246)
T d3c8da2 91 AHE--LPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGG--- 165 (246)
T ss_dssp HHH--SSSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTS---
T ss_pred ccc--cCccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCCc---
Confidence 000 0011112334455666655542 22 5789999999999999999999999999999998553211000
Q ss_pred hhhhhhhHHhhcchhHHHHHHHHhhhccccccCCCCCchHHHHHHHHhhhcccccchHHHHHhhcCCCChhhhhcccccc
Q 022316 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 244 (299)
. .+....... ......+...|
T Consensus 166 ----------------------------~--------~~~~~~~~~-----------------------~~~~~~~~~~~ 186 (246)
T d3c8da2 166 ----------------------------Q--------QEGVLLEKL-----------------------KAGEVSAEGLR 186 (246)
T ss_dssp ----------------------------S--------SCCHHHHHH-----------------------HTTSSCCCSCE
T ss_pred ----------------------------c--------chHHHHHHh-----------------------hhhhhhccCCC
Confidence 0 000000000 00112345679
Q ss_pred EEEEecCCCcch-hhhHHHhhhcc--ccCceEEEEcCchhhhH
Q 022316 245 SLIFVGESSPFH-SEAVHMTSKID--RRYSALVEVWTRVYISL 284 (299)
Q Consensus 245 ~lii~G~~D~~~-~~~~~~~~~~~--~~~~~~~~~~~~~H~~~ 284 (299)
+++.+|+.|..+ ..++++.+++. +..+.++++|+ ||...
T Consensus 187 ~~l~~G~~D~~~~~~~~~l~~~L~~~g~~~~~~~~~G-gH~~~ 228 (246)
T d3c8da2 187 IVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDG-GHDAL 228 (246)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHTGGGTTSEEEEEESC-CSCHH
T ss_pred eEEEecCCCcchhHHHHHHHHHHHHCCCCEEEEEeCC-CCChH
Confidence 999999999876 66777777663 33478889997 79643
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.08 E-value=1.7e-11 Score=95.22 Aligned_cols=108 Identities=11% Similarity=0.070 Sum_probs=69.8
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHH----H
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL----N 114 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l----~ 114 (299)
+++|+++++||+..++.. .++......+|.. ++.||++|+... +..... ..........+.+..++ +
T Consensus 68 ~~~pt~iiiHGw~~~~~~----~~~~~~~~a~l~~~d~NVI~VDW~~~--a~~~Y~--~a~~n~~~Vg~~ia~~i~~l~~ 139 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEE----NWLLDMCKNMFKVEEVNCICVDWKKG--SQTSYT--QAANNVRVVGAQVAQMLSMLSA 139 (337)
T ss_dssp TTSEEEEEECCCCCTTCT----THHHHHHHHHTTTCCEEEEEEECHHH--HSSCHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcCCCCc----chHHHHHHHHHhcCCceEEEEeeccc--cCcchH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999999887644 2222233344444 799999999653 211000 01123333444444444 4
Q ss_pred hcC--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 115 HFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 115 ~l~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
..+ .++++|||||+||.||- +|.++..+|.+++.++|+.+.
T Consensus 140 ~~g~~~~~vhlIGhSLGAhvAG-~aG~~~~~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 140 NYSYSPSQVQLIGHSLGAHVAG-EAGSRTPGLGRITGLDPVEAS 182 (337)
T ss_dssp HHCCCGGGEEEEEETHHHHHHH-HHHHTSTTCCEEEEESCCCTT
T ss_pred hcCCChhheEEEeecHHHhhhH-HHHHhhccccceeccCCCccc
Confidence 444 47999999999999997 555566789999999998764
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.04 E-value=6.9e-11 Score=91.52 Aligned_cols=109 Identities=9% Similarity=0.053 Sum_probs=74.2
Q ss_pred CCCCeEEEecccccchhhhccccccCchhhhccc-CceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHH----
Q 022316 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN---- 114 (299)
Q Consensus 40 ~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~---- 114 (299)
+++|+++++||+..++.. .++......++. .++.||++|+... +..... ..........+.+..+++
T Consensus 68 ~~~pt~iiiHG~~~~~~~----~~~~~~~~a~l~~~d~NVi~VDW~~~--a~~~Y~--~a~~n~~~Vg~~ia~~i~~l~~ 139 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGED----GWLLDMCKKMFQVEKVNCICVDWRRG--SRTEYT--QASYNTRVVGAEIAFLVQVLST 139 (338)
T ss_dssp TTSEEEEEECCSCCTTCT----THHHHHHHHHHTTCCEEEEEEECHHH--HSSCHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCcccCCCCc----ccHHHHHHHHHhcCCceEEEEechhh--cccchH--HHHHhHHHHHHHHHHHHHHHHH
Confidence 357899999999877644 223233334444 4799999999764 211100 112334445555555543
Q ss_pred hcC--CCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 115 HFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 115 ~l~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
..+ .++++|||||+||.||-..+.+.+.+|.+++.++|+.+.
T Consensus 140 ~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 140 EMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp HHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred hcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 323 489999999999999999998888899999999998755
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.04 E-value=7.4e-10 Score=89.35 Aligned_cols=133 Identities=11% Similarity=0.034 Sum_probs=84.1
Q ss_pred ceeecCCc-eEEEEeccC---CCCCeEEEecccccchhhhccc------cccCchhhhcccCceEEEEECCCCCCCCCCC
Q 022316 23 NLIKTSHG-SLSVTIYGD---QDKPALVTYPDLALNYMSCFQG------LFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (299)
Q Consensus 23 ~~i~~~~~-~l~~~~~g~---~~~p~lvl~HG~~~~~~~~~~~------~~w~~~~~~~l~~~~~vi~~D~~G~G~S~~~ 92 (299)
..|+.++| +|...++-+ ++-|+||+.|+.+..+...... .........+..+||.|+.+|.||+|.|...
T Consensus 31 v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~ 110 (385)
T d2b9va2 31 VMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGD 110 (385)
T ss_dssp EEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCCc
Confidence 34677654 787666533 3456777777765432211100 0011222345578999999999999999764
Q ss_pred CCCCC---------CcccHHHHHHHHHHHHHhcCC--CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCC
Q 022316 93 ISDDE---------PVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (299)
Q Consensus 93 ~~~~~---------~~~~~~~~~~~l~~~l~~l~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 155 (299)
..... .....+|..+.|+-+.++... ++|.++|+|+||..++.+|...|+.+++++..++...
T Consensus 111 ~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 111 YVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred eeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 32111 112345555544444444333 6899999999999999999999989999988776544
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.95 E-value=1.5e-08 Score=77.80 Aligned_cols=121 Identities=11% Similarity=0.063 Sum_probs=77.5
Q ss_pred ceEEEEeccCCCCCeEEEecccccc--hhhhccccccCc--hhhh-cccCceEEEEECCCCCCC-CCCCCC----CCCCc
Q 022316 30 GSLSVTIYGDQDKPALVTYPDLALN--YMSCFQGLFFCP--EACS-LLLHNFCIYHINPPGHEF-GAAAIS----DDEPV 99 (299)
Q Consensus 30 ~~l~~~~~g~~~~p~lvl~HG~~~~--~~~~~~~~~w~~--~~~~-~l~~~~~vi~~D~~G~G~-S~~~~~----~~~~~ 99 (299)
.+|.+...+ ++.|+|+|+||.+.. ... |.. .+.+ +...++.|+.+|-...+. +....+ .....
T Consensus 18 r~i~~~~~~-~~~p~lyllhG~~g~~d~~~------W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~ 90 (280)
T d1dqza_ 18 RDIKVQFQG-GGPHAVYLLDGLRAQDDYNG------WDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYT 90 (280)
T ss_dssp EEEEEEEEC-CSSSEEEECCCTTCCSSSCH------HHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSC
T ss_pred CcceEEeeC-CCCCEEEECCCCCCCCccch------hhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcc
Confidence 456666655 467899999997642 222 211 1223 334589999999533221 111000 11122
Q ss_pred ccHHH-HHHHHHHHHHhc---CCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCCc
Q 022316 100 LSVDD-LADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 100 ~~~~~-~~~~l~~~l~~l---~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 157 (299)
..+++ ++++|...++.. +.++..++|+||||..|+.+|.++|+++++++.+++.....
T Consensus 91 ~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~~ 152 (280)
T d1dqza_ 91 YKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPS 152 (280)
T ss_dssp CBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTT
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCcc
Confidence 34444 456777766542 44678999999999999999999999999999999876543
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.85 E-value=3e-07 Score=69.99 Aligned_cols=125 Identities=10% Similarity=-0.040 Sum_probs=73.1
Q ss_pred eeecCCceEEEEeccCC------CCCeEEEecccccchhhhcccc--c---cCchhhhcccCceEEEEECCCCCCCCCCC
Q 022316 24 LIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGL--F---FCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (299)
Q Consensus 24 ~i~~~~~~l~~~~~g~~------~~p~lvl~HG~~~~~~~~~~~~--~---w~~~~~~~l~~~~~vi~~D~~G~G~S~~~ 92 (299)
.++..+++..+.++=|+ +-|+|+++||.+.+........ . ............+.|+.++..+.+...
T Consensus 31 ~~~~~~~~r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-- 108 (273)
T d1wb4a1 31 TYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTA-- 108 (273)
T ss_dssp EEEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCT--
T ss_pred EEecCCCeEEEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCcc--
Confidence 34445555555555432 2378899999876654321100 0 001111222346888888877653221
Q ss_pred CCCCCCcccHHHHHHHHHHHHHh---------------cCCCcEEEEeeCccHHHHHHHHHHccCcccEEEEecCCCCC
Q 022316 93 ISDDEPVLSVDDLADQIAEVLNH---------------FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (299)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~---------------l~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 156 (299)
. .........+....+. ..-+++.+.|+||||..++.+|.++|+++.+++.+++....
T Consensus 109 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~~ 181 (273)
T d1wb4a1 109 -----Q-NFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWY 181 (273)
T ss_dssp -----T-THHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCB
T ss_pred -----c-cchhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccccc
Confidence 1 1122222222222211 13367999999999999999999999999999999986543
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.82 E-value=1.7e-09 Score=85.73 Aligned_cols=108 Identities=12% Similarity=0.050 Sum_probs=73.0
Q ss_pred CCCeEEEecccccchh-hhccccccCc---hhhhcc-cCceEEEEECCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHh
Q 022316 41 DKPALVTYPDLALNYM-SCFQGLFFCP---EACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~-~~~~~~~w~~---~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (299)
++-||||+||+.+=+. ....-.||.- .+.+.| .+|++|++...+.. .+.++=+++|...|+.
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~-------------~S~~~RA~eL~~~I~~ 72 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL-------------SSNWDRACEAYAQLVG 72 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSS-------------BCHHHHHHHHHHHHHC
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCc-------------cCHHHHHHHHHHHHhh
Confidence 3457999999744211 1111234642 245555 56999999998655 3556666666666653
Q ss_pred c----CC-------------------------CcEEEEeeCccHHHHHHHHHHccC------------------------
Q 022316 116 F----GL-------------------------GAVMCMGVTAGAYILTLFAMKYRH------------------------ 142 (299)
Q Consensus 116 l----~~-------------------------~~~~lvG~S~Gg~va~~~a~~~p~------------------------ 142 (299)
. |. +|++||||||||..+-.++...|+
T Consensus 73 ~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (388)
T d1ku0a_ 73 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGH 152 (388)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCC
Confidence 2 21 489999999999999888775543
Q ss_pred -cccEEEEecCCCCCcchhH
Q 022316 143 -RVLGLILVSPLCKAPSWTE 161 (299)
Q Consensus 143 -~v~~lvl~~~~~~~~~~~~ 161 (299)
.|++++.|+++........
T Consensus 153 ~~V~SvTTIsTPH~GS~~AD 172 (388)
T d1ku0a_ 153 RFVLSVTTIATPHDGTTLVN 172 (388)
T ss_dssp CCEEEEEEESCCTTCCGGGG
T ss_pred cceEEEEeccCCCCCcchhh
Confidence 6999999999887755443
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.50 E-value=1.6e-07 Score=72.64 Aligned_cols=35 Identities=17% Similarity=0.338 Sum_probs=29.6
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCccc-EEEEecCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVL-GLILVSPL 153 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~-~lvl~~~~ 153 (299)
+++.|.|+|+||.+|+.++..+|+.++ ++.++++.
T Consensus 11 ~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~ 46 (318)
T d2d81a1 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGG 46 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCC
T ss_pred cceEEEEECHHHHHHHHHHHhcccceeeeEEEeccC
Confidence 579999999999999999999999996 45555543
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.49 E-value=4.6e-06 Score=63.94 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=64.9
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCCC----------------CCCCCCCCC---CCCccc
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGH----------------EFGAAAISD---DEPVLS 101 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G~----------------G~S~~~~~~---~~~~~~ 101 (299)
-|+|.++||.+.+........ .+.+.+ ..+..|+.++.... +.+-..... ......
T Consensus 49 yPVLYlLhG~~~~~~~w~~~~----~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~ 124 (299)
T d1pv1a_ 49 IPTVFYLSGLTCTPDNASEKA----FWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQ 124 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHS----CHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCB
T ss_pred CCEEEEcCCCCCCHHHHHHhh----hHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccc
Confidence 479999999988765521111 112222 23777888774322 111000000 001123
Q ss_pred HHH-HHHHHHHHHHh-cCC---------CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCCC
Q 022316 102 VDD-LADQIAEVLNH-FGL---------GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKA 156 (299)
Q Consensus 102 ~~~-~~~~l~~~l~~-l~~---------~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~~ 156 (299)
+++ +.+++...++. +.. ++..|.|+||||.-|+.+|.+ +|++..++..+++....
T Consensus 125 ~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~~ 192 (299)
T d1pv1a_ 125 MYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNP 192 (299)
T ss_dssp HHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCCS
T ss_pred hHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcCCc
Confidence 333 44566555543 222 468999999999999999986 58899998888876543
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.24 E-value=5.5e-06 Score=62.53 Aligned_cols=34 Identities=12% Similarity=-0.051 Sum_probs=26.9
Q ss_pred CcEEEEeeCccHHHHHHHHHHccCcccEEEEecCC
Q 022316 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (299)
Q Consensus 119 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 153 (299)
++..++|+|+||..++..+. +++.+.+++.+++.
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~-~~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWL-SSSYFRSYYSASPS 174 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHH-HCSSCSEEEEESGG
T ss_pred CceEEEeccHHHHHHHHHHH-cCcccCEEEEECCc
Confidence 46789999999999997655 56678888877653
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.24 E-value=0.00048 Score=55.92 Aligned_cols=132 Identities=12% Similarity=0.012 Sum_probs=81.1
Q ss_pred ceeecCCc-eEEEEeccC----CCCCeEEEecccccchhhhccccccCchhh-----------hcccCceEEEEECCC-C
Q 022316 23 NLIKTSHG-SLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEAC-----------SLLLHNFCIYHINPP-G 85 (299)
Q Consensus 23 ~~i~~~~~-~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~-----------~~l~~~~~vi~~D~~-G 85 (299)
-+++++.+ .|.|.-+.. .+.|.++.+-|.++++.....-.-..|... .-..+-..++-+|.| |
T Consensus 24 Gyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvG 103 (452)
T d1ivya_ 24 GYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAG 103 (452)
T ss_dssp EEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTT
T ss_pred eeeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCC
Confidence 35666544 787776653 257888999888765533211000111100 001223569999986 9
Q ss_pred CCCCCCCCCCCCCcccHHHHHHHHHHHH----Hh---cCCCcEEEEeeCccHHHHHHHHHHc----cCcccEEEEecCCC
Q 022316 86 HEFGAAAISDDEPVLSVDDLADQIAEVL----NH---FGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLC 154 (299)
Q Consensus 86 ~G~S~~~~~~~~~~~~~~~~~~~l~~~l----~~---l~~~~~~lvG~S~Gg~va~~~a~~~----p~~v~~lvl~~~~~ 154 (299)
.|.|..... ....+..+.++|+.+++ +. +.-.+++|.|-|+||..+..+|..- .-.++++++.++..
T Consensus 104 tGfS~~~~~--~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~ 181 (452)
T d1ivya_ 104 VGFSYSDDK--FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS 181 (452)
T ss_dssp STTCEESSC--CCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred cccccCCCC--CCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCcc
Confidence 999865322 22345566666665544 33 2336899999999999988887642 23489999988866
Q ss_pred CC
Q 022316 155 KA 156 (299)
Q Consensus 155 ~~ 156 (299)
..
T Consensus 182 d~ 183 (452)
T d1ivya_ 182 SY 183 (452)
T ss_dssp BH
T ss_pred Cc
Confidence 43
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.56 E-value=0.0001 Score=61.56 Aligned_cols=112 Identities=14% Similarity=0.061 Sum_probs=69.6
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHHHHH---
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVL--- 113 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~~~l--- 113 (299)
+-|++|++||.+....+..... + ........++.-|+++++| |+-.+.. .....+.+-+.|+...|.-+-
T Consensus 111 ~lPV~v~ihGG~~~~gs~~~~~-~-~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~-~~~~~gN~Gl~Dq~~AL~WV~~nI 187 (542)
T d2ha2a1 111 PTPVLIWIYGGGFYSGAASLDV-Y-DGRFLAQVEGAVLVSMNYRVGTFGFLALPG-SREAPGNVGLLDQRLALQWVQENI 187 (542)
T ss_dssp CEEEEEEECCSTTTCCCTTSGG-G-CTHHHHHHHCCEEEEECCCCHHHHHCCCTT-CSSCCSCHHHHHHHHHHHHHHHHG
T ss_pred CCcEEEEEEECccccccCcccc-c-CchhhhhhccceeEeeeeeccceeeecccc-cccCCCcCCcccHHHHHHHHHHHH
Confidence 4489999999876433322222 1 1111112358889999998 4432221 111224566778776665554
Q ss_pred HhcCC--CcEEEEeeCccHHHHHHHHHHc--cCcccEEEEecCCCC
Q 022316 114 NHFGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (299)
Q Consensus 114 ~~l~~--~~~~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~~~ 155 (299)
...|. ++|+|+|+|.||..+..+.... ...+.++|+.+....
T Consensus 188 ~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 188 AAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred HHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 44454 5899999999999887665532 357999999987554
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.55 E-value=0.00026 Score=58.08 Aligned_cols=114 Identities=17% Similarity=0.098 Sum_probs=70.5
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcc-cCceEEEEECCCC--CCC--CCCCCCCCCCcccHHHHHHHHHHHHH-
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPG--HEF--GAAAISDDEPVLSVDDLADQIAEVLN- 114 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l-~~~~~vi~~D~~G--~G~--S~~~~~~~~~~~~~~~~~~~l~~~l~- 114 (299)
+-|++|++||.+....+..... + .. ..++ .++.-|+++++|= +|. .........+.+-+.|+...|.-+-+
T Consensus 95 ~lPV~v~ihGG~~~~g~~~~~~-~-~~-~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~n 171 (483)
T d1qe3a_ 95 NLPVMVWIHGGAFYLGAGSEPL-Y-DG-SKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVREN 171 (483)
T ss_dssp SEEEEEEECCSTTTSCCTTSGG-G-CC-HHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEeecccccCCccccc-c-cc-ccccccCceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHH
Confidence 4589999999876543322222 1 11 2223 3478899999873 221 11000111245778887776665544
Q ss_pred --hcCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCCCc
Q 022316 115 --HFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKAP 157 (299)
Q Consensus 115 --~l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~~~ 157 (299)
..|. ++|+|+|||.||..+..++.. ....+.++|+.++.....
T Consensus 172 I~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~~~ 220 (483)
T d1qe3a_ 172 ISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTM 220 (483)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCB
T ss_pred HHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcccc
Confidence 4454 689999999999987766543 234799999999876543
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.25 E-value=0.00093 Score=55.28 Aligned_cols=123 Identities=15% Similarity=0.064 Sum_probs=72.5
Q ss_pred eEEEEeccC--CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCC--CC-CCCCCCCCCCCcccHHHH
Q 022316 31 SLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HE-FGAAAISDDEPVLSVDDL 105 (299)
Q Consensus 31 ~l~~~~~g~--~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G--~G-~S~~~~~~~~~~~~~~~~ 105 (299)
.|.+..... .+.|++|++||.+....+..... + .........+.-|+++++|= +| .+........+.+-+.|+
T Consensus 91 ~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~-~-~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq 168 (526)
T d1p0ia_ 91 YLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHV-Y-DGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQ 168 (526)
T ss_dssp EEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGG-G-CTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHH
T ss_pred EEEEEeCCCCCCCCceEEEEECCCcccccCcccc-c-CccccccccceeEEecccccccccccCCCCcccccccccccch
Confidence 454444322 34589999999887654433322 1 22111123578889999773 12 111011111245677887
Q ss_pred HHHHHHHHH---hcCC--CcEEEEeeCccHHHHHHHHH--HccCcccEEEEecCCCC
Q 022316 106 ADQIAEVLN---HFGL--GAVMCMGVTAGAYILTLFAM--KYRHRVLGLILVSPLCK 155 (299)
Q Consensus 106 ~~~l~~~l~---~l~~--~~~~lvG~S~Gg~va~~~a~--~~p~~v~~lvl~~~~~~ 155 (299)
...|.-+-+ ..|. ++|+|+|+|.||..+..+.. .....+.++|+.++...
T Consensus 169 ~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 169 QLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred hhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 776665544 4454 58999999999998765543 23356899998886654
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=97.16 E-value=0.00017 Score=60.08 Aligned_cols=112 Identities=21% Similarity=0.143 Sum_probs=66.2
Q ss_pred CCCeEEEecccccchhhhccccccCch-hhh--cccCceEEEEECCC----CCCCCCCCCCCCCCcccHHHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPE-ACS--LLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVL 113 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~-~~~--~l~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~l~~~l 113 (299)
+-|++|++||.+....+..... ... ... ....+.-|+++++| |+-.+..........+-+.|+...|.-+-
T Consensus 121 ~lPV~V~ihGG~f~~G~~~~~~--~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~ 198 (544)
T d1thga_ 121 KLPVMVWIYGGAFVYGSSAAYP--GNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVS 198 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCC--SHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCCccCCCccCC--cchhhhhhhhccCCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhh
Confidence 4589999999876543321100 011 111 23458899999988 33221100000113567777777666554
Q ss_pred Hh---cCC--CcEEEEeeCccHHHHHHHHHHc--------cCcccEEEEecCCC
Q 022316 114 NH---FGL--GAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLC 154 (299)
Q Consensus 114 ~~---l~~--~~~~lvG~S~Gg~va~~~a~~~--------p~~v~~lvl~~~~~ 154 (299)
+. .|. ++|+|+|+|.||..+..++... ...+.++|+.++..
T Consensus 199 ~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 199 DNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 44 444 6899999999998665544321 24799999999754
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.13 E-value=0.00072 Score=56.08 Aligned_cols=123 Identities=12% Similarity=0.016 Sum_probs=72.9
Q ss_pred ceEEEEecc-C-CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCC----CCCCCCCCCCCCCcccHH
Q 022316 30 GSLSVTIYG-D-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG----HEFGAAAISDDEPVLSVD 103 (299)
Q Consensus 30 ~~l~~~~~g-~-~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G----~G~S~~~~~~~~~~~~~~ 103 (299)
-.|.+..-. . .+.|++|++||.+....+..... + ........++.-|+++++|= +-.+. ......+.+-+.
T Consensus 92 L~LnI~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~-~-~~~~~~~~~~vvvVt~nYRlg~~GFl~~~-~~~~~~gN~Gl~ 168 (532)
T d1ea5a_ 92 LYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDV-Y-NGKYLAYTEEVVLVSLSYRVGAFGFLALH-GSQEAPGNVGLL 168 (532)
T ss_dssp CEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGG-G-CTHHHHHHHTCEEEECCCCCHHHHHCCCT-TCSSSCSCHHHH
T ss_pred CEEEEEeCCCCCCCCcEEEEEEcCCcccccCCccc-c-CcchhhcccCccEEEEeeccccccccccc-cccCCCCcccch
Confidence 355555422 1 34589999999875433322222 1 22112234588889988773 21111 111122456778
Q ss_pred HHHHHHHHHHH---hcCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCC
Q 022316 104 DLADQIAEVLN---HFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (299)
Q Consensus 104 ~~~~~l~~~l~---~l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~ 155 (299)
|+...|.-+-+ ..|. ++|+|+|+|.||..+..+... ....+.++|+.+....
T Consensus 169 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 169 DQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 87766665544 4454 589999999999977665542 2357999999987654
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=97.12 E-value=0.00019 Score=59.64 Aligned_cols=121 Identities=16% Similarity=0.077 Sum_probs=68.5
Q ss_pred eEEEEec-cC---CCCCeEEEecccccchhhhccccccCch-h-h--hcccCceEEEEECCCC----CCCCCCCCCCCCC
Q 022316 31 SLSVTIY-GD---QDKPALVTYPDLALNYMSCFQGLFFCPE-A-C--SLLLHNFCIYHINPPG----HEFGAAAISDDEP 98 (299)
Q Consensus 31 ~l~~~~~-g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~-~-~--~~l~~~~~vi~~D~~G----~G~S~~~~~~~~~ 98 (299)
.|.+.+. .. .+.|++|++||.+....+.. . +... + . ....++.-|+++++|- +-..........+
T Consensus 99 ~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~--~-~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~g 175 (534)
T d1llfa_ 99 TINVVRPPGTKAGANLPVMLWIFGGGFEIGSPT--I-FPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSG 175 (534)
T ss_dssp EEEEEECTTCCTTCCEEEEEEECCSTTTSCCGG--G-SCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCT
T ss_pred EEEEEECCCCCCCCCCeEEEEECCCccccCCCC--C-CCchhccchhhhccCCeEEEEeecCCCcccccCCccccccccc
Confidence 5555542 21 35689999999875332211 1 1111 1 1 1225688999999983 2111100000012
Q ss_pred cccHHHHHHHHHHHH---HhcCC--CcEEEEeeCccHHHHH-HHHHHc----c---CcccEEEEecCCC
Q 022316 99 VLSVDDLADQIAEVL---NHFGL--GAVMCMGVTAGAYILT-LFAMKY----R---HRVLGLILVSPLC 154 (299)
Q Consensus 99 ~~~~~~~~~~l~~~l---~~l~~--~~~~lvG~S~Gg~va~-~~a~~~----p---~~v~~lvl~~~~~ 154 (299)
.+-+.|+...|.-+- ...|. ++|+|+|+|.||..+. .+.... | ..+.++|+.++..
T Consensus 176 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 176 NAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred ccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 466777766555544 44454 6899999999998554 444322 1 2589999998754
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.00076 Score=55.92 Aligned_cols=121 Identities=15% Similarity=0.091 Sum_probs=73.5
Q ss_pred ceEEEEec-cC---CCCCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCC--CC-CCCCCCCCCCCcccH
Q 022316 30 GSLSVTIY-GD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HE-FGAAAISDDEPVLSV 102 (299)
Q Consensus 30 ~~l~~~~~-g~---~~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G--~G-~S~~~~~~~~~~~~~ 102 (299)
-.|.+... +. .+-|++|++||.+....+. .. + ........++.-|+++++|= +| .+... ......+-+
T Consensus 97 L~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~--~~-~-~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~-~~~~gN~Gl 171 (532)
T d2h7ca1 97 LYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAA--ST-Y-DGLALAAHENVVVVTIQYRLGIWGFFSTGD-EHSRGNWGH 171 (532)
T ss_dssp CEEEEEECSCTTSCCCEEEEEEECCSTTTSCCS--TT-S-CCHHHHHHHTCEEEEECCCCHHHHHCCCSS-TTCCCCHHH
T ss_pred CEEEEEECCCCCCCCCcEEEEEEeCCccccccc--cc-C-CchhhhhcCceEEEEEeeccCCCccccccc-ccccccccc
Confidence 35555543 21 2348999999987754332 12 2 22122234588899999873 23 11111 111235777
Q ss_pred HHHHHHHHHHHH---hcCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCC
Q 022316 103 DDLADQIAEVLN---HFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (299)
Q Consensus 103 ~~~~~~l~~~l~---~l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~ 155 (299)
.|+...|.-+-+ ..|. ++|+|+|+|.||..+..++.. ....+.++|+.++...
T Consensus 172 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 172 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhccccc
Confidence 887766655544 4454 689999999999987766543 2347899999987654
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=97.06 E-value=0.00045 Score=57.12 Aligned_cols=112 Identities=13% Similarity=0.030 Sum_probs=66.4
Q ss_pred CCeEEEecccccchhhhccccccCchhhhcccCceEEEEECCCC--CC--CCCCCCCCCCCcccHHHHHHHHHHHHH---
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HE--FGAAAISDDEPVLSVDDLADQIAEVLN--- 114 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~~~~vi~~D~~G--~G--~S~~~~~~~~~~~~~~~~~~~l~~~l~--- 114 (299)
-|++|++||.+....+.. .+..........++.-|+++++|= +| .+..........+-+.|+...|.-+-+
T Consensus 97 ~PV~v~ihGG~~~~G~~~--~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~ 174 (517)
T d1ukca_ 97 LPVWLFIQGGGYAENSNA--NYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIE 174 (517)
T ss_dssp EEEEEEECCSTTTSCCSC--SCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGG
T ss_pred ceEEEEEcCCccccCCCc--cccchhhhhhhccccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHHH
Confidence 389999999876543322 222222222224567888999874 11 111000011234677787766665544
Q ss_pred hcCC--CcEEEEeeCccHHHHHHHHHH-c---cCcccEEEEecCCCC
Q 022316 115 HFGL--GAVMCMGVTAGAYILTLFAMK-Y---RHRVLGLILVSPLCK 155 (299)
Q Consensus 115 ~l~~--~~~~lvG~S~Gg~va~~~a~~-~---p~~v~~lvl~~~~~~ 155 (299)
..|. ++|+|+|+|.||..+..+... . ...+.++|+.++...
T Consensus 175 ~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 175 QFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred hhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 4454 589999999999876544332 2 247999999987554
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.89 E-value=0.0014 Score=54.95 Aligned_cols=113 Identities=16% Similarity=0.073 Sum_probs=66.4
Q ss_pred CCCeEEEecccccchhhhccc----cccCchhhhcc-cCceEEEEECCCC--CC-CCCCCCCCCCCcccHHHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQG----LFFCPEACSLL-LHNFCIYHINPPG--HE-FGAAAISDDEPVLSVDDLADQIAEV 112 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~----~~w~~~~~~~l-~~~~~vi~~D~~G--~G-~S~~~~~~~~~~~~~~~~~~~l~~~ 112 (299)
+-|++|++||.+....+.... .+.+.. ..+. ..+.-|+++++|= +| .+... ....+.+-+.|+...|.-+
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg-~~la~~~~vIvVt~nYRlg~~GFl~~~~-~~~~gN~Gl~Dq~~AL~WV 174 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDG-EEIATRGNVIVVTFNYRVGPLGFLSTGD-SNLPGNYGLWDQHMAIAWV 174 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCC-HHHHHHHTCEEEEECCCCHHHHHCCCSS-TTCCCCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccch-hhhhccCCEEEEeecccccccccccccc-cCCCccchhhHHHHHHHHH
Confidence 348999999987644332111 100011 1122 2368889999772 12 11111 1112457788887776655
Q ss_pred HHh---cCC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCC
Q 022316 113 LNH---FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (299)
Q Consensus 113 l~~---l~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~ 155 (299)
-+. .|. ++|+|+|+|.||..+..+... ....+.++|+.++...
T Consensus 175 ~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 224 (579)
T d2bcea_ 175 KRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVGL 224 (579)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCTT
T ss_pred hhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCcc
Confidence 444 444 589999999999987655442 3457999999996554
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.81 E-value=0.0016 Score=48.38 Aligned_cols=31 Identities=23% Similarity=0.206 Sum_probs=23.3
Q ss_pred HHHHHHhcCCCcEEEEeeCccHHHHHHHHHH
Q 022316 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 109 l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~ 139 (299)
+..+++..+-.++.+.|||+||++|..+|..
T Consensus 123 v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 123 VQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 3444444555689999999999999887764
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.80 E-value=0.0013 Score=49.11 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=23.6
Q ss_pred HHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH
Q 022316 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 108 ~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~ 139 (299)
.|..+++.....++.+.|||+||++|..+|..
T Consensus 126 ~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 126 ELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 33444444445689999999999999988765
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.78 E-value=0.0017 Score=48.36 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=24.9
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~ 139 (299)
+.+.+.++..+..++.+.|||+||++|..+|..
T Consensus 120 ~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 120 ATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 334445555566789999999999999987764
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.73 E-value=0.0012 Score=49.01 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=24.5
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~ 139 (299)
+.+..+++..+..++.+.|||+||++|..+|..
T Consensus 113 ~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 113 SLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 344444455555689999999999999987764
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.68 E-value=0.0026 Score=53.07 Aligned_cols=113 Identities=15% Similarity=-0.003 Sum_probs=67.0
Q ss_pred CCCeEEEecccccchhhhccccccCchhhhcccC-ceEEEEECCCC--CC--CCCC-----CCCCCCCcccHHHHHHHHH
Q 022316 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPG--HE--FGAA-----AISDDEPVLSVDDLADQIA 110 (299)
Q Consensus 41 ~~p~lvl~HG~~~~~~~~~~~~~w~~~~~~~l~~-~~~vi~~D~~G--~G--~S~~-----~~~~~~~~~~~~~~~~~l~ 110 (299)
+-|++|++||.+....+..... +.. ..+..+ +.-|+++++|= +| .... ......+.+-+.|+...|.
T Consensus 138 ~lPV~V~ihGG~f~~Gs~~~~~-~~~--~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~ 214 (571)
T d1dx4a_ 138 GLPILIWIYGGGFMTGSATLDI-YNA--DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 214 (571)
T ss_dssp SEEEEEEECCSTTTCCCTTCGG-GCC--HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCccCCCCcccc-cch--hhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHH
Confidence 3489999999876543322222 111 122233 57778888662 11 1000 0001124577888877776
Q ss_pred HHHHhc---CC--CcEEEEeeCccHHHHHHHHHH--ccCcccEEEEecCCCCC
Q 022316 111 EVLNHF---GL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKA 156 (299)
Q Consensus 111 ~~l~~l---~~--~~~~lvG~S~Gg~va~~~a~~--~p~~v~~lvl~~~~~~~ 156 (299)
-+-+.+ |. ++|+|+|+|.||..+..+... ....+.++|+.+.....
T Consensus 215 WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~~ 267 (571)
T d1dx4a_ 215 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMNA 267 (571)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTTS
T ss_pred HHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccccC
Confidence 655444 43 689999999999987755443 23468888888865543
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.65 E-value=0.0017 Score=48.37 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc
Q 022316 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (299)
Q Consensus 107 ~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~ 140 (299)
+.+..+++.....++++.|||+||++|..++...
T Consensus 126 ~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 126 QKVEDAVREHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcceeeeccchHHHHHHHHHHHH
Confidence 3344444455556899999999999999888754
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.45 E-value=0.062 Score=42.60 Aligned_cols=129 Identities=10% Similarity=0.066 Sum_probs=78.3
Q ss_pred eeecC--CceEEEEeccC----CCCCeEEEecccccchhhhccccccCchh----------hhcccCceEEEEEC-CCCC
Q 022316 24 LIKTS--HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEA----------CSLLLHNFCIYHIN-PPGH 86 (299)
Q Consensus 24 ~i~~~--~~~l~~~~~g~----~~~p~lvl~HG~~~~~~~~~~~~~w~~~~----------~~~l~~~~~vi~~D-~~G~ 86 (299)
+++++ +..|+|.-+.. .+.|.|+.+-|.++++.....-.--.|.. ..-..+-..++-+| ..|.
T Consensus 20 yl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGt 99 (421)
T d1wpxa1 20 YLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNV 99 (421)
T ss_dssp EEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTS
T ss_pred eeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCC
Confidence 56663 34787775543 35788999988776543321100000100 00112236799999 5599
Q ss_pred CCCCCCCCCCCCcccHHHHHHHHHHHHHh----c-----CCCcEEEEeeCccHHHHHHHHHHc---c---CcccEEEEec
Q 022316 87 EFGAAAISDDEPVLSVDDLADQIAEVLNH----F-----GLGAVMCMGVTAGAYILTLFAMKY---R---HRVLGLILVS 151 (299)
Q Consensus 87 G~S~~~~~~~~~~~~~~~~~~~l~~~l~~----l-----~~~~~~lvG~S~Gg~va~~~a~~~---p---~~v~~lvl~~ 151 (299)
|.|....+ ...+-.+.++|+.++++. . ...+++|.|-|+||..+..+|.+- . -.++++++.+
T Consensus 100 GfSy~~~~---~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGn 176 (421)
T d1wpxa1 100 GFSYSGSS---GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGN 176 (421)
T ss_dssp TTCBCSSC---CCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEES
T ss_pred CceecCCc---cccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecC
Confidence 99964332 234556666776666632 2 235799999999999988877532 2 2478999988
Q ss_pred CCCC
Q 022316 152 PLCK 155 (299)
Q Consensus 152 ~~~~ 155 (299)
+...
T Consensus 177 g~~d 180 (421)
T d1wpxa1 177 GLTD 180 (421)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 7664
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=95.68 E-value=0.076 Score=42.92 Aligned_cols=114 Identities=12% Similarity=0.106 Sum_probs=68.4
Q ss_pred CCeEEEecccccchhhhccccccCchhh----------hcccCceEEEEECCC-CCCCCCCCCCC------CCCcccHHH
Q 022316 42 KPALVTYPDLALNYMSCFQGLFFCPEAC----------SLLLHNFCIYHINPP-GHEFGAAAISD------DEPVLSVDD 104 (299)
Q Consensus 42 ~p~lvl~HG~~~~~~~~~~~~~w~~~~~----------~~l~~~~~vi~~D~~-G~G~S~~~~~~------~~~~~~~~~ 104 (299)
.|.+|.+-|.++++.....-.--.|... .-..+-..++-+|.| |.|.|...... .....+.++
T Consensus 67 ~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~~ 146 (483)
T d1ac5a_ 67 RPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLED 146 (483)
T ss_dssp CCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCHHH
Confidence 5889999888776533210000011100 011233679999975 99988653221 112345567
Q ss_pred HHHHHHHHHHh----c---CCCcEEEEeeCccHHHHHHHHHHcc------------CcccEEEEecCCCC
Q 022316 105 LADQIAEVLNH----F---GLGAVMCMGVTAGAYILTLFAMKYR------------HRVLGLILVSPLCK 155 (299)
Q Consensus 105 ~~~~l~~~l~~----l---~~~~~~lvG~S~Gg~va~~~a~~~p------------~~v~~lvl~~~~~~ 155 (299)
.++++..+|+. . .-.+++|.|-|+||..+-.+|..-- =.++++.+.++...
T Consensus 147 ~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T d1ac5a_ 147 VTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccC
Confidence 77777666643 2 2368999999999998887776421 14888888877654
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=95.58 E-value=0.027 Score=39.41 Aligned_cols=80 Identities=10% Similarity=0.105 Sum_probs=53.7
Q ss_pred ceEEEEECCCCCCCCCC-CCCCCCCcccHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc----cCcccEEEE
Q 022316 75 NFCIYHINPPGHEFGAA-AISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLIL 149 (299)
Q Consensus 75 ~~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~----p~~v~~lvl 149 (299)
...+..++++.-..... .........-..++.+.+.+..+...-.+++|+|+|.|+.|+-..+... .++|.++++
T Consensus 51 ~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvl 130 (197)
T d1cexa_ 51 GVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVL 130 (197)
T ss_dssp TEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEE
T ss_pred cceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEE
Confidence 56666777654321100 0001111234567777888888888878999999999999998887754 357999999
Q ss_pred ecCCC
Q 022316 150 VSPLC 154 (299)
Q Consensus 150 ~~~~~ 154 (299)
++-+.
T Consensus 131 fGDP~ 135 (197)
T d1cexa_ 131 FGYTK 135 (197)
T ss_dssp ESCTT
T ss_pred EeCCC
Confidence 98644
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=93.92 E-value=0.069 Score=37.61 Aligned_cols=77 Identities=17% Similarity=0.029 Sum_probs=49.5
Q ss_pred ceEEEEECCCCCCCCCCCCCCCCCcc--c----HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHc--------
Q 022316 75 NFCIYHINPPGHEFGAAAISDDEPVL--S----VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-------- 140 (299)
Q Consensus 75 ~~~vi~~D~~G~G~S~~~~~~~~~~~--~----~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~~-------- 140 (299)
+-.+..+++|..-..... . ...| | ..++.+.|....++..-.+++|+|+|.|+.|+-..+...
T Consensus 35 ~~~~~~v~YPA~~~~~~~-~--~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~ 111 (207)
T d1qoza_ 35 GTTSEAIVYPACGGQASC-G--GISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGIT 111 (207)
T ss_dssp TEEEEECCSCCCSSCGGG-T--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBC
T ss_pred CCeEEEeeeccccccccc-c--cccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccc
Confidence 567788888886422110 0 0111 1 344555666666677778999999999999998776421
Q ss_pred ----------cCcccEEEEecCCC
Q 022316 141 ----------RHRVLGLILVSPLC 154 (299)
Q Consensus 141 ----------p~~v~~lvl~~~~~ 154 (299)
.++|+++++++-+.
T Consensus 112 ~~~~~l~~~~~~~V~avvl~GdP~ 135 (207)
T d1qoza_ 112 NTAVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp CCSCCSCHHHHHHEEEEEEESCTT
T ss_pred cCCCCCChhhhhcEEEEEEEeCCC
Confidence 23688888887443
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=93.21 E-value=0.11 Score=36.65 Aligned_cols=79 Identities=13% Similarity=0.062 Sum_probs=48.0
Q ss_pred ceEEEEECCCCCCCCCCCCCCCCCccc----HHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHH-----------
Q 022316 75 NFCIYHINPPGHEFGAAAISDDEPVLS----VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK----------- 139 (299)
Q Consensus 75 ~~~vi~~D~~G~G~S~~~~~~~~~~~~----~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~va~~~a~~----------- 139 (299)
+-.+..+++|........... .-..| ..++.+.|....++..-.+++|+|+|-|+.|+-.++..
T Consensus 35 ~~~~~~v~YpA~~~~~~~~~~-~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~ 113 (207)
T d1g66a_ 35 GSTAEAINYPACGGQSSCGGA-SYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNT 113 (207)
T ss_dssp TCEEEECCCCCCSSCGGGTSC-CHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCC
T ss_pred CCeeEEecccccccccccccc-cccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHhccCCcccccccc
Confidence 567788898875322110000 00112 23355555566666677899999999999999877642
Q ss_pred -------ccCcccEEEEecCCC
Q 022316 140 -------YRHRVLGLILVSPLC 154 (299)
Q Consensus 140 -------~p~~v~~lvl~~~~~ 154 (299)
-.++|.++++++-+.
T Consensus 114 ~~~l~~~~~~~v~avvl~GdP~ 135 (207)
T d1g66a_ 114 AVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp SCCSCHHHHHHEEEEEEESCTT
T ss_pred ccCCCchhhhceeeEEEecCCC
Confidence 123577778777543
|