Citrus Sinensis ID: 022348

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
Protein Sequence
MASTVILSQTATLSSSSSSTTTTAKFSSLTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRIIDPCST
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHcccccccccccEEEEccccccccccHHHHHHHHHHcccccccEEEEEccHHHHHHHHHcccEEEEEcccccHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccEEEEEEcccEEEccHHHHHHHHHHHHHHccccccHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccHHHHHHccEEEEccccccccccHHHHHHHHHHccccHcHEEEEEccHHHHHHHHHcccEEEEEcccccHHHHHHcccccc
Coil and Loop (DISEMBL)
MASTVILSQtatlssssssttttakfsslthnpifhtnalrfksnkkplslsLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFshfnvrcdpssqqslnwdpeFYDVLQnqigggkpkMRWYfkehgwpsstifdnppvtdddqAKLIDLIQDWKTERYQQIIKsgtveprpgvlRLMDEAKAAGKKVAVCSAATKSSVILCLENLigmerfegldcflagddvkqkkpdpsiYVTAAKRlgisekdclVVEDSVIGLQAATRAGMACVITYTsstaeqvriidpcst
Flexible Loop (DISEMBL)
mastvilsqtatlsssssstTTTAKFSSLTHNPIFHtnalrfksnkkPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIiksgtveprpgvLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGddvkqkkpdPSIYVTAakrlgisekdcLVVEDSVIGLQAATRAGMACVITYtsstaeqvriidpcst
Low Complexity Region (SEG)
MASTVIlsqtatlssssssttttakfssltHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRIIDPCST
Disordered region (IsUnstruct)
********************************PIFHTNALR************************SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRII*****
Disordered Region (DISOPRED)
********************************************************************ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRIIDPCS*
Disordered Region (DISEMBL)
*************************FSSLTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEA**********SAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRIIDPCST
Disordered Region (DISPRO)
***************************************************************SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRII**CST
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASTVILSQTATLSSSSSSTTTTAKFSSLTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRIIDPCST
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	298	2.2.26 [Sep-21-2011]
O33513	227	Protein CbbY OS=Rhodobact	yes	no	0.657	0.863	0.355	2e-26
P95649	230	Protein CbbY OS=Rhodobact	yes	no	0.647	0.839	0.320	1e-24
P40119	254	Protein CbbY, chromosomal	yes	no	0.667	0.783	0.302	2e-24
Q04541	254	Protein CbbY, plasmid OS=	yes	no	0.667	0.783	0.298	1e-23
P54607	220	Uncharacterized protein Y	yes	no	0.624	0.845	0.290	7e-14
P77475	188	Fructose-1-phosphate phos	N/A	no	0.587	0.930	0.267	2e-13
P77366	219	Beta-phosphoglucomutase O	N/A	no	0.647	0.881	0.254	2e-09
Q9X0Y1	216	Phosphorylated carbohydra	yes	no	0.627	0.865	0.251	2e-09
O06995	226	Beta-phosphoglucomutase O	no	no	0.604	0.796	0.269	7e-09
Q8ZLK5	252	Phosphoglycolate phosphat	no	no	0.734	0.869	0.253	1e-08

>sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 114/222 (51%), Gaps = 26/222 (11%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNW--DPEFYDVLQNQIGG 124
           L+ALIFD DG + E+E +HRQA+N+ F+           Q L+W    E Y  L    GG
Sbjct: 3   LKALIFDVDGTLAETEEVHRQAFNETFA----------AQGLDWYWSKEDYRTLLRTTGG 52

Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
            K +M  + +  G   S             AK+ DL    KT+RY +II SG V   PGV
Sbjct: 53  -KERMAKHRENLGSGPS------------DAKIADL-HKAKTQRYVEIIASGQVGLLPGV 98

Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
             L+D AKA+G ++A+ +  T+++V   +         +  +   AGD+V QKKP P +Y
Sbjct: 99  AELIDRAKASGLRLAIATTTTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAPDVY 158

Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286
           + A + LG+    CL  EDS  GL +A  AG+  V+T +  T
Sbjct: 159 LRALQGLGLPPAACLAFEDSRAGLASARAAGLRVVLTPSEYT 200

Rhodobacter capsulatus (taxid: 1061)

>sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 22/215 (10%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           ++A++FD DG + E+E LHR+A+N+ F+   V           WD E Y  L    GG +
Sbjct: 2   IEAILFDVDGTLAETEELHRRAFNETFAALGV--------DWFWDREEYRELLTTTGGKE 53

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
              R+   + G P+       P+ D         I   KTER+  ++  G +  RPG+  
Sbjct: 54  RIARFLRHQKGDPAPL-----PIAD---------IHRAKTERFVALMAEGEIALRPGIAD 99

Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
           L+ EAK AG ++AV +  +  +V        G    E  D   AGD V +KKP P IY  
Sbjct: 100 LIAEAKRAGIRLAVATTTSLPNVEALCRACFGHPAREIFDVIAAGDMVAEKKPSPDIYRL 159

Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 281
           A + L +  +  + +EDS+ GL+AA  AG+ C+++
Sbjct: 160 ALRELDVPPERAVALEDSLNGLRAAKGAGLRCIVS 194

Rhodobacter sphaeroides (taxid: 1063)

>sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 29/228 (12%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           +QALIFD DG + ++E  H QA+N AF+   +           WD   Y  L  ++ GGK
Sbjct: 1   MQALIFDVDGTLADTESAHLQAFNAAFAEVGL--------DWYWDAPLYTRLL-KVAGGK 51

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAK------LIDLIQDWKTERYQQIIKSGTVEP 180
            ++  Y++              + D ++A+       ID +   KT  Y + + +G +  
Sbjct: 52  ERLMHYWR--------------MVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPL 97

Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD 240
           RPG+ RL+DEA  AG  +A+ +  T +++   L+  +G +                KKP 
Sbjct: 98  RPGIARLIDEAGEAGLPLAIATTTTPANLDALLQAPLGADWRRRFAAIGDAGTTAIKKPA 157

Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE 288
           P +Y+   +RLG+   DCL +EDS  GL+AA  AG+  V+T T+ +A+
Sbjct: 158 PDVYLAVLERLGLEGGDCLAIEDSANGLRAARAAGIPTVVTPTAFSAQ 205

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666)

>sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1

 Score =  110 bits (274), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 29/228 (12%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           +QALIFD DG + ++E  H QA+N AF+   +          +WD   Y  L  ++ GGK
Sbjct: 1   MQALIFDVDGTLADTETAHLQAFNAAFAEVGL--------DWHWDAPLYTRLL-KVAGGK 51

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAK------LIDLIQDWKTERYQQIIKSGTVEP 180
            ++  Y++              + D ++A+       ID +   KT  Y + + +G +  
Sbjct: 52  ERLMHYWR--------------MVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPL 97

Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD 240
           RPG+ RL+ EA  AG  +A+ +  T +++   L+  +G +                KKP 
Sbjct: 98  RPGIARLIAEAGEAGLPLAIATTTTPANLDALLQAHLGADWRGRFAAICDAGTTAIKKPA 157

Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE 288
           P +Y+   +RLG+   DCL +EDS  GL+AA  AG+  V+T T+ +A+
Sbjct: 158 PDVYLAVLERLGLEAGDCLAIEDSGNGLRAARAAGIPTVVTPTTFSAQ 205

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666)

>sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168) GN=yhcW PE=3 SV=1

 Score = 78.2 bits (191), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 38/224 (16%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFS-HFNVRCDPSSQQSLNWDPEF--YDVLQNQIG 123
           ++ALIFD DG+I+++E    +   + F  H +V       + +     F  ++ L+ QIG
Sbjct: 2   IKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQIG 61

Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
                                    +  ++  +L       + ER+ + ++S   + RPG
Sbjct: 62  -----------------------KKLNHEELTQL-------RRERFAKRMESE--KARPG 89

Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
           V   ++ AK  G K+ + S++    V   L+  IG+  F+  +     DDV++ KP+P +
Sbjct: 90  VEAYLNAAKDLGLKIGLASSSDYKWVSGHLKQ-IGL--FDDFEVIQTADDVEEVKPNPEL 146

Query: 244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287
           Y+ AAK LG+S  +CL  EDSV G  AA RAGM CVI     T 
Sbjct: 147 YLLAAKNLGVSPAECLAFEDSVNGSIAAKRAGMKCVIVPNKVTG 190

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) GN=yqaB PE=1 SV=1

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 38/213 (17%)

Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
            LIFD DG I+++E  HR+A+ +   H+ ++ D  +  +LN  P                
Sbjct: 7   GLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMIALNGSPT--------------- 51

Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKL-IDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
             W   +             + + +QA L    +   KTE  + ++   +VEP P    L
Sbjct: 52  --WRIAQ------------AIIELNQADLDPHALAREKTEAVRSMLLD-SVEPLP----L 92

Query: 188 MDEAKA-AGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
           +D  K+  G++       ++S++   L   +G+  +   D  +A D VK  KP P  ++ 
Sbjct: 93  VDVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRHY--FDAVVAADHVKHHKPAPDTFLL 150

Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            A+R+G+    C+V ED+  G+QAA  AGM  V
Sbjct: 151 CAQRMGVQPTQCVVFEDADFGIQAARAAGMDAV 183

Catalyzes strongly the dephosphorylation of fructose-1-phosphate (Fru1P) and slightly the dephosphorylation of 6-phosphogluconate (6P-Glu). It has low beta-phosphoglucomutase activity.

Escherichia coli (strain K12) (taxid: 83333)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|P77366|PGMB_ECOLI Beta-phosphoglucomutase OS=Escherichia coli (strain K12) GN=ycjU PE=1 SV=1

 Score = 63.2 bits (152), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 35/228 (15%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNW---DPEFYDVLQNQIG 123
           LQ +IFD DGVI ++ HLH QA+    +   +  D    +SL     D     +LQ+   
Sbjct: 3   LQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQH--- 59

Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP-RP 182
           GGK                          ++A+L       K   Y   ++  TV    P
Sbjct: 60  GGK-------------------EGDFNSQERAQL----AYRKNLLYVHSLRELTVNAVLP 96

Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
           G+  L+ + +A    V + S +  +  IL       +E  E          +K  KPDP 
Sbjct: 97  GIRSLLADLRAQQISVGLASVSLNAPTILA-----ALELREFFTFCADASQLKNSKPDPE 151

Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQV 290
           I++ A   LG+  + C+ +ED+  G+ A   +GM  V      T  Q+
Sbjct: 152 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQL 199

Catalyze the interconversion of D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), forming beta-D-glucose 1,6-(bis)phosphate (beta-G16P) as an intermediate. The beta-phosphoglucomutase (Beta-PGM) acts on the beta-C(1) anomer of G1P. Glucose or lactose are used in preference to maltose, which is only utilized after glucose or lactose has been exhausted. It play a key role in the regulation of the flow of carbohydrate intermediates in glycolysis and the formation of the sugar nucleotide UDP-glucose.

Escherichia coli (strain K12) (taxid: 83333)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 6

>sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1

 Score = 63.2 bits (152), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 32/219 (14%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           ++A+IFD DGV++++E L+ +AY         R   S  +    D      L  +I G  
Sbjct: 1   MEAVIFDMDGVLMDTEPLYFEAYR--------RVAESYGKPYTED------LHRRIMGVP 46

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
            +        G P   I        D        + + K   + +++K       PGV  
Sbjct: 47  ER-------EGLP---ILMEALEIKDSLENFKKRVHEEKKRVFSELLKEN-----PGVRE 91

Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
            ++  K+   K+A+ ++  +   +  L  L  +E++   D  + GD VK  KPDP IY+ 
Sbjct: 92  ALEFVKSKRIKLALATSTPQREALERLRRL-DLEKY--FDVMVFGDQVKNGKPDPEIYLL 148

Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 285
             +RL +  +  +V EDS  G++AA  AG+  +     S
Sbjct: 149 VLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHS 187

Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates.

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM PE=1 SV=1

 Score = 61.6 bits (148), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 39/219 (17%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           ++A+IFD DGVI ++   H  A+     H   + D    + +N                 
Sbjct: 1   MKAVIFDLDGVITDTAEYHFLAWK----HIAEQIDIPFDRDMN----------------- 39

Query: 127 PKMRWYFKEHGWPSSTIFDNPPV--TDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR-PG 183
            +++   +E    S  IF       T+ ++ +L+      K   YQ +I   T E   PG
Sbjct: 40  ERLKGISREESLESILIFGGAETKYTNAEKQELMH----RKNRDYQMLISKLTPEDLLPG 95

Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD---VKQKKPD 240
           + RL+ + K    K+ + S++  +  IL         R   +D F A  D   + + KPD
Sbjct: 96  IGRLLCQLKNENIKIGLASSSRNAPKIL--------RRLAIIDDFHAIVDPTTLAKGKPD 147

Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           P I++TAA  L +S  DC  +ED+  G+ A   AGM  V
Sbjct: 148 PDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAV 186

Catalyze the interconversion of D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and forming beta-D-glucose 1,6-(bis)phosphate (beta-G16P) as an intermediate. The beta-phosphoglucomutase (Beta-PGM) acts on the beta-C(1) anomer of G1P. It play a key role in the regulation of the flow of carbohydrate intermediates in glycolysis and the formation of the sugar nucleotide UDP-glucose.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 6

>sp|Q8ZLK5|GPH_SALTY Phosphoglycolate phosphatase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gph PE=3 SV=1

 Score = 60.8 bits (146), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 14/233 (6%)

Query: 65  QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
           Q+++ + FD DG +++S      A + A     +      ++ + W     DVL  +   
Sbjct: 5   QNIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPV-AGEERVITWIGNGADVLMER--- 60

Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAK-LIDLIQDWKTERYQQIIKSGTVEPRPG 183
               + W  +E      T+   PPV +D  A+  + +++      Y ++ + GTV   P 
Sbjct: 61  ---ALTWAREERATLRKTM-GKPPVDEDIPAEEQVRILRKLFDRYYGEVAEEGTVL-FPH 115

Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
           V   +    A+G  + + +      V   LE+L   + F      + GDDV+ KKP P  
Sbjct: 116 VADTLGALHASGLSLGLVTNKPTPFVAPLLESLDIAKYFS---VVIGGDDVQNKKPHPEP 172

Query: 244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVRIIDP 295
            +  A RLG+  +  L V DS   +QAA  AG   V +TY  +  E + + +P
Sbjct: 173 LLLVASRLGMMPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIALSEP 225

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
255584279	309	2-deoxyglucose-6-phosphate phosphatase,	0.922	0.889	0.719	1e-117
297802106	314	hypothetical protein ARALYDRAFT_912489 [	0.909	0.863	0.726	1e-113
18420570	316	haloacid dehalogenase-like hydrolase fam	0.859	0.810	0.755	1e-112
22022552	316	AT4g39970/T5J17_140 [Arabidopsis thalian	0.859	0.810	0.755	1e-112
359496682	328	PREDICTED: protein CbbY-like [Vitis vini	0.788	0.716	0.827	1e-112
356525461	323	PREDICTED: protein CbbY, chromosomal-lik	0.802	0.739	0.798	1e-112
21593238	316	unknown [Arabidopsis thaliana]	0.859	0.810	0.748	1e-111
449451423	309	PREDICTED: protein CbbY-like [Cucumis sa	0.845	0.815	0.735	1e-111
356512689	310	PREDICTED: protein CbbY, chromosomal-lik	0.748	0.719	0.830	1e-110
224093744	261	predicted protein [Populus trichocarpa]	0.741	0.846	0.834	1e-110

>gi|255584279|ref|XP_002532876.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223527361|gb|EEF29505.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/289 (71%), Positives = 244/289 (84%), Gaps = 14/289 (4%)

Query: 3   STVILSQTATLSSSSSSTTTTAKFSSLTHNPIFHTNALR--FKSNKKPLSLSLTRKALRV 60
           ++++LSQ     S+ S    +  FS L+ +   H  ++R  F S +   SL  +     V
Sbjct: 2   ASMLLSQ-----SNLSPNPLSRSFSFLSKSQTLHFRSIRRSFPSRRSHQSLCFS-----V 51

Query: 61  SASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN 120
           SASS SL+ALIFDCDGVI+ESEHLHRQAYNDAF+HFNVRC  +S Q+L W P+FYDVLQN
Sbjct: 52  SASSASLEALIFDCDGVILESEHLHRQAYNDAFAHFNVRC--TSDQTLIWAPDFYDVLQN 109

Query: 121 QIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP 180
           +IGGGKPKMRWYFKEHGWPSSTIF+ PP  D+ +A LID +QDWKTERY++IIKSGTV+P
Sbjct: 110 RIGGGKPKMRWYFKEHGWPSSTIFETPPEDDESRANLIDTLQDWKTERYKEIIKSGTVQP 169

Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD 240
           RPGVL+LMDEAKAAGKK+AVCSAATKSSVILCLENLIGMERF+GLDCFLAGDDVK+KKPD
Sbjct: 170 RPGVLQLMDEAKAAGKKLAVCSAATKSSVILCLENLIGMERFQGLDCFLAGDDVKEKKPD 229

Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 289
           PSIYVTA+K+LG+SEKDCLVVEDSVIGLQAAT+AGM+CVITYTSSTA+Q
Sbjct: 230 PSIYVTASKKLGVSEKDCLVVEDSVIGLQAATKAGMSCVITYTSSTADQ 278

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802106|ref|XP_002868937.1| hypothetical protein ARALYDRAFT_912489 [Arabidopsis lyrata subsp. lyrata] gi|297314773|gb|EFH45196.1| hypothetical protein ARALYDRAFT_912489 [Arabidopsis lyrata subsp. lyrata]

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/278 (72%), Positives = 239/278 (85%), Gaps = 7/278 (2%)

Query: 13  LSSSSSSTTTTAKFSSLTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSA-SSQSLQALI 71
            S S++ +++ +  SSL   P F T  LRFKS     SL    +   VSA  S+SL+ALI
Sbjct: 12  FSPSTAGSSSVSSSSSLIGLPRFQT--LRFKSR----SLYSKSRVSPVSALPSRSLEALI 65

Query: 72  FDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW 131
           FDCDGVI+ESE+LHRQAYNDAFSHF+VRC PSS +SLNW  EFYD  QN +GGGKPKMRW
Sbjct: 66  FDCDGVILESENLHRQAYNDAFSHFDVRCPPSSSESLNWSLEFYDKFQNLVGGGKPKMRW 125

Query: 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEA 191
           YFKE+GWP+STIF++PP  DDD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEA
Sbjct: 126 YFKENGWPTSTIFESPPENDDDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEA 185

Query: 192 KAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL 251
           KAAGKK+AVCSAATKSSVILCLENLI +ERF+GLDCFLAGDDVK+KKPDPSIY+TAA++L
Sbjct: 186 KAAGKKLAVCSAATKSSVILCLENLIDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKL 245

Query: 252 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 289
           G+S KDCLV+EDSVIGLQAAT+AGM+CVITYTSST++Q
Sbjct: 246 GVSVKDCLVIEDSVIGLQAATKAGMSCVITYTSSTSDQ 283

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18420570|ref|NP_568077.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] gi|51969804|dbj|BAD43594.1| unnamed protein product [Arabidopsis thaliana] gi|51969872|dbj|BAD43628.1| unnamed protein product [Arabidopsis thaliana] gi|51970306|dbj|BAD43845.1| unnamed protein product [Arabidopsis thaliana] gi|332661747|gb|AEE87147.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/262 (75%), Positives = 229/262 (87%), Gaps = 6/262 (2%)

Query: 29  LTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASS-QSLQALIFDCDGVIIESEHLHRQ 87
           L   P F T  LRFKS       S +R +  VSA   +SL+ALIFDCDGVI+ESE+LHRQ
Sbjct: 29  LIGFPRFQT--LRFKSRS---VYSKSRVSSPVSALPLRSLEALIFDCDGVILESENLHRQ 83

Query: 88  AYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNP 147
           AYNDAFSHF+VRC PSS +SL+W  EFYD  QN +GGGKPKMRWYFKE+GWP+STIFD+P
Sbjct: 84  AYNDAFSHFDVRCPPSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSP 143

Query: 148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207
           P  DDD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKS
Sbjct: 144 PQNDDDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKS 203

Query: 208 SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 267
           SVILCLENLI +ERF+GLDCFLAGDDVK+KKPDPSIY+TAA++LG+S KDCLVVEDSVIG
Sbjct: 204 SVILCLENLIDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKLGVSVKDCLVVEDSVIG 263

Query: 268 LQAATRAGMACVITYTSSTAEQ 289
           LQAAT+AGM+CVITYTSST++Q
Sbjct: 264 LQAATKAGMSCVITYTSSTSDQ 285

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22022552|gb|AAM83233.1| AT4g39970/T5J17_140 [Arabidopsis thaliana] gi|23505871|gb|AAN28795.1| At4g39970/T5J17_140 [Arabidopsis thaliana]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/262 (75%), Positives = 229/262 (87%), Gaps = 6/262 (2%)

Query: 29  LTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASS-QSLQALIFDCDGVIIESEHLHRQ 87
           L   P F T  LRFKS       S +R +  VSA   +SL+ALIFDCDGVI+ESE+LHRQ
Sbjct: 29  LIGFPRFQT--LRFKSRS---VYSKSRVSSPVSALPLRSLEALIFDCDGVILESENLHRQ 83

Query: 88  AYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNP 147
           AYNDAFSHF+VRC PSS +SL+W  EFYD  QN +GGGKPKMRWYFKE+GWP+STIFD+P
Sbjct: 84  AYNDAFSHFDVRCPPSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSP 143

Query: 148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207
           P  DDD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKS
Sbjct: 144 PQNDDDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKS 203

Query: 208 SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 267
           SVILCLENLI +ERF+GLDCFLAGDDVK+KKPDPSIY+TAA++LG+S KDCLVVEDSVIG
Sbjct: 204 SVILCLENLIDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKLGVSVKDCLVVEDSVIG 263

Query: 268 LQAATRAGMACVITYTSSTAEQ 289
           LQAAT+AGM+CVITYTSST++Q
Sbjct: 264 LQAATKAGMSCVITYTSSTSDQ 285

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496682|ref|XP_003635299.1| PREDICTED: protein CbbY-like [Vitis vinifera]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/237 (82%), Positives = 215/237 (90%), Gaps = 2/237 (0%)

Query: 54  TRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPS-SQQSLNWDP 112
           T  AL VSASS +LQALIFDCDGVI+ESE LHR+AYNDAFSHFNVRC  S SQ  LNWD 
Sbjct: 62  TPNALSVSASS-TLQALIFDCDGVILESEDLHRRAYNDAFSHFNVRCPSSPSQHPLNWDS 120

Query: 113 EFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQI 172
            FYD LQN+IGGGKPKMRWYFKE+GWPSST+FD PP  D D+AKLID++QDWKTERY++I
Sbjct: 121 HFYDQLQNRIGGGKPKMRWYFKEYGWPSSTVFDTPPEDDGDRAKLIDILQDWKTERYKEI 180

Query: 173 IKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD 232
           IKSGTVEPRPGVLRLM+E KAAG K+AVCSAATKSSVILCLENLIG+ERF+GLDCFLAGD
Sbjct: 181 IKSGTVEPRPGVLRLMEETKAAGIKLAVCSAATKSSVILCLENLIGIERFQGLDCFLAGD 240

Query: 233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 289
           DVK+KKPDPSIY TA KRLG+SEKDCLVVEDSVIGLQAAT AGM+CVITYTSSTA+Q
Sbjct: 241 DVKEKKPDPSIYQTAVKRLGVSEKDCLVVEDSVIGLQAATGAGMSCVITYTSSTADQ 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525461|ref|XP_003531343.1| PREDICTED: protein CbbY, chromosomal-like [Glycine max]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/243 (79%), Positives = 216/243 (88%), Gaps = 4/243 (1%)

Query: 51  LSLTRKALRVSAS---SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQS 107
            S   ++  VSAS   S SLQALIFDCDGVI+ESEHLHRQAYNDAF HFNVRC  SS   
Sbjct: 50  FSSKHRSFSVSASASTSNSLQALIFDCDGVILESEHLHRQAYNDAFVHFNVRCPSSSSPG 109

Query: 108 -LNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKT 166
            LNWD +FYD LQN IGGGKPKMRWYFKEHGWP+ST+F  PP  D+D+AKLID +QDWKT
Sbjct: 110 PLNWDVQFYDELQNLIGGGKPKMRWYFKEHGWPTSTLFQTPPTNDEDRAKLIDTLQDWKT 169

Query: 167 ERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226
           ERY++IIKSGTV+PRPGVLRLMDEA+ AGKK+AVCSAATKSSVILCLENLIG+ERF+GLD
Sbjct: 170 ERYKEIIKSGTVKPRPGVLRLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQGLD 229

Query: 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286
           CFLAGDDVK+KKPDPSIYVTA+K+LGISEKDCLVVEDSVIGLQAAT+AGM+CV+TYT ST
Sbjct: 230 CFLAGDDVKEKKPDPSIYVTASKKLGISEKDCLVVEDSVIGLQAATQAGMSCVVTYTPST 289

Query: 287 AEQ 289
           AEQ
Sbjct: 290 AEQ 292

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593238|gb|AAM65187.1| unknown [Arabidopsis thaliana]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/262 (74%), Positives = 228/262 (87%), Gaps = 6/262 (2%)

Query: 29  LTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSA-SSQSLQALIFDCDGVIIESEHLHRQ 87
           L   P F T  LRFKS       S +R +  VSA  S+SL+ALIFDCDGVI+ESE+LHRQ
Sbjct: 29  LIGFPRFQT--LRFKSRS---VYSKSRASSPVSALPSRSLEALIFDCDGVILESENLHRQ 83

Query: 88  AYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNP 147
           AYNDAFSHF+VRC PSS  SL+W  EFYD  QN +GGGKPKMRWYFKE+GWP+STIFD+P
Sbjct: 84  AYNDAFSHFDVRCPPSSSASLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSP 143

Query: 148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207
           P  DDD+AKLID +QDWKT+RY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKS
Sbjct: 144 PQNDDDRAKLIDTLQDWKTDRYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKS 203

Query: 208 SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 267
           SVILCLENL+ +ERF+GLDCFLAGDDVK+KKPDPSIY+TAA++LG+S KDCLVV DSVIG
Sbjct: 204 SVILCLENLLDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKLGVSVKDCLVVGDSVIG 263

Query: 268 LQAATRAGMACVITYTSSTAEQ 289
           LQAAT+AGM+CVITYTSST++Q
Sbjct: 264 LQAATKAGMSCVITYTSSTSDQ 285

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451423|ref|XP_004143461.1| PREDICTED: protein CbbY-like [Cucumis sativus] gi|449520016|ref|XP_004167030.1| PREDICTED: protein CbbY-like [Cucumis sativus]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/257 (73%), Positives = 224/257 (87%), Gaps = 5/257 (1%)

Query: 33  PIFHTNALRFKSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDA 92
           P    + +RF++++K    S T K   +S S+ +LQALIFDCDGVI+ESEHLHRQAYNDA
Sbjct: 27  PSLPPSIIRFRTSRK----STTHKPFSLSVSA-TLQALIFDCDGVILESEHLHRQAYNDA 81

Query: 93  FSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDD 152
           F HF+VRC  S+ Q LNW  EFYD LQN+IGGGKPKMRWYFKE+GWPSSTIF+  P  D+
Sbjct: 82  FVHFDVRCPNSTSQPLNWSIEFYDELQNRIGGGKPKMRWYFKENGWPSSTIFEKAPEDDE 141

Query: 153 DQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212
           ++AKLID++QDWKTERY++IIKSGTV PRPGVLRLMDE K+AG+K+AVCSAATKSSVILC
Sbjct: 142 ERAKLIDILQDWKTERYKEIIKSGTVSPRPGVLRLMDETKSAGRKLAVCSAATKSSVILC 201

Query: 213 LENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAAT 272
           LENLIG++RF+ LDCFLAGDDVK+KKPDPSIY+TA+K+LG+SEKDCLVVEDSVIGLQAAT
Sbjct: 202 LENLIGIDRFQNLDCFLAGDDVKEKKPDPSIYITASKKLGVSEKDCLVVEDSVIGLQAAT 261

Query: 273 RAGMACVITYTSSTAEQ 289
           +AGM CVITYT+STA Q
Sbjct: 262 KAGMQCVITYTTSTANQ 278

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512689|ref|XP_003525049.1| PREDICTED: protein CbbY, chromosomal-like [Glycine max]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/224 (83%), Positives = 206/224 (91%), Gaps = 1/224 (0%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQS-LNWDPEFYDVLQNQIGGG 125
           LQALIFDCDGVI+ESEHLHRQAYNDAF HFNVRC  SS    LNWD +FYD LQN IGGG
Sbjct: 56  LQALIFDCDGVILESEHLHRQAYNDAFVHFNVRCPSSSSPGPLNWDVQFYDELQNLIGGG 115

Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
           KPKMRWYFKEHGWP ST+F+ PP  D+D+AKLID +QDWKTERY++IIKSGTV+PRPGVL
Sbjct: 116 KPKMRWYFKEHGWPKSTLFETPPTNDEDRAKLIDTLQDWKTERYKEIIKSGTVKPRPGVL 175

Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
           RLMDEA+ AGKK+AVCSAATKSSVILCLENLIG+ERF+GLDCFLAGDDVK+KKP PSIYV
Sbjct: 176 RLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQGLDCFLAGDDVKEKKPSPSIYV 235

Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 289
           TA+K+LGISEKDCLVVEDSVIGLQAAT+AGM+CV+TYT STAEQ
Sbjct: 236 TASKKLGISEKDCLVVEDSVIGLQAATQAGMSCVVTYTPSTAEQ 279

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093744|ref|XP_002309972.1| predicted protein [Populus trichocarpa] gi|222852875|gb|EEE90422.1| predicted protein [Populus trichocarpa]

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/223 (83%), Positives = 206/223 (92%), Gaps = 2/223 (0%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           L+ALIFDCDGVI+ESEHLHRQAYNDAF+HFNV C  SS   LNW P+FYDVLQN+IGGGK
Sbjct: 16  LEALIFDCDGVILESEHLHRQAYNDAFAHFNVIC--SSSLPLNWSPDFYDVLQNRIGGGK 73

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
           PKMRWYFKEHGWPSS +F+ PP  D+ +AKLID +QDWKTERY++IIKSGTVEPRPGVLR
Sbjct: 74  PKMRWYFKEHGWPSSNLFEKPPEDDESRAKLIDTLQDWKTERYKEIIKSGTVEPRPGVLR 133

Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
           LMDEAK AGKK+AVCSAATKSSVILCLENLIGMERF+GLDCFLAGDDVK+KKPDPSIYVT
Sbjct: 134 LMDEAKTAGKKLAVCSAATKSSVILCLENLIGMERFQGLDCFLAGDDVKEKKPDPSIYVT 193

Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 289
           A+K LG+SE+DCLVVEDSVIGLQAAT AGM+CVITYT STA+Q
Sbjct: 194 ASKMLGVSERDCLVVEDSVIGLQAATTAGMSCVITYTPSTADQ 236

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
TAIR|locus:2140050	316	AT4G39970 [Arabidopsis thalian	0.845	0.797	0.763	8.6e-104
TAIR|locus:2101165	319	AT3G48420 [Arabidopsis thalian	0.788	0.736	0.387	7e-38
TIGR_CMR|GSU_1839	228	GSU_1839 "hydrolase, haloacid	0.385	0.504	0.367	5.1e-19
TIGR_CMR|BA_4427	221	BA_4427 "hydrolase, haloacid d	0.536	0.723	0.298	1.4e-18
UNIPROTKB|P77475	188	yqaB [Escherichia coli K-12 (t	0.362	0.574	0.318	6.6e-18
UNIPROTKB|Q9KN63	219	VC_A0102 "CbbY family protein"	0.379	0.515	0.333	1.3e-16
TIGR_CMR|VC_A0102	219	VC_A0102 "haloacid dehalogenas	0.379	0.515	0.333	1.3e-16
TAIR|locus:2010728	1055	AT1G56500 [Arabidopsis thalian	0.402	0.113	0.346	1.8e-13
TIGR_CMR|SO_0431	217	SO_0431 "HAD-superfamily hydro	0.419	0.576	0.316	2.9e-13
TIGR_CMR|DET_0395	456	DET_0395 "glycoprotease family	0.439	0.287	0.338	4e-13

TAIR|locus:2140050 AT4G39970 [Arabidopsis thaliana (taxid:3702)]

 Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
 Identities = 197/258 (76%), Positives = 228/258 (88%)

Query:    33 PIFHTNALRFKSNKKPLSLSLTRKALRVSASS-QSLQALIFDCDGVIIESEHLHRQAYND 91
             P F T  LRFKS       S +R +  VSA   +SL+ALIFDCDGVI+ESE+LHRQAYND
Sbjct:    33 PRFQT--LRFKSRSV---YSKSRVSSPVSALPLRSLEALIFDCDGVILESENLHRQAYND 87

Query:    92 AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
             AFSHF+VRC PSS +SL+W  EFYD  QN +GGGKPKMRWYFKE+GWP+STIFD+PP  D
Sbjct:    88 AFSHFDVRCPPSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSPPQND 147

Query:   152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
             DD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKSSVIL
Sbjct:   148 DDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVIL 207

Query:   212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 271
             CLENLI +ERF+GLDCFLAGDDVK+KKPDPSIY+TAA++LG+S KDCLVVEDSVIGLQAA
Sbjct:   208 CLENLIDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKLGVSVKDCLVVEDSVIGLQAA 267

Query:   272 TRAGMACVITYTSSTAEQ 289
             T+AGM+CVITYTSST++Q
Sbjct:   268 TKAGMSCVITYTSSTSDQ 285

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 100/258 (38%), Positives = 149/258 (57%)

Query:    40 LRF--KSNK-KPLSLSLTRKALRVSASSQSL----QALIFDCDGVIIESEHL-HRQAYND 91
             LRF  KS + KP+    +R      ++S SL     AL+FDCDGV++++E   HR ++ND
Sbjct:    42 LRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFND 101

Query:    92 AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
              F   ++        ++ WD + Y  L  +IGGGK +M  YF + GWP     +  P  +
Sbjct:   102 TFKERDL--------NVTWDVDLYGELL-KIGGGKERMTAYFNKVGWP-----EKAPKDE 147

Query:   152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
              ++ + I  +   KTE +  +I+   +  RPGV +L+D+A   G KVAVCS + + +V  
Sbjct:   148 AERKEFIAGLHKQKTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSA 207

Query:   212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 271
              +  L+G ER E +  F AGD V +KKPDP+IY  AA+ LG+    C+VVEDS IGL AA
Sbjct:   208 IVSCLLGPERAEKIKIF-AGDVVPKKKPDPAIYNLAAETLGVDPSKCVVVEDSAIGLAAA 266

Query:   272 TRAGMACVITYTSSTAEQ 289
               AGM C++T +  TA++
Sbjct:   267 KAAGMTCIVTKSGYTADE 284

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TIGR_CMR|GSU_1839 GSU_1839 "hydrolase, haloacid dehalogenase-like family" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 174 (66.3 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
 Identities = 47/128 (36%), Positives = 69/128 (53%)

Query:   165 KTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224
             K   +Q+II SG V P PGV+ L+   KA    VA+CS A +S ++  LE L G+     
Sbjct:    76 KAAAFQEIIASG-VTPYPGVVELIRNIKA-NHPVALCSGALRSDILPILEGL-GLSGI-- 130

Query:   225 LDCFLAGDDVKQKKPDPSIYVTAAKRLG-------ISEKDCLVVEDSVIGLQAATRAGMA 277
              D  +  D+V   KPDP+ Y  A +RL        I  + C+ +ED+  G+ +AT AG+ 
Sbjct:   131 FDVMVTADEVSASKPDPASYALAVRRLTAAFPNRQIRPETCIAIEDTPAGIASATGAGIG 190

Query:   278 CVITYTSS 285
              V+  T+S
Sbjct:   191 -VLAVTNS 197

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

TIGR_CMR|BA_4427 BA_4427 "hydrolase, haloacid dehalogenase-like family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 177 (67.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
 Identities = 52/174 (29%), Positives = 91/174 (52%)

Query:   110 WDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD--NPPVTDD-DQAKLIDLIQDWKT 166
             W   F D ++ + GG  P +  + K  G     +++  N  + +  D+  L + +++   
Sbjct:    20 WFHSFRDAVR-EYGGDLP-LEEFAKCIGTTDDVLYEYLNEQLKEKFDKYALKEKVKNLHK 77

Query:   167 ERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226
             E+ +        E R GV   ++EAK  G K+A+ S++++  VI  LE L   + FE + 
Sbjct:    78 EKMK------IPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEELQIRDYFEVIK 131

Query:   227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280
                  +DV++ KPDP++Y  A + LGI   + +  EDS+ GL+AA  AG+ CV+
Sbjct:   132 ---TREDVEKVKPDPALYRVAIEDLGIDSSEAVAFEDSLNGLKAAIAAGLTCVV 182

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

UNIPROTKB|P77475 yqaB [Escherichia coli K-12 (taxid:83333)]

 Score = 146 (56.5 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
 Identities = 37/116 (31%), Positives = 61/116 (52%)

Query:   165 KTERYQQIIKSGTVEPRPGVLRLMDEAKA-AGKKVAVCSAATKSSVILCLENLIGMERFE 223
             KTE  + ++   +VEP P    L+D  K+  G++       ++S++   L   +G+  + 
Sbjct:    75 KTEAVRSMLLD-SVEPLP----LVDVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRHY- 128

Query:   224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
               D  +A D VK  KP P  ++  A+R+G+    C+V ED+  G+QAA  AGM  V
Sbjct:   129 -FDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGMDAV 183

GO:0008801 "beta-phosphoglucomutase activity" evidence=IDA

GO:0016791 "phosphatase activity" evidence=IDA

GO:0016311 "dephosphorylation" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

UNIPROTKB|Q9KN63 VC_A0102 "CbbY family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 165 (63.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 39/117 (33%), Positives = 64/117 (54%)

Query:   160 LIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219
             L  +W+ +RY  ++    +  + GV+ L++  KA    VAV ++  K   ++ L+ L G+
Sbjct:    70 LHNEWR-QRYNAVVMHEAIPHKDGVIALLEWLKARSIPVAVATSTQKEVALIKLQ-LAGL 127

Query:   220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 276
             + +        G +V Q KP P IY+ AA+RLG+  + CL  EDS  G++AA  A M
Sbjct:   128 DHY--FANITTGCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMAAQM 182

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

TIGR_CMR|VC_A0102 VC_A0102 "haloacid dehalogenase/epoxide hydrolase family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 165 (63.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 39/117 (33%), Positives = 64/117 (54%)

Query:   160 LIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219
             L  +W+ +RY  ++    +  + GV+ L++  KA    VAV ++  K   ++ L+ L G+
Sbjct:    70 LHNEWR-QRYNAVVMHEAIPHKDGVIALLEWLKARSIPVAVATSTQKEVALIKLQ-LAGL 127

Query:   220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 276
             + +        G +V Q KP P IY+ AA+RLG+  + CL  EDS  G++AA  A M
Sbjct:   128 DHY--FANITTGCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMAAQM 182

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

TAIR|locus:2010728 AT1G56500 [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
 Identities = 44/127 (34%), Positives = 66/127 (51%)

Query:   163 DWKTERYQQIIKSGTVEPR-----PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI 217
             D   ER+ +I      +P      PG L L+ E K  G KVAV S+A +  V   L+   
Sbjct:   139 DAAKERFFEIYLDKYAKPESGIGFPGALELVTECKNKGLKVAVASSADRIKVDANLK-AA 197

Query:   218 GMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 277
             G+      D  ++ D  +  KP P I++ AAK LG+   +C+V+ED++ G+QAA  A M 
Sbjct:   198 GLS-LTMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAAQAANMR 256

Query:   278 CVITYTS 284
             C+   T+
Sbjct:   257 CIAVKTT 263

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0009773 "photosynthetic electron transport in photosystem I" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

TIGR_CMR|SO_0431 SO_0431 "HAD-superfamily hydrolase, subfamily IA, variant 3 protein family" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 145 (56.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
 Identities = 44/139 (31%), Positives = 70/139 (50%)

Query:   144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSA 203
             +   P  D D AK+   I D   E   +I+++G  EP PGV + M   +A G K+ +   
Sbjct:    60 YHKAPWADYDNAKVSKTIVDKVAE---EILQTG--EPMPGVQQAMAYCQAKGLKIGL--- 111

Query:   204 ATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK---KPDPSIYVTAAKRLGISEKDCLV 260
             AT S  +L ++ ++   + +G   F+A +  +     KP P +Y+  A  LG+  + CL 
Sbjct:   112 ATSSPTVL-IDAVLARLKLKGQ--FMAVESAEALTYGKPHPEVYLNCATALGVDPRYCLA 168

Query:   261 VEDSVIGLQAATRAGMACV 279
             +EDS  G+ AA  A M  V
Sbjct:   169 IEDSFNGIIAARAANMQTV 187

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

TIGR_CMR|DET_0395 DET_0395 "glycoprotease family protein/hydrolase, beta-phosphoglucomutase family" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 172 (65.6 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
 Identities = 48/142 (33%), Positives = 79/142 (55%)

Query:   151 DDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI 210
             +   A  I  + D K   +++      ++  PGV+ L+   K AG ++A+ S+A  +++ 
Sbjct:   293 EKSDADTIHTLADRKEHLFREYAGQ-EIQLFPGVIELLKSLKTAGYRMAIASSAPLANIK 351

Query:   211 LCLENLIGMERFEGLDCFLAG---DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 267
             L +  L G+    G D FLA     DV + KP+P I++ +A RL  S ++CLV+ED+  G
Sbjct:   352 LVMTKL-GI----G-DYFLATVSEKDVTKGKPNPQIFLLSAARLCASPEECLVIEDAPAG 405

Query:   268 LQAATRAGMACVITYTSSTAEQ 289
             ++AA +AGM C I  T+S   Q
Sbjct:   406 VEAAKKAGMKC-IAVTNSQQPQ 426

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0006508 "proteolysis" evidence=ISS

GO:0008233 "peptidase activity" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	scaffold_700231.1	annotation not avaliable (314 aa)
		(Arabidopsis lyrata)
Predicted Functional Partners:
	Al_scaffold_0003_1112	annotation not avaliable (365 aa)			•	•			•		0.645
	fgenesh2_kg.6__3113__AT4G11570.1	annotation not avaliable (374 aa)			•				•		0.641
	fgenesh2_kg.8__1659__AT5G57440.1	annotation not avaliable (239 aa)			•				•		0.627
	fgenesh1_pg.C_scaffold_3002379	annotation not avaliable (497 aa)	•						•		0.494
	fgenesh1_pm.C_scaffold_4001112	annotation not avaliable (245 aa)				•			•		0.474
	scaffold_105623.1	annotation not avaliable (1058 aa)				•			•	•	0.460
	fgenesh2_kg.2__2421__AT1G79790.1	annotation not avaliable (240 aa)				•			•		0.452
	scaffold_604018.1	annotation not avaliable (215 aa)				•					0.450
	fgenesh2_kg.1__3345__AT1G32080.1	annotation not avaliable (506 aa)				•					0.450
	fgenesh2_kg.1__1751__AT1G15980.1	annotation not avaliable (460 aa)				•					0.438

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	298
PLN02779	286	PLN02779, PLN02779, haloacid dehalogenase-like hyd	1e-136
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	1e-39
TIGR02009	185	TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f	2e-29
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	8e-23
TIGR01990	185	TIGR01990, bPGM, beta-phosphoglucomutase	1e-22
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	3e-21
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	7e-20
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	9e-20
PRK10725	188	PRK10725, PRK10725, fructose-1-P/6-phosphogluconat	4e-18
PLN02919	1057	PLN02919, PLN02919, haloacid dehalogenase-like hyd	2e-15
PRK10826	222	PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase;	2e-14
TIGR01449	213	TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas	2e-14
PLN02940	382	PLN02940, PLN02940, riboflavin kinase	8e-13
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	5e-12
PRK10563	221	PRK10563, PRK10563, 6-phosphogluconate phosphatase	9e-12
PRK13222	226	PRK13222, PRK13222, phosphoglycolate phosphatase;	1e-11
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	2e-11
PLN03243	260	PLN03243, PLN03243, haloacid dehalogenase-like hyd	3e-09
PLN02811	220	PLN02811, PLN02811, hydrolase	1e-08
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	2e-08
TIGR01549	162	TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup	4e-08
PLN02770	248	PLN02770, PLN02770, haloacid dehalogenase-like hyd	2e-07
TIGR01454	205	TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic	2e-07
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	6e-07
PRK11587	218	PRK11587, PRK11587, putative phosphatase; Provisio	1e-06
PRK13288	214	PRK13288, PRK13288, pyrophosphatase PpaX; Provisio	2e-06
TIGR03351	220	TIGR03351, PhnX-like, phosphonatase-like hydrolase	5e-06
PRK13226	229	PRK13226, PRK13226, phosphoglycolate phosphatase;	1e-05
PLN02575	381	PLN02575, PLN02575, haloacid dehalogenase-like hyd	3e-05
TIGR01422	253	TIGR01422, phosphonatase, phosphonoacetaldehyde hy	3e-05
PRK13223	272	PRK13223, PRK13223, phosphoglycolate phosphatase;	4e-05
TIGR01548	197	TIGR01548, HAD-SF-IA-hyp1, haloacid dehalogenase s	3e-04
PRK13478	267	PRK13478, PRK13478, phosphonoacetaldehyde hydrolas	6e-04
COG2179	175	COG2179, COG2179, Predicted hydrolase of the HAD s	0.001
TIGR01428	198	TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalo	0.001
TIGR01662	132	TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase,	0.001
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	0.003
TIGR01993	183	TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti	0.004

>gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein

 Score =  387 bits (996), Expect = e-136
 Identities = 122/260 (46%), Positives = 167/260 (64%), Gaps = 15/260 (5%)

Query: 35  FHTNALRFKSNKKPLSLSLTRKALRV----SASSQSLQALIFDCDGVIIESE-HLHRQAY 89
             +  L   S  +       R         +++S   +AL+FDCDGV++E+E   HR A+
Sbjct: 4   SSSARLASASRTRAGRRRRRRSRSTARVASASASALPEALLFDCDGVLVETERDGHRVAF 63

Query: 90  NDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPV 149
           NDAF  F +R        + WD E YD L N IGGGK +M WYF E+GWP+STI +  P 
Sbjct: 64  NDAFKEFGLR-------PVEWDVELYDELLN-IGGGKERMTWYFNENGWPTSTI-EKAPK 114

Query: 150 TDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV 209
            ++++ +L+D + D KTE ++++I+SG +  RPGVLRLMDEA AAG KVAVCS + + +V
Sbjct: 115 DEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAV 174

Query: 210 ILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQ 269
              +  L+G ER +GLD F AGDDV +KKPDP IY  AA+ LG+    C+VVEDSVIGLQ
Sbjct: 175 SKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQ 233

Query: 270 AATRAGMACVITYTSSTAEQ 289
           AA  AGM C++T +S TA++
Sbjct: 234 AAKAAGMRCIVTKSSYTADE 253

Length = 286

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score =  137 bits (348), Expect = 1e-39
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 33/215 (15%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           ++A+IFD DG +++SE LH +A+ +A   + +                 + ++   GGG 
Sbjct: 2   IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISD-------------EEIRELHGGGI 48

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK-SGTVEPRPGVL 185
            +                       D            +   Y+        ++P PGV+
Sbjct: 49  AR--------IIDLLRKLAAGEDPADLAEL--------ERLLYEAEALELEGLKPIPGVV 92

Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
            L+++ KA G  +AV S++ + +    L  L G+  +   D  +  DDV + KP P IY+
Sbjct: 93  ELLEQLKARGIPLAVASSSPRRAAERVLARL-GLLDY--FDVIVTADDVARGKPAPDIYL 149

Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280
            AA+RLG+  ++C+VVEDS  G+QAA  AGM  V 
Sbjct: 150 LAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184

Length = 221

>gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase

 Score =  110 bits (277), Expect = 2e-29
 Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 36/216 (16%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
            +A+IFD DGVI ++  LH QA+    + + +  D    +SL                G 
Sbjct: 1   YKAVIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYNESL---------------KGL 45

Query: 127 PKM---RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
            +    R   K  G   S             A+        K E Y+++++   V   PG
Sbjct: 46  SREDILRAILKLRGDGLS------LEEIHQLAER-------KNELYRELLRLTGVAVLPG 92

Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
           +  L+   KA G  V + S++  +  IL    L   + F   D  +   +VK  KP P  
Sbjct: 93  IRNLLKRLKAKGIAVGLGSSSKNAPRILAKLGLR--DYF---DAIVDASEVKNGKPHPET 147

Query: 244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           ++ AA+ LG+   +C+V ED++ G+QAA  AGM  V
Sbjct: 148 FLLAAELLGVPPNECIVFEDALAGVQAARAAGMFAV 183

This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 93.7 bits (233), Expect = 8e-23
 Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 31/232 (13%)

Query: 65  QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
             ++A++FD DG +++S     +A+N A +                 P   + ++  IG 
Sbjct: 2   MMIKAILFDLDGTLVDSAEDILRAFNAALAELG------------LPPLDEEEIRQLIGL 49

Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
           G  ++             I       D++ A   +L++  + E      +       PGV
Sbjct: 50  GLDEL-------------IERLLGEADEEAA--AELVERLREEFLTAYAELLESRLFPGV 94

Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
             L+   K+AG K+ + +   +  + + L+ L   + F   D  + GDDV   KPDP   
Sbjct: 95  KELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDVPPPKPDPEPL 151

Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVRIIDP 295
           +   ++LG+  ++ L+V DS+  + AA  AG+  V +T+  ++ E++     
Sbjct: 152 LLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGA 203

Length = 220

>gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase

 Score = 92.4 bits (230), Expect = 1e-22
 Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 37/215 (17%)

Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
           A+IFD DGVI ++   H  A+             + +  + +D EF + L+   G  + +
Sbjct: 1   AVIFDLDGVITDTAEYHYLAWKHL----------ADELGIPFDEEFNESLK---GVSREE 47

Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP-RPGVLRL 187
                 + G            +++++ +L +     K + Y +++K  T     PG+  L
Sbjct: 48  SLERILDLG--------GKKYSEEEKEELAER----KNDYYVELLKELTPADVLPGIKSL 95

Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA---GDDVKQKKPDPSIY 244
           + + K    K+A+ SA+  +  IL        E+ E +D F A     ++K+ KPDP I+
Sbjct: 96  LADLKKNNIKIALASASKNAPTIL--------EKLELIDYFDAIVDPAELKKGKPDPEIF 147

Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           + AA+ LG+S  +C+ +ED+  G++A   AGM  V
Sbjct: 148 LAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAV 182

This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 88.2 bits (219), Expect = 3e-21
 Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 36/211 (17%)

Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
           A++FD DGV++++ H   +  + A            +  +         L+  +      
Sbjct: 1   AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPD-----ELGV----SEVGSLELAL------ 45

Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
            RW  K              ++ +D   L   +       Y+ + K G   P PGV  L+
Sbjct: 46  RRWKAKYGR----------TMSAEDAQLLYKQLF------YEALEKEGLK-PLPGVRALL 88

Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
           +  +A GKK+A+ + + ++   L LE  +G+      D  +   DV   KPDP IY+ A 
Sbjct: 89  EALRARGKKLALLTNSPRADAKLVLE--LGLRAL--FDVVIDSSDVGLGKPDPDIYLQAL 144

Query: 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           K+LG+   +CL V+DS  G+ AA  AGM  V
Sbjct: 145 KKLGLKPSECLFVDDSPAGIDAAKAAGMHTV 175

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 84.3 bits (209), Expect = 7e-20
 Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 38/211 (18%)

Query: 70  LIFDCDGVIIESEHLHRQAYND-AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
           +IFD DG +I+ + +  +A  D A     +            D    ++ +    GG P 
Sbjct: 1   IIFDLDGTLIDFDPVIFEALRDLAAERLGL------------DISAEELREA---GGLPF 45

Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
                       + +    P+             D   E   +      +EP P V+ L+
Sbjct: 46  DEAL--------ADLLREHPID-----------PDEILEALLEYNLESRLEPFPDVVELL 86

Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
              KA G K+ + S  ++ +V   LE L  ++ F   D     DDV  +KPDP  Y    
Sbjct: 87  RRLKAKGVKLVILSNGSREAVERLLEKLGLLDLF---DAVFTSDDVGARKPDPEAYERVL 143

Query: 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           +RLG+  ++ L ++DS   L+AA  AG+  V
Sbjct: 144 ERLGLPPEEILFIDDSPEDLEAARAAGIKTV 174

Length = 176

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 84.6 bits (209), Expect = 9e-20
 Identities = 48/209 (22%), Positives = 76/209 (36%), Gaps = 26/209 (12%)

Query: 69  ALIFDCDGVIIESEHLH--RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           A++FD DG + + E +    +A  +A +   V          N   E  + L  ++    
Sbjct: 3   AVVFDLDGTLTDGEPVVPEAEALLEAAAALGV--AIVIAAGENLTKEGREELVRRLLLRA 60

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
                  +E     +T+     V D     LI L                T    PG   
Sbjct: 61  LAGEELLEELLRAGATVVA---VLDLVVLGLIAL----------------TDPLYPGARE 101

Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
            + E K AG K+A+ +   + +       L     F+ L        V   KPDP I+  
Sbjct: 102 ALKELKEAGIKLAILTGDNRLTANAIARLLGL---FDALVSADLYGLVGVGKPDPKIFEL 158

Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAG 275
           A + LG+  ++ L+V D V  + AA  AG
Sbjct: 159 ALEELGVKPEEVLMVGDGVNDIPAAKAAG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional

 Score = 80.1 bits (198), Expect = 4e-18
 Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 40/215 (18%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
             LIFD DG I+++E  HR+A+ +    + ++ D  +  +LN               G P
Sbjct: 6   AGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALN---------------GSP 50

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLID--LIQDWKTERYQQIIKSGTVEPRPGVL 185
              W   +             + + +QA L D   +   KTE  + ++   +VEP P   
Sbjct: 51  T--WRIAQ------------AIIELNQADL-DPHALAREKTEAVKSMLLD-SVEPLP--- 91

Query: 186 RLMDEAKA-AGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
            L++  KA  G++       ++S++   L   +G+ R+   D  +A DDV+  KP P  +
Sbjct: 92  -LIEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRY--FDAVVAADDVQHHKPAPDTF 148

Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           +  A+ +G+    C+V ED+  G+QAA  AGM  V
Sbjct: 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAV 183

Length = 188

>gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein

 Score = 76.4 bits (188), Expect = 2e-15
 Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 60/309 (19%)

Query: 2   ASTVILSQTATLSSSSSSTTTTAKFSSLTHNPIFHTNALRFKS-----NKKPLSLSLTRK 56
            S            + +  ++     S +   +      R KS      K   +   T +
Sbjct: 12  FSWPRRHCAGDFPPALAFASSIRGRRSRSGVWLGKNGGARSKSCAKVEEKSRGAEIATEE 71

Query: 57  ALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYD 116
             +VSA       ++FD DGV+  SE   R+A  D F+   V          ++ P F  
Sbjct: 72  WGKVSA-------VLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVE-----DFVP-FMG 118

Query: 117 VLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSG 176
             +    GG   ++                    D D AK          +R+ +I    
Sbjct: 119 TGEANFLGGVASVK---------------GVKGFDPDAAK----------KRFFEIYLEK 153

Query: 177 TVEPR-----PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-----D 226
             +P      PG L L+ + K  G KVAV S+A +  V     NL       GL     D
Sbjct: 154 YAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVD---ANLAA----AGLPLSMFD 206

Query: 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286
             ++ D  +  KP P I++ AAK LG+   +C+V+ED++ G+QAA  AGM C+   T+ +
Sbjct: 207 AIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLS 266

Query: 287 AEQVRIIDP 295
            E ++   P
Sbjct: 267 EEILKDAGP 275

Length = 1057

>gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 50/225 (22%)

Query: 62  ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
           ++ + + A IFD DG++I+SE L  +A  D  +            SL  D    + L + 
Sbjct: 2   STPRQILAAIFDMDGLLIDSEPLWDRAELDVMA------------SLGVDISRREELPDT 49

Query: 122 IGGGKPKMR-------WYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK 174
           +G     +R       WY +   W          V     A++I LI++           
Sbjct: 50  LG-----LRIDQVVDLWYAR-QPWNG---PSRQEVVQRIIARVISLIEE----------- 89

Query: 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA---G 231
             T    PGV   +   KA G K+ + SA    S +  LE ++ M  F+  D F A    
Sbjct: 90  --TRPLLPGVREALALCKAQGLKIGLASA----SPLHMLEAVLTM--FDLRDYFDALASA 141

Query: 232 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 276
           + +   KP P +Y+  A +LG+    C+ +EDS  G+ AA  A M
Sbjct: 142 EKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARM 186

Length = 222

>gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic

 Score = 70.2 bits (172), Expect = 2e-14
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 168 RYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC 227
            Y+++    T    PGV   +   +A G ++ + +          LE L   + F  L  
Sbjct: 75  HYEEVAGELT-SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVL-- 131

Query: 228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM-ACVITY 282
            + GD + Q+KP P   + AA+RLG++ +  + V DS + +QAA  AG  + ++TY
Sbjct: 132 -IGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTY 186

PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213

>gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase

 Score = 67.6 bits (165), Expect = 8e-13
 Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 2/102 (1%)

Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK 237
           ++  PG  RL+   K+ G  +A+ S + ++++   +    G +  E     + GD+V++ 
Sbjct: 92  IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK--ESFSVIVGGDEVEKG 149

Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           KP P I++ AAKRL +   +CLV+EDS+ G+ A   AGM  +
Sbjct: 150 KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVI 191

Length = 382

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 63.8 bits (155), Expect = 5e-12
 Identities = 42/236 (17%), Positives = 78/236 (33%), Gaps = 29/236 (12%)

Query: 65  QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSL-NWDPEFYDVLQNQIG 123
             ++A++FD DG +++ +    +A    F+   V         L   +      L+ +  
Sbjct: 2   MMIKAILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGE-- 59

Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
                   Y  E+G     + +       D  +  +L+++      + +         P 
Sbjct: 60  --------YTGEYGLTLERLLELLERLLGD--EDAELVEELLAALAKLL------PDYPE 103

Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
            L  + E     K   + +   +      L  L  ++ F   D     +DV   KPDP I
Sbjct: 104 ALEALKELGKKYKLGIL-TNGARPHQERKLRQLGLLDYF---DAVFISEDVGVAKPDPEI 159

Query: 244 YVTAAKRLGISEKDCLVVEDS---VIGLQAATRAGM-ACVITYTSSTAEQVRIIDP 295
           +  A ++LG+  ++ L V DS    I    A   GM    I               
Sbjct: 160 FEYALEKLGVPPEEALFVGDSLENDI--LGARALGMKTVWINRGGKPLPDALEAPD 213

Length = 229

>gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional

 Score = 62.8 bits (153), Expect = 9e-12
 Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 45/217 (20%)

Query: 66  SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
            ++A+ FDCDG +++SE +  +AY   F+ F +                 +V +   G  
Sbjct: 3   QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLE------------EVFKRFKG-- 48

Query: 126 KPKMRWY------FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVE 179
              ++ Y       KEHG  +    +  PV   + A+L D                  +E
Sbjct: 49  ---VKLYEIIDIISKEHGV-TLAKAELEPVYRAEVARLFDS----------------ELE 88

Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKP 239
           P  G   L++        + V S    S +   L    GM  +   D   +G D+++ KP
Sbjct: 89  PIAGANALLESITVP---MCVVSNGPVSKMQHSL-GKTGMLHYFP-DKLFSGYDIQRWKP 143

Query: 240 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 276
           DP++   AA+ + ++ ++C++V+DS  G Q+   AGM
Sbjct: 144 DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGM 180

Length = 221

>gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional

 Score = 62.9 bits (154), Expect = 1e-11
 Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 47/228 (20%)

Query: 65  QSLQALIFDCDGVIIES-EHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEF-YDVLQNQI 122
             ++A+ FD DG +++S   L   A N A +   +             P    + ++  +
Sbjct: 4   MDIRAVAFDLDGTLVDSAPDLAA-AVNAALAALGL-------------PPAGEERVRTWV 49

Query: 123 GGGKPKM-----RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGT 177
           G G   +      W  +E               ++   KL +L        Y + +  G+
Sbjct: 50  GNGADVLVERALTWAGRE-------------PDEELLEKLRELFD----RHYAENVAGGS 92

Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCS-AATKSSVILCLENLIGM-ERFEGLDCFLAGDDVK 235
               PGV   +   KAAG  +AV +   T     L LE L G+ + F  +   + GD + 
Sbjct: 93  R-LYPGVKETLAALKAAGYPLAVVTNKPTPFVAPL-LEAL-GIADYFSVV---IGGDSLP 146

Query: 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI-TY 282
            KKPDP+  + A ++LG+  ++ L V DS   +QAA  AG   V  TY
Sbjct: 147 NKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTY 194

Length = 226

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 13/121 (10%)

Query: 172 IIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL------ 225
           I +   +E  PGV   + E K  G K+A+ +  ++  V+  LE L   + F+ +      
Sbjct: 17  IAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGA 76

Query: 226 -------DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 278
                    FL G      KP+P   + A K LG+  ++ L+V DS+  ++ A  AG   
Sbjct: 77  AIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLG 136

Query: 279 V 279
           V
Sbjct: 137 V 137

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional

 Score = 56.2 bits (135), Expect = 3e-09
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 3/115 (2%)

Query: 165 KTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224
           + E   + ++ G    RPG    +   K     +AV S   +  +   +E  +GME F  
Sbjct: 95  RKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIE-AVGMEGF-- 151

Query: 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
               LA +DV + KPDP +++ AA+RLG   + C+V  +S   ++AA    M CV
Sbjct: 152 FSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCV 206

Length = 260

>gnl|CDD|178407 PLN02811, PLN02811, hydrolase

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 7/104 (6%)

Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD--VKQKKP 239
           PG  RL+    A G  +A+ + + K    L  +     E F  +   + GDD  VKQ KP
Sbjct: 81  PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQR--HGELFSLMHHVVTGDDPEVKQGKP 138

Query: 240 DPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAGMACVI 280
            P I++ AA+R     +     LV ED+  G++AA  AGM+ V+
Sbjct: 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182

Length = 220

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 16/52 (30%), Positives = 30/52 (57%)

Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 289
           KP+P +   A +RLG+  ++C+++ DS   + AA  AG+  ++  T  T  +
Sbjct: 4   KPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAE 55

Length = 74

>gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

 Score = 51.6 bits (124), Expect = 4e-08
 Identities = 38/217 (17%), Positives = 65/217 (29%), Gaps = 65/217 (29%)

Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRC--------DPSSQQSLNW--DPEFYDVL 118
           A++FD DG +++ +   R+A+   F  F +               + L W    E  + L
Sbjct: 1   AILFDIDGTLVDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIATEALEEL 60

Query: 119 QNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV 178
           Q  IG    +                              DL+   K    +  I S   
Sbjct: 61  QGHIGYDAEEAYIPG-----------------------AADLLPRLKEAGIKLGIISNGS 97

Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKK 238
                                             L    G+  +      + G D    K
Sbjct: 98  LRA----------------------------QKLLLRKHGLGDYFE---LILGSDEIGSK 126

Query: 239 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 275
           P+P I++ A + LG+   + L V D++  ++ A  AG
Sbjct: 127 PEPEIFLAALESLGVPP-EVLHVGDNLSDIKGARNAG 162

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162

>gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 37/217 (17%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG--G 124
           L+A++FD DG + +S+ LH  A                         F ++LQ +I   G
Sbjct: 22  LEAVLFDVDGTLCDSDPLHYYA-------------------------FREMLQ-EINFNG 55

Query: 125 GKPKMRWYFKEH--GWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
           G P    +F E+  G  +  I     +  DD  + +    D K   ++++     ++P  
Sbjct: 56  GVPITEEFFVENIAGKHNEDIALG--LFPDDLERGLKFTDD-KEALFRKLASE-QLKPLN 111

Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
           G+ +L    +  G K A  + A + +  L + +L+G+  F      + G + +  KP P 
Sbjct: 112 GLYKLKKWIEDRGLKRAAVTNAPRENAELMI-SLLGLSDF--FQAVIIGSECEHAKPHPD 168

Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            Y+ A + L +S+    V EDSV G++A   AGM  V
Sbjct: 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVV 205

Length = 248

>gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 50/216 (23%)

Query: 70  LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
           ++FD DGV+++S  + R+A+  A+                            +G G    
Sbjct: 1   VVFDLDGVLVDSFAVMREAFAIAYREV-------------------------VGDGPAPF 35

Query: 130 RWYFKEHG--WPSSTIFDNPPVTDDDQAKLIDLIQDWKT----ERYQQIIKSGTVEPRPG 183
             Y +  G  +P             D  +++ L  + +     E Y+    +G VE  PG
Sbjct: 36  EEYRRHLGRYFP-------------DIMRIMGLPLEMEEPFVRESYRL---AGEVEVFPG 79

Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
           V  L+ E +A G   A+ +  +       LE L G+      D  +  D+V + KP P I
Sbjct: 80  VPELLAELRADGVGTAIATGKSGPRARSLLEAL-GLLPL--FDHVIGSDEVPRPKPAPDI 136

Query: 244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
              A + L +  +D ++V D+V  L +A  AG A V
Sbjct: 137 VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATV 172

The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 48.9 bits (117), Expect = 6e-07
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 5/119 (4%)

Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKP 239
             PGV   + E + +G ++ + +          LE L G+  F   D  +  ++   +KP
Sbjct: 95  VYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL-GVRDF--FDAVITSEEEGVEKP 151

Query: 240 DPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACV-ITYTSSTAEQVRIIDPC 296
            P I+  A KRLG+  ++ ++V D +   ++ A   GM  V I    S+  +  +    
Sbjct: 152 HPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYP 210

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 18/48 (37%), Positives = 32/48 (66%)

Query: 228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 275
           F+  + VK+ KP+P  Y+  A+ LG++ ++C+VVED+  G+ +   AG
Sbjct: 128 FVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAG 175

Length = 218

>gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 10/157 (6%)

Query: 144 FDNPPVTDD----DQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVA 199
           F  P + D     D++K+ ++I  ++   ++       V     V   +   K  G K+ 
Sbjct: 45  FIGPSLHDTFSKIDESKVEEMITTYREFNHEH--HDELVTEYETVYETLKTLKKQGYKLG 102

Query: 200 VCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL 259
           + +   + +V + L+ L G++ F   D  +  DDV+  KPDP   + A + LG   ++ L
Sbjct: 103 IVTTKMRDTVEMGLK-LTGLDEF--FDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL 159

Query: 260 VVEDSVIGLQAATRAGM-ACVITYTSSTAEQVRIIDP 295
           +V D+   + A   AG     + +T    E +    P
Sbjct: 160 MVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKP 196

Length = 214

>gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 5/144 (3%)

Query: 151 DDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI 210
             D+A+      D++ ER  +    G     PG        +++G KVA+ +   + +  
Sbjct: 60  GADEAEAQAAFADFE-ERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAE 118

Query: 211 LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGI-SEKDCLVVEDSVIGLQ 269
             LE L G    + +D  +   DV   +P P + + A +  G+   +   V  D+   L+
Sbjct: 119 RLLEKL-GWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLE 177

Query: 270 AATRAG--MACVITYTSSTAEQVR 291
           A   AG      +   +  AE++ 
Sbjct: 178 AGINAGAGAVVGVLTGAHDAEELS 201

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220

>gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 19/51 (37%), Positives = 30/51 (58%)

Query: 229 LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           + GD + ++KP P   + AA+R+G++  DC+ V D    + AA  AGM  V
Sbjct: 142 IGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSV 192

Length = 229

>gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 213 LENLIGMERFEG-LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 271
           LEN IG     G     +A +DV + KPDP +++ AA+ L    + C+V  +S   ++AA
Sbjct: 246 LENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAA 305

Query: 272 TRAGMACV 279
             A M CV
Sbjct: 306 HDARMKCV 313

Length = 381

>gnl|CDD|188140 TIGR01422, phosphonatase, phosphonoacetaldehyde hydrolase

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 12/125 (9%)

Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--DCFLAGDDVKQ 236
            P PG + ++   +A G K+   +  T+      ++ +      +G   D  +  DDV  
Sbjct: 99  SPIPGAIEVIAYLRARGIKIGSTTGYTRE----MMDVVAPEAAAQGYRPDYNVTADDVPA 154

Query: 237 KKPDPSIYVTAAKRLGISEKD-CLVVEDSVIGLQAATRAGMACVITYTSS-----TAEQV 290
            +P P + +  A  LG+ +    + V D+V  ++    AGM  V    SS     + E+ 
Sbjct: 155 GRPAPWMALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGVILSSNELGLSEEEY 214

Query: 291 RIIDP 295
           R + P
Sbjct: 215 RALPP 219

This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent [Central intermediary metabolism, Other]. Length = 253

>gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional

 Score = 44.1 bits (104), Expect = 4e-05
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 229 LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITY 282
           + GD + QKKPDP+  +   K  G+     L V DS   + AA  AG+ CV ++Y
Sbjct: 148 IGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSY 202

Length = 272

>gnl|CDD|233462 TIGR01548, HAD-SF-IA-hyp1, haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 44/225 (19%), Positives = 74/225 (32%), Gaps = 46/225 (20%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHF-NVRCDPSSQQSL----NWDPEF-------Y 115
           QAL+ D DGV+ +    +R+A  D   HF  V    +         N + ++        
Sbjct: 1   QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVV 60

Query: 116 DVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS 175
           D L +     + +                    VT   QA             Y+ +   
Sbjct: 61  DGLNSA-SSERVRDAP-------------TLEAVTAQFQALYQG------VGYYRDLATL 100

Query: 176 GTVEPRPGVL--RLMDEAKAAGKKVAVCSAATKSSVILCLE----NLIGMERFEGLDCFL 229
           G +E    +    L+ E   A K +AV +   +      L      ++   +    DC  
Sbjct: 101 GLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDC-- 158

Query: 230 AGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 274
                   KP+P   + AAK LG+      +V D+V  +    +A
Sbjct: 159 ------PPKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197

This model represents a small and phylogenetically curious clade of sequences. Sequences are found from Halobacterium (an archaeon), Nostoc and Synechococcus (cyanobacteria) and Phytophthora (a stramenophile eukaryote). These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs. The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. Length = 197

>gnl|CDD|184075 PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional

 Score = 40.2 bits (95), Expect = 6e-04
 Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 12/125 (9%)

Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--DCFLAGDDVKQ 236
            P PGVL ++   +A G K+   +  T+      ++ ++ +   +G   D  +  DDV  
Sbjct: 101 TPIPGVLEVIAALRARGIKIGSTTGYTRE----MMDVVVPLAAAQGYRPDHVVTTDDVPA 156

Query: 237 KKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACV-ITYTSS----TAEQV 290
            +P P + +  A  LG+ +   C+ V+D+V G++    AGM  V +  + +    + E+ 
Sbjct: 157 GRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEY 216

Query: 291 RIIDP 295
           + +  
Sbjct: 217 QALSA 221

Length = 267

>gnl|CDD|225090 COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only]

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 13/102 (12%)

Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKK 238
           +  P +   + E K AG KV V S   +S V    E L       G+  F+     + KK
Sbjct: 46  DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL-------GVP-FIY----RAKK 93

Query: 239 PDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACV 279
           P    +  A K + +  ++ ++V D +   +    RAGM  +
Sbjct: 94  PFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTI 135

Length = 175

>gnl|CDD|130495 TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalogenase, type II

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGLDCFLAGDDVK 235
            + P P V   +   K  G ++A+ S  + + +   +++  G++  F+ +   L+ D V+
Sbjct: 90  RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA-GLDDPFDAV---LSADAVR 145

Query: 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 277
             KP P +Y  A + LG+   + L V  +   L  A + G  
Sbjct: 146 AYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187

Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. Length = 198

>gnl|CDD|233517 TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, subfamily IIIA

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 38/146 (26%)

Query: 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCS 202
             D P V D+D+  L   + D                     L    E K AG KV +  
Sbjct: 12  TDDVPYVDDEDERILYPEVPDA--------------------LA---ELKEAGYKVVI-- 46

Query: 203 AATKSSVILCLENLIG-MERF-EGLDCFLAGDDVKQ-----KKPDPSIYVTAAKRL-GIS 254
             T  S I   +   G + R  E L   +   D+       +KP P +++ A KR   I 
Sbjct: 47  -VTNQSGIGRGKFSSGRVARRLEELGVPI---DILYACPHCRKPKPGMFLEALKRFNEID 102

Query: 255 EKDCLVVEDSVI-GLQAATRAGMACV 279
            ++ + V D  +  LQAA RAG+A +
Sbjct: 103 PEESVYVGDQDLTDLQAAKRAGLAFI 128

This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class III subfamilies are characterized by the lack of any domains located between either between the first and second conserved catalytic motifs (as in the Class I subfamilies, TIGR01493, TIGR01509, TIGR01488 and TIGR01494) or between the second and third conserved catalytic motifs (as in the Class II subfamilies, TIGR01460 and TIGR01484) of the superfamily domain. The IIIA subfamily contains five major clades: histidinol-phosphatase (TIGR01261) and histidinol-phosphatase-related protein (TIGR00213) which together form a subfamily (TIGR01656), DNA 3'-phosphatase (TIGR01663, TIGR01664), YqeG (TIGR01668) and YrbI (TIGR01670). In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme [Unknown function, Enzymes of unknown specificity]. Length = 132

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score = 38.3 bits (90), Expect = 0.003
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 13/83 (15%)

Query: 208 SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 267
           ++   LE   G E        + G      KP P+IY  A ++LG+   + L+V D +  
Sbjct: 172 AIAALLEQATGREPT------VIG------KPSPAIYEAALEKLGLDRSEVLMVGDRLDT 219

Query: 268 -LQAATRAGMACVITYTSSTAEQ 289
            +  A  AG+  ++  T  ++ +
Sbjct: 220 DILGAKAAGLDTLLVLTGVSSAE 242

Length = 269

>gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 1/86 (1%)

Query: 195 GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254
           G+K  + +   ++     L  L   + F+G+ CF   +     KP P  Y  A +  G+ 
Sbjct: 98  GRK-IIFTNGDRAHARRALRRLGIEDCFDGIFCFDTANPDLLPKPSPQAYEKALREAGVD 156

Query: 255 EKDCLVVEDSVIGLQAATRAGMACVI 280
            +  +  +DS   + A    GM  V+
Sbjct: 157 PERAIFFDDSARNIAAGKALGMKTVL 182

This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	298
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	100.0
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	100.0
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.98
PRK13288	214	pyrophosphatase PpaX; Provisional	99.97
COG0546	220	Gph Predicted phosphatases [General function predi	99.97
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.97
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.97
PLN02575	381	haloacid dehalogenase-like hydrolase	99.97
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.97
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.97
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.97
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.97
PRK11587	218	putative phosphatase; Provisional	99.97
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.97
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.97
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.97
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.96
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.96
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.96
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.96
PLN02940	382	riboflavin kinase	99.96
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.96
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.96
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.96
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.96
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.96
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.96
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.96
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.95
PRK09449	224	dUMP phosphatase; Provisional	99.95
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.95
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.95
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.94
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.94
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.94
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.94
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.93
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.93
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.93
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.93
PLN02811	220	hydrolase	99.93
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.93
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.92
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.9
PHA02597	197	30.2 hypothetical protein; Provisional	99.89
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.89
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.88
PLN02954	224	phosphoserine phosphatase	99.88
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.87
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.87
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.86
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.85
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.84
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.84
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.83
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.83
PRK06769	173	hypothetical protein; Validated	99.83
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.82
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.82
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.82
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.79
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.77
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.76
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.76
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.75
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.74
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.74
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.73
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.72
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.72
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.71
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.7
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.7
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.7
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.69
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.69
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.69
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.66
PHA02530	300	pseT polynucleotide kinase; Provisional	99.66
PRK11590	211	hypothetical protein; Provisional	99.65
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.64
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.6
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.59
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.58
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.58
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.58
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.55
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.55
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.55
PLN02645	311	phosphoglycolate phosphatase	99.54
PRK10444	248	UMP phosphatase; Provisional	99.54
PRK08238	479	hypothetical protein; Validated	99.52
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.51
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.49
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.49
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.49
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.48
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	99.45
PTZ00445	219	p36-lilke protein; Provisional	99.43
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.38
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.37
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.36
PRK10513	270	sugar phosphate phosphatase; Provisional	99.35
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.35
COG4229	229	Predicted enolase-phosphatase [Energy production a	99.32
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	99.3
PLN02887	580	hydrolase family protein	99.3
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	99.29
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	99.28
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	99.28
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.27
PRK10976	266	putative hydrolase; Provisional	99.27
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.24
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	99.24
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	99.23
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	99.22
COG4359	220	Uncharacterized conserved protein [Function unknow	99.21
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.19
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	99.19
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	99.19
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	99.19
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	99.18
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	99.18
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	99.16
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	99.14
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	99.12
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	99.0
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	99.0
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	98.99
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	98.99
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.97
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.9
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.9
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	98.87
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	98.82
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	98.82
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.81
PLN02382	413	probable sucrose-phosphatase	98.76
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.75
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.75
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	98.72
PRK10671	834	copA copper exporting ATPase; Provisional	98.71
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	98.69
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	98.68
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.66
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	98.61
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.59
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	98.59
COG4996	164	Predicted phosphatase [General function prediction	98.58
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	98.57
COG4087	152	Soluble P-type ATPase [General function prediction	98.49
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	98.44
COG3700	237	AphA Acid phosphatase (class B) [General function	98.41
PLN02423	245	phosphomannomutase	98.4
PTZ00174	247	phosphomannomutase; Provisional	98.38
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	98.38
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	98.36
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	98.33
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	98.32
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	98.29
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	98.27
PRK14010	673	potassium-transporting ATPase subunit B; Provision	98.21
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	98.2
PRK01122	679	potassium-transporting ATPase subunit B; Provision	98.19
PLN02177	497	glycerol-3-phosphate acyltransferase	98.16
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.15
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	98.08
PLN02645	311	phosphoglycolate phosphatase	98.07
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	98.03
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	98.01
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	98.0
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.96
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	97.96
PRK15122	903	magnesium-transporting ATPase; Provisional	97.96
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	97.95
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.95
COG5663	194	Uncharacterized conserved protein [Function unknow	97.93
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	97.86
COG2503	274	Predicted secreted acid phosphatase [General funct	97.83
KOG3107	468	consensus Predicted haloacid dehalogenase-like hyd	97.79
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	97.76
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.67
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.6
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	97.57
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	97.54
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	97.45
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	97.44
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	97.39
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	97.37
PLN02580	384	trehalose-phosphatase	97.29
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	97.25
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	97.23
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	97.21
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	97.18
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	97.18
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	97.13
COG4030	315	Uncharacterized protein conserved in archaea [Func	97.04
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	96.94
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	96.82
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	96.73
PLN03190	1178	aminophospholipid translocase; Provisional	96.62
PF06437	408	ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0	96.59
KOG0206	1151	consensus P-type ATPase [General function predicti	96.56
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	96.45
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	96.38
KOG3128	298	consensus Uncharacterized conserved protein [Funct	96.34
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	96.33
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	96.28
PLN02499	498	glycerol-3-phosphate acyltransferase	96.17
PRK10444	248	UMP phosphatase; Provisional	96.07
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	95.83
PLN02151	354	trehalose-phosphatase	95.75
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	95.49
KOG1618	389	consensus Predicted phosphatase [General function	95.39
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	95.27
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	94.98
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	94.96
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	94.63
PLN03017	366	trehalose-phosphatase	94.44
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	94.35
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	94.22
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	94.1
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	92.45
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	92.16
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	91.5
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	91.39
KOG4549	144	consensus Magnesium-dependent phosphatase [General	91.02
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	90.96
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	90.55
PRK00994	277	F420-dependent methylenetetrahydromethanopterin de	90.18
PF05690	247	ThiG: Thiazole biosynthesis protein ThiG; InterPro	90.01
KOG2116	738	consensus Protein involved in plasmid maintenance/	89.85
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	89.36
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	88.38
PRK10513	270	sugar phosphate phosphatase; Provisional	88.14
cd00733	279	GlyRS_alpha_core Class II Glycyl-tRNA synthetase (	88.1
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	88.05
CHL00162	267	thiG thiamin biosynthesis protein G; Validated	87.75
TIGR00388	293	glyQ glycyl-tRNA synthetase, tetrameric type, alph	87.53
PRK09348	283	glyQ glycyl-tRNA synthetase subunit alpha; Validat	87.46
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	86.84
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	86.7
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	86.52
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	86.4
PRK01158	230	phosphoglycolate phosphatase; Provisional	86.32
cd04728	248	ThiG Thiazole synthase (ThiG) is the tetrameric en	85.28
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	85.12
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	85.0
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	84.61
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	84.56
PRK11840	326	bifunctional sulfur carrier protein/thiazole synth	84.32
PRK10976	266	putative hydrolase; Provisional	84.21
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	83.92
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	83.68
KOG0203	1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	83.49
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	83.31
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	82.89
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	82.73
COG0731	296	Fe-S oxidoreductases [Energy production and conver	82.66
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	82.37
COG0752	298	GlyQ Glycyl-tRNA synthetase, alpha subunit [Transl	80.58
PRK13762	322	tRNA-modifying enzyme; Provisional	80.4

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=100.00  E-value=2.4e-32  Score=232.50  Aligned_cols=218  Identities=54%  Similarity=0.940  Sum_probs=160.4

Q ss_pred             CcCCccEEEEecCCccccch-hHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCC
Q 022348           63 SSQSLQALIFDCDGVIIESE-HLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSS  141 (298)
Q Consensus        63 ~~~~~k~viFD~DGTL~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~  141 (298)
                      ....+++|||||||||+|+. ..+..+|.++++++|++...       +....+..+.. +|++...+..++...+++..
T Consensus        36 ~~~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~-------~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~  107 (286)
T PLN02779         36 ASALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVE-------WDVELYDELLN-IGGGKERMTWYFNENGWPTS  107 (286)
T ss_pred             cccCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCC-------CCHHHHHHHHc-cCCChHHHHHHHHHcCCCcc
Confidence            34468999999999999999 99999999999999884211       12233333333 77777667666665555432


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                      .+ ...+..++...+..+.+.+.+.+.|...+....+.++||+.++|+.|+++|++++|+||+....+...++.+.+...
T Consensus       108 ~~-~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~  186 (286)
T PLN02779        108 TI-EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPER  186 (286)
T ss_pred             cc-ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccc
Confidence            22 11112233334445555555666677665444568999999999999999999999999999988888887622232


Q ss_pred             ccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE-cCCCchhHh
Q 022348          222 FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT-YTSSTAEQV  290 (298)
Q Consensus       222 ~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~-~~~~~~~~~  290 (298)
                      +..|+.+ ++++++..||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|++ ++....+++
T Consensus       187 ~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l  255 (286)
T PLN02779        187 AQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDF  255 (286)
T ss_pred             cCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCcccccc
Confidence            3224555 7888888999999999999999999999999999999999999999999966 444444444

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=100.00  E-value=8.8e-31  Score=219.36  Aligned_cols=196  Identities=24%  Similarity=0.357  Sum_probs=152.7

Q ss_pred             CCccEEEEecCCccccch-hHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcc
Q 022348           65 QSLQALIFDCDGVIIESE-HLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI  143 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~  143 (298)
                      ..+|+|||||||||+|+. ..+.++|..+++++|+....            .+.+....|.+.......+...+.     
T Consensus        22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~------------~e~~~~~~G~~~~~~~~~l~~~~~-----   84 (260)
T PLN03243         22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPP------------AFLLKRAEGMKNEQAISEVLCWSR-----   84 (260)
T ss_pred             CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCH------------HHHHHHhcCCCHHHHHHHHhccCC-----
Confidence            379999999999999996 66778999999999986433            123344567666554433321110     


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                            ..+.    ...+.+.+...+... ......++||+.++|+.|+++|++++|+||+....+...++.+ ++..+ 
T Consensus        85 ------~~~~----~~~l~~~~~~~~~~~-~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~-gl~~~-  151 (260)
T PLN03243         85 ------DFLQ----MKRLAIRKEDLYEYM-QGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV-GMEGF-  151 (260)
T ss_pred             ------CHHH----HHHHHHHHHHHHHHH-HccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc-CCHhh-
Confidence                  1111    223333333434322 2345689999999999999999999999999999999999998 99988 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhh
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR  291 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~  291 (298)
                       |+.+++++++...||+|++|..+++++|+.|++|+||||+..|+++|+++|+.+|++++......+.
T Consensus       152 -Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~  218 (260)
T PLN03243        152 -FSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELS  218 (260)
T ss_pred             -CcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhc
Confidence             9999999999999999999999999999999999999999999999999999999888765555443

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.98  E-value=1.3e-30  Score=218.16  Aligned_cols=202  Identities=24%  Similarity=0.373  Sum_probs=150.9

Q ss_pred             CCcCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCC
Q 022348           62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSS  141 (298)
Q Consensus        62 ~~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~  141 (298)
                      ....++++|+|||||||+|+...+..+|.++++++|.....      ......  ......|.+.......+...     
T Consensus        17 ~~~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~------~~~~~~--~~~~~~G~~~~~~~~~~~~~-----   83 (248)
T PLN02770         17 SGLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGV------PITEEF--FVENIAGKHNEDIALGLFPD-----   83 (248)
T ss_pred             cccCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCC------CCCHHH--HHHHcCCCCHHHHHHHHcCc-----
Confidence            34557999999999999999999999999999998754211      001111  12223455444332221100     


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                              ..+..    ..+...+...|..... ....++||+.++|+.|+++|++++|+||+....++..++.+ ++..
T Consensus        84 --------~~~~~----~~~~~~~~~~y~~~~~-~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~-gl~~  149 (248)
T PLN02770         84 --------DLERG----LKFTDDKEALFRKLAS-EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL-GLSD  149 (248)
T ss_pred             --------chhhH----HHHHHHHHHHHHHHHH-hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc-CChh
Confidence                    00111    1122233344444432 34689999999999999999999999999999999999998 9999


Q ss_pred             ccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhhh
Q 022348          222 FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI  292 (298)
Q Consensus       222 ~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~  292 (298)
                      +  ||.++++++++.+||+|++|..+++++|++|++|++|||+..|+++|+++|+.+|++..+...+++..
T Consensus       150 ~--Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~  218 (248)
T PLN02770        150 F--FQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLME  218 (248)
T ss_pred             h--CcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhh
Confidence            8  99999999999999999999999999999999999999999999999999999997754445555544

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.97  E-value=2.7e-30  Score=211.99  Aligned_cols=192  Identities=19%  Similarity=0.276  Sum_probs=149.0

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcccC
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD  145 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~  145 (298)
                      ++++|+||+||||+|+...+.++|.+++++++.....            .+++...+|.+..+..   ...+        
T Consensus         2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~------------~~~~~~~~G~~~~~~~---~~~~--------   58 (214)
T PRK13288          2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYK------------REDVLPFIGPSLHDTF---SKID--------   58 (214)
T ss_pred             CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCC------------HHHHHHHhCcCHHHHH---HhcC--------
Confidence            6899999999999999999999999999998754322            1234445565543322   2111        


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL  225 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f  225 (298)
                           ....    +.+...+.+.+.... .....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+  |
T Consensus        59 -----~~~~----~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~-gl~~~--f  125 (214)
T PRK13288         59 -----ESKV----EEMITTYREFNHEHH-DELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT-GLDEF--F  125 (214)
T ss_pred             -----HHHH----HHHHHHHHHHHHHhh-hhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CChhc--e
Confidence                 1112    222222333333221 234579999999999999999999999999999999999998 99988  9


Q ss_pred             ceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE-cCCCchhHhhhc
Q 022348          226 DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT-YTSSTAEQVRII  293 (298)
Q Consensus       226 d~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~-~~~~~~~~~~~~  293 (298)
                      +.++++++....||+|++|..+++++|++|++|++|||+.+|+++|+++|+.++++ |+.....++.+.
T Consensus       126 ~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~  194 (214)
T PRK13288        126 DVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQY  194 (214)
T ss_pred             eEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhc
Confidence            99999999999999999999999999999999999999999999999999999955 665666655543

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.97  E-value=7e-30  Score=209.90  Aligned_cols=200  Identities=24%  Similarity=0.431  Sum_probs=158.7

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      +++++|+||+||||+|+...+..+++.++++++.....            .+.+....|.+.......+....       
T Consensus         2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ig~~~~~~~~~~~~~~-------   62 (220)
T COG0546           2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLD------------EEEIRQLIGLGLDELIERLLGEA-------   62 (220)
T ss_pred             CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhcCCHHHHHHHHhccc-------
Confidence            47899999999999999999999999999999987533            34666677777665443322110       


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                           ..+...+..+.+.+.+...+.+..   ...++||+.++|..|+++|++++|+||.....+...++.+ |+..+  
T Consensus        63 -----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~-gl~~~--  131 (220)
T COG0546          63 -----DEEAAAELVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL-GLADY--  131 (220)
T ss_pred             -----cchhHHHHHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh-CCccc--
Confidence                 011111334444455555454442   2479999999999999999999999999999999999998 99999  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEE-EEcCCCchhHhhhcC
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVRIID  294 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v-~~~~~~~~~~~~~~~  294 (298)
                      |+.++++++....||+|..+..+++++|++|++++||||+.+|+++|++||+.+| +.||....+++.+..
T Consensus       132 F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~  202 (220)
T COG0546         132 FDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAG  202 (220)
T ss_pred             cceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcC
Confidence            9999998889999999999999999999998899999999999999999999998 666654445555443

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.97  E-value=6e-30  Score=210.90  Aligned_cols=196  Identities=20%  Similarity=0.262  Sum_probs=152.5

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHH-HhcCChhhHHHHH-HHcCCCCCccc
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-QIGGGKPKMRWYF-KEHGWPSSTIF  144 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~g~~~~~~~  144 (298)
                      +|+|+||+||||+|+...+..+|.++++++|.+...             +++.. ..|....++...+ ...|.+     
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~~-----   62 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTP-------------EEVQSAWMGQSKIEAIRALLALDGAD-----   62 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCH-------------HHHHHhhcCCCHHHHHHHHHhccCCC-----
Confidence            589999999999999999999999999999876432             12222 4555555443333 332321     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc--cc
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME--RF  222 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~--~~  222 (298)
                            +.    ..+.+...+.+.+...+......++||+.++|+.|+++|++++|+||+....+...++.+ ++.  .+
T Consensus        63 ------~~----~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~-~l~~~~~  131 (220)
T TIGR03351        63 ------EA----EAQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL-GWTVGDD  131 (220)
T ss_pred             ------HH----HHHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh-hhhhhcc
Confidence                  11    123333444444544443345689999999999999999999999999999999999998 888  77


Q ss_pred             cCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecChhhHHHHHHcCCeE-EEE-cCCCchhHhhhc
Q 022348          223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMAC-VIT-YTSSTAEQVRII  293 (298)
Q Consensus       223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~-~~~~~~vgD~~~Di~~a~~aG~~~-v~~-~~~~~~~~~~~~  293 (298)
                        |+.++++++....||+|++|..+++++|+. |++|+||||+..|+++|+++||.+ +++ ++....+++...
T Consensus       132 --f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~  203 (220)
T TIGR03351       132 --VDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRH  203 (220)
T ss_pred             --CCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhc
Confidence              899999999999999999999999999998 799999999999999999999999 755 445566666544

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.97  E-value=3.7e-30  Score=213.03  Aligned_cols=188  Identities=23%  Similarity=0.304  Sum_probs=145.3

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcccC
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD  145 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~  145 (298)
                      ++|+|+||+||||+|+...+..+|+.+++++|.+...            .+.+....|.+..........          
T Consensus        11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~----------   68 (229)
T PRK13226         11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPIT------------LAQLRPVVSKGARAMLAVAFP----------   68 (229)
T ss_pred             cCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhhhHHHHHHHHHhc----------
Confidence            6799999999999999999999999999999975432            224444555554433222110          


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL  225 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f  225 (298)
                        ........++.    +.+.+.|..... ....++||+.++|+.|+++|++++|+||+........++.+ ++..+  |
T Consensus        69 --~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~-~l~~~--f  138 (229)
T PRK13226         69 --ELDAAARDALI----PEFLQRYEALIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL-GWEQR--C  138 (229)
T ss_pred             --cCChHHHHHHH----HHHHHHHHHhhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-Cchhc--c
Confidence              00112222222    333344443322 23579999999999999999999999999998888889888 99887  8


Q ss_pred             ceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE-cCCC
Q 022348          226 DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT-YTSS  285 (298)
Q Consensus       226 d~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~-~~~~  285 (298)
                      +.++++++.+..||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|++ |+..
T Consensus       139 ~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~  199 (229)
T PRK13226        139 AVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYR  199 (229)
T ss_pred             cEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCC
Confidence            99999988889999999999999999999999999999999999999999999954 5543

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.97  E-value=7.4e-30  Score=220.90  Aligned_cols=194  Identities=22%  Similarity=0.304  Sum_probs=154.5

Q ss_pred             CccEEEEecCCccccchh-HHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      .+++|||||||||+|+.. .+.++|.++++++|.+...            .+.+....|.+.......+.....      
T Consensus       130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~------------~e~~~~~~G~~~~~~l~~ll~~~~------  191 (381)
T PLN02575        130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPP------------AFILRRVEGMKNEQAISEVLCWSR------  191 (381)
T ss_pred             CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCH------------HHHHHHhcCCCHHHHHHHHhhccC------
Confidence            699999999999999986 6678999999999986533            123445667666554433322111      


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                           ...    ..+.+.+.+.+.|.+... ....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+  
T Consensus       192 -----~~~----~~e~l~~~~~~~y~~~~~-~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l-gL~~y--  258 (381)
T PLN02575        192 -----DPA----ELRRMATRKEEIYQALQG-GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI-GIRGF--  258 (381)
T ss_pred             -----CHH----HHHHHHHHHHHHHHHHhc-cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCHHH--
Confidence                 111    123444445555555542 34579999999999999999999999999999999999998 99999  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQV  290 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~  290 (298)
                      ||.+++++++...||+|++|..+++++|+.|++|+||||+..|+++|+++||.+|++.+.....++
T Consensus       259 Fd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l  324 (381)
T PLN02575        259 FSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYEL  324 (381)
T ss_pred             ceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHh
Confidence            999999999999999999999999999999999999999999999999999999988765555443

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.97  E-value=2.9e-30  Score=211.67  Aligned_cols=190  Identities=31%  Similarity=0.527  Sum_probs=148.6

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcccC
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD  145 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~  145 (298)
                      ++++|||||||||+|++..+.++|.++++++|+....             +......|.........+.+......    
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~----   63 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISD-------------EEIRELHGGGIARIIDLLRKLAAGED----   63 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCH-------------HHHHHHHCCChHHHHHHHHHHhcCCc----
Confidence            4799999999999999999999999999999987543             23344456554444444433211100    


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL  225 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f  225 (298)
                        ....       ....+.........  .....+.||+.++|+.|+++|++++++|++....+...++.+ |+.++  |
T Consensus        64 --~~~~-------~~~~~~~~~~~~~~--~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~-gl~~~--f  129 (221)
T COG0637          64 --PADL-------AELERLLYEAEALE--LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL-GLLDY--F  129 (221)
T ss_pred             --ccCH-------HHHHHHHHHHHHhh--hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc-cChhh--c
Confidence              0000       11111111111121  345689999999999999999999999999999999999998 99998  9


Q ss_pred             ceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          226 DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       226 d~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      +.+++++++..+||+|++|..++++||+.|++|++|+|+.+++++|++|||.+|++.+.+.
T Consensus       130 ~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~  190 (221)
T COG0637         130 DVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD  190 (221)
T ss_pred             chhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence            9999999999999999999999999999999999999999999999999999998887544

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.97  E-value=1.3e-29  Score=209.14  Aligned_cols=192  Identities=24%  Similarity=0.404  Sum_probs=149.0

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHH-HHcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~g~~~~~~~  144 (298)
                      ++++|+||+||||+|+...+..++.++++++|.+...            .+.+....|.........+ ...++.     
T Consensus         6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~-----   68 (222)
T PRK10826          6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISR------------REELPDTLGLRIDQVVDLWYARQPWN-----   68 (222)
T ss_pred             cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCH------------HHHHHHhhCCCHHHHHHHHHHhcCCC-----
Confidence            6899999999999999999999999999999875432            1234445555544433322 222211     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                            .....++...+.+.+    ...+ .....++||+.++|..|+++|++++|+||+....+...++.+ ++..+  
T Consensus        69 ------~~~~~~~~~~~~~~~----~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~--  134 (222)
T PRK10826         69 ------GPSRQEVVQRIIARV----ISLI-EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF-DLRDY--  134 (222)
T ss_pred             ------CCCHHHHHHHHHHHH----HHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC-cchhc--
Confidence                  111122222333222    2222 134579999999999999999999999999999999999998 99988  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      |+.++++++++.+||+|++|+.+++++|+.|++|++|||+.+|+++|+++|+++|++..+....
T Consensus       135 f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~  198 (222)
T PRK10826        135 FDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQN  198 (222)
T ss_pred             ccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCc
Confidence            9999999999999999999999999999999999999999999999999999999888766543

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.97  E-value=2.8e-29  Score=211.20  Aligned_cols=190  Identities=23%  Similarity=0.340  Sum_probs=140.2

Q ss_pred             ccEEEEecCCccccchh-HHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHH-----------HHHH
Q 022348           67 LQALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-----------WYFK  134 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----------~~~~  134 (298)
                      +++|+||+||||+|+.. .+..+|.++++++|.+...             +++...+|.+.....           .+..
T Consensus         2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~   68 (253)
T TIGR01422         2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITL-------------EEARGPMGLGKWDHIRALLKMPAVAERWRA   68 (253)
T ss_pred             ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccH-------------HHHHHhcCccHHHHHHHHhcCHHHHHHHHH
Confidence            68999999999999864 3578999999998875322             223334444432211           1122


Q ss_pred             HcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHH
Q 022348          135 EHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE  214 (298)
Q Consensus       135 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~  214 (298)
                      .+|..         ...+..    +.+.+.+...+...+ .....++||+.++|+.|+++|++++|+||+....+...++
T Consensus        69 ~~~~~---------~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~  134 (253)
T TIGR01422        69 KFGRL---------PTEADI----EAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAP  134 (253)
T ss_pred             HhCCC---------CCHHHH----HHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHH
Confidence            22221         111222    223333333333332 2346899999999999999999999999999999999999


Q ss_pred             HHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecChhhHHHHHHcCCeEEEE-cCCC
Q 022348          215 NLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACVIT-YTSS  285 (298)
Q Consensus       215 ~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~-~~~~~~vgD~~~Di~~a~~aG~~~v~~-~~~~  285 (298)
                      .+ ++..++ ||.++++++++..||+|++|..+++++|+. |++|++|||+.+|+++|+++|+.+|++ +|..
T Consensus       135 ~~-gl~~~f-~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~  205 (253)
T TIGR01422       135 EA-ALQGYR-PDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSN  205 (253)
T ss_pred             HH-HhcCCC-CceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence            98 888761 389999999999999999999999999995 999999999999999999999999955 5543

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.97  E-value=3.4e-29  Score=205.40  Aligned_cols=193  Identities=23%  Similarity=0.375  Sum_probs=147.5

Q ss_pred             EEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHH-HHHcCCCCCcccCCCC
Q 022348           70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWY-FKEHGWPSSTIFDNPP  148 (298)
Q Consensus        70 viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~g~~~~~~~~~~~  148 (298)
                      |+||+||||+|+...+..++..+++++|.+...            .+.+....|.+....... +...+..         
T Consensus         1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~---------   59 (213)
T TIGR01449         1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPAT------------LARVIGFIGNGVPVLMERVLAWAGQE---------   59 (213)
T ss_pred             CeecCCCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhcccHHHHHHHHhhccccc---------
Confidence            699999999999998899999999999875322            223444556554433222 3322211         


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceE
Q 022348          149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF  228 (298)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v  228 (298)
                      ...+    ..+.+.+.+.+.|.+.. .....++||+.++|+.|+++|++++|+||+....++..++++ ++..+  |+.+
T Consensus        60 ~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~~  131 (213)
T TIGR01449        60 PDAQ----RVAELRKLFDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL-GLAKY--FSVL  131 (213)
T ss_pred             cChH----HHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CcHhh--CcEE
Confidence            1111    12333444444555443 234579999999999999999999999999999999999998 99988  9999


Q ss_pred             EeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE-cCCCchhHhh
Q 022348          229 LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT-YTSSTAEQVR  291 (298)
Q Consensus       229 ~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~-~~~~~~~~~~  291 (298)
                      +++++++..||+|++|..+++++|++|++|++|||+.+|+++|+++|+.++++ +|....+.+.
T Consensus       132 ~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~  195 (213)
T TIGR01449       132 IGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAID  195 (213)
T ss_pred             EecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchh
Confidence            99999999999999999999999999999999999999999999999999965 4444444444

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK11587 putative phosphatase; Provisional

Probab=99.97  E-value=2.9e-29  Score=206.38  Aligned_cols=186  Identities=19%  Similarity=0.346  Sum_probs=137.8

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHH-HhcCChhhHHHHHHHcCCCCCcc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-QIGGGKPKMRWYFKEHGWPSSTI  143 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~g~~~~~~  143 (298)
                      |++|+|+||+||||+|+...+..+|.++++++|++.               .++.. ..|.+.......+.. +.     
T Consensus         1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~---------------~~~~~~~~g~~~~~~~~~~~~-~~-----   59 (218)
T PRK11587          1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP---------------DEVLNFIHGKQAITSLRHFMA-GA-----   59 (218)
T ss_pred             CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH---------------HHHHHHHcCCCHHHHHHHHhc-cC-----
Confidence            368999999999999999999999999999999742               12222 235444333222211 00     


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                            ..+   ++.+.+...  ..+.... .....++||+.++|+.|+++|++++|+||+........++.. ++. + 
T Consensus        60 ------~~~---~~~~~~~~~--~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~-~l~-~-  124 (218)
T PRK11587         60 ------SEA---EIQAEFTRL--EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA-GLP-A-  124 (218)
T ss_pred             ------CcH---HHHHHHHHH--HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc-CCC-C-
Confidence                  111   111111111  1111111 235679999999999999999999999999887777777766 773 3 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCch
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA  287 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~  287 (298)
                       |+.+++++++...||+|++|..+++++|+.|++|+||||+..|+++|+++|+.+|++..+...
T Consensus       125 -~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~  187 (218)
T PRK11587        125 -PEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADT  187 (218)
T ss_pred             -ccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCch
Confidence             678888888888999999999999999999999999999999999999999999988765443

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.97  E-value=1.1e-28  Score=208.97  Aligned_cols=191  Identities=24%  Similarity=0.337  Sum_probs=139.0

Q ss_pred             CCccEEEEecCCccccchhH-HHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHH-H----------H
Q 022348           65 QSLQALIFDCDGVIIESEHL-HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-W----------Y  132 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~----------~  132 (298)
                      +++|+|+||+||||+|+... +..+|.++++++|.+...             +++...+|.+..... .          +
T Consensus         2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~~~   68 (267)
T PRK13478          2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITL-------------EEARGPMGLGKWDHIRALLKMPRVAARW   68 (267)
T ss_pred             CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHhcHHHHHHH
Confidence            46899999999999998643 467999999998875322             223334444432211 1          1


Q ss_pred             HHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHH
Q 022348          133 FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC  212 (298)
Q Consensus       133 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~  212 (298)
                      ...+|.+         ...+...+    +...+.+.+.+.+ .....++||+.++|+.|+++|++++|+||+....+...
T Consensus        69 ~~~~g~~---------~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~  134 (267)
T PRK13478         69 QAVFGRL---------PTEADVDA----LYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVV  134 (267)
T ss_pred             HHHhCCC---------CCHHHHHH----HHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHH
Confidence            1122211         11122222    2233333333332 23457999999999999999999999999999988889


Q ss_pred             HHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          213 LENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       213 l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~-~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      ++.+ ++..++ ||.++++++++..||+|++|..+++++|+. +++|+||||+.+|+++|+++|+.+|++..+
T Consensus       135 l~~~-~l~~~~-~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g  205 (267)
T PRK13478        135 VPLA-AAQGYR-PDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS  205 (267)
T ss_pred             HHHH-hhcCCC-ceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence            9887 776651 489999999999999999999999999996 699999999999999999999999965443

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.97  E-value=1.3e-28  Score=208.42  Aligned_cols=201  Identities=22%  Similarity=0.331  Sum_probs=150.9

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      ..+|+|+|||||||+|+...+..++..+++++|.+...            .+.+....|.+...+...+....      +
T Consensus        11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~l~~~------~   72 (272)
T PRK13223         11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAG------------LEAVRHWVGNGAPVLVRRALAGS------I   72 (272)
T ss_pred             ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhChhHHHHHHHHhccc------c
Confidence            36899999999999999999999999999999976433            12344456655544332221100      0


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                      .....++.    ..+.+.+.+.+.|...  .....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+  
T Consensus        73 ~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~-~i~~~--  143 (272)
T PRK13223         73 DHDGVDDE----LAEQALALFMEAYADS--HELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM-KIGRY--  143 (272)
T ss_pred             cccCCCHH----HHHHHHHHHHHHHHhc--CcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc-CcHhh--
Confidence            00111111    2233334444444432  123578999999999999999999999999998888899887 99888  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE-cCCCchhHhhh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT-YTSSTAEQVRI  292 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~-~~~~~~~~~~~  292 (298)
                      |+.++++++.+..||+|++|+.+++++|+.+++|++|||+.+|+++|+++|+.++++ +|.....++.+
T Consensus       144 f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~  212 (272)
T PRK13223        144 FRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAE  212 (272)
T ss_pred             CeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhh
Confidence            899999999999999999999999999999999999999999999999999999855 55555554443

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.97  E-value=1.9e-28  Score=199.74  Aligned_cols=185  Identities=28%  Similarity=0.463  Sum_probs=143.6

Q ss_pred             EEEecCCccccchhHHHHHHHHHHhh-cCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcccCCCC
Q 022348           70 LIFDCDGVIIESEHLHRQAYNDAFSH-FNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPP  148 (298)
Q Consensus        70 viFD~DGTL~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~  148 (298)
                      |+||+||||+|+...+.+++++++++ ++.....            .+.+....|......   +...|.+         
T Consensus         1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~~~---~~~~~~~---------   56 (205)
T TIGR01454         1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAP------------FEEYRRHLGRYFPDI---MRIMGLP---------   56 (205)
T ss_pred             CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCC------------HHHHHHHhCccHHHH---HHHcCCC---------
Confidence            68999999999999999999999987 4654322            234444556544333   3333321         


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceE
Q 022348          149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF  228 (298)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v  228 (298)
                        ...    .+.   .....+. .  .....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+  |+.+
T Consensus        57 --~~~----~~~---~~~~~~~-~--~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-~l~~~--f~~i  121 (205)
T TIGR01454        57 --LEM----EEP---FVRESYR-L--AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL-GLLPL--FDHV  121 (205)
T ss_pred             --HHH----HHH---HHHHHHH-h--hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc-CChhh--eeeE
Confidence              000    011   1111221 1  235689999999999999999999999999999899999988 99888  8999


Q ss_pred             EeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEE-EEcCCCchhHhhhc
Q 022348          229 LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVRII  293 (298)
Q Consensus       229 ~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v-~~~~~~~~~~~~~~  293 (298)
                      +++++.+.+||+|++|..+++++|+++++|+||||+.+|+++|+++|+++| +.||....+++...
T Consensus       122 ~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~  187 (205)
T TIGR01454       122 IGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAA  187 (205)
T ss_pred             EecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhc
Confidence            999998899999999999999999999999999999999999999999998 66777677666543

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.96  E-value=2e-28  Score=196.42  Aligned_cols=184  Identities=29%  Similarity=0.491  Sum_probs=140.6

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHH-HHHHHcCCCCCcccC
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSSTIFD  145 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~~  145 (298)
                      +++|+||+||||+|+...+..++.++++++|.+..          .   +......|.+..... ..+.+.+..      
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~----------~---~~~~~~~g~~~~~~~~~~~~~~~~~------   61 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFD----------K---QYNTSLGGLSREDILRAILKLRKPG------   61 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCC----------H---HHHHHcCCCCHHHHHHHHHHhcCCC------
Confidence            58999999999999999999999999999887521          1   122223444433332 233332211      


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL  225 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f  225 (298)
                         ...+.    ...+.+.+.+.+.+.+......++||+.++|+.|+++|++++++||+  ..++..++.+ ++..+  |
T Consensus        62 ---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~-~l~~~--f  129 (185)
T TIGR02009        62 ---LSLET----IHQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL-GLTDY--F  129 (185)
T ss_pred             ---CCHHH----HHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc-ChHHH--C
Confidence               11122    22333444445555443345689999999999999999999999998  5578888887 99988  9


Q ss_pred             ceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          226 DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       226 d~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      +.++++++.+..||+|++|..+++++|++|+++++|||+..|+++|+++|+++|.+
T Consensus       130 ~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       130 DAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             CEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence            99999999999999999999999999999999999999999999999999998853

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.96  E-value=2.4e-28  Score=195.97  Aligned_cols=183  Identities=27%  Similarity=0.493  Sum_probs=137.9

Q ss_pred             EEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhH-HHHHHHcCCCCCcccCCC
Q 022348           69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDNP  147 (298)
Q Consensus        69 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~  147 (298)
                      +|+||+||||+|+...+..+|.++++++|++...             +......|.+.... ...+.+.|.+        
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~--------   59 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDE-------------EFNESLKGVSREDSLERILDLGGKK--------   59 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCChHHHHHHHHHhcCCC--------
Confidence            5899999999999999999999999999875321             12233445444433 3344444432        


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcce
Q 022348          148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC  227 (298)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~  227 (298)
                       ...+...++.+.+.+.+.+.+...   ....++||+.++|+.|+++|++++|+||+..  ....++.+ ++..+  ||.
T Consensus        60 -~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~-~l~~~--f~~  130 (185)
T TIGR01990        60 -YSEEEKEELAERKNDYYVELLKEL---TPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKL-GLIDY--FDA  130 (185)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHhc---CCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhc-CcHhh--CcE
Confidence             112222233333333332222221   2347899999999999999999999998754  45678887 99988  999


Q ss_pred             EEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       228 v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      ++++++++..||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|.+
T Consensus       131 ~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v  184 (185)
T TIGR01990       131 IVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGV  184 (185)
T ss_pred             EEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEec
Confidence            999999999999999999999999999999999999999999999999999865

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.96  E-value=1.6e-28  Score=199.12  Aligned_cols=106  Identities=23%  Similarity=0.388  Sum_probs=100.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|+++|++++|+||+....+...++.+ |+..+  ||.++++++++..||+|++|..+++++|+.|++
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-gl~~~--fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~  167 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA-GLDDP--FDAVLSADAVRAYKPAPQVYQLALEALGVPPDE  167 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC-CChhh--hheeEehhhcCCCCCCHHHHHHHHHHhCCChhh
Confidence            478999999999999999999999999999999999998 99888  999999999999999999999999999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      |+||||+.+|+++|+++|+.+|+++....
T Consensus       168 ~~~vgD~~~Di~~A~~~G~~~i~v~r~~~  196 (198)
T TIGR01428       168 VLFVASNPWDLGGAKKFGFKTAWVNRPGE  196 (198)
T ss_pred             EEEEeCCHHHHHHHHHCCCcEEEecCCCC
Confidence            99999999999999999999998876543

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.96  E-value=6.3e-28  Score=194.04  Aligned_cols=183  Identities=27%  Similarity=0.473  Sum_probs=140.3

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHH-HHHHcCCCCCcc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTI  143 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~  143 (298)
                      .++++|+||+||||+|+...+.++|.++++++|.+...             +.+....|........ .+.+.+..    
T Consensus         3 ~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~----   65 (188)
T PRK10725          3 DRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDE-------------QAMVALNGSPTWRIAQAIIELNQAD----   65 (188)
T ss_pred             CcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCC----
Confidence            36899999999999999999999999999999875321             1334445555444333 33323211    


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                              ...++    +...+...+.... .....++|+ .++|..|++. ++++|+||+....+...++.+ ++..+ 
T Consensus        66 --------~~~~~----~~~~~~~~~~~~~-~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~-~l~~~-  128 (188)
T PRK10725         66 --------LDPHA----LAREKTEAVKSML-LDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL-GLRRY-  128 (188)
T ss_pred             --------CCHHH----HHHHHHHHHHHHH-hccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC-CcHhH-
Confidence                    01111    2222223333332 234567886 5899999876 899999999999999999998 99988 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                       ||.++++++.+..||+|++|..+++++|+.|++|++|||+.+|+++|+++|+++|.+.
T Consensus       129 -fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        129 -FDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             -ceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence             9999999999999999999999999999999999999999999999999999998764

>PLN02940 riboflavin kinase

Probab=99.96  E-value=4.5e-28  Score=213.77  Aligned_cols=187  Identities=22%  Similarity=0.397  Sum_probs=147.1

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhH-HHHHHHcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~  144 (298)
                      .+++|+||+||||+|+...+..+|..+++++|.....             +++....|...... ..++.+.+++     
T Consensus        10 ~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~-----   71 (382)
T PLN02940         10 LVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDG-------------REAQKIVGKTPLEAAATVVEDYGLP-----   71 (382)
T ss_pred             cCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCC-----
Confidence            5999999999999999999999999999999875322             23445666665543 3344555432     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                             ....++...+.    +.+....  ....++||+.++|+.|+++|++++|+||+....+...++...++..+  
T Consensus        72 -------~~~~~~~~~~~----~~~~~~~--~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~--  136 (382)
T PLN02940         72 -------CSTDEFNSEIT----PLLSEQW--CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES--  136 (382)
T ss_pred             -------CCHHHHHHHHH----HHHHHHH--ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh--
Confidence                   11222222222    3233222  24579999999999999999999999999998888888733389888  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      ||.++++++++..||+|++|..+++++|++|++|++|||+..|+++|+++|+.+|++..+.
T Consensus       137 Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~  197 (382)
T PLN02940        137 FSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIP  197 (382)
T ss_pred             CCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999775543

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.96  E-value=5.7e-28  Score=196.65  Aligned_cols=187  Identities=22%  Similarity=0.366  Sum_probs=133.2

Q ss_pred             cEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHH------h----cCChhh-----HHHH
Q 022348           68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ------I----GGGKPK-----MRWY  132 (298)
Q Consensus        68 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----g~~~~~-----~~~~  132 (298)
                      |+|+||+||||+|+...+..++.++++++|++...+.     ....+.+.+...      +    |.....     +...
T Consensus         1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   75 (203)
T TIGR02252         1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDE-----LEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT   75 (203)
T ss_pred             CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHH-----HHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence            5899999999999999899999999999998643210     000111111111      1    112111     1122


Q ss_pred             HHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHH
Q 022348          133 FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC  212 (298)
Q Consensus       133 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~  212 (298)
                      +...|.          ...+       .+.+.+.+.+..+.....+.++||+.++|+.|+++|++++|+||+... ....
T Consensus        76 ~~~~~~----------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~  137 (203)
T TIGR02252        76 FGRAGV----------PDPE-------SFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGL  137 (203)
T ss_pred             HHhcCC----------CCch-------hHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHH
Confidence            222221          0111       112222222322222234578999999999999999999999998765 5778


Q ss_pred             HHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEE
Q 022348          213 LENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVI  280 (298)
Q Consensus       213 l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~  280 (298)
                      ++.+ ++..+  ||.++++++.+..||+|++|..+++++|++|++|+||||+. +|+++|+++|+.+||
T Consensus       138 l~~~-~l~~~--fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       138 LEAL-GLLEY--FDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             HHHC-CcHHh--cceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence            8887 99888  99999999999999999999999999999999999999998 899999999999874

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.96  E-value=2e-27  Score=200.37  Aligned_cols=191  Identities=17%  Similarity=0.216  Sum_probs=143.3

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      ..+++|+||+||||+|+...+..++.++++++|.+...            .+.+....|....   ..+...+.+     
T Consensus        60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~------------~~~~~~~~g~~~~---~i~~~~~~~-----  119 (273)
T PRK13225         60 QTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPID------------ERDYAQLRQWSSR---TIVRRAGLS-----  119 (273)
T ss_pred             hhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhCccHH---HHHHHcCCC-----
Confidence            36999999999999999999999999999999976433            1223334443332   233333321     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                            .....++.    +.+.+.+...  .....++||+.++|+.|+++|++++|+||+....+...++.+ |+..+  
T Consensus       120 ------~~~~~~~~----~~~~~~~~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~-gl~~~--  184 (273)
T PRK13225        120 ------PWQQARLL----QRVQRQLGDC--LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ-GLRSL--  184 (273)
T ss_pred             ------HHHHHHHH----HHHHHHHHhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CChhh--
Confidence                  11222222    2233333333  234679999999999999999999999999999999999998 99988  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE-cCCCchhHhhhc
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT-YTSSTAEQVRII  293 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~-~~~~~~~~~~~~  293 (298)
                      |+.++++++.   +++++.|..+++++|+.|++|+||||+.+|+++|+++|+.+|++ ++.....++...
T Consensus       185 F~~vi~~~~~---~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~  251 (273)
T PRK13225        185 FSVVQAGTPI---LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAA  251 (273)
T ss_pred             eEEEEecCCC---CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHC
Confidence            8988877654   24578999999999999999999999999999999999999955 555555555443

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.96  E-value=4.1e-27  Score=194.85  Aligned_cols=191  Identities=25%  Similarity=0.378  Sum_probs=147.8

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHH-HHHcCCCCCcc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWY-FKEHGWPSSTI  143 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~g~~~~~~  143 (298)
                      +++++|+||+||||+|+...+..++..++++++.+...            .+.+....|.+...+... +...+.     
T Consensus         4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~-----   66 (226)
T PRK13222          4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAG------------EERVRTWVGNGADVLVERALTWAGR-----   66 (226)
T ss_pred             CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhCccHHHHHHHHHhhccC-----
Confidence            46899999999999999988889999999998876433            223444556555443322 222110     


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                          ....+.    .+.+.+.+.+.|.... .....++||+.++++.|++.|++++++||+....++..++.+ ++..+ 
T Consensus        67 ----~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~-  135 (226)
T PRK13222         67 ----EPDEEL----LEKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL-GIADY-  135 (226)
T ss_pred             ----CccHHH----HHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCccC-
Confidence                111122    2333334444454433 124579999999999999999999999999999899999988 99887 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                       |+.++++++++..||+|++|+.+++++++++++|++|||+.+|+++|+++|+.++++..+
T Consensus       136 -f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g  195 (226)
T PRK13222        136 -FSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYG  195 (226)
T ss_pred             -ccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcC
Confidence             899999999889999999999999999999999999999999999999999999976543

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.96  E-value=1.5e-27  Score=196.72  Aligned_cols=107  Identities=24%  Similarity=0.440  Sum_probs=99.7

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      .+.++||+.++|+.|+++|++++|+||+....+...++.+ ++..+  ||.++++++.+..||+|++|..+++++|++++
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~-~l~~~--f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~  168 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL-GVRDF--FDAVITSEEEGVEKPHPKIFYAALKRLGVKPE  168 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC-ChHHh--ccEEEEeccCCCCCCCHHHHHHHHHHcCCChh
Confidence            3579999999999999999999999999988889999998 99988  99999999999999999999999999999999


Q ss_pred             cEEEEecCh-hhHHHHHHcCCeEEEEcCCCc
Q 022348          257 DCLVVEDSV-IGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       257 ~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      +|+||||+. +|+.+|+++|+.+|++..+..
T Consensus       169 ~~~~igDs~~~di~~A~~aG~~~i~~~~~~~  199 (221)
T TIGR02253       169 EAVMVGDRLDKDIKGAKNLGMKTVWINQGKS  199 (221)
T ss_pred             hEEEECCChHHHHHHHHHCCCEEEEECCCCC
Confidence            999999998 899999999999998765543

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.96  E-value=2.2e-27  Score=195.74  Aligned_cols=182  Identities=25%  Similarity=0.450  Sum_probs=137.4

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHH-HHHHcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~  144 (298)
                      ++++|+||+||||+|+...+.++|.++++++|++...         .   +.+....|.....+.. ++.++|.+.    
T Consensus         3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~---------~---~~~~~~~g~~~~~~~~~~~~~~~~~~----   66 (221)
T PRK10563          3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSL---------E---EVFKRFKGVKLYEIIDIISKEHGVTL----   66 (221)
T ss_pred             CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCH---------H---HHHHHhcCCCHHHHHHHHHHHhCCCC----
Confidence            6899999999999999999899999999999975322         1   1122233444433333 333444321    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                              ...+    +.+.+.+.+.... .....++||+.++|+.|+   ++++|+||+....+...++.+ ++..+  
T Consensus        67 --------~~~~----~~~~~~~~~~~~~-~~~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~-~l~~~--  127 (221)
T PRK10563         67 --------AKAE----LEPVYRAEVARLF-DSELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKT-GMLHY--  127 (221)
T ss_pred             --------CHHH----HHHHHHHHHHHHH-HccCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhc-ChHHh--
Confidence                    1112    2222222222221 234689999999999993   899999999988899999988 99988  


Q ss_pred             cc-eEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          225 LD-CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       225 fd-~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      |+ .++++++++..||+|++|..+++++|+.|++|+||||+..|+++|+++|+.++++.
T Consensus       128 F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~  186 (221)
T PRK10563        128 FPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFC  186 (221)
T ss_pred             CcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEEC
Confidence            85 68888888999999999999999999999999999999999999999999998664

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.96  E-value=3.1e-27  Score=194.54  Aligned_cols=108  Identities=21%  Similarity=0.324  Sum_probs=98.7

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      ....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+  ||.++++++++..||+|++|..+++++|++|
T Consensus        90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~-~l~~~--fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p  166 (224)
T PRK14988         90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT-GLDAH--LDLLLSTHTFGYPKEDQRLWQAVAEHTGLKA  166 (224)
T ss_pred             ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC-CcHHH--CCEEEEeeeCCCCCCCHHHHHHHHHHcCCCh
Confidence            34689999999999999999999999999999899889887 99988  9999999999999999999999999999999


Q ss_pred             CcEEEEecChhhHHHHHHcCCeE-EEEcCCCc
Q 022348          256 KDCLVVEDSVIGLQAATRAGMAC-VITYTSST  286 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~-v~~~~~~~  286 (298)
                      ++|+||||+..|+++|+++||.+ +.+.++..
T Consensus       167 ~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~  198 (224)
T PRK14988        167 ERTLFIDDSEPILDAAAQFGIRYCLGVTNPDS  198 (224)
T ss_pred             HHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCC
Confidence            99999999999999999999985 45555443

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.96  E-value=1.1e-26  Score=227.25  Aligned_cols=204  Identities=29%  Similarity=0.454  Sum_probs=155.9

Q ss_pred             CCcCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHH-HHcCCCC
Q 022348           62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPS  140 (298)
Q Consensus        62 ~~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~g~~~  140 (298)
                      ..+.++++|+|||||||+|+...+.++|.++++++|++...             +++....|.+...+...+ ...+++ 
T Consensus        70 ~~~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~-------------e~~~~~~G~~~~~~~~~~~~~~~l~-  135 (1057)
T PLN02919         70 EEWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTV-------------EDFVPFMGTGEANFLGGVASVKGVK-  135 (1057)
T ss_pred             CcCCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCCCHHHHHHHHHHhcCCC-
Confidence            45678999999999999999999999999999999875321             234445666555443332 222221 


Q ss_pred             CcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          141 STIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                                +....+..+.+.+.+.+.+..   .....++||+.++|++|+++|++++|+||.....++..++.+ ++.
T Consensus       136 ----------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~-gl~  201 (1057)
T PLN02919        136 ----------GFDPDAAKKRFFEIYLEKYAK---PNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA-GLP  201 (1057)
T ss_pred             ----------CCCHHHHHHHHHHHHHHHhhh---cccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc-CCC
Confidence                      001112222222322222222   122347999999999999999999999999999999999998 885


Q ss_pred             -cccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhhhcCC
Q 022348          221 -RFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRIIDP  295 (298)
Q Consensus       221 -~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~~~~  295 (298)
                       .+  ||.++++++++..||+|++|..+++++|+.|++|+||||+..|+++|+++||.+|++......+++...++
T Consensus       202 ~~~--Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a  275 (1057)
T PLN02919        202 LSM--FDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGP  275 (1057)
T ss_pred             hhH--CCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCC
Confidence             67  89999999999999999999999999999999999999999999999999999998877767777765553

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.95  E-value=1.4e-26  Score=183.74  Aligned_cols=174  Identities=26%  Similarity=0.481  Sum_probs=134.3

Q ss_pred             EEEecCCccccchhHHHHHHHH-HHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhH-HHHHHHcCCCCCcccCCC
Q 022348           70 LIFDCDGVIIESEHLHRQAYND-AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDNP  147 (298)
Q Consensus        70 viFD~DGTL~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~  147 (298)
                      |+||+||||+|+...+.+++.. +.+.++.+.             ..+.+....+...... ..++...+..        
T Consensus         1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   59 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEI-------------SAEELRELFGKSYEEALERLLERFGID--------   59 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHH-------------HHHHHHHHTTSHHHHHHHHHHHHHHHH--------
T ss_pred             cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCC-------------CHHHHHHHhCCCHHHHHHHhhhccchh--------
Confidence            7999999999999887788877 466676531             1223333443333332 2222222110        


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcce
Q 022348          148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC  227 (298)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~  227 (298)
                                    .....+.+.+........++||+.++|+.|+++|++++++||+....+...++.+ ++..+  |+.
T Consensus        60 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~-~~~~~--f~~  122 (176)
T PF13419_consen   60 --------------PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL-GLDDY--FDE  122 (176)
T ss_dssp             --------------HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT-THGGG--CSE
T ss_pred             --------------HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeecCCccccccccccc-ccccc--ccc
Confidence                          1112222333222345689999999999999999999999999999999999998 99988  999


Q ss_pred             EEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       228 v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      ++++++.+..||++++|+.+++++|+.|++|+||||+..|+++|+++||.+|++
T Consensus       123 i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  123 IISSDDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             EEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred             ccccchhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence            999999999999999999999999999999999999999999999999999875

...

>PRK09449 dUMP phosphatase; Provisional

Probab=99.95  E-value=1.2e-26  Score=191.80  Aligned_cols=101  Identities=21%  Similarity=0.396  Sum_probs=94.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC-C
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE-K  256 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~-~  256 (298)
                      ..++||+.++|+.|+ +|++++|+||+....+...++.+ ++..+  ||.++++++.+..||+|++|..+++++|+.+ +
T Consensus        94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~-~l~~~--fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~  169 (224)
T PRK09449         94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT-GLRDY--FDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS  169 (224)
T ss_pred             CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC-ChHHH--cCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence            579999999999999 57999999999999888899998 99988  9999999999999999999999999999865 7


Q ss_pred             cEEEEecCh-hhHHHHHHcCCeEEEEc
Q 022348          257 DCLVVEDSV-IGLQAATRAGMACVITY  282 (298)
Q Consensus       257 ~~~~vgD~~-~Di~~a~~aG~~~v~~~  282 (298)
                      +|+||||+. +|+++|+++|+.++++.
T Consensus       170 ~~~~vgD~~~~Di~~A~~aG~~~i~~~  196 (224)
T PRK09449        170 RVLMVGDNLHSDILGGINAGIDTCWLN  196 (224)
T ss_pred             cEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence            999999998 69999999999999875

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.95  E-value=3.6e-26  Score=187.14  Aligned_cols=106  Identities=21%  Similarity=0.341  Sum_probs=92.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhh--HHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~--~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      ...++||+.++|+.|+++|++++|+||+....  ....+... ++..+  ||.++++++.+..||+|++|..+++++|++
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~-~l~~~--fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~  168 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG-DIMAL--FDAVVESCLEGLRKPDPRIYQLMLERLGVA  168 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh-hhHhh--CCEEEEeeecCCCCCCHHHHHHHHHHcCCC
Confidence            46799999999999999999999999987543  22233334 67777  899999999999999999999999999999


Q ss_pred             CCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          255 EKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       255 ~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      |++|+||||+..|+++|+++|+.+|++.+..
T Consensus       169 ~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~  199 (211)
T TIGR02247       169 PEECVFLDDLGSNLKPAAALGITTIKVSDEE  199 (211)
T ss_pred             HHHeEEEcCCHHHHHHHHHcCCEEEEECCHH
Confidence            9999999999999999999999999876543

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.95  E-value=4.7e-26  Score=188.21  Aligned_cols=182  Identities=19%  Similarity=0.344  Sum_probs=134.0

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHH-------HhcCCh---hh-----HHH
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-------QIGGGK---PK-----MRW  131 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~---~~-----~~~  131 (298)
                      +|+|+||+||||+|+......++.++++++|+....          .....+..       .+..+.   ..     +..
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTE----------DMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSA   70 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccH----------HHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            589999999999999998888999999888875321          11111110       000000   00     011


Q ss_pred             HHHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHH
Q 022348          132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL  211 (298)
Q Consensus       132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~  211 (298)
                      .+.+.+.+            ..        .+.+...|.... .....++||+.++|+.|+++ ++++|+||+....+..
T Consensus        71 ~~~~~~~~------------~~--------~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~  128 (224)
T TIGR02254        71 LLKEYNTE------------AD--------EALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYK  128 (224)
T ss_pred             HHHHhCCC------------Cc--------HHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHH
Confidence            11111110            00        001122233322 12357999999999999999 9999999999998999


Q ss_pred             HHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHh-CCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcC
Q 022348          212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL-GISEKDCLVVEDSV-IGLQAATRAGMACVITYT  283 (298)
Q Consensus       212 ~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l-gi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~  283 (298)
                      .++.+ ++..+  ||.++++++.+..||+|++|..+++++ |+.|++|+||||+. +|+++|+++|++++++..
T Consensus       129 ~l~~~-~l~~~--fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~  199 (224)
T TIGR02254       129 RLRKS-GLFPF--FDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNP  199 (224)
T ss_pred             HHHHC-CcHhh--cCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECC
Confidence            99998 99988  999999999999999999999999999 99999999999998 799999999999997643

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.94  E-value=1.1e-25  Score=187.34  Aligned_cols=191  Identities=14%  Similarity=0.200  Sum_probs=131.6

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCC------------hhhHHHH
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG------------KPKMRWY  132 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------------~~~~~~~  132 (298)
                      .++|+|+||+||||+|+...+..+++++++.++...+..    ..+....++.+...++..            ...+...
T Consensus         8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   83 (238)
T PRK10748          8 GRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPAL----RSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQA   83 (238)
T ss_pred             CCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcch----hhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHH
Confidence            368999999999999999988888888776653211100    001122222222211110            1123334


Q ss_pred             HHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHH
Q 022348          133 FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC  212 (298)
Q Consensus       133 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~  212 (298)
                      +.+.|++           .+......    +.....+..+.  ..+.++||+.++|+.|++. ++++|+||++..     
T Consensus        84 ~~~~g~~-----------~~~~~~~~----~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----  140 (238)
T PRK10748         84 MLDAGLS-----------AEEASAGA----DAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----  140 (238)
T ss_pred             HHHcCCC-----------HHHHHHHH----HHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----
Confidence            4444432           11111111    11112222221  2357999999999999986 999999998765     


Q ss_pred             HHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCC
Q 022348          213 LENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       213 l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~  285 (298)
                      ++.+ |+..+  ||.++++++.+..||+|++|..+++++|+.|++|+||||+. .|+.+|+++||.+++++...
T Consensus       141 ~~~~-gl~~~--fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~  211 (238)
T PRK10748        141 PELF-GLGDY--FEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPEN  211 (238)
T ss_pred             HHHC-CcHHh--hceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCC
Confidence            3555 99988  99999999999999999999999999999999999999995 89999999999999887643

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.94  E-value=1.5e-25  Score=203.30  Aligned_cols=190  Identities=18%  Similarity=0.243  Sum_probs=141.6

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHH-cCCCCCcc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWPSSTI  143 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~g~~~~~~  143 (298)
                      +++++|+||+||||+|+...+.++|.+++++++......     .  ....+.+....|.+.......+.. .+      
T Consensus       239 ~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~G~~~~~~~~~l~~~~~------  305 (459)
T PRK06698        239 EMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWD-----T--VTPIDKYREIMGVPLPKVWEALLPDHS------  305 (459)
T ss_pred             HhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccC-----C--CCCHHHHHHHcCCChHHHHHHHhhhcc------
Confidence            468999999999999999999999999999874210000     0  001234555667666554333321 11      


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                                 ....+.+..++.+.+...+......++||+.++|+.|+++|++++|+||+....+...++.+ ++..+ 
T Consensus       306 -----------~~~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~-~l~~~-  372 (459)
T PRK06698        306 -----------LEIREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY-DLDQW-  372 (459)
T ss_pred             -----------hhHHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC-CcHhh-
Confidence                       01122333444444444433345689999999999999999999999999999999999998 99988 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                       |+.+++++++. .||+|++|..++++++  |++|++|||+.+|+++|+++|+.+|++...
T Consensus       373 -f~~i~~~d~v~-~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~  429 (459)
T PRK06698        373 -VTETFSIEQIN-SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFD  429 (459)
T ss_pred             -cceeEecCCCC-CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCC
Confidence             99999998874 4677889999998875  689999999999999999999999976443

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.94  E-value=3.9e-25  Score=178.97  Aligned_cols=180  Identities=21%  Similarity=0.204  Sum_probs=128.2

Q ss_pred             cEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChh---------hHHHHHHHcCC
Q 022348           68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP---------KMRWYFKEHGW  138 (298)
Q Consensus        68 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~~g~  138 (298)
                      ++|+|||||||+|+...+..++.+++++++.....            .+.+....|.+..         .+..++.....
T Consensus         1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   68 (197)
T TIGR01548         1 QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVT------------HADIDHTKLAGNANNDWQLTHRLVVDGLNSASS   68 (197)
T ss_pred             CceEEecCceEEechHHHHHHHHHHHHHHcCCCCC------------HHHHHHHHHccCccCchHHHHHHHHHhhhcccc
Confidence            47999999999999999999999999998743222            1234444544321         12222221100


Q ss_pred             CCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHh--------cCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHH
Q 022348          139 PSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK--------SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI  210 (298)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~  210 (298)
                            . ....+....+    +.+.+.+.|.....        .....+.+++.++|+.|++.|++++|+||+....+.
T Consensus        69 ------~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~  137 (197)
T TIGR01548        69 ------E-RVRDAPTLEA----VTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAA  137 (197)
T ss_pred             ------h-hccCCccHHH----HHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHH
Confidence                  0 0001112222    22333333332100        001235556699999999999999999999999999


Q ss_pred             HHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHc
Q 022348          211 LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA  274 (298)
Q Consensus       211 ~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~a  274 (298)
                      ..++.+ |+..+  |+.++++++... ||+|++|..+++++|+++++|++|||+.+|+++|+++
T Consensus       138 ~~l~~~-gl~~~--f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       138 KFLTTH-GLEIL--FPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA  197 (197)
T ss_pred             HHHHHc-Cchhh--CCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence            999998 99988  999999998877 9999999999999999999999999999999999875

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.94  E-value=2.1e-25  Score=178.70  Aligned_cols=99  Identities=22%  Similarity=0.408  Sum_probs=91.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCC----CCCCHHHHHHHHHHhC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ----KKPDPSIYVTAAKRLG  252 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~----~KP~~~~~~~~~~~lg  252 (298)
                      ...++||+.++|+.|+   .+++|+||+....+...++.+ |+..+  ||.++++++.+.    +||+|++|..+++++|
T Consensus        82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~-gl~~~--fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~  155 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL-GIEDC--FDGIFCFDTANPDYLLPKPSPQAYEKALREAG  155 (184)
T ss_pred             hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc-CcHhh--hCeEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence            3579999999999998   479999999999999999998 99888  999999998876    5999999999999999


Q ss_pred             CCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          253 ISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       253 i~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      +.|++|+||||+..|+++|+++|++++++
T Consensus       156 ~~~~~~l~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       156 VDPERAIFFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             CCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence            99999999999999999999999999864

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.93  E-value=2.8e-24  Score=174.27  Aligned_cols=109  Identities=21%  Similarity=0.364  Sum_probs=97.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .++||+.++|+.|+++|++++|+||+........+....++..+  ||.++++++++..||+|++|..+++++|++|++|
T Consensus        84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~  161 (199)
T PRK09456         84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA  161 (199)
T ss_pred             ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence            58999999999999999999999999887666555554467777  8999999999999999999999999999999999


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      +||||+..|+++|+++|+.++++.++....+
T Consensus       162 l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~  192 (199)
T PRK09456        162 VFFDDNADNIEAANALGITSILVTDKQTIPD  192 (199)
T ss_pred             EEeCCCHHHHHHHHHcCCEEEEecCCccHHH
Confidence            9999999999999999999998877655543

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.93  E-value=2e-24  Score=172.79  Aligned_cols=100  Identities=37%  Similarity=0.707  Sum_probs=92.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|+++|++++|+||+.... ...+.++ ++..+  |+.++++++.+.+||+|++|..+++++|++|++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~-~l~~~--f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~  159 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL-GLRDL--FDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEE  159 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc-CCHHH--CCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcce
Confidence            5799999999999999999999999999887 5555556 99888  999999999999999999999999999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEE
Q 022348          258 CLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      |++|||+..|+++|+++|+.+|++
T Consensus       160 ~~~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       160 CLFVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             EEEEcCCHHHHHHHHHcCCEEEeC
Confidence            999999999999999999999864

HAD subfamilies caused by an overly broad single model.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.93  E-value=4.4e-25  Score=183.02  Aligned_cols=106  Identities=25%  Similarity=0.399  Sum_probs=99.2

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      .++++|++.++|+.|+++ ++++|+||+....+...++++ |+..+  ||.++.+++.+..||+|++|+.+++++|++|+
T Consensus        97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~-gl~~~--Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~  172 (229)
T COG1011          97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL-GLLDY--FDAVFISEDVGVAKPDPEIFEYALEKLGVPPE  172 (229)
T ss_pred             hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc-CChhh--hheEEEecccccCCCCcHHHHHHHHHcCCCcc
Confidence            468999999999999999 999999999988899999998 89988  99999999999999999999999999999999


Q ss_pred             cEEEEecCh-hhHHHHHHcCCeEEEEcCCCc
Q 022348          257 DCLVVEDSV-IGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       257 ~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      +|+||||+. ||+.+|+++||.+||++....
T Consensus       173 ~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~  203 (229)
T COG1011         173 EALFVGDSLENDILGARALGMKTVWINRGGK  203 (229)
T ss_pred             eEEEECCChhhhhHHHHhcCcEEEEECCCCC
Confidence            999999999 577999999999998876543

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.93  E-value=9.7e-26  Score=181.75  Aligned_cols=207  Identities=19%  Similarity=0.323  Sum_probs=137.9

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHH--HHHHHh---cC--ChhhHHHHHHHc
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYD--VLQNQI---GG--GKPKMRWYFKEH  136 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---g~--~~~~~~~~~~~~  136 (298)
                      .+.+++|+||++|||+.........|..+.+.+|++......... +...+..  .....+   .+  .....+..+-+.
T Consensus         4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~   82 (237)
T KOG3085|consen    4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETI-FRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVES   82 (237)
T ss_pred             ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHh-hhHHHHhhcccCCcccccCCcccHHHHHHHHHHH
Confidence            347899999999999997777778899999999988544221110 0000000  000001   11  111111111111


Q ss_pred             CCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHH
Q 022348          137 GWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL  216 (298)
Q Consensus       137 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~  216 (298)
                      .      +....  .+..++..+.   .....|.... ...+...+++.++++.||++|+.++++||.+.. .+..+..+
T Consensus        83 ~------f~~~~--~~~~~~~~~~---~~~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~  149 (237)
T KOG3085|consen   83 T------FGKAG--IDYEEELLEN---FSFRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPL  149 (237)
T ss_pred             H------hcccc--chhHHHHHhh---hhhheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhcc
Confidence            0      00000  0111111111   1112222211 235678889999999999999999999999987 44667666


Q ss_pred             hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCCch
Q 022348          217 IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA  287 (298)
Q Consensus       217 ~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~~  287 (298)
                       ++..+  ||.++.|++++..||+|++|+.+++++|+.|++|+||||+. ||+++|+++||.++++.+..++
T Consensus       150 -~l~~~--fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~  218 (237)
T KOG3085|consen  150 -GLSAY--FDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITA  218 (237)
T ss_pred             -CHHHh--hhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccch
Confidence             89877  99999999999999999999999999999999999999999 7999999999999976655443

>PLN02811 hydrolase

Probab=99.93  E-value=6.9e-24  Score=174.60  Aligned_cols=179  Identities=23%  Similarity=0.389  Sum_probs=131.4

Q ss_pred             cCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHH-HHHcCCCCCcccCCCCCCCh
Q 022348           74 CDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWY-FKEHGWPSSTIFDNPPVTDD  152 (298)
Q Consensus        74 ~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~  152 (298)
                      |||||+|+...+..+|.++++++|++..             .+.+....|......... +...+++.          ..
T Consensus         1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~-------------~~~~~~~~G~~~~~~~~~~~~~~~~~~----------~~   57 (220)
T PLN02811          1 MDGLLLDTEKFYTEVQEKILARYGKTFD-------------WSLKAKMMGKKAIEAARIFVEESGLSD----------SL   57 (220)
T ss_pred             CCCcceecHHHHHHHHHHHHHHcCCCCC-------------HHHHHHccCCCHHHHHHHHHHHhCCCC----------CC
Confidence            7999999999999999999999998532             123344566655544333 33334320          00


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCC
Q 022348          153 DQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD  232 (298)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~  232 (298)
                      ...++.    +.....+....  ....++||+.++|+.|+++|++++|+||+........+....++..+  |+.+++++
T Consensus        58 ~~~~~~----~~~~~~~~~~~--~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~  129 (220)
T PLN02811         58 SPEDFL----VEREAMLQDLF--PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGD  129 (220)
T ss_pred             CHHHHH----HHHHHHHHHHH--hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECC
Confidence            111111    11222222222  23578999999999999999999999999876554434333366777  89999999


Q ss_pred             --CCCCCCCCHHHHHHHHHHhC---CCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          233 --DVKQKKPDPSIYVTAAKRLG---ISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       233 --~~~~~KP~~~~~~~~~~~lg---i~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                        +++..||+|++|..+++++|   +.|++|+||||+..|+++|+++|+.+|++..
T Consensus       130 ~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~  185 (220)
T PLN02811        130 DPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPD  185 (220)
T ss_pred             hhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeC
Confidence              88889999999999999997   9999999999999999999999999997743

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.93  E-value=3.3e-24  Score=166.80  Aligned_cols=154  Identities=24%  Similarity=0.447  Sum_probs=118.6

Q ss_pred             EEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcccCCCC
Q 022348           69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPP  148 (298)
Q Consensus        69 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~  148 (298)
                      +|+||+||||+|+...+..+|.+++++++.+               .+.+....|.+...+..+...             
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~g~~~~~~~~~~~~-------------   52 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEETLEEFGED---------------FQALKALRGLAEELLYRIATS-------------   52 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHHHHHhccc---------------HHHHHHHHccChHHHHHHHHH-------------
Confidence            4899999999999989999999999988742               123332333322222111110             


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceE
Q 022348          149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF  228 (298)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v  228 (298)
                               .+.+..     +     ......+||+.++|+.|+++|++++|+||+....+...++.+  +..+  |+.+
T Consensus        53 ---------~~~~~~-----~-----~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~~~--f~~i  109 (154)
T TIGR01549        53 ---------FEELLG-----Y-----DAEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LGDY--FDLI  109 (154)
T ss_pred             ---------HHHHhC-----c-----chhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HHhc--CcEE
Confidence                     011111     1     123357799999999999999999999999999898888875  5566  8889


Q ss_pred             EeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcC
Q 022348          229 LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG  275 (298)
Q Consensus       229 ~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG  275 (298)
                      +++++.+ .||+|++|..+++++|+++ +|+||||+..|+++|+++|
T Consensus       110 ~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       110 LGSDEFG-AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             EecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence            9988888 9999999999999999999 9999999999999999987

HAD subfamilies caused by an overly broad single model.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.92  E-value=1.7e-23  Score=168.38  Aligned_cols=193  Identities=28%  Similarity=0.419  Sum_probs=150.3

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHH-HcCCCCCc
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFK-EHGWPSST  142 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~  142 (298)
                      ...+.+++||+||||+|++..+.+.|...+.++|...+.             .......|.+..++...+- +...+   
T Consensus         7 ~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~-------------~~~~~~mG~~~~eaa~~~~~~~~dp---   70 (222)
T KOG2914|consen    7 SLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPW-------------DVKVKSMGKRTSEAARLFVKKLPDP---   70 (222)
T ss_pred             ccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChH-------------HHHHHHcCCCHHHHHHHHHhhcCCC---
Confidence            346889999999999999999999999999999974322             2334456766666655554 33332   


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccc
Q 022348          143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF  222 (298)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~  222 (298)
                               ...+++    ...+.+......  ....+.||+.++++.|+.+|++++++|+.+....+..+.++.++-..
T Consensus        71 ---------~s~ee~----~~e~~~~~~~~~--~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~  135 (222)
T KOG2914|consen   71 ---------VSREEF----NKEEEEILDRLF--MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKN  135 (222)
T ss_pred             ---------CCHHHH----HHHHHHHHHHhc--cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHh
Confidence                     223333    333333333332  34578999999999999999999999999999899888888446666


Q ss_pred             cCcceEEe--CCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          223 EGLDCFLA--GDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       223 ~~fd~v~~--~~~~~~~KP~~~~~~~~~~~lgi~~-~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                        |+.++.  +.++..+||+|++|..+++.+|..| +.|++++|++..+++|++|||++|++.+......
T Consensus       136 --f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~  203 (222)
T KOG2914|consen  136 --FSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNL  203 (222)
T ss_pred             --cCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchh
Confidence              777777  5578899999999999999999999 9999999999999999999999999988544333

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.90  E-value=1.3e-23  Score=167.04  Aligned_cols=166  Identities=19%  Similarity=0.312  Sum_probs=116.1

Q ss_pred             EEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCC-hHHHHHHH-HHhcCChh-------hHHHHHHHcCCC
Q 022348           69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD-PEFYDVLQ-NQIGGGKP-------KMRWYFKEHGWP  139 (298)
Q Consensus        69 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~g~~~~-------~~~~~~~~~g~~  139 (298)
                      +|+||+||||+|+...+..++..++.+.+.....       |. ......+. ...|....       .+.....++|++
T Consensus         1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   73 (175)
T TIGR01493         1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDL-------WRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLD   73 (175)
T ss_pred             CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHH-------HHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCC
Confidence            5899999999999988888888877664321000       00 01111111 12221111       123333444432


Q ss_pred             CCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCC
Q 022348          140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM  219 (298)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l  219 (298)
                      ..          .   +    ..+.+.+.+      ..+.++||+.++|+       +++|+||+....+...++++ ++
T Consensus        74 ~~----------~---~----~~~~~~~~~------~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~-~l  122 (175)
T TIGR01493        74 AE----------P---K----YGERLRDAY------KNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQA-GL  122 (175)
T ss_pred             CC----------H---H----HHHHHHHHH------hcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC-CC
Confidence            10          0   0    111111212      23579999999998       37899999999999999998 99


Q ss_pred             ccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHc
Q 022348          220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA  274 (298)
Q Consensus       220 ~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~a  274 (298)
                      ..+  ||.++++++++..||+|++|..+++++|++|++|+||||+..|+++|+++
T Consensus       123 ~~~--fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       123 PWY--FDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             HHH--HhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence            988  99999999999999999999999999999999999999999999999864

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PHA02597 30

Probab=99.89  E-value=3.5e-22  Score=161.77  Aligned_cols=102  Identities=14%  Similarity=0.204  Sum_probs=81.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc--CcceEEeCCCCCCCCCCHHHHHHHHHHhCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE--GLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~--~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      ...++||+.++|+.|++.+ +++++||.........++.+ ++..++  .|+.++++++   .||+|++|..+++++|  
T Consensus        72 ~~~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~-~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~--  144 (197)
T PHA02597         72 YLSAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQF-NLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYG--  144 (197)
T ss_pred             hccCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhC-CHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhC--
Confidence            3569999999999999974 68888987766555455555 666542  1577777765   3677899999999999  


Q ss_pred             CCcEEEEecChhhHHHHHHc--CCeEEEEcCCC
Q 022348          255 EKDCLVVEDSVIGLQAATRA--GMACVITYTSS  285 (298)
Q Consensus       255 ~~~~~~vgD~~~Di~~a~~a--G~~~v~~~~~~  285 (298)
                      +++|+||||+..|+++|+++  |+++|++..+.
T Consensus       145 ~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~  177 (197)
T PHA02597        145 DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE  177 (197)
T ss_pred             CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence            88899999999999999999  99999765443

2 hypothetical protein; Provisional

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.89  E-value=1.1e-21  Score=161.65  Aligned_cols=100  Identities=21%  Similarity=0.239  Sum_probs=85.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEE-------eCC---CCCCCCCCHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFL-------AGD---DVKQKKPDPSIYVTA  247 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~-------~~~---~~~~~KP~~~~~~~~  247 (298)
                      ..++||+.++|+.|+++|++++|+||+....+...++.+ ++..+  |+..+       .+.   ....++|++.+|+.+
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  160 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL-GLDAA--FANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL  160 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCce--EeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence            469999999999999999999999999999899999888 88876  54322       221   122356789999999


Q ss_pred             HHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       248 ~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ++++|+++++|+||||+.+|+++|+.+|+.+++
T Consensus       161 ~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~  193 (219)
T TIGR00338       161 LRKEGISPENTVAVGDGANDLSMIKAAGLGIAF  193 (219)
T ss_pred             HHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe
Confidence            999999999999999999999999999999654

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.88  E-value=1.6e-21  Score=158.38  Aligned_cols=106  Identities=18%  Similarity=0.090  Sum_probs=90.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCC----------CHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKP----------DPSIYVTA  247 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP----------~~~~~~~~  247 (298)
                      ..++||+.++|+.|+++|++++|+||+....++..++.+ |+..+  |+..+..++.+..+|          +++.+..+
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-g~~~~--~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~  155 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL-NPDYV--YSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL  155 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh-CCCeE--EEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence            479999999999999999999999999999999999998 88877  666666655444333          33688899


Q ss_pred             HHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       248 ~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      ++++|+++++|+||||+.+|+++++.+|+.+++..++..
T Consensus       156 ~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~  194 (201)
T TIGR01491       156 KRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHA  194 (201)
T ss_pred             HHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccc
Confidence            999999999999999999999999999999877665544

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PLN02954 phosphoserine phosphatase

Probab=99.88  E-value=5.5e-21  Score=157.92  Aligned_cols=177  Identities=17%  Similarity=0.193  Sum_probs=118.0

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHH-cCCCCCc
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWPSST  142 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~g~~~~~  142 (298)
                      ++++|+|+||+||||++++     .+..+++++|...             ..+++...+.++...+...+.. .+..   
T Consensus         9 ~~~~k~viFDfDGTL~~~~-----~~~~~~~~~g~~~-------------~~~~~~~~~~~g~~~~~~~~~~~~~~~---   67 (224)
T PLN02954          9 WRSADAVCFDVDSTVCVDE-----GIDELAEFCGAGE-------------AVAEWTAKAMGGSVPFEEALAARLSLF---   67 (224)
T ss_pred             HccCCEEEEeCCCcccchH-----HHHHHHHHcCChH-------------HHHHHHHHHHCCCCCHHHHHHHHHHHc---
Confidence            4579999999999999974     3467777777531             1222222222222233333322 2110   


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc-
Q 022348          143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-  221 (298)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~-  221 (298)
                           ..   .    .+    ...+.+..    ....++||+.++|+.|+++|++++|+|++....++..++.+ |+.. 
T Consensus        68 -----~~---~----~~----~~~~~~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~-gi~~~  126 (224)
T PLN02954         68 -----KP---S----LS----QVEEFLEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL-GIPPE  126 (224)
T ss_pred             -----CC---C----HH----HHHHHHHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh-CCChh
Confidence                 00   0    01    11111221    23468999999999999999999999999999999999998 8863 


Q ss_pred             -ccCcceE--------EeCCC----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          222 -FEGLDCF--------LAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       222 -~~~fd~v--------~~~~~----~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                       +  |+..        +.+.+    ....+++|++++.+++++|.  ++|++|||+.+|+.+++++|+.+++.+++..
T Consensus       127 ~~--~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~  200 (224)
T PLN02954        127 NI--FANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQ  200 (224)
T ss_pred             hE--EEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCc
Confidence             4  4321        12211    12356788999999999885  6899999999999999999999877666543

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.87  E-value=1.3e-21  Score=150.51  Aligned_cols=105  Identities=33%  Similarity=0.474  Sum_probs=84.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCCh---------------hhHHHHHHHHhCCccccCcceEE-eCCCCCCCCCCHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFL-AGDDVKQKKPDPS  242 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~---------------~~~~~~l~~~~~l~~~~~fd~v~-~~~~~~~~KP~~~  242 (298)
                      .++||+.++|+.|+++|++++|+||...               ..+...++.+ ++.....|..+. .++..+..||+|+
T Consensus        27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~~~~~KP~~~  105 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL-GVAVDGVLFCPHHPADNCSCRKPKPG  105 (147)
T ss_pred             EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC-CCceeEEEECCCCCCCCCCCCCCCHH
Confidence            5899999999999999999999999873               3455667676 765210011111 1345567899999


Q ss_pred             HHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       243 ~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +|+.+++++|+++++|+||||+..|+++|+++|+.+|+++.+
T Consensus       106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       106 LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence            999999999999999999999999999999999999988753

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.87  E-value=1.2e-20  Score=153.48  Aligned_cols=105  Identities=21%  Similarity=0.275  Sum_probs=88.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHH--hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      ...++||+.++|+.|+++|++++|+||+....+...++..  .++..+  |+.++.. .. ..||+|+.|..+++++|++
T Consensus        93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--f~~~fd~-~~-g~KP~p~~y~~i~~~lgv~  168 (220)
T TIGR01691        93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--FSGYFDT-TV-GLKTEAQSYVKIAGQLGSP  168 (220)
T ss_pred             ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--cceEEEe-Cc-ccCCCHHHHHHHHHHhCcC
Confidence            3469999999999999999999999999988777777664  145555  6666542 23 3699999999999999999


Q ss_pred             CCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          255 EKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       255 ~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      |++|+||||+..|+++|+++||.++++..+.
T Consensus       169 p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g  199 (220)
T TIGR01691       169 PREILFLSDIINELDAARKAGLHTGQLVRPG  199 (220)
T ss_pred             hhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence            9999999999999999999999999665443

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.86  E-value=1.3e-20  Score=161.92  Aligned_cols=102  Identities=20%  Similarity=0.241  Sum_probs=85.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC-----cceEEeCC---CCCCCCCCHHHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG-----LDCFLAGD---DVKQKKPDPSIYVTAAK  249 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~-----fd~v~~~~---~~~~~KP~~~~~~~~~~  249 (298)
                      ++++||+.++++.|++.|++++|+|++.....+..++++ ++.....     .+..+++.   ++..+||+++.++.+++
T Consensus       180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L-gld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~  258 (322)
T PRK11133        180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL-RLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ  258 (322)
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc-CCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence            579999999999999999999999999988888888887 8865311     12222222   23356899999999999


Q ss_pred             HhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          250 RLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       250 ~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ++|+++++|++|||+.||++|++.||+.+++
T Consensus       259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~  289 (322)
T PRK11133        259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY  289 (322)
T ss_pred             HcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence            9999999999999999999999999999876

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.85  E-value=1.3e-20  Score=150.40  Aligned_cols=102  Identities=30%  Similarity=0.409  Sum_probs=84.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCCh---------------hhHHHHHHHHhCCccccCcceEEeC-----CCCCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLAG-----DDVKQKK  238 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~---------------~~~~~~l~~~~~l~~~~~fd~v~~~-----~~~~~~K  238 (298)
                      .++||+.++|++|+++|++++|+||+..               ..+...++.+ ++  .  |+.++.+     ++.+..|
T Consensus        29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~--~--f~~i~~~~~~~~~~~~~~K  103 (181)
T PRK08942         29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR-GG--R--LDGIYYCPHHPEDGCDCRK  103 (181)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CC--c--cceEEECCCCCCCCCcCCC
Confidence            6899999999999999999999999863               2233345554 54  2  6766653     3467889


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          239 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       239 P~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      |+|++|..+++++|+.+++|+||||+.+|+++|+++|+.++++..+.
T Consensus       104 P~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~  150 (181)
T PRK08942        104 PKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGK  150 (181)
T ss_pred             CCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCC
Confidence            99999999999999999999999999999999999999988665443

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.84  E-value=3.3e-20  Score=140.37  Aligned_cols=97  Identities=33%  Similarity=0.502  Sum_probs=84.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCC--------hhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAAT--------KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKR  250 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~--------~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~  250 (298)
                      .++||+.++|+.|+++|++++++||+.        ...+...++.+ ++.    ++.++.+.  +..||+|++|+.++++
T Consensus        25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~-~l~----~~~~~~~~--~~~KP~~~~~~~~~~~   97 (132)
T TIGR01662        25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL-GVP----IDVLYACP--HCRKPKPGMFLEALKR   97 (132)
T ss_pred             eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC-CCC----EEEEEECC--CCCCCChHHHHHHHHH
Confidence            589999999999999999999999998        66778888887 775    23333333  5779999999999999


Q ss_pred             h-CCCCCcEEEEec-ChhhHHHHHHcCCeEEEEc
Q 022348          251 L-GISEKDCLVVED-SVIGLQAATRAGMACVITY  282 (298)
Q Consensus       251 l-gi~~~~~~~vgD-~~~Di~~a~~aG~~~v~~~  282 (298)
                      + +++|++++|||| +..|+++|+++|+.+|+++
T Consensus        98 ~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662        98 FNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             cCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence            9 599999999999 6899999999999999864

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.84  E-value=1.2e-20  Score=147.43  Aligned_cols=111  Identities=14%  Similarity=0.051  Sum_probs=97.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCC-ChhhHHHHHHHHhCCc---------cccCcceEEeCCCCCCCCCCHHHHHH
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAA-TKSSVILCLENLIGME---------RFEGLDCFLAGDDVKQKKPDPSIYVT  246 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~-~~~~~~~~l~~~~~l~---------~~~~fd~v~~~~~~~~~KP~~~~~~~  246 (298)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++.+ ++.         .+  |+.++++++....||.+.+++.
T Consensus        43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~-~l~~~~~~~~~~~~--Fd~iv~~~~~~~~kp~~~i~~~  119 (174)
T TIGR01685        43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF-EITYAGKTVPMHSL--FDDRIEIYKPNKAKQLEMILQK  119 (174)
T ss_pred             EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC-CcCCCCCcccHHHh--ceeeeeccCCchHHHHHHHHHH
Confidence            3579999999999999999999999998 777788888887 887         88  8999999887777888888888


Q ss_pred             HHHHh--CCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHh
Q 022348          247 AAKRL--GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQV  290 (298)
Q Consensus       247 ~~~~l--gi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~  290 (298)
                      +.+.+  |+.|++|+||||+..|+++|+++|+.++++..+.....+
T Consensus       120 ~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~~~~~  165 (174)
T TIGR01685       120 VNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDKGTF  165 (174)
T ss_pred             hhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCccHHHH
Confidence            88777  899999999999999999999999999987655555443

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.83  E-value=3.1e-19  Score=146.38  Aligned_cols=100  Identities=19%  Similarity=0.189  Sum_probs=83.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC----ChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAA----TKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGI  253 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~----~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi  253 (298)
                      ..+++++.++|+.|+++|++++++||.    ....++..++.+ |+..+  |+.++++++....||++.   .+++++|+
T Consensus       113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l-Gi~~~--f~~i~~~d~~~~~Kp~~~---~~l~~~~i  186 (237)
T TIGR01672       113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF-HIPAM--NPVIFAGDKPGQYQYTKT---QWIQDKNI  186 (237)
T ss_pred             CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh-CCchh--eeEEECCCCCCCCCCCHH---HHHHhCCC
Confidence            357788999999999999999999998    445677777777 99888  899999888877888875   35567776


Q ss_pred             CCCcEEEEecChhhHHHHHHcCCeEE-EEcCCCch
Q 022348          254 SEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTA  287 (298)
Q Consensus       254 ~~~~~~~vgD~~~Di~~a~~aG~~~v-~~~~~~~~  287 (298)
                          ++||||+.+|+.+|+++|+.++ +.|+.+..
T Consensus       187 ----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s~  217 (237)
T TIGR01672       187 ----RIHYGDSDNDITAAKEAGARGIRILRASNST  217 (237)
T ss_pred             ----eEEEeCCHHHHHHHHHCCCCEEEEEecCCCC
Confidence                7999999999999999999998 55665543

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.83  E-value=8.5e-20  Score=144.88  Aligned_cols=102  Identities=23%  Similarity=0.289  Sum_probs=81.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCCh---------------hhHHHHHHHHhCCccccCcceEEeC-----------
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLAG-----------  231 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~---------------~~~~~~l~~~~~l~~~~~fd~v~~~-----------  231 (298)
                      +.++||+.++|+.|+++|++++|+||...               ......++.+ ++.    |+.++.+           
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~----~~~i~~~~~~~~~~~~~~   99 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAER-DVD----LDGIYYCPHHPEGVEEFR   99 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CCC----ccEEEECCCCCccccccc
Confidence            36899999999999999999999999874               1222334443 333    5665543           


Q ss_pred             CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeE-EEEcCC
Q 022348          232 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTS  284 (298)
Q Consensus       232 ~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~-v~~~~~  284 (298)
                      ++....||+|++|..+++++|+++++|+||||+..|+++|+++|+.+ +++..+
T Consensus       100 ~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g  153 (176)
T TIGR00213       100 QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTG  153 (176)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecC
Confidence            24557899999999999999999999999999999999999999998 555433

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK06769 hypothetical protein; Validated

Probab=99.83  E-value=1e-19  Score=143.63  Aligned_cols=103  Identities=19%  Similarity=0.308  Sum_probs=82.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChh--------hHHHHHHHHhCCccccCcceEE-eCCCCCCCCCCHHHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKS--------SVILCLENLIGMERFEGLDCFL-AGDDVKQKKPDPSIYVTAAK  249 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~--------~~~~~l~~~~~l~~~~~fd~v~-~~~~~~~~KP~~~~~~~~~~  249 (298)
                      .++||+.++|++|+++|++++|+||....        .....++.+ ++..+  |..+. .+++.+..||+|++|..+++
T Consensus        28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~-g~~~~--~~~~~~~~~~~~~~KP~p~~~~~~~~  104 (173)
T PRK06769         28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF-GFDDI--YLCPHKHGDGCECRKPSTGMLLQAAE  104 (173)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC-CcCEE--EECcCCCCCCCCCCCCCHHHHHHHHH
Confidence            58999999999999999999999998642        122234443 44433  32222 34556788999999999999


Q ss_pred             HhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          250 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       250 ~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      ++|++|++|+||||+..|+++|+++|+.+|++..+
T Consensus       105 ~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g  139 (173)
T PRK06769        105 KHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTG  139 (173)
T ss_pred             HcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence            99999999999999999999999999999966543

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.82  E-value=7.6e-20  Score=142.04  Aligned_cols=103  Identities=18%  Similarity=0.245  Sum_probs=88.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCC---------------hhhHHHHHHHHhCCccccCcceEE-e----CCCCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFL-A----GDDVKQK  237 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~---------------~~~~~~~l~~~~~l~~~~~fd~v~-~----~~~~~~~  237 (298)
                      +.++||+.++|+.|+++|++++|+||..               ...+...++.+ |+.    |+.++ +    +++....
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----fd~ii~~~~~~~~~~~~~  102 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ-GII----FDDVLICPHFPDDNCDCR  102 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC-CCc----eeEEEECCCCCCCCCCCC
Confidence            3699999999999999999999999973               33566677777 775    56554 4    4788889


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      ||+|++|..+++++|+++++|+||||+.+|+++|+++|+.++++....
T Consensus       103 KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~  150 (161)
T TIGR01261       103 KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE  150 (161)
T ss_pred             CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence            999999999999999999999999999999999999999999776554

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.82  E-value=4.9e-19  Score=137.92  Aligned_cols=104  Identities=22%  Similarity=0.311  Sum_probs=93.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCC------CCCCCCHHHHHHHHHH
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDV------KQKKPDPSIYVTAAKR  250 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~------~~~KP~~~~~~~~~~~  250 (298)
                      .+.+.+..+.+|-.|++++  .++.||+...++..+++.+ |+.++  ||.+++.+-.      ..+||++.+|+.+++.
T Consensus        98 ~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L-GieDc--Fegii~~e~~np~~~~~vcKP~~~afE~a~k~  172 (244)
T KOG3109|consen   98 DLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL-GIEDC--FEGIICFETLNPIEKTVVCKPSEEAFEKAMKV  172 (244)
T ss_pred             hcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh-ChHHh--ccceeEeeccCCCCCceeecCCHHHHHHHHHH
Confidence            3689999999999999875  8999999999999999999 99988  9998887532      3789999999999999


Q ss_pred             hCCC-CCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          251 LGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       251 lgi~-~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      .|+. |.+++||+|+.++|..|++.||.++++.-.+
T Consensus       173 agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~  208 (244)
T KOG3109|consen  173 AGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREH  208 (244)
T ss_pred             hCCCCcCceEEEcCchhhHHHHHhccceeEEEEeee
Confidence            9998 9999999999999999999999998765444

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.82  E-value=5.3e-19  Score=145.39  Aligned_cols=102  Identities=22%  Similarity=0.209  Sum_probs=82.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHH----------HHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI----------YVTA  247 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~----------~~~~  247 (298)
                      ..++||+.++|+.|+++|++++|+||+....+..+++.+.....+...+..+.++.....||.|..          +..+
T Consensus        73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~  152 (219)
T PRK09552         73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL  152 (219)
T ss_pred             CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence            579999999999999999999999999999999999876111223111455666666667777654          4578


Q ss_pred             HHHhCCCCCcEEEEecChhhHHHHHHcCCeEE
Q 022348          248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       248 ~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                      +++++..+++|++|||+.+|+.+|+.+|+.++
T Consensus       153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a  184 (219)
T PRK09552        153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFA  184 (219)
T ss_pred             HHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence            89999999999999999999999999999543

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.79  E-value=7.5e-19  Score=137.37  Aligned_cols=96  Identities=16%  Similarity=0.226  Sum_probs=83.0

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChh------------hHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHH
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKS------------SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA  247 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~------------~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~  247 (298)
                      ++||+.++|+.|+++|++++|+||+...            .+...++.+ ++.    ++.++++++....||+|+++..+
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~-gl~----~~~ii~~~~~~~~KP~p~~~~~~  117 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL-KVP----IQVLAATHAGLYRKPMTGMWEYL  117 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc-CCC----EEEEEecCCCCCCCCccHHHHHH
Confidence            7899999999999999999999998753            356778877 774    35666666666789999999999


Q ss_pred             HHHhC--CCCCcEEEEecCh--------hhHHHHHHcCCeEEE
Q 022348          248 AKRLG--ISEKDCLVVEDSV--------IGLQAATRAGMACVI  280 (298)
Q Consensus       248 ~~~lg--i~~~~~~~vgD~~--------~Di~~a~~aG~~~v~  280 (298)
                      ++++|  +++++++||||+.        +|+++|+++|+.+++
T Consensus       118 ~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664       118 QSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             HHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence            99999  9999999999996        699999999999864

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.77  E-value=1.8e-17  Score=135.00  Aligned_cols=99  Identities=17%  Similarity=0.144  Sum_probs=78.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCC----CCCCCCCHHHHHHHHHHhCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD----VKQKKPDPSIYVTAAKRLGI  253 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~----~~~~KP~~~~~~~~~~~lgi  253 (298)
                      ..++||+.++|..|+++ ++++|+||+....++..++++ ++..+  |+..+..++    .+..++.|.....++++++.
T Consensus        67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~-gl~~~--f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~  142 (205)
T PRK13582         67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL-GWPTL--FCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS  142 (205)
T ss_pred             CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc-CCchh--hcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence            47899999999999999 999999999999999999998 98877  554333221    12223344455667777777


Q ss_pred             CCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          254 SEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       254 ~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      .+++|++|||+.+|+++++++|+.+.+
T Consensus       143 ~~~~~v~iGDs~~D~~~~~aa~~~v~~  169 (205)
T PRK13582        143 LGYRVIAAGDSYNDTTMLGEADAGILF  169 (205)
T ss_pred             hCCeEEEEeCCHHHHHHHHhCCCCEEE
Confidence            789999999999999999999997643

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.76  E-value=5.4e-18  Score=128.58  Aligned_cols=101  Identities=30%  Similarity=0.484  Sum_probs=91.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCC----------------CCCH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK----------------KPDP  241 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~----------------KP~~  241 (298)
                      ..++|++.++|+.|+++|++++++||+....+...++.+ ++..+  ++.++..+.....                ||++
T Consensus        23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~-~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (139)
T cd01427          23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL-GLDDY--FDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP   99 (139)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc-CCchh--hhheeccchhhhhcccccccccccccccCCCCH
Confidence            479999999999999999999999999999999999988 88766  7888877655544                9999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       242 ~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      ..+..++++++..++++++|||+.+|+++++.+|+.++++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         100 DKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             HHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            9999999999999999999999999999999999998763

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.76  E-value=5.2e-17  Score=131.73  Aligned_cols=105  Identities=26%  Similarity=0.280  Sum_probs=87.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCC-------CC---CCCCCHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD-------VK---QKKPDPSIYVTA  247 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~-------~~---~~KP~~~~~~~~  247 (298)
                      ..++||+.++++.|+++|++++|+|++....++.+.+.+ |++..  +...+..++       .+   .++-+......+
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l-g~d~~--~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~  152 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL-GIDYV--VANELEIDDGKLTGRVVGPICDGEGKAKALREL  152 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh-CCchh--eeeEEEEeCCEEeceeeeeecCcchHHHHHHHH
Confidence            579999999999999999999999999999999999998 99876  444443333       11   223356788899


Q ss_pred             HHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       248 ~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      ++++|++++++++|||+.||+.|.+.+|.+.++...+.
T Consensus       153 ~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~  190 (212)
T COG0560         153 AAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK  190 (212)
T ss_pred             HHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH
Confidence            99999999999999999999999999999976655543

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.75  E-value=7.3e-17  Score=130.29  Aligned_cols=106  Identities=16%  Similarity=0.144  Sum_probs=81.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcc--eEE------eCCCCCCCCCCHHHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD--CFL------AGDDVKQKKPDPSIYVTAAK  249 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd--~v~------~~~~~~~~KP~~~~~~~~~~  249 (298)
                      +.++||+.++++.|+++| +++|+|++....+..+++.+ |++.+  |.  ..+      ++... ..+|.+..+...++
T Consensus        67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l-gi~~~--~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~l~  141 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL-GFPTL--LCHKLEIDDSDRVVGYQL-RQKDPKRQSVIAFK  141 (203)
T ss_pred             CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc-CCchh--hceeeEEecCCeeECeee-cCcchHHHHHHHHH
Confidence            479999999999999985 99999999999999999998 99877  44  222      22222 34555555454556


Q ss_pred             HhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhh
Q 022348          250 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR  291 (298)
Q Consensus       250 ~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~  291 (298)
                      +.|.   +|++|||+.||+.+++.+|.++++...+...++-.
T Consensus       142 ~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~  180 (203)
T TIGR02137       142 SLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFP  180 (203)
T ss_pred             hhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCC
Confidence            6664   79999999999999999999988776665554433

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.74  E-value=8.8e-17  Score=129.06  Aligned_cols=95  Identities=13%  Similarity=0.092  Sum_probs=79.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCC--------------------CCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD--------------------VKQK  237 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~--------------------~~~~  237 (298)
                      ..++||+.++|+.|+++|++++|+||+....++..++.+ ++..+  |+.+++++.                    ...+
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g  147 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI-GEKDV--FIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG  147 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc-CChhh--eeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence            479999999999999999999999999999999999888 88887  888886532                    1233


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeE
Q 022348          238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC  278 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~  278 (298)
                      .+++.+++.+.++.   +++++||||+.+|+++|+.+++-+
T Consensus       148 ~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~  185 (188)
T TIGR01489       148 CCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF  185 (188)
T ss_pred             CCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence            34577888887665   789999999999999999997643

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.74  E-value=4.5e-17  Score=128.24  Aligned_cols=100  Identities=20%  Similarity=0.321  Sum_probs=81.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCC-hhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAAT-KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~-~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      .++||+.++|+.|++.|++++|+||+. ...+...++.+ ++..+           ....||+|++|..+++++|+++++
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~-gl~~~-----------~~~~KP~p~~~~~~l~~~~~~~~~  110 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL-GIPVL-----------PHAVKPPGCAFRRAHPEMGLTSEQ  110 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc-CCEEE-----------cCCCCCChHHHHHHHHHcCCCHHH
Confidence            478899999999999999999999998 45555555554 55422           134699999999999999999999


Q ss_pred             EEEEecCh-hhHHHHHHcCCeEEEEc-CCCchhHh
Q 022348          258 CLVVEDSV-IGLQAATRAGMACVITY-TSSTAEQV  290 (298)
Q Consensus       258 ~~~vgD~~-~Di~~a~~aG~~~v~~~-~~~~~~~~  290 (298)
                      |+||||+. .|+++|+++|+.+|++. +..+.+.+
T Consensus       111 ~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~  145 (170)
T TIGR01668       111 VAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWF  145 (170)
T ss_pred             EEEECCcchHHHHHHHHcCCeEEEEccCcCCcccc
Confidence            99999998 69999999999999764 44444433

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.73  E-value=8.3e-18  Score=143.19  Aligned_cols=109  Identities=15%  Similarity=0.192  Sum_probs=84.2

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHH-HHHHHHhCCccccCcceEE---eCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVI-LCLENLIGMERFEGLDCFL---AGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~-~~l~~~~~l~~~~~fd~v~---~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      -++++.++++.|+++|. ++|+||.+..... ..+.. ++...+  |+.+.   ..+....+||+|.+|..+++++|+.|
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~--~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~  219 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSL--VAAIETASGRQPLVVGKPSPYMFECITENFSIDP  219 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHH--HHHHHHHhCCceeccCCCCHHHHHHHHHHhCCCh
Confidence            47899999999999887 7899998864331 11222 255554  45443   23445678999999999999999999


Q ss_pred             CcEEEEecCh-hhHHHHHHcCCeEEEE-cCCCchhHhhh
Q 022348          256 KDCLVVEDSV-IGLQAATRAGMACVIT-YTSSTAEQVRI  292 (298)
Q Consensus       256 ~~~~~vgD~~-~Di~~a~~aG~~~v~~-~~~~~~~~~~~  292 (298)
                      ++|+||||+. .|+++|+++|+.++++ ||....+++..
T Consensus       220 ~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~  258 (279)
T TIGR01452       220 ARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQE  258 (279)
T ss_pred             hhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHh
Confidence            9999999996 8999999999999955 66666776654

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.72  E-value=3.9e-16  Score=126.84  Aligned_cols=104  Identities=19%  Similarity=0.130  Sum_probs=84.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceE------EeCCC---CCCCCCCHHHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF------LAGDD---VKQKKPDPSIYVTAAK  249 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v------~~~~~---~~~~KP~~~~~~~~~~  249 (298)
                      .++||+.++++.++++|++++|+|++....++..++.+ +++.+.+.+..      +++..   ...++++...++.+++
T Consensus        87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~l-g~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~  165 (202)
T TIGR01490        87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARIL-GIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA  165 (202)
T ss_pred             hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc-CCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence            58999999999999999999999999999999999887 88876322112      22211   1234666778999999


Q ss_pred             HhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          250 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       250 ~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      +.++++++|+++||+.+|+++++.+|..+++.++
T Consensus       166 ~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~  199 (202)
T TIGR01490       166 EEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD  199 (202)
T ss_pred             HcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence            9999999999999999999999999999876554

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.72  E-value=1.7e-16  Score=129.94  Aligned_cols=99  Identities=19%  Similarity=0.197  Sum_probs=79.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc-cccCcceEEeCCCCCCCCCCHHHH----------HH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGLDCFLAGDDVKQKKPDPSIY----------VT  246 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~-~~~~fd~v~~~~~~~~~KP~~~~~----------~~  246 (298)
                      ..++||+.++++.|+++|++++|+|++....++.+++.+ +.. .+..-+.++.++.+...||.|..+          ..
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~  147 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI-VEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS  147 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhh-CCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence            579999999999999999999999999999899889887 432 221114555555556667776654          47


Q ss_pred             HHHHhCCCCCcEEEEecChhhHHHHHHcCCe
Q 022348          247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMA  277 (298)
Q Consensus       247 ~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~  277 (298)
                      ++++++..+++++||||+.+|+.+|+.||+.
T Consensus       148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~  178 (214)
T TIGR03333       148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLC  178 (214)
T ss_pred             HHHHHhhcCCcEEEEeCCHHHHHHHHhCCee
Confidence            7788888889999999999999999999983

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.71  E-value=3.8e-16  Score=124.18  Aligned_cols=95  Identities=23%  Similarity=0.191  Sum_probs=77.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCC------------CCCCCCCCHHHH
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD------------DVKQKKPDPSIY  244 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~------------~~~~~KP~~~~~  244 (298)
                      .+.++||+.++++.++++|++++|+|++....++..++.+ ++..+  |...+..+            ....+..++..+
T Consensus        71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~-g~~~~--~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l  147 (177)
T TIGR01488        71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL-GIDDV--FANRLEFDDNGLLTGPIEGQVNPEGECKGKVL  147 (177)
T ss_pred             cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCchh--eeeeEEECCCCEEeCccCCcccCCcchHHHHH
Confidence            3468999999999999999999999999999999999998 88866  44333322            112234456788


Q ss_pred             HHHHHHhCCCCCcEEEEecChhhHHHHHHc
Q 022348          245 VTAAKRLGISEKDCLVVEDSVIGLQAATRA  274 (298)
Q Consensus       245 ~~~~~~lgi~~~~~~~vgD~~~Di~~a~~a  274 (298)
                      +.+++++|++++++++|||+.+|+.+++.+
T Consensus       148 ~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       148 KELLEESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence            888899999999999999999999999864

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.70  E-value=3.1e-16  Score=135.55  Aligned_cols=101  Identities=19%  Similarity=0.285  Sum_probs=84.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCC---------------hhhHHHHHHHHhCCccccCcceEE-e----CCCCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFL-A----GDDVKQK  237 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~---------------~~~~~~~l~~~~~l~~~~~fd~v~-~----~~~~~~~  237 (298)
                      ..++||+.++|.+|+++|++++|+||.+               ...+..+++.+ ++.    |+.++ +    +++.+..
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~-gl~----fd~i~i~~~~~sd~~~~r  103 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQ-GIK----FDEVLICPHFPEDNCSCR  103 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHc-CCc----eeeEEEeCCcCcccCCCC
Confidence            3799999999999999999999999952               23344556665 663    55554 3    3566788


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      ||+|.++..+++++++.+++++||||+.+|+++|+++|+++|+++.
T Consensus       104 KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~  149 (354)
T PRK05446        104 KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR  149 (354)
T ss_pred             CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence            9999999999999999999999999999999999999999998744

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.70  E-value=4.1e-16  Score=127.83  Aligned_cols=97  Identities=18%  Similarity=0.205  Sum_probs=77.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCC----hhhHHHHHHHHhCC--ccccCcceEEeCCCCCCCCCCHHHHHHHHHHh
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT----KSSVILCLENLIGM--ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL  251 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~----~~~~~~~l~~~~~l--~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l  251 (298)
                      ..++||+.++|+.|+++|++++++||..    .......++.+ ++  ..+  |+.+++++..  .||++..   .++++
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~-gip~~~~--f~vil~gd~~--~K~~K~~---~l~~~  184 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF-HIPADNM--NPVIFAGDKP--GQYTKTQ---WLKKK  184 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc-CCCcccc--eeEEEcCCCC--CCCCHHH---HHHhc
Confidence            5799999999999999999999999964    33445555556 88  666  7888888753  5676653   55677


Q ss_pred             CCCCCcEEEEecChhhHHHHHHcCCeEE-EEcCCCc
Q 022348          252 GISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSST  286 (298)
Q Consensus       252 gi~~~~~~~vgD~~~Di~~a~~aG~~~v-~~~~~~~  286 (298)
                      |+    ++||||+.+|+.+|++||+.++ +.|+.+.
T Consensus       185 ~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~  216 (237)
T PRK11009        185 NI----RIFYGDSDNDITAAREAGARGIRILRAANS  216 (237)
T ss_pred             CC----eEEEcCCHHHHHHHHHcCCcEEEEecCCCC
Confidence            76    8999999999999999999999 6666554

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.70  E-value=1e-16  Score=120.05  Aligned_cols=88  Identities=17%  Similarity=0.147  Sum_probs=77.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCC-ChhhHHHHHHHHhC-------CccccCcceEEeCCCCCCCCCCHHHHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAA-TKSSVILCLENLIG-------MERFEGLDCFLAGDDVKQKKPDPSIYVTAAKR  250 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~-~~~~~~~~l~~~~~-------l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~  250 (298)
                      .++||+.++|+.|+++|++++|+||+ ........++.+ +       +..+  |+.++++++    +|+|++|..++++
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~-~~~~~i~~l~~~--f~~~~~~~~----~pkp~~~~~a~~~  101 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIF-EDFGIIFPLAEY--FDPLTIGYW----LPKSPRLVEIALK  101 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhc-cccccchhhHhh--hhhhhhcCC----CcHHHHHHHHHHH
Confidence            48899999999999999999999999 777777778776 6       6777  888887753    5889999999999


Q ss_pred             hC--CCCCcEEEEecChhhHHHHHH
Q 022348          251 LG--ISEKDCLVVEDSVIGLQAATR  273 (298)
Q Consensus       251 lg--i~~~~~~~vgD~~~Di~~a~~  273 (298)
                      +|  +.|++|+||||+..|++..+.
T Consensus       102 lg~~~~p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681       102 LNGVLKPKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             hcCCCCcceEEEECCCHhHHHHHHh
Confidence            99  999999999999999887654

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.69  E-value=4.2e-16  Score=127.76  Aligned_cols=89  Identities=28%  Similarity=0.417  Sum_probs=78.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .++||+.++|+.|++.|++++++|+.....+..+.+.+ |+..     .++.+...  +||++.+|..+++++++.+++|
T Consensus       127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l-gi~~-----~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v  198 (215)
T PF00702_consen  127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL-GIFD-----SIVFARVI--GKPEPKIFLRIIKELQVKPGEV  198 (215)
T ss_dssp             EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT-TSCS-----EEEEESHE--TTTHHHHHHHHHHHHTCTGGGE
T ss_pred             cchhhhhhhhhhhhccCcceeeeecccccccccccccc-cccc-----cccccccc--ccccchhHHHHHHHHhcCCCEE
Confidence            58899999999999999999999999999999999988 8843     22222211  7999999999999999999999


Q ss_pred             EEEecChhhHHHHHHcC
Q 022348          259 LVVEDSVIGLQAATRAG  275 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG  275 (298)
                      +||||+.||+.|+++||
T Consensus       199 ~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  199 AMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             EEEESSGGHHHHHHHSS
T ss_pred             EEEccCHHHHHHHHhCc
Confidence            99999999999999997

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.69  E-value=3.4e-17  Score=127.75  Aligned_cols=92  Identities=20%  Similarity=0.286  Sum_probs=80.3

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      .+..|++.|++++|+||.....++..++.+ ++..+  |+.         .||+|+.++.+++++|+++++|++|||+.+
T Consensus        42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~l-gi~~~--f~~---------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~n  109 (169)
T TIGR02726        42 GVIVLQLCGIDVAIITSKKSGAVRHRAEEL-KIKRF--HEG---------IKKKTEPYAQMLEEMNISDAEVCYVGDDLV  109 (169)
T ss_pred             HHHHHHHCCCEEEEEECCCcHHHHHHHHHC-CCcEE--Eec---------CCCCHHHHHHHHHHcCcCHHHEEEECCCHH
Confidence            466788899999999999999999999998 99877  553         279999999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcCCCchhHh
Q 022348          267 GLQAATRAGMACVITYTSSTAEQV  290 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~~~~~~~~  290 (298)
                      |+++++.+|+..++-+.....++.
T Consensus       110 Di~~~~~ag~~~am~nA~~~lk~~  133 (169)
T TIGR02726       110 DLSMMKRVGLAVAVGDAVADVKEA  133 (169)
T ss_pred             HHHHHHHCCCeEECcCchHHHHHh
Confidence            999999999998877766444443

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.69  E-value=2.8e-17  Score=127.26  Aligned_cols=86  Identities=13%  Similarity=0.217  Sum_probs=75.7

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      ++++|+++|++++|+||.....+...++.+ ++..+  |+.         .||+|+++..+++++|+++++|+||||+.+
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~-gi~~~--~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~  103 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL-GITHL--YQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLI  103 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHc-CCCEE--Eec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            799999999999999999999899999998 88776  442         278899999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcCC
Q 022348          267 GLQAATRAGMACVITYTS  284 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~~  284 (298)
                      |+++++.+|+...+.+..
T Consensus       104 D~~~~~~ag~~~~v~~~~  121 (154)
T TIGR01670       104 DWPVMEKVGLSVAVADAH  121 (154)
T ss_pred             HHHHHHHCCCeEecCCcC
Confidence            999999999985444443

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.66  E-value=3.2e-16  Score=131.64  Aligned_cols=205  Identities=13%  Similarity=0.128  Sum_probs=124.8

Q ss_pred             ccEEEEecCCccccchh----HH--HHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChh---------hHHH
Q 022348           67 LQALIFDCDGVIIESEH----LH--RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP---------KMRW  131 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---------~~~~  131 (298)
                      +|+|+||+||||++...    ..  ...+.+.+++.|++....+++.........+.+ ...|-...         ....
T Consensus         1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l-~~~g~~~~~~~i~ts~~~~~~   79 (257)
T TIGR01458         1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL-QRLGFDISEDEVFTPAPAARQ   79 (257)
T ss_pred             CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH-HHcCCCCCHHHeEcHHHHHHH
Confidence            47999999999998654    22  223344456677766655555444333333333 23333211         2345


Q ss_pred             HHHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhc--CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhH
Q 022348          132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS--GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV  209 (298)
Q Consensus       132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~  209 (298)
                      ++.+.+..   .+....  +....+ +..+..  .+. ...+-.  .....++++.+.++.|++.+.+++++||.+....
T Consensus        80 ~l~~~~~~---~~~~g~--~~~~~~-~~~~~~--~~~-~~Vv~g~~~~~~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~  150 (257)
T TIGR01458        80 LLEEKQLR---PMLLVD--DRVLPD-FDGIDT--SDP-NCVVMGLAPEHFSYQILNQAFRLLLDGAKPLLIAIGKGRYYK  150 (257)
T ss_pred             HHHhcCCC---eEEEEC--ccHHHH-hccCCC--CCC-CEEEEecccCccCHHHHHHHHHHHHcCCCCEEEEeCCCCCCc
Confidence            56554321   111000  111111 110000  000 000000  0112468899999999999999999999887766


Q ss_pred             HHHHHHHhCCccccCcceEEeCCCC---CCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCC
Q 022348          210 ILCLENLIGMERFEGLDCFLAGDDV---KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTS  284 (298)
Q Consensus       210 ~~~l~~~~~l~~~~~fd~v~~~~~~---~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~  284 (298)
                      ......+ ++..+  |+.+..+...   ..+||+|.+|+.+++++|++|++++||||+. +|+.+|+++|+.++++..+
T Consensus       151 ~~~~~~~-g~g~~--~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G  226 (257)
T TIGR01458       151 RKDGLAL-DVGPF--VTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTG  226 (257)
T ss_pred             CCCCCCC-CchHH--HHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCC
Confidence            5555444 67666  6655544332   2479999999999999999999999999997 8999999999999977554

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.66  E-value=6.2e-16  Score=133.38  Aligned_cols=100  Identities=22%  Similarity=0.224  Sum_probs=91.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc-ccCcceEEeCC-------CCCCCCCCHHHHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDCFLAGD-------DVKQKKPDPSIYVTAAKR  250 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~-~~~fd~v~~~~-------~~~~~KP~~~~~~~~~~~  250 (298)
                      .++||+.++|+.|+++|++++++||......+..++.+ ++.. +  |+.+++.+       +.+..||+|.++..++++
T Consensus       187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l-~~~~~~--f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~  263 (300)
T PHA02530        187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL-RQTDIW--FDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE  263 (300)
T ss_pred             CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH-HHcCCc--hhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence            68999999999999999999999999999999999998 8875 6  88888887       455679999999999999


Q ss_pred             hCC-CCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          251 LGI-SEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       251 lgi-~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      ++. .+++|++|||+.+|+++|+++|+.++.+
T Consensus       264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v  295 (300)
T PHA02530        264 KIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV  295 (300)
T ss_pred             HhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence            998 5799999999999999999999999966

>PRK11590 hypothetical protein; Provisional

Probab=99.65  E-value=1.5e-14  Score=118.18  Aligned_cols=188  Identities=10%  Similarity=-0.034  Sum_probs=108.4

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHH-hhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCC--CCc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAF-SHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWP--SST  142 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~--~~~  142 (298)
                      .-|+++||+||||++..  ....|...+ +++++....            ...+...+|.+......... .+..  ...
T Consensus         5 ~~k~~iFD~DGTL~~~d--~~~~~~~~~~~~~g~~~~~------------~~~~~~~ig~~l~~~~~~~~-~~~~~~~~~   69 (211)
T PRK11590          5 ERRVVFFDLDGTLHQQD--MFGSFLRYLLRRQPLNLLL------------VLPLLPVIGLGLLVKGRAAR-WPMSLLLWG   69 (211)
T ss_pred             cceEEEEecCCCCcccc--hHHHHHHHHHHhcchhhHH------------HhHHHHHhccCcccchhhhh-hhHHHHHHH
Confidence            45799999999999443  445566666 777754322            23444455554433211100 0000  000


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHH-HHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM-DEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l-~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                      .+  ...+.++    .+.+.+.+.+.|...     ..++||+.++| +.|++.|++++|+||.....++.+++.+ ++..
T Consensus        70 ~~--~g~~~~~----~~~~~~~f~~~~~~~-----~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l-~~~~  137 (211)
T PRK11590         70 CT--FGHSEAR----LQALEADFVRWFRDN-----VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDT-PWLP  137 (211)
T ss_pred             HH--cCCCHHH----HHHHHHHHHHHHHHh-----CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc-cccc
Confidence            00  0001111    223333333334332     36799999999 5788899999999999999999999887 6421


Q ss_pred             ccCcceEEeCC--------CCC-CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          222 FEGLDCFLAGD--------DVK-QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       222 ~~~fd~v~~~~--------~~~-~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                         .+.+++..        -.+ .+.-. +=...+.+.+|.+...+++.|||.+|+.+.+.+|.+.++.++.
T Consensus       138 ---~~~~i~t~l~~~~tg~~~g~~c~g~-~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~  205 (211)
T PRK11590        138 ---RVNLIASQMQRRYGGWVLTLRCLGH-EKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPRG  205 (211)
T ss_pred             ---cCceEEEEEEEEEccEECCccCCCh-HHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECccH
Confidence               12222221        111 11111 1122333445777788999999999999999999997665443

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.64  E-value=1.5e-15  Score=113.85  Aligned_cols=91  Identities=27%  Similarity=0.412  Sum_probs=79.8

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL  259 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~  259 (298)
                      .-|++.+-+.++++.|+++.|+||+....+...++.+ +++      .+.     ...||.+..|+.+++++++++++|+
T Consensus        47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l-~v~------fi~-----~A~KP~~~~fr~Al~~m~l~~~~vv  114 (175)
T COG2179          47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL-GVP------FIY-----RAKKPFGRAFRRALKEMNLPPEEVV  114 (175)
T ss_pred             CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc-CCc------eee-----cccCccHHHHHHHHHHcCCChhHEE
Confidence            5567778888999999999999999999898888877 664      332     3579999999999999999999999


Q ss_pred             EEecCh-hhHHHHHHcCCeEEEEc
Q 022348          260 VVEDSV-IGLQAATRAGMACVITY  282 (298)
Q Consensus       260 ~vgD~~-~Di~~a~~aG~~~v~~~  282 (298)
                      ||||.. .|+.++..+|+.||.+-
T Consensus       115 mVGDqL~TDVlggnr~G~~tIlV~  138 (175)
T COG2179         115 MVGDQLFTDVLGGNRAGMRTILVE  138 (175)
T ss_pred             EEcchhhhhhhcccccCcEEEEEE
Confidence            999999 59999999999999664

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.60  E-value=7.5e-15  Score=124.88  Aligned_cols=207  Identities=12%  Similarity=0.150  Sum_probs=109.6

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHH---hhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcC---C-
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAF---SHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHG---W-  138 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g---~-  138 (298)
                      ++|+|+||+||||++..........+++   ++.|+.....++|.+.......+.+    +...+    +...+|   + 
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l----~~~~~----~I~~NGa~i~d   73 (272)
T PRK10530          2 TYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQAL----ALDTP----AICCNGTYLYD   73 (272)
T ss_pred             CccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc----CCCCC----EEEcCCcEEEe
Confidence            5899999999999987543323333444   4468888887777655433333222    11100    000011   0 


Q ss_pred             -CCCcccCCCCCCChhHHHHHHHHHHHHH----------------HHHHH---HHh---cCCCCCChhHHHHHHHHHHCC
Q 022348          139 -PSSTIFDNPPVTDDDQAKLIDLIQDWKT----------------ERYQQ---IIK---SGTVEPRPGVLRLMDEAKAAG  195 (298)
Q Consensus       139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~---~~~---~~~~~~~pg~~~~l~~L~~~g  195 (298)
                       ...+++.....+.+...++++.+.+...                ..+..   ...   ......++++.+++..++..+
T Consensus        74 ~~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
T PRK10530         74 YQAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVN  153 (272)
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcC
Confidence             0112223333444444444443332100                00000   000   001123566777777777777


Q ss_pred             CeEEEEeCCCh-hhHHHHHHHH---hCCcccc-CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHH
Q 022348          196 KKVAVCSAATK-SSVILCLENL---IGMERFE-GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQA  270 (298)
Q Consensus       196 ~~i~i~S~~~~-~~~~~~l~~~---~~l~~~~-~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~  270 (298)
                      ..+.++++... .......+.+   .++.... .++. +  +....+..++.+++.+++++|++++++++|||+.||++|
T Consensus       154 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~--ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m  230 (272)
T PRK10530        154 AIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQ-V--DIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISM  230 (272)
T ss_pred             CcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCce-E--EEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHH
Confidence            66667776442 1122222222   1332100 0111 1  122334456789999999999999999999999999999


Q ss_pred             HHHcCCeEEEEcC
Q 022348          271 ATRAGMACVITYT  283 (298)
Q Consensus       271 a~~aG~~~v~~~~  283 (298)
                      ++.+|+.+++-++
T Consensus       231 ~~~ag~~vamgna  243 (272)
T PRK10530        231 LEAAGLGVAMGNA  243 (272)
T ss_pred             HHhcCceEEecCc
Confidence            9999998666544

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.59  E-value=5.1e-15  Score=123.84  Aligned_cols=110  Identities=17%  Similarity=0.152  Sum_probs=75.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHH--HHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL--CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~--~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      ..++.+...+..|+ +|.+ .++||.+......  .+-..+.+...  ++...+.+.+..+||+|++|+.+++++|++++
T Consensus       121 ~~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~--i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~  196 (249)
T TIGR01457       121 IDYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITV--LEVATGVKPVYIGKPNAIIMEKAVEHLGTERE  196 (249)
T ss_pred             CCHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHH--HHHHhCCCccccCCChHHHHHHHHHHcCCCcc
Confidence            34556666677774 5776 8888977653311  00000011111  34444556666789999999999999999999


Q ss_pred             cEEEEecCh-hhHHHHHHcCCeEEEEc-CCCchhHhhh
Q 022348          257 DCLVVEDSV-IGLQAATRAGMACVITY-TSSTAEQVRI  292 (298)
Q Consensus       257 ~~~~vgD~~-~Di~~a~~aG~~~v~~~-~~~~~~~~~~  292 (298)
                      +++||||+. .|+.+|+++|+.++++. |....+++..
T Consensus       197 ~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~  234 (249)
T TIGR01457       197 ETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAG  234 (249)
T ss_pred             cEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhc
Confidence            999999997 79999999999999664 4444555544

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.58  E-value=9.2e-14  Score=106.57  Aligned_cols=165  Identities=18%  Similarity=0.206  Sum_probs=111.6

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcc
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI  143 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~  143 (298)
                      +.+.++|.||+|.|++..     +.+.++....|+             .+...+......++...++..+.+.       
T Consensus        13 ~~~~~aVcFDvDSTvi~e-----EgIdelA~~~G~-------------~~~Va~~T~rAMng~~~F~eaL~~R-------   67 (227)
T KOG1615|consen   13 WRSADAVCFDVDSTVIQE-----EGIDELAAYCGV-------------GEAVAEVTRRAMNGEADFQEALAAR-------   67 (227)
T ss_pred             HHhcCeEEEecCcchhHH-----hhHHHHHHHhCc-------------hHHHHHHHHHHhCCCCcHHHHHHHH-------
Confidence            346799999999999943     344555555564             3334455555566666666665432       


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc--
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER--  221 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~--  221 (298)
                                     -.+.+-........+......+.||+.++...|+++|.+++++|+++...+..+.+++ |++.  
T Consensus        68 ---------------l~llqp~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L-gi~~~n  131 (227)
T KOG1615|consen   68 ---------------LSLLQPLQVQVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL-GIPKSN  131 (227)
T ss_pred             ---------------HHHhcccHHHHHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh-CCcHhh
Confidence                           1122222233334444567889999999999999999999999999999999999998 9985  


Q ss_pred             c------cCcceEEeC-CC-----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHH
Q 022348          222 F------EGLDCFLAG-DD-----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATR  273 (298)
Q Consensus       222 ~------~~fd~v~~~-~~-----~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~  273 (298)
                      .      +.++.-+.+ +.     -+.+|  ++.+..+.+  |..-+.++||||+.+|+++..-
T Consensus       132 ~yAN~l~fd~~Gk~~gfd~~~ptsdsggK--a~~i~~lrk--~~~~~~~~mvGDGatDlea~~p  191 (227)
T KOG1615|consen  132 IYANELLFDKDGKYLGFDTNEPTSDSGGK--AEVIALLRK--NYNYKTIVMVGDGATDLEAMPP  191 (227)
T ss_pred             hhhheeeeccCCcccccccCCccccCCcc--HHHHHHHHh--CCChheeEEecCCccccccCCc
Confidence            1      111222222 11     11234  557777766  7777899999999999998766

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.58  E-value=8e-15  Score=122.38  Aligned_cols=98  Identities=19%  Similarity=0.257  Sum_probs=80.8

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceE--EeCCCCCCCCCCHHHHHHHHHHhCCC-CCc
Q 022348          181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF--LAGDDVKQKKPDPSIYVTAAKRLGIS-EKD  257 (298)
Q Consensus       181 ~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v--~~~~~~~~~KP~~~~~~~~~~~lgi~-~~~  257 (298)
                      ++++.++++.|+++|+++ |+||.+.......+..+ +...+  |..+  .+++....+||+|.+|+.+++++|.. +++
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~-~~g~~--~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~  215 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRY-GAGYY--AELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNR  215 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEe-cccHH--HHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCccc
Confidence            689999999999999997 88999887665555554 66665  5544  45555568999999999999999975 578


Q ss_pred             EEEEecC-hhhHHHHHHcCCeEEEEc
Q 022348          258 CLVVEDS-VIGLQAATRAGMACVITY  282 (298)
Q Consensus       258 ~~~vgD~-~~Di~~a~~aG~~~v~~~  282 (298)
                      |+||||+ .+|+.+|+++|+.++++.
T Consensus       216 ~~~vGD~~~~Di~~a~~~G~~~i~v~  241 (242)
T TIGR01459       216 MLMVGDSFYTDILGANRLGIDTALVL  241 (242)
T ss_pred             EEEECCCcHHHHHHHHHCCCeEEEEe
Confidence            9999999 589999999999999764

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.58  E-value=7.3e-15  Score=117.10  Aligned_cols=82  Identities=15%  Similarity=0.271  Sum_probs=71.8

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      .++.|+++|++++|+||.....+...++.+ ++..+  |+    +     .++++..+..+++++|+++++|+||||+.+
T Consensus        56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l-gl~~~--f~----g-----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~  123 (183)
T PRK09484         56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTL-GITHL--YQ----G-----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLI  123 (183)
T ss_pred             HHHHHHHCCCEEEEEeCCCcHHHHHHHHHc-CCcee--ec----C-----CCcHHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence            566777899999999999999999999998 88766  44    1     356789999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEE
Q 022348          267 GLQAATRAGMACVI  280 (298)
Q Consensus       267 Di~~a~~aG~~~v~  280 (298)
                      |+++++++|+.+++
T Consensus       124 D~~~a~~aG~~~~v  137 (183)
T PRK09484        124 DWPVMEKVGLSVAV  137 (183)
T ss_pred             HHHHHHHCCCeEec
Confidence            99999999999654

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.55  E-value=9.5e-15  Score=112.37  Aligned_cols=95  Identities=21%  Similarity=0.193  Sum_probs=86.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc-ccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~-~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      ..++||+.++|.+|+ ++++++|+|++....++.+++.+ ++.. +  |+.+++++++...||.   |.++++++|++|+
T Consensus        44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l-~~~~~~--f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~  116 (148)
T smart00577       44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLL-DPKKYF--GYRRLFRDECVFVKGK---YVKDLSLLGRDLS  116 (148)
T ss_pred             EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHh-CcCCCE--eeeEEECccccccCCe---EeecHHHcCCChh
Confidence            478999999999999 56999999999999999999998 7754 4  6999999999989987   8999999999999


Q ss_pred             cEEEEecChhhHHHHHHcCCeEE
Q 022348          257 DCLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                      +|++|||+.+|+++++++|+.+-
T Consensus       117 ~~i~i~Ds~~~~~aa~~ngI~i~  139 (148)
T smart00577      117 NVIIIDDSPDSWPFHPENLIPIK  139 (148)
T ss_pred             cEEEEECCHHHhhcCccCEEEec
Confidence            99999999999999999998864

>TIGR01686 FkbH FkbH-like domain

Probab=99.55  E-value=4.7e-14  Score=122.39  Aligned_cols=91  Identities=13%  Similarity=0.089  Sum_probs=82.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHH----HhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN----LIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~----~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      .+++|+.++|..|+++|++++|+|++....+...++.    + ++..+  |+.+..+     +||+|+.+..+++++|+.
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~-~~~~~--f~~~~~~-----~~pk~~~i~~~~~~l~i~  102 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI-LQAED--FDARSIN-----WGPKSESLRKIAKKLNLG  102 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc-CcHHH--eeEEEEe-----cCchHHHHHHHHHHhCCC
Confidence            3688999999999999999999999999999999998    6 77766  7777554     689999999999999999


Q ss_pred             CCcEEEEecChhhHHHHHHcCCe
Q 022348          255 EKDCLVVEDSVIGLQAATRAGMA  277 (298)
Q Consensus       255 ~~~~~~vgD~~~Di~~a~~aG~~  277 (298)
                      +++++||||++.|+.++++++-.
T Consensus       103 ~~~~vfidD~~~d~~~~~~~lp~  125 (320)
T TIGR01686       103 TDSFLFIDDNPAERANVKITLPV  125 (320)
T ss_pred             cCcEEEECCCHHHHHHHHHHCCC
Confidence            99999999999999999998765

The C-terminal portion of this domain is unique to this family (by BLAST).

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.55  E-value=8e-14  Score=115.77  Aligned_cols=59  Identities=29%  Similarity=0.508  Sum_probs=50.2

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCCc-hhHhhhc
Q 022348          235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSST-AEQVRII  293 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~-~~~~~~~  293 (298)
                      -.+||.+.+|+.++++++..+++++||||+. .||.+|+++||.++++.++.. .+++...
T Consensus       187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~  247 (269)
T COG0647         187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRA  247 (269)
T ss_pred             ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhh
Confidence            4679999999999999999999999999999 599999999999996655544 5555443

>PLN02645 phosphoglycolate phosphatase

Probab=99.54  E-value=3.1e-14  Score=122.99  Aligned_cols=104  Identities=10%  Similarity=0.102  Sum_probs=75.6

Q ss_pred             HHHHHHHHCCCeEEEEeCCChhh-HHHHHHHHhCCccccCcceEEeCCCCC---CCCCCHHHHHHHHHHhCCCCCcEEEE
Q 022348          186 RLMDEAKAAGKKVAVCSAATKSS-VILCLENLIGMERFEGLDCFLAGDDVK---QKKPDPSIYVTAAKRLGISEKDCLVV  261 (298)
Q Consensus       186 ~~l~~L~~~g~~i~i~S~~~~~~-~~~~l~~~~~l~~~~~fd~v~~~~~~~---~~KP~~~~~~~~~~~lgi~~~~~~~v  261 (298)
                      .....|+.++-..+|+||.+... ....+... +...+  |+.+..+....   .+||+|.+|..+++++|+++++++||
T Consensus       177 ~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~-g~g~~--~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~V  253 (311)
T PLN02645        177 YATLCIRENPGCLFIATNRDAVTHLTDAQEWA-GAGSM--VGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMV  253 (311)
T ss_pred             HHHHHHhcCCCCEEEEeCCCCCCCCCCCCCcc-chHHH--HHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEE
Confidence            34455654333588999988643 22222232 66666  67665554322   46999999999999999999999999


Q ss_pred             ecCh-hhHHHHHHcCCeEEEE-cCCCchhHhhh
Q 022348          262 EDSV-IGLQAATRAGMACVIT-YTSSTAEQVRI  292 (298)
Q Consensus       262 gD~~-~Di~~a~~aG~~~v~~-~~~~~~~~~~~  292 (298)
                      ||+. +|+.+|+++|+.++++ +|..+.+++..
T Consensus       254 GD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~  286 (311)
T PLN02645        254 GDRLDTDILFGQNGGCKTLLVLSGVTSESMLLS  286 (311)
T ss_pred             cCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHh
Confidence            9998 8999999999999965 66666666654

>PRK10444 UMP phosphatase; Provisional

Probab=99.54  E-value=3.8e-14  Score=118.07  Aligned_cols=63  Identities=19%  Similarity=0.321  Sum_probs=53.0

Q ss_pred             eCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEE-cCCCchhHhhh
Q 022348          230 AGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVIT-YTSSTAEQVRI  292 (298)
Q Consensus       230 ~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~-~~~~~~~~~~~  292 (298)
                      +.+....+||+|++|..+++++++++++|+||||+. .|+.+|+++|+.++++ +|....+++..
T Consensus       166 g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~  230 (248)
T PRK10444        166 GRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDS  230 (248)
T ss_pred             CCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhc
Confidence            334445689999999999999999999999999997 7999999999999955 56666666654

>PRK08238 hypothetical protein; Validated

Probab=99.52  E-value=8.4e-13  Score=119.36  Aligned_cols=100  Identities=21%  Similarity=0.264  Sum_probs=81.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      ..+++||+.+++++++++|++++++|++....++.+++++ |+     ||.++++++....||+++.. .+.+.++  .+
T Consensus        70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l-Gl-----Fd~Vigsd~~~~~kg~~K~~-~l~~~l~--~~  140 (479)
T PRK08238         70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL-GL-----FDGVFASDGTTNLKGAAKAA-ALVEAFG--ER  140 (479)
T ss_pred             hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CC-----CCEEEeCCCccccCCchHHH-HHHHHhC--cc
Confidence            4567899999999999999999999999999999988887 65     79999998877777766543 3445665  35


Q ss_pred             cEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          257 DCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      +++++||+.+|+.+++.+|-..++..+..
T Consensus       141 ~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~  169 (479)
T PRK08238        141 GFDYAGNSAADLPVWAAARRAIVVGASPG  169 (479)
T ss_pred             CeeEecCCHHHHHHHHhCCCeEEECCCHH
Confidence            68999999999999999996654444443

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.51  E-value=7.7e-13  Score=110.28  Aligned_cols=102  Identities=16%  Similarity=0.168  Sum_probs=83.5

Q ss_pred             HHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceE------EeCCCCCCCCCCH--
Q 022348          170 QQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF------LAGDDVKQKKPDP--  241 (298)
Q Consensus       170 ~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v------~~~~~~~~~KP~~--  241 (298)
                      ...+....+.+.||+.++++.|+++|++++|+|++....++..++++ ++...  +..+      +..+.+..++|.|  
T Consensus       112 ~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~l-gl~~~--~~~IvSN~L~f~~dGvltG~~~P~i  188 (277)
T TIGR01544       112 KEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQA-GVYHP--NVKVVSNFMDFDEDGVLKGFKGPLI  188 (277)
T ss_pred             HHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHc-CCCCc--CceEEeeeEEECCCCeEeCCCCCcc
Confidence            33333346789999999999999999999999999999999999998 77644  4444      4344555667777  


Q ss_pred             -------HHHHHHHHHhC--CCCCcEEEEecChhhHHHHHHc
Q 022348          242 -------SIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRA  274 (298)
Q Consensus       242 -------~~~~~~~~~lg--i~~~~~~~vgD~~~Di~~a~~a  274 (298)
                             ..++..++.++  +.+++|++|||+.+|+.||..+
T Consensus       189 ~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~  230 (277)
T TIGR01544       189 HTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV  230 (277)
T ss_pred             cccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence                   67777888898  8899999999999999998776

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.49  E-value=5.7e-14  Score=116.06  Aligned_cols=91  Identities=15%  Similarity=0.153  Sum_probs=62.1

Q ss_pred             EEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCe
Q 022348          198 VAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA  277 (298)
Q Consensus       198 i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~  277 (298)
                      ..+.+......+...++.+ +.... .+......+....+.++..+++.+++++|++++++++|||+.||++|++.+|+.
T Consensus       110 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~  187 (225)
T TIGR01482       110 VKMRYGIDVDTVREIIKEL-GLNLV-AVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG  187 (225)
T ss_pred             EEEeecCCHHHHHHHHHhc-CceEE-EecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce
Confidence            3455555555566666665 44211 000001112344566778899999999999999999999999999999999999


Q ss_pred             EEEEcCCCchhHh
Q 022348          278 CVITYTSSTAEQV  290 (298)
Q Consensus       278 ~v~~~~~~~~~~~  290 (298)
                      +++-+.....++.
T Consensus       188 vam~Na~~~~k~~  200 (225)
T TIGR01482       188 VAVANAQPELKEW  200 (225)
T ss_pred             EEcCChhHHHHHh
Confidence            8777765544443

catalyze the same reaction as SPP.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.49  E-value=2.9e-14  Score=118.26  Aligned_cols=87  Identities=20%  Similarity=0.227  Sum_probs=60.7

Q ss_pred             EEEEeCCChhhHHHHHHHHhCCccccCcceEEeC---CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHc
Q 022348          198 VAVCSAATKSSVILCLENLIGMERFEGLDCFLAG---DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA  274 (298)
Q Consensus       198 i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~---~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~a  274 (298)
                      +.+.++.....+...++.+ +..    +..+...   +-...+..++.+++.+++.+|++++++++|||+.||++|++.+
T Consensus       118 ~~~~~~~~~~~~~~~l~~~-~~~----~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~a  192 (230)
T PRK01158        118 VALRRTVPVEEVRELLEEL-GLD----LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVA  192 (230)
T ss_pred             eeecccccHHHHHHHHHHc-CCc----EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhc
Confidence            4455554445555556554 321    2222211   2234556678999999999999999999999999999999999


Q ss_pred             CCeEEEEcCCCchhH
Q 022348          275 GMACVITYTSSTAEQ  289 (298)
Q Consensus       275 G~~~v~~~~~~~~~~  289 (298)
                      |+.+++-++....++
T Consensus       193 g~~vam~Na~~~vk~  207 (230)
T PRK01158        193 GFGVAVANADEELKE  207 (230)
T ss_pred             CceEEecCccHHHHH
Confidence            999877776654444

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.49  E-value=1.8e-13  Score=124.20  Aligned_cols=92  Identities=21%  Similarity=0.302  Sum_probs=79.3

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCCh------------hhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHH
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATK------------SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA  247 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~------------~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~  247 (298)
                      ++||+.+.|+.|++.|++++|+||...            ..+..+++.+ ++.    |+.+++.+.....||+|.++..+
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~l-gip----fdviia~~~~~~RKP~pGm~~~a  272 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKL-GVP----FQVFIAIGAGFYRKPLTGMWDHL  272 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHc-CCc----eEEEEeCCCCCCCCCCHHHHHHH
Confidence            689999999999999999999999766            3466777777 664    78888888778889999999999


Q ss_pred             HHHhC----CCCCcEEEEecChhhHHHHHHcCC
Q 022348          248 AKRLG----ISEKDCLVVEDSVIGLQAATRAGM  276 (298)
Q Consensus       248 ~~~lg----i~~~~~~~vgD~~~Di~~a~~aG~  276 (298)
                      +++++    +++++++||||...|+++++.+|.
T Consensus       273 ~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~  305 (526)
T TIGR01663       273 KEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK  305 (526)
T ss_pred             HHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence            99985    899999999999988887777664

Note that the EC number for the kinase function is: 2.7.1.78

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.48  E-value=1.1e-12  Score=102.05  Aligned_cols=98  Identities=28%  Similarity=0.424  Sum_probs=79.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCC---------------hhhHHHHHHHHhCCccccCcceEEeCCC-----CCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFLAGDD-----VKQKK  238 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~---------------~~~~~~~l~~~~~l~~~~~fd~v~~~~~-----~~~~K  238 (298)
                      .+.||+.+.+..|++.|++++++||.+               ...+...|+.. |+.    ||.++.+-.     ..+.|
T Consensus        31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~-gv~----id~i~~Cph~p~~~c~cRK  105 (181)
T COG0241          31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQ-GVK----IDGILYCPHHPEDNCDCRK  105 (181)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHc-CCc----cceEEECCCCCCCCCcccC
Confidence            588999999999999999999999932               12233444444 442    677766532     46789


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          239 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       239 P~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      |++.++..+++++++++++.++|||...|+++|.++|++.+.+
T Consensus       106 P~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~  148 (181)
T COG0241         106 PKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLV  148 (181)
T ss_pred             CChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEE
Confidence            9999999999999999999999999999999999999997743

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=99.45  E-value=7.1e-13  Score=102.68  Aligned_cols=108  Identities=19%  Similarity=0.311  Sum_probs=76.8

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEe-CCChhhHHHHHHHHhCCc----------cccCcceEEeCCCCCCCCCCHHHHH
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCS-AATKSSVILCLENLIGME----------RFEGLDCFLAGDDVKQKKPDPSIYV  245 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S-~~~~~~~~~~l~~~~~l~----------~~~~fd~v~~~~~~~~~KP~~~~~~  245 (298)
                      .+.+||++.++|++|+.+|++++++| +.....++..|+.+ ++.          .+  |+..-..     +-.+..-|+
T Consensus        43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l-~i~~~~~~~~~~~~~--F~~~eI~-----~gsK~~Hf~  114 (169)
T PF12689_consen   43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLL-EIDDADGDGVPLIEY--FDYLEIY-----PGSKTTHFR  114 (169)
T ss_dssp             EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHT-T-C----------CC--ECEEEES-----SS-HHHHHH
T ss_pred             EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhc-CCCccccccccchhh--cchhhee-----cCchHHHHH
Confidence            46899999999999999999999999 45677888999988 888          56  4443222     125678999


Q ss_pred             HHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhhh
Q 022348          246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI  292 (298)
Q Consensus       246 ~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~  292 (298)
                      .+.++.|++.++++||+|-..+++.....|+.|+.+.++-+.+.+.+
T Consensus       115 ~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~  161 (169)
T PF12689_consen  115 RIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFER  161 (169)
T ss_dssp             HHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHH
T ss_pred             HHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999888777654

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PTZ00445 p36-lilke protein; Provisional

Probab=99.43  E-value=7.5e-13  Score=104.23  Aligned_cols=103  Identities=16%  Similarity=0.173  Sum_probs=80.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhh---------------HHHHHHHHhCCccccCcceEEeCCC----------
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS---------------VILCLENLIGMERFEGLDCFLAGDD----------  233 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~---------------~~~~l~~~~~l~~~~~fd~v~~~~~----------  233 (298)
                      .+.|+...++.+|++.|++++|+|-++...               +...++.- +-.  ...+.+++.+.          
T Consensus        75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s-~~~--~~i~~~~~yyp~~w~~p~~y~  151 (219)
T PTZ00445         75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKS-KCD--FKIKKVYAYYPKFWQEPSDYR  151 (219)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhc-Ccc--ceeeeeeeeCCcccCChhhhh
Confidence            477888999999999999999999877643               34444432 111  11334444332          


Q ss_pred             -CCCCCCCHHH--H--HHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          234 -VKQKKPDPSI--Y--VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       234 -~~~~KP~~~~--~--~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                       ++..||+|.+  |  +.+++++|+.|++|+||+|+..++++|++.|+.++.+.++
T Consensus       152 ~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        152 PLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             hhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence             4677999999  9  9999999999999999999999999999999999977654

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.38  E-value=3.5e-11  Score=103.54  Aligned_cols=105  Identities=15%  Similarity=0.152  Sum_probs=85.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhC-------CccccCcceEEeCCCC---------------
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG-------MERFEGLDCFLAGDDV---------------  234 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~-------l~~~~~fd~v~~~~~~---------------  234 (298)
                      .+..+||+.++|+.|+++|++++|+||+....+...++.+.+       +..+  ||.|+++..-               
T Consensus       182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~y--FD~IIt~a~KP~FF~~~~pf~~v~~  259 (343)
T TIGR02244       182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDY--FDVVIVDARKPGFFTEGRPFRQVDV  259 (343)
T ss_pred             HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhh--CcEEEeCCCCCcccCCCCceEEEeC
Confidence            356799999999999999999999999999999999999746       7778  9999887531               


Q ss_pred             --CCCCCCH------------HHHHHHHHHhCCCCCcEEEEecCh-hhHHHHH-HcCCeEEEEcC
Q 022348          235 --KQKKPDP------------SIYVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYT  283 (298)
Q Consensus       235 --~~~KP~~------------~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~-~aG~~~v~~~~  283 (298)
                        +..++..            --...+.+.+|+.++++++|||+. .|+..++ .+||.++++-.
T Consensus       260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p  324 (343)
T TIGR02244       260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP  324 (343)
T ss_pred             CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence              1111111            126677888999999999999999 5999998 89999996654

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.37  E-value=5e-12  Score=107.49  Aligned_cols=50  Identities=12%  Similarity=0.043  Sum_probs=45.8

Q ss_pred             CCHHHHHHHHHHhCCCC-CcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          239 PDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       239 P~~~~~~~~~~~lgi~~-~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      .+...++.+++.+|+++ +++++|||+.||++|++.+|+.+++-++....+
T Consensus       190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k  240 (273)
T PRK00192        190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP  240 (273)
T ss_pred             CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence            56779999999999999 999999999999999999999999888876665

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.36  E-value=8.4e-13  Score=108.29  Aligned_cols=91  Identities=12%  Similarity=0.086  Sum_probs=62.1

Q ss_pred             EEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCe
Q 022348          198 VAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA  277 (298)
Q Consensus       198 i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~  277 (298)
                      +++++......+...++.. ++...  ... ..-+-...+..+..+++.+++++|++++++++|||+.||++|++.+|+.
T Consensus       110 ~~~~~~~~~~~~~~~l~~~-~~~~~--~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~  185 (215)
T TIGR01487       110 VIMREGKDVDEVREIIKER-GLNLV--DSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFK  185 (215)
T ss_pred             EEecCCccHHHHHHHHHhC-CeEEE--ecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCe
Confidence            4445555555555566554 44332  110 0012223455667799999999999999999999999999999999999


Q ss_pred             EEEEcCCCchhHhhh
Q 022348          278 CVITYTSSTAEQVRI  292 (298)
Q Consensus       278 ~v~~~~~~~~~~~~~  292 (298)
                      +++-++....++...
T Consensus       186 vam~na~~~~k~~A~  200 (215)
T TIGR01487       186 VAVANADDQLKEIAD  200 (215)
T ss_pred             EEcCCccHHHHHhCC
Confidence            888877655555443

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=99.35  E-value=1.7e-11  Score=104.09  Aligned_cols=59  Identities=14%  Similarity=0.228  Sum_probs=50.1

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhhh
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI  292 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~  292 (298)
                      ...+-.+..+++.+++.+|++++++++|||+.||++|.+.+|...++-++....++...
T Consensus       191 ~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~  249 (270)
T PRK10513        191 LDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQ  249 (270)
T ss_pred             eCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcC
Confidence            34556678899999999999999999999999999999999999888777655555443

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.35  E-value=3.8e-11  Score=98.09  Aligned_cols=100  Identities=15%  Similarity=0.140  Sum_probs=76.9

Q ss_pred             CCCCChhHHHHHHHH--HHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCC----CC----------CCCCC-
Q 022348          177 TVEPRPGVLRLMDEA--KAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD----DV----------KQKKP-  239 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L--~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~----~~----------~~~KP-  239 (298)
                      .+++.||+.++++.+  ++.|+.+.|+|+++...++.+|+.. |+...  |+.|++-.    +-          ..++. 
T Consensus        69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~-gl~~~--f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C  145 (234)
T PF06888_consen   69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH-GLRDC--FSEIFTNPACFDADGRLRVRPYHSHGCSLC  145 (234)
T ss_pred             cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC-CCccc--cceEEeCCceecCCceEEEeCccCCCCCcC
Confidence            468999999999999  4579999999999999999999998 99877  77776531    10          00111 


Q ss_pred             -----CHHHHHHHHHH---hCCCCCcEEEEecChhhHHHHHHcCCeEE
Q 022348          240 -----DPSIYVTAAKR---LGISEKDCLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       240 -----~~~~~~~~~~~---lgi~~~~~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                           +..+++.+++.   -|+.-++++||||+.||+-.+.+.+-.=+
T Consensus       146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~  193 (234)
T PF06888_consen  146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDV  193 (234)
T ss_pred             CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCE
Confidence                 23556666655   37778999999999999999988766533

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=99.32  E-value=1.4e-10  Score=88.28  Aligned_cols=103  Identities=18%  Similarity=0.298  Sum_probs=80.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHH--hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      .++||++.+.|++-++.|++++|.|.+......-.+.+-  +.+..+  |+..+.- .. -.|-...-|..+++..|++|
T Consensus       102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~l--fsGyfDt-ti-G~KrE~~SY~kIa~~iGl~p  177 (229)
T COG4229         102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSL--FSGYFDT-TI-GKKRESQSYAKIAGDIGLPP  177 (229)
T ss_pred             cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhh--hcceeec-cc-cccccchhHHHHHHhcCCCc
Confidence            479999999999999999999999999887555554432  223333  4444332 12 25667788999999999999


Q ss_pred             CcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          256 KDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      .+++|+.|+++.+.+|+.+|+.++.+..+
T Consensus       178 ~eilFLSDn~~EL~AA~~vGl~t~l~~R~  206 (229)
T COG4229         178 AEILFLSDNPEELKAAAGVGLATGLAVRP  206 (229)
T ss_pred             hheEEecCCHHHHHHHHhcchheeeeecC
Confidence            99999999999999999999999865443

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=99.30  E-value=7.1e-12  Score=106.11  Aligned_cols=59  Identities=15%  Similarity=0.175  Sum_probs=50.1

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhhh
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI  292 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~  292 (298)
                      ...+..+..+.+.+++++|++++++++|||+.||++|.+.+|..+++-++....+++..
T Consensus       184 ~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~  242 (264)
T COG0561         184 TPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD  242 (264)
T ss_pred             ecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence            34566678899999999999999999999999999999999999888777555555544

>PLN02887 hydrolase family protein

Probab=99.30  E-value=7.4e-11  Score=108.77  Aligned_cols=59  Identities=12%  Similarity=0.152  Sum_probs=50.6

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhhh
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI  292 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~  292 (298)
                      +..+-.+..+++.+++.+|++++++++|||+.||++|.+.+|+.++|-++....++...
T Consensus       502 ~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad  560 (580)
T PLN02887        502 VPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVAD  560 (580)
T ss_pred             ecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCC
Confidence            34556668899999999999999999999999999999999999888887766665444

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=99.29  E-value=6.6e-12  Score=104.25  Aligned_cols=48  Identities=25%  Similarity=0.403  Sum_probs=44.1

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcE-EEEecCh-hhHHHHHHcCCeEEEEc
Q 022348          235 KQKKPDPSIYVTAAKRLGISEKDC-LVVEDSV-IGLQAATRAGMACVITY  282 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~lgi~~~~~-~~vgD~~-~Di~~a~~aG~~~v~~~  282 (298)
                      ..+||+|.+|+.+++++++.++++ +||||+. .|+.+|+++|+.++++.
T Consensus       185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~  234 (236)
T TIGR01460       185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVL  234 (236)
T ss_pred             eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEe
Confidence            367999999999999999998887 9999999 79999999999999764

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=99.28  E-value=6.8e-11  Score=97.58  Aligned_cols=60  Identities=13%  Similarity=0.205  Sum_probs=50.6

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh-hHHHHHHcCCeEEEE-cCCCchhHhhhc
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVIT-YTSSTAEQVRII  293 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~-Di~~a~~aG~~~v~~-~~~~~~~~~~~~  293 (298)
                      ...+||++.+++.+++++++.|++|+||||+.+ ||.-+++.|++++++ .|..+.++....
T Consensus       220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~  281 (306)
T KOG2882|consen  220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEA  281 (306)
T ss_pred             eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhc
Confidence            347899999999999999999999999999996 999999999999954 555555554433

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=99.28  E-value=2.2e-11  Score=103.55  Aligned_cols=58  Identities=12%  Similarity=0.176  Sum_probs=49.2

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhh
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR  291 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~  291 (298)
                      ...+-.+..+++.+++.+|++++++++|||+.||++|.+.+|...++-++....++..
T Consensus       183 ~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A  240 (272)
T PRK15126        183 LPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAEL  240 (272)
T ss_pred             ecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhC
Confidence            3455566889999999999999999999999999999999999988877665555543

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.27  E-value=3.5e-10  Score=92.03  Aligned_cols=101  Identities=8%  Similarity=-0.048  Sum_probs=69.2

Q ss_pred             CCChhHHHHHH-HHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCC----CCC-----CCCCCHHHHHHHH
Q 022348          179 EPRPGVLRLMD-EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD----DVK-----QKKPDPSIYVTAA  248 (298)
Q Consensus       179 ~~~pg~~~~l~-~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~----~~~-----~~KP~~~~~~~~~  248 (298)
                      .++||+.++|+ .++++|++++|+||+....++.+.+.. ++..-   +.+++..    +.+     .+.-. +=...+.
T Consensus        94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~-~~~~~---~~~i~t~le~~~gg~~~g~~c~g~-~Kv~rl~  168 (210)
T TIGR01545        94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS-NFIHR---LNLIASQIERGNGGWVLPLRCLGH-EKVAQLE  168 (210)
T ss_pred             CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc-ccccc---CcEEEEEeEEeCCceEcCccCCCh-HHHHHHH
Confidence            58999999996 788899999999999999888888775 33211   2222221    101     01111 1122233


Q ss_pred             HHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          249 KRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       249 ~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +.+|.+.+.+++.|||.+|+.+...+|.+.++.+++
T Consensus       169 ~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~  204 (210)
T TIGR01545       169 QKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKRG  204 (210)
T ss_pred             HHhCCChhheEEecCCcccHHHHHhCCCcEEECcch
Confidence            345666678899999999999999999997665443

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PRK10976 putative hydrolase; Provisional

Probab=99.27  E-value=1.7e-11  Score=103.90  Aligned_cols=58  Identities=21%  Similarity=0.344  Sum_probs=50.0

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhh
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR  291 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~  291 (298)
                      ...+-.+..+++.+++.+|++++++++|||+.||++|.+.+|...++-++....++..
T Consensus       185 ~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A  242 (266)
T PRK10976        185 MAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLL  242 (266)
T ss_pred             EcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhC
Confidence            3445556889999999999999999999999999999999999988888876666654

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.24  E-value=2.4e-11  Score=82.06  Aligned_cols=56  Identities=32%  Similarity=0.577  Sum_probs=49.0

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecC-hhhHHHHHHcCCeEEEEcCCC-chhHhh
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSS-TAEQVR  291 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~-~~Di~~a~~aG~~~v~~~~~~-~~~~~~  291 (298)
                      .+||+|.+|..+++++++++++|+||||+ ..|+++|+++|+.+|++.++. ..+++.
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~   59 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLE   59 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHH
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHh
Confidence            57999999999999999999999999999 789999999999999766654 444444

...

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=99.24  E-value=3.3e-10  Score=93.30  Aligned_cols=44  Identities=16%  Similarity=0.020  Sum_probs=39.0

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          237 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       237 ~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      +-.++.+.+.+++.+|++++++++|||+.||++|.+.+|..+++
T Consensus       177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~  220 (221)
T TIGR02463       177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI  220 (221)
T ss_pred             CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence            33456689999999999999999999999999999999998653

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=99.23  E-value=2.9e-10  Score=94.92  Aligned_cols=87  Identities=20%  Similarity=0.323  Sum_probs=66.3

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhh---HHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhC
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG  252 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~---~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lg  252 (298)
                      ....++||+.++|+.|+++|++++++||+....   ....++.+ |+.... ++.++..++   .++++.-.+.+.+.++
T Consensus       115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~-Gi~~~~-~d~lllr~~---~~~K~~rr~~I~~~y~  189 (266)
T TIGR01533       115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRF-GFPQAD-EEHLLLKKD---KSSKESRRQKVQKDYE  189 (266)
T ss_pred             CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHc-CcCCCC-cceEEeCCC---CCCcHHHHHHHHhcCC
Confidence            355799999999999999999999999987443   33566666 776531 466665542   3566778888888777


Q ss_pred             CCCCcEEEEecChhhHHHH
Q 022348          253 ISEKDCLVVEDSVIGLQAA  271 (298)
Q Consensus       253 i~~~~~~~vgD~~~Di~~a  271 (298)
                      |    +++|||+.+|+...
T Consensus       190 I----vl~vGD~~~Df~~~  204 (266)
T TIGR01533       190 I----VLLFGDNLLDFDDF  204 (266)
T ss_pred             E----EEEECCCHHHhhhh
Confidence            7    89999999999653

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=99.22  E-value=1.2e-10  Score=93.75  Aligned_cols=89  Identities=18%  Similarity=0.222  Sum_probs=61.7

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCC-C---C--CCC---CCHHHHHHH---HH
Q 022348          182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD-V---K--QKK---PDPSIYVTA---AK  249 (298)
Q Consensus       182 pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~-~---~--~~K---P~~~~~~~~---~~  249 (298)
                      |++.++|+.++++|++++|+|++....++.+++.+ ++.....+..-+..+. .   +  .+.   -+...++.+   ..
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~-~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~  170 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL-GIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDE  170 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT-TSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhh
Confidence            45559999999999999999999999999999877 8875311111110000 0   0  000   134555555   33


Q ss_pred             HhCCCCCcEEEEecChhhHHHHH
Q 022348          250 RLGISEKDCLVVEDSVIGLQAAT  272 (298)
Q Consensus       250 ~lgi~~~~~~~vgD~~~Di~~a~  272 (298)
                      + ++....+++|||+.+|+.+++
T Consensus       171 ~-~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  171 E-DIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             H-THTCCEEEEEESSGGGHHHHH
T ss_pred             c-CCCCCeEEEEECCHHHHHHhC
Confidence            3 788899999999999999985

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=99.21  E-value=3.3e-10  Score=86.38  Aligned_cols=94  Identities=20%  Similarity=0.265  Sum_probs=71.2

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceE--------------EeCC--CCCCCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF--------------LAGD--DVKQKKPD  240 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v--------------~~~~--~~~~~KP~  240 (298)
                      .+.+.||..+++++++++++++.|+|++....+...++.+.|-++....|.+              +.-+  ..|..||.
T Consensus        71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~  150 (220)
T COG4359          71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS  150 (220)
T ss_pred             hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch
Confidence            3579999999999999999999999999999999999998544432112221              1111  14555654


Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCC
Q 022348          241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM  276 (298)
Q Consensus       241 ~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~  276 (298)
                            ..+++.-.++.+++.||+..|+.+|+....
T Consensus       151 ------vI~~l~e~~e~~fy~GDsvsDlsaaklsDl  180 (220)
T COG4359         151 ------VIHELSEPNESIFYCGDSVSDLSAAKLSDL  180 (220)
T ss_pred             ------hHHHhhcCCceEEEecCCcccccHhhhhhh
Confidence                  556666677889999999999999987654

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.19  E-value=3.6e-10  Score=96.01  Aligned_cols=51  Identities=8%  Similarity=-0.081  Sum_probs=44.5

Q ss_pred             CCCCCCCHHHHHHHHHHhCC---CCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          234 VKQKKPDPSIYVTAAKRLGI---SEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi---~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      ...+-.+..+.+.+++.+|+   ++++++.|||+.||++|.+.+|..++|-+..
T Consensus       182 ~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~  235 (271)
T PRK03669        182 LDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLN  235 (271)
T ss_pred             ecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCC
Confidence            44556678899999999999   9999999999999999999999998776544

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=99.19  E-value=1.7e-11  Score=91.16  Aligned_cols=86  Identities=16%  Similarity=0.287  Sum_probs=72.8

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      -++.|.+.|++++|+|+.+...++...+.+ |+..+  |-    +     .+-+-..|..+++++++.+++|.||||..+
T Consensus        43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~L-GI~~~--~q----G-----~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~  110 (170)
T COG1778          43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDL-GIKHL--YQ----G-----ISDKLAAFEELLKKLNLDPEEVAYVGDDLV  110 (170)
T ss_pred             HHHHHHHcCCeEEEEeCCCCHHHHHHHHHc-CCcee--ee----c-----hHhHHHHHHHHHHHhCCCHHHhhhhcCccc
Confidence            356677889999999999999999999998 88765  22    1     234578999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcCC
Q 022348          267 GLQAATRAGMACVITYTS  284 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~~  284 (298)
                      |+...+..|..+.+-...
T Consensus       111 Dlpvm~~vGls~a~~dAh  128 (170)
T COG1778         111 DLPVMEKVGLSVAVADAH  128 (170)
T ss_pred             cHHHHHHcCCcccccccC
Confidence            999999999997654444

>TIGR01684 viral_ppase viral phosphatase

Probab=99.19  E-value=8.9e-11  Score=97.67  Aligned_cols=58  Identities=17%  Similarity=0.363  Sum_probs=54.4

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHH
Q 022348          182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS  242 (298)
Q Consensus       182 pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~  242 (298)
                      ||+.++|++|+++|++++|+|++....+...++.+ |+..+  |+.++++++....||+|+
T Consensus       149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l-GLd~Y--FdvIIs~Gdv~~~kp~~e  206 (301)
T TIGR01684       149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV-KLDRY--FDIIISGGHKAEEYSTMS  206 (301)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc-CCCcc--cCEEEECCccccCCCCcc
Confidence            89999999999999999999999999999999998 99988  999999999888888775

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=99.19  E-value=1.1e-10  Score=90.47  Aligned_cols=95  Identities=21%  Similarity=0.329  Sum_probs=66.2

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCCh--------------hhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHH
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATK--------------SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV  245 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~--------------~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~  245 (298)
                      +.|++.+.|++|.+.|+.++|+||...              ..+..+++.+ ++.    +..+++...-...||.+-+++
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l-~ip----~~~~~a~~~d~~RKP~~GM~~  104 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKEL-GIP----IQVYAAPHKDPCRKPNPGMWE  104 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHC-TS-----EEEEECGCSSTTSTTSSHHHH
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHc-CCc----eEEEecCCCCCCCCCchhHHH
Confidence            446899999999999999999999631              1222334443 443    334444344468999999999


Q ss_pred             HHHHHhC----CCCCcEEEEecC-----------hhhHHHHHHcCCeEE
Q 022348          246 TAAKRLG----ISEKDCLVVEDS-----------VIGLQAATRAGMACV  279 (298)
Q Consensus       246 ~~~~~lg----i~~~~~~~vgD~-----------~~Di~~a~~aG~~~v  279 (298)
                      .++++++    ++.++++||||.           -.|.+-|.++|++..
T Consensus       105 ~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~  153 (159)
T PF08645_consen  105 FALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY  153 (159)
T ss_dssp             HHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred             HHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence            9999987    488999999996           579999999999853

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=99.18  E-value=3.3e-10  Score=87.53  Aligned_cols=93  Identities=17%  Similarity=0.215  Sum_probs=64.9

Q ss_pred             CChhHHHHHHHHHHCCC--eEEEEeCCC-------hhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHH
Q 022348          180 PRPGVLRLMDEAKAAGK--KVAVCSAAT-------KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKR  250 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~--~i~i~S~~~-------~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~  250 (298)
                      +.|.+.+.++++++.+.  ++.|+||+.       ...++..-+.+ |+.-+      ..    ...||  ..+..+++.
T Consensus        60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l-gIpvl------~h----~~kKP--~~~~~i~~~  126 (168)
T PF09419_consen   60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL-GIPVL------RH----RAKKP--GCFREILKY  126 (168)
T ss_pred             CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh-CCcEE------Ee----CCCCC--ccHHHHHHH
Confidence            44455566666666655  599999983       44455444444 65422      11    14576  567777777


Q ss_pred             hCC-----CCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCC
Q 022348          251 LGI-----SEKDCLVVEDSV-IGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       251 lgi-----~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~  285 (298)
                      ++.     .|+++++|||.. .|+.+|...|+.+||+..+.
T Consensus       127 ~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv  167 (168)
T PF09419_consen  127 FKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV  167 (168)
T ss_pred             HhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence            654     499999999999 69999999999999887764

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=99.18  E-value=5.6e-10  Score=93.63  Aligned_cols=50  Identities=18%  Similarity=0.131  Sum_probs=42.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          232 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       232 ~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      +..+.+.++..+++.+++++|+++++|++|||+.||++|++.+|..++.+
T Consensus       160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~  209 (249)
T TIGR01485       160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIV  209 (249)
T ss_pred             EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEE
Confidence            34567788899999999999999999999999999999999965444443

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=99.16  E-value=2.7e-10  Score=94.79  Aligned_cols=58  Identities=14%  Similarity=0.079  Sum_probs=48.9

Q ss_pred             CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHh
Q 022348          233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQV  290 (298)
Q Consensus       233 ~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~  290 (298)
                      ..+.+++++.+++.+++++|++++++++|||+.||+.|++.+|...++-+.....++.
T Consensus       153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~  210 (236)
T TIGR02471       153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGL  210 (236)
T ss_pred             EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHh
Confidence            3557788899999999999999999999999999999999999998766554444443

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=99.14  E-value=1.3e-09  Score=94.62  Aligned_cols=50  Identities=22%  Similarity=0.195  Sum_probs=42.9

Q ss_pred             CCCCCCHHHHHHHHHHh--------CC-----CCCcEEEEecCh-hhHHHHHHcCCeEEEEcCC
Q 022348          235 KQKKPDPSIYVTAAKRL--------GI-----SEKDCLVVEDSV-IGLQAATRAGMACVITYTS  284 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~l--------gi-----~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~  284 (298)
                      ..+||++.+|+.+++.+        ++     ++++++||||++ .|+.+|+++||.++++.++
T Consensus       230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG  293 (321)
T TIGR01456       230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTG  293 (321)
T ss_pred             EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEeccc
Confidence            35899999999998887        43     347999999999 7999999999999976654

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=99.12  E-value=1.9e-09  Score=90.90  Aligned_cols=50  Identities=20%  Similarity=0.260  Sum_probs=43.9

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      ...+-.+..+++.+++.+|++++++++|||+.||++|++.+|+.+++.++
T Consensus       183 ~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na  232 (256)
T TIGR00099       183 TAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNA  232 (256)
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCc
Confidence            34555678899999999999999999999999999999999999877544

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=99.00  E-value=3e-10  Score=88.52  Aligned_cols=107  Identities=11%  Similarity=0.134  Sum_probs=89.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc-ccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~-~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      +..+||+.++|++|.+. +.++|.|++....++.+++.+ +... +  |+.++..+.....+++   |.+.++.+|.+++
T Consensus        41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l-dp~~~~--f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~  113 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL-DRGGKV--ISRRLYRESCVFTNGK---YVKDLSLVGKDLS  113 (162)
T ss_pred             EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH-CcCCCE--EeEEEEccccEEeCCC---EEeEchhcCCChh
Confidence            46899999999999998 999999999999999999998 6654 5  7888888776655655   6677888999999


Q ss_pred             cEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhh
Q 022348          257 DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR  291 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~  291 (298)
                      ++++|||++.++.++..+|+.+....+.....+|.
T Consensus       114 ~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~  148 (162)
T TIGR02251       114 KVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELL  148 (162)
T ss_pred             hEEEEeCChhhhccCccCEeecCCCCCCCCHHHHH
Confidence            99999999999999999999987555555555543

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.00  E-value=1.2e-08  Score=80.38  Aligned_cols=103  Identities=16%  Similarity=0.210  Sum_probs=73.3

Q ss_pred             CCCCChhHHHHHHHHHHCCC-eEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCC----CCC-----------CCC--
Q 022348          177 TVEPRPGVLRLMDEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD----DVK-----------QKK--  238 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~-~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~----~~~-----------~~K--  238 (298)
                      .+++.||+.++++.+++.|. .+.|+|..+.-.++.+|+.+ ++..+  |+.|++--    +-|           .++  
T Consensus        82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~-~~~d~--F~~IfTNPa~~da~G~L~v~pyH~~hsC~~C  158 (256)
T KOG3120|consen   82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA-GIHDL--FSEIFTNPACVDASGRLLVRPYHTQHSCNLC  158 (256)
T ss_pred             cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc-cHHHH--HHHHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence            45899999999999999996 99999999999999999999 99988  77776531    100           011  


Q ss_pred             C----CHHHHHHHHHH---hCCCCCcEEEEecChhhHHHHHHc-CCeEEEEc
Q 022348          239 P----DPSIYVTAAKR---LGISEKDCLVVEDSVIGLQAATRA-GMACVITY  282 (298)
Q Consensus       239 P----~~~~~~~~~~~---lgi~~~~~~~vgD~~~Di~~a~~a-G~~~v~~~  282 (298)
                      |    +..++..+...   -|+.-++.+||||+.||+-..... +..+++--
T Consensus       159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR  210 (256)
T KOG3120|consen  159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR  210 (256)
T ss_pred             chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc
Confidence            1    11233333322   378888999999999998765543 44444433

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=98.99  E-value=4.7e-09  Score=88.43  Aligned_cols=59  Identities=8%  Similarity=-0.045  Sum_probs=48.7

Q ss_pred             CCCCCCHHHHHHHHHHhCCC--CCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhhhc
Q 022348          235 KQKKPDPSIYVTAAKRLGIS--EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRII  293 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~lgi~--~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~~  293 (298)
                      +..-.+....+.+++.+|++  .+++++|||+.||++|.+.+|..+++-+.....+++++.
T Consensus       172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~  232 (256)
T TIGR01486       172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPG  232 (256)
T ss_pred             cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCcc
Confidence            34556678899999999999  999999999999999999999998887776433444543

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=98.99  E-value=5.9e-10  Score=93.33  Aligned_cols=53  Identities=19%  Similarity=0.193  Sum_probs=44.4

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      ..-.+..+.+.+++.+|++++++++|||+.||++|.+.+|..+++-++....+
T Consensus       183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k  235 (254)
T PF08282_consen  183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELK  235 (254)
T ss_dssp             TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHH
T ss_pred             CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHH
Confidence            44455789999999999999999999999999999999999987766554433

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.97  E-value=4.3e-09  Score=87.85  Aligned_cols=81  Identities=22%  Similarity=0.367  Sum_probs=65.7

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCC-----------------------
Q 022348          182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKK-----------------------  238 (298)
Q Consensus       182 pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~K-----------------------  238 (298)
                      |++.++|++|+++|++++|+||+....+...++.+ ++..+  |+.+++++......                       
T Consensus       151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l-gL~~y--FDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~  227 (303)
T PHA03398        151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET-KLEGY--FDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDV  227 (303)
T ss_pred             hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc-CCCcc--ccEEEECCCcccccccceeecccceeEEecCceeEeC
Confidence            79999999999999999999999999999999998 99988  89888876532111                       


Q ss_pred             ------C-CHHHHHHHHHHhCCCC-CcEEEEecCh
Q 022348          239 ------P-DPSIYVTAAKRLGISE-KDCLVVEDSV  265 (298)
Q Consensus       239 ------P-~~~~~~~~~~~lgi~~-~~~~~vgD~~  265 (298)
                            | +|.+....+++.|+.- +.+--|+|-.
T Consensus       228 ~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~  262 (303)
T PHA03398        228 TDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK  262 (303)
T ss_pred             CcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence                  1 4667777888888874 6667777776

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.90  E-value=7.1e-09  Score=96.79  Aligned_cols=90  Identities=17%  Similarity=0.176  Sum_probs=72.9

Q ss_pred             CCCChhHHHHHHHHHHCC-CeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g-~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      -.++||+.++|++|+++| ++++++||.....+...++++ |+..+  |..+       .+++++    .++++++..++
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l-gi~~~--f~~~-------~p~~K~----~~v~~l~~~~~  448 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL-GIDEV--HAEL-------LPEDKL----AIVKELQEEGG  448 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh-CCCee--eccC-------CHHHHH----HHHHHHHHcCC
Confidence            369999999999999999 999999999999999999998 99776  5432       112223    35555555677


Q ss_pred             cEEEEecChhhHHHHHHcCCeEEEE
Q 022348          257 DCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      +|+||||+.||+.+++++|+.+.+.
T Consensus       449 ~v~~vGDg~nD~~al~~A~vgia~g  473 (556)
T TIGR01525       449 VVAMVGDGINDAPALAAADVGIAMG  473 (556)
T ss_pred             EEEEEECChhHHHHHhhCCEeEEeC
Confidence            9999999999999999999776554

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.90  E-value=7.1e-09  Score=86.57  Aligned_cols=91  Identities=14%  Similarity=0.235  Sum_probs=75.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHH--HHHHHHhCCcc-ccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI--LCLENLIGMER-FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~--~~l~~~~~l~~-~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      ..++||+.++|++|+++|++++++||+......  ..++.+ |+.. .  |+.|+++++...     ..+..+++++|+.
T Consensus        23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~-gl~~~~--~~~Ii~s~~~~~-----~~l~~~~~~~~~~   94 (242)
T TIGR01459        23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL-GINADL--PEMIISSGEIAV-----QMILESKKRFDIR   94 (242)
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC-CCCccc--cceEEccHHHHH-----HHHHhhhhhccCC
Confidence            368999999999999999999999998877555  678887 8876 6  899998865432     4677777888999


Q ss_pred             CCcEEEEecChhhHHHHHHcCC
Q 022348          255 EKDCLVVEDSVIGLQAATRAGM  276 (298)
Q Consensus       255 ~~~~~~vgD~~~Di~~a~~aG~  276 (298)
                      ++++++|||+..|++.....|.
T Consensus        95 ~~~~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        95 NGIIYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             CceEEEeCCcccchhhhcCCCc
Confidence            9999999999999887766654

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=98.87  E-value=5.8e-08  Score=79.98  Aligned_cols=43  Identities=7%  Similarity=0.016  Sum_probs=35.8

Q ss_pred             CCCHHHHHHHHHHhCC--CCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          238 KPDPSIYVTAAKRLGI--SEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi--~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      -.+....+.+++.+++  .++++++|||+.||+.|.+.+|+.+++
T Consensus       180 ~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v  224 (225)
T TIGR02461       180 SDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV  224 (225)
T ss_pred             CCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence            3346688888888866  677999999999999999999998653

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=98.82  E-value=2.6e-08  Score=77.77  Aligned_cols=48  Identities=23%  Similarity=0.470  Sum_probs=44.5

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChh-hHHHHHHcCCeEEEEcC
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYT  283 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~-Di~~a~~aG~~~v~~~~  283 (298)
                      .+||+|.+|+.+++-+|++|++++||||..+ |+-+|++.||..|.+-.
T Consensus       179 vGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkT  227 (262)
T KOG3040|consen  179 VGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKT  227 (262)
T ss_pred             ecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeec
Confidence            5789999999999999999999999999996 99999999999996644

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=98.82  E-value=6.8e-08  Score=89.52  Aligned_cols=44  Identities=5%  Similarity=-0.049  Sum_probs=39.5

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEE--ecChhhHHHHHHcCCeEEE
Q 022348          237 KKPDPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       237 ~KP~~~~~~~~~~~lgi~~~~~~~v--gD~~~Di~~a~~aG~~~v~  280 (298)
                      .-.+..+.+.+++.+|++.++++.|  ||+.||+.|.+.+|...++
T Consensus       611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM  656 (694)
T PRK14502        611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV  656 (694)
T ss_pred             CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence            4456789999999999999999999  9999999999999999765

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.81  E-value=1.5e-08  Score=94.06  Aligned_cols=89  Identities=21%  Similarity=0.275  Sum_probs=72.8

Q ss_pred             CCChhHHHHHHHHHHCCC-eEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          179 EPRPGVLRLMDEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~-~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      .++||+.+++++|+++|+ +++++||.....++..++++ |++.+  |..+.       +.++    ..++++++...++
T Consensus       362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l-gi~~~--f~~~~-------p~~K----~~~i~~l~~~~~~  427 (536)
T TIGR01512       362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL-GIDEV--HAELL-------PEDK----LEIVKELREKYGP  427 (536)
T ss_pred             cchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc-CChhh--hhccC-------cHHH----HHHHHHHHhcCCE
Confidence            589999999999999999 99999999999999999998 99876  54321       2222    3355666666689


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEE
Q 022348          258 CLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      ++||||+.||+.+++.+|+...+.
T Consensus       428 v~~vGDg~nD~~al~~A~vgia~g  451 (536)
T TIGR01512       428 VAMVGDGINDAPALAAADVGIAMG  451 (536)
T ss_pred             EEEEeCCHHHHHHHHhCCEEEEeC
Confidence            999999999999999999865443

.

>PLN02382 probable sucrose-phosphatase

Probab=98.76  E-value=2.8e-07  Score=82.52  Aligned_cols=55  Identities=16%  Similarity=0.106  Sum_probs=45.0

Q ss_pred             CCCCCCHHHHHHHHHHh---CCCCCcEEEEecChhhHHHHHHcC-CeEEEEcCCCchhH
Q 022348          235 KQKKPDPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAG-MACVITYTSSTAEQ  289 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~l---gi~~~~~~~vgD~~~Di~~a~~aG-~~~v~~~~~~~~~~  289 (298)
                      +.+--|..+++.+++++   |+++++++++||+.||++|.+.+| ...++-+.....++
T Consensus       171 p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~  229 (413)
T PLN02382        171 PQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQ  229 (413)
T ss_pred             eCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHH
Confidence            34445678999999999   999999999999999999999999 67667665544444

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.75  E-value=3.5e-07  Score=76.62  Aligned_cols=48  Identities=10%  Similarity=-0.094  Sum_probs=36.5

Q ss_pred             CCCHHHHHHHHHHhCCC--CCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          238 KPDPSIYVTAAKRLGIS--EKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi~--~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      -++....+.+.+.+.-.  +-.++.+||++||+.|.+.+.+..| +.++..
T Consensus       207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vv-i~~~~~  256 (302)
T PRK12702        207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVV-LPSPIA  256 (302)
T ss_pred             CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEE-ecCCCC
Confidence            35577788777776543  4478999999999999999999965 455444

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.75  E-value=4.2e-08  Score=91.52  Aligned_cols=89  Identities=15%  Similarity=0.190  Sum_probs=70.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .++||+.+++++|+++|++++++|+.....++..++++ |++ +  |.     +.  .++++++    +++++...+++|
T Consensus       405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l-gi~-~--~~-----~~--~p~~K~~----~v~~l~~~~~~v  469 (562)
T TIGR01511       405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL-GIN-V--RA-----EV--LPDDKAA----LIKELQEKGRVV  469 (562)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc-CCc-E--Ec-----cC--ChHHHHH----HHHHHHHcCCEE
Confidence            58999999999999999999999999999999999998 885 2  22     11  1233334    444444467899


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEc
Q 022348          259 LVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      +||||+.||+.+++++|+...+.+
T Consensus       470 ~~VGDg~nD~~al~~A~vgia~g~  493 (562)
T TIGR01511       470 AMVGDGINDAPALAQADVGIAIGA  493 (562)
T ss_pred             EEEeCCCccHHHHhhCCEEEEeCC
Confidence            999999999999999998754543

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=98.72  E-value=6.2e-08  Score=78.70  Aligned_cols=46  Identities=20%  Similarity=0.096  Sum_probs=42.3

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEE
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                      .+.+.+++.+++.+++++|++++++++|||+.||+.+++.+|+..+
T Consensus       158 ~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       158 LPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             ecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence            4567888999999999999999999999999999999999999865

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.71  E-value=7.2e-08  Score=94.23  Aligned_cols=92  Identities=15%  Similarity=0.197  Sum_probs=75.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .++||+.+.+++|++.|++++++|+......+.+++++ |+..+  |..+         .  |+....++++++..++++
T Consensus       650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l-gi~~~--~~~~---------~--p~~K~~~i~~l~~~~~~v  715 (834)
T PRK10671        650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA-GIDEV--IAGV---------L--PDGKAEAIKRLQSQGRQV  715 (834)
T ss_pred             cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCCEE--EeCC---------C--HHHHHHHHHHHhhcCCEE
Confidence            57899999999999999999999999999899999988 88754  3321         1  334456777888888899


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +||||+.||+.+++.+|+...+.++.
T Consensus       716 ~~vGDg~nD~~al~~Agvgia~g~g~  741 (834)
T PRK10671        716 AMVGDGINDAPALAQADVGIAMGGGS  741 (834)
T ss_pred             EEEeCCHHHHHHHHhCCeeEEecCCC
Confidence            99999999999999999976565443

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=98.69  E-value=1.5e-07  Score=75.66  Aligned_cols=92  Identities=17%  Similarity=0.350  Sum_probs=57.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChh-------hHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHH
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKS-------SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAK  249 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~-------~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~  249 (298)
                      .+++.||+.+.|++|.+.|..+.++|.....       .....++++++...+  -+.+++++     |.          
T Consensus        71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~--~~~~~~~~-----K~----------  133 (191)
T PF06941_consen   71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPY--DNLIFTGD-----KT----------  133 (191)
T ss_dssp             T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHH--CCEEEESS-----GG----------
T ss_pred             CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCch--heEEEecC-----CC----------
Confidence            4579999999999999999778777776543       233455555343332  23444322     21          


Q ss_pred             HhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          250 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       250 ~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      .++.   + ++|+|++.++..+...|+++++...+.+...
T Consensus       134 ~v~~---D-vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~  169 (191)
T PF06941_consen  134 LVGG---D-VLIDDRPHNLEQFANAGIPVILFDQPYNRDE  169 (191)
T ss_dssp             GC-----S-EEEESSSHHHSS-SSESSEEEEE--GGGTT-
T ss_pred             eEec---c-EEecCChHHHHhccCCCceEEEEcCCCCCCC
Confidence            1222   2 8999999999999999999998888777654

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01675 plant-AP plant acid phosphatase

Probab=98.68  E-value=7.5e-07  Score=72.56  Aligned_cols=102  Identities=15%  Similarity=0.079  Sum_probs=65.0

Q ss_pred             cCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhh---HHHHHHHHhCCccccCcceEEeCCCCCCCCCCH----HHHHHH
Q 022348          175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLAGDDVKQKKPDP----SIYVTA  247 (298)
Q Consensus       175 ~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~---~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~----~~~~~~  247 (298)
                      ....+..|++.++++.|+++|++++++|+.....   ....|... |...   ++.++-.......|+..    +....+
T Consensus       116 ~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~-G~~~---~~~LiLR~~~d~~~~~~~yKs~~R~~l  191 (229)
T TIGR01675       116 KGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINA-GFTG---WKHLILRGLEDSNKTVVTYKSEVRKSL  191 (229)
T ss_pred             cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHc-CCCC---cCeeeecCCCCCCchHhHHHHHHHHHH
Confidence            3456899999999999999999999999998765   34445554 5543   35444432112233221    222222


Q ss_pred             HHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       248 ~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      . +-|..  =+..|||..+|+.+ ..+|.++..++++
T Consensus       192 ~-~~GYr--Iv~~iGDq~sDl~G-~~~~~RtFKLPNP  224 (229)
T TIGR01675       192 M-EEGYR--IWGNIGDQWSDLLG-SPPGRRTFKLPNP  224 (229)
T ss_pred             H-hCCce--EEEEECCChHHhcC-CCccCceeeCCCC
Confidence            2 22332  26889999999966 4577777766654

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.66  E-value=3e-07  Score=65.64  Aligned_cols=84  Identities=21%  Similarity=0.232  Sum_probs=53.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhh---HHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~---~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      .++||+.++++.|+++|.+++++||+....   ....|+.+ |+.--  .+.++++.         ......+++. ...
T Consensus        14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~-Gi~~~--~~~i~ts~---------~~~~~~l~~~-~~~   80 (101)
T PF13344_consen   14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKL-GIPVD--EDEIITSG---------MAAAEYLKEH-KGG   80 (101)
T ss_dssp             EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHT-TTT----GGGEEEHH---------HHHHHHHHHH-TTS
T ss_pred             CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhc-CcCCC--cCEEEChH---------HHHHHHHHhc-CCC
Confidence            488999999999999999999999997544   33445555 66532  46666542         3444444442 234


Q ss_pred             CcEEEEecChhhHHHHHHcCC
Q 022348          256 KDCLVVEDSVIGLQAATRAGM  276 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~  276 (298)
                      ..++++|-. ...+.++.+|+
T Consensus        81 ~~v~vlG~~-~l~~~l~~~G~  100 (101)
T PF13344_consen   81 KKVYVLGSD-GLREELREAGF  100 (101)
T ss_dssp             SEEEEES-H-HHHHHHHHTTE
T ss_pred             CEEEEEcCH-HHHHHHHHcCC
Confidence            678888855 55666666664

...

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=98.61  E-value=1e-06  Score=73.04  Aligned_cols=107  Identities=16%  Similarity=0.171  Sum_probs=63.4

Q ss_pred             cCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHH----HHH
Q 022348          175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA----AKR  250 (298)
Q Consensus       175 ~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~----~~~  250 (298)
                      ....+..|++.++.+.++++|++|+++||.....-....+.| .-..|.+.+.++-.......+.+.--|+..    +.+
T Consensus       141 ~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~  219 (275)
T TIGR01680       141 KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQ  219 (275)
T ss_pred             cccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHH
Confidence            345679999999999999999999999999865444444444 222222234444332211111111122211    122


Q ss_pred             hCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          251 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       251 lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      -|...  +..|||..+|+.+....+.++..++++
T Consensus       220 eGYrI--v~~iGDq~sDl~G~~~g~~RtFKLPNP  251 (275)
T TIGR01680       220 EGYNI--VGIIGDQWNDLKGEHRGAIRSFKLPNP  251 (275)
T ss_pred             cCceE--EEEECCCHHhccCCCccCcceecCCCc
Confidence            34332  688999999997665333577777766

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.59  E-value=1.9e-07  Score=91.75  Aligned_cols=99  Identities=17%  Similarity=0.265  Sum_probs=82.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC----------------CCCCCHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK----------------QKKPDPS  242 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~----------------~~KP~~~  242 (298)
                      +++||+.+.++.|++.|+++.++|+.....+..+.+++ |+...  ++.++++++..                .+.+.|+
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~-Gi~~~--~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~  604 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL-GMPSK--TSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE  604 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCC--CCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence            57999999999999999999999999999999999998 98765  55566654432                2346677


Q ss_pred             HHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       243 ~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      -...+.+.+.-..+.+.|+||+.||+.+++.|+++..+
T Consensus       605 ~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~  642 (884)
T TIGR01522       605 HKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM  642 (884)
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec
Confidence            77777777766678899999999999999999988655

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=98.59  E-value=7.8e-08  Score=80.34  Aligned_cols=49  Identities=20%  Similarity=0.194  Sum_probs=37.1

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +..--|....+.+++++++++++++++||+.||+.|. ..+...|++.+.
T Consensus       161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na  209 (247)
T PF05116_consen  161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNA  209 (247)
T ss_dssp             ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred             cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence            3444567899999999999999999999999999999 666666655554

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.58  E-value=3.5e-07  Score=66.02  Aligned_cols=84  Identities=17%  Similarity=0.288  Sum_probs=67.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCH---HHHHHHHHHh--
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP---SIYVTAAKRL--  251 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~---~~~~~~~~~l--  251 (298)
                      .+.++|.+.+++.++|..|+-+..+|=++...+.+.|+.+ ++.++  |+-++.       +|.|   .++.++++++  
T Consensus        39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral-~~~~y--Fhy~Vi-------ePhP~K~~ML~~llr~i~~  108 (164)
T COG4996          39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL-DLLQY--FHYIVI-------EPHPYKFLMLSQLLREINT  108 (164)
T ss_pred             EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh-chhhh--EEEEEe-------cCCChhHHHHHHHHHHHHH
Confidence            3579999999999999999999999999988899999998 99999  887664       3444   3555555553  


Q ss_pred             ----CCCCCcEEEEecChhhHHH
Q 022348          252 ----GISEKDCLVVEDSVIGLQA  270 (298)
Q Consensus       252 ----gi~~~~~~~vgD~~~Di~~  270 (298)
                          .+.|.++++++|..--+.-
T Consensus       109 er~~~ikP~~Ivy~DDR~iH~~~  131 (164)
T COG4996         109 ERNQKIKPSEIVYLDDRRIHFGN  131 (164)
T ss_pred             hhccccCcceEEEEecccccHHH
Confidence                5679999999999854433

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=98.57  E-value=7.1e-08  Score=79.41  Aligned_cols=103  Identities=20%  Similarity=0.205  Sum_probs=62.7

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHH---HHHHHhCCccccCcceEEeCCCCCCCC---C-CHHHHHHHH
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLIGMERFEGLDCFLAGDDVKQKK---P-DPSIYVTAA  248 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~---~l~~~~~l~~~~~fd~v~~~~~~~~~K---P-~~~~~~~~~  248 (298)
                      ......||+.+|+..++++|++|+++||........   -|... |...+  -..++.++.....+   . +..-...+.
T Consensus       112 ~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~-G~~~~--~~l~lr~~~~~~~~~~~~yK~~~r~~i~  188 (229)
T PF03767_consen  112 GKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKA-GFPGW--DHLILRPDKDPSKKSAVEYKSERRKEIE  188 (229)
T ss_dssp             TGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHH-TTSTB--SCGEEEEESSTSS------SHHHHHHHH
T ss_pred             ccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHc-CCCcc--chhccccccccccccccccchHHHHHHH
Confidence            334799999999999999999999999987664443   45555 65443  22333333221111   1 223333333


Q ss_pred             HHhCCCCCcEEEEecChhhHHHHHHc---CCeEEEEcCC
Q 022348          249 KRLGISEKDCLVVEDSVIGLQAATRA---GMACVITYTS  284 (298)
Q Consensus       249 ~~lgi~~~~~~~vgD~~~Di~~a~~a---G~~~v~~~~~  284 (298)
                      ++ |...  +++|||..+|+..++..   |-..+.++++
T Consensus       189 ~~-Gy~I--i~~iGD~~~D~~~~~~~~~~~~r~f~lPNp  224 (229)
T PF03767_consen  189 KK-GYRI--IANIGDQLSDFSGAKTAGARAERWFKLPNP  224 (229)
T ss_dssp             HT-TEEE--EEEEESSGGGCHCTHHHHHHHTTEEE-TTS
T ss_pred             Hc-CCcE--EEEeCCCHHHhhcccccccccceEEEcCCC
Confidence            33 4433  89999999999994433   4555666554

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=98.49  E-value=2.2e-06  Score=62.08  Aligned_cols=92  Identities=16%  Similarity=0.215  Sum_probs=76.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      -.+|+.+.+.+++|++. ++++|.|+.....+...++.. |+.    .+.++.+       -+++....++++|+-+-+.
T Consensus        29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~-gi~----~~rv~a~-------a~~e~K~~ii~eLkk~~~k   95 (152)
T COG4087          29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFV-GIP----VERVFAG-------ADPEMKAKIIRELKKRYEK   95 (152)
T ss_pred             cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHc-CCc----eeeeecc-------cCHHHHHHHHHHhcCCCcE
Confidence            36999999999999999 999999999888888777776 765    3455543       3466778899999876699


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEc
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      |+||||+.||+.+.+++....+.+.
T Consensus        96 ~vmVGnGaND~laLr~ADlGI~tiq  120 (152)
T COG4087          96 VVMVGNGANDILALREADLGICTIQ  120 (152)
T ss_pred             EEEecCCcchHHHhhhcccceEEec
Confidence            9999999999999999988855444

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=98.44  E-value=1.7e-06  Score=83.38  Aligned_cols=90  Identities=18%  Similarity=0.174  Sum_probs=70.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .++||+.+.+++|++.|++++++|+.....+..+.+++ |+..+  ++      ..+..|      ..++++++ ....+
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l-gi~~~--~~------~~p~~K------~~~v~~l~-~~~~v  631 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL-GIDFR--AG------LLPEDK------VKAVTELN-QHAPL  631 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCee--cC------CCHHHH------HHHHHHHh-cCCCE
Confidence            68999999999999999999999999999999999998 88633  21      112222      22455554 34689


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +||||+.||..+++.+++...+.++.
T Consensus       632 ~mvGDgiNDapAl~~A~vgia~g~~~  657 (741)
T PRK11033        632 AMVGDGINDAPAMKAASIGIAMGSGT  657 (741)
T ss_pred             EEEECCHHhHHHHHhCCeeEEecCCC
Confidence            99999999999999999887665443

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=98.41  E-value=3e-06  Score=64.68  Aligned_cols=95  Identities=20%  Similarity=0.216  Sum_probs=65.1

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHH---HHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~---~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      +-.-+.+|+.-.+++|-.++.+|+.....++   ..|...+.+..+  .-.++.++   ++||...-....++.-++   
T Consensus       115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m--~pv~f~Gd---k~k~~qy~Kt~~i~~~~~---  186 (237)
T COG3700         115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM--NPVIFAGD---KPKPGQYTKTQWIQDKNI---  186 (237)
T ss_pred             hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC--cceeeccC---CCCcccccccHHHHhcCc---
Confidence            3345677888899999999999998755444   344444466554  34555554   234443344455666666   


Q ss_pred             cEEEEecChhhHHHHHHcCCeEE-EEcC
Q 022348          257 DCLVVEDSVIGLQAATRAGMACV-ITYT  283 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v-~~~~  283 (298)
                       -+|.||+-+|+-+|+.+|.+.| ++..
T Consensus       187 -~IhYGDSD~Di~AAkeaG~RgIRilRA  213 (237)
T COG3700         187 -RIHYGDSDNDITAAKEAGARGIRILRA  213 (237)
T ss_pred             -eEEecCCchhhhHHHhcCccceeEEec
Confidence             4899999999999999999988 4443

>PLN02423 phosphomannomutase

Probab=98.40  E-value=1.9e-07  Score=78.03  Aligned_cols=48  Identities=4%  Similarity=-0.172  Sum_probs=37.6

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEec----ChhhHHHHHHcCCeEEEEcCCCc
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD----~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      ...+--+..+++.++     +++++++|||    +.||++|.+.-|..++-|.++..
T Consensus       184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~  235 (245)
T PLN02423        184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD  235 (245)
T ss_pred             eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence            334444556666665     8999999999    69999999999999997777644

>PTZ00174 phosphomannomutase; Provisional

Probab=98.38  E-value=7.8e-07  Score=74.49  Aligned_cols=45  Identities=4%  Similarity=-0.169  Sum_probs=36.3

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEec----ChhhHHHHHHcCCeEEEEc
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITY  282 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD----~~~Di~~a~~aG~~~v~~~  282 (298)
                      ...+-.+..+.+.+++.    ++++++|||    +.||++|.+.+|..++.+.
T Consensus       183 ~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~  231 (247)
T PTZ00174        183 FPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK  231 (247)
T ss_pred             eeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence            34455567888888888    599999999    8999999998887766555

>smart00775 LNS2 LNS2 domain

Probab=98.38  E-value=7.1e-06  Score=63.51  Aligned_cols=97  Identities=16%  Similarity=0.188  Sum_probs=59.0

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHH---HHHHHHh--CCccccCcceEEeCCC---------CCCCCC---CHH
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLI--GMERFEGLDCFLAGDD---------VKQKKP---DPS  242 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~---~~l~~~~--~l~~~~~fd~v~~~~~---------~~~~KP---~~~  242 (298)
                      ..|++.+++++++++|+++.++|+.......   ..++.+.  +. .+. ...++.+..         +...+|   +.+
T Consensus        28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~-~lp-~g~li~~~g~~~~~~~~e~i~~~~~~~K~~  105 (157)
T smart00775       28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGH-NLP-HGPVLLSPDRLFAALHREVISKKPEVFKIA  105 (157)
T ss_pred             CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccc-cCC-CceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence            5689999999999999999999999877654   4554420  11 110 123333322         112333   333


Q ss_pred             HHHHHHHHhCCCCCc-EEEEecChhhHHHHHHcCCeE
Q 022348          243 IYVTAAKRLGISEKD-CLVVEDSVIGLQAATRAGMAC  278 (298)
Q Consensus       243 ~~~~~~~~lgi~~~~-~~~vgD~~~Di~~a~~aG~~~  278 (298)
                      ..+.+.+.+.-.--. +..+||+.+|+++=+++|+..
T Consensus       106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~  142 (157)
T smart00775      106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP  142 (157)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence            444444433211112 334788899999999999985

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=98.36  E-value=4.5e-06  Score=70.56  Aligned_cols=48  Identities=6%  Similarity=0.053  Sum_probs=39.9

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHc----CCeEEEEcC
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA----GMACVITYT  283 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~a----G~~~v~~~~  283 (298)
                      .+.-+....+.+++.+|+..+++++|||+.||..|.+.+    |+.+.+-++
T Consensus       171 ~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a  222 (266)
T PRK10187        171 RGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG  222 (266)
T ss_pred             CCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence            344567899999999999999999999999999999998    766545443

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=98.33  E-value=2e-05  Score=62.93  Aligned_cols=102  Identities=18%  Similarity=0.231  Sum_probs=80.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhC--C----ccccCcceEEeCCCCCCCCCCHHHHHHHHHHhC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG--M----ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG  252 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~--l----~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lg  252 (298)
                      ..++++...++.-+..|++++|.|.+.......++..-..  +    ..|  ||.-+      -.|-....|..+.+.+|
T Consensus       123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gy--fDt~i------G~K~e~~sy~~I~~~Ig  194 (254)
T KOG2630|consen  123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGY--FDTTI------GLKVESQSYKKIGHLIG  194 (254)
T ss_pred             cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhh--hhccc------cceehhHHHHHHHHHhC
Confidence            6899999999999999999999999988766555543201  1    112  33322      24667789999999999


Q ss_pred             CCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          253 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       253 i~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      .++.+++|+-|......+|+.+|..+.++..|.+..
T Consensus       195 ~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~  230 (254)
T KOG2630|consen  195 KSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAP  230 (254)
T ss_pred             CChhheEEeccChHHHHHHHhcccceeeeecCCCCC
Confidence            999999999999999999999999988766665544

>TIGR00685 T6PP trehalose-phosphatase

Probab=98.32  E-value=9.7e-07  Score=73.76  Aligned_cols=41  Identities=15%  Similarity=-0.062  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHc-------CCeEEEE
Q 022348          241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA-------GMACVIT  281 (298)
Q Consensus       241 ~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~a-------G~~~v~~  281 (298)
                      ...++.+++++++.+.++++|||+.+|+.|++.+       |..++.+
T Consensus       169 g~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v  216 (244)
T TIGR00685       169 GEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPI  216 (244)
T ss_pred             HHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEE
Confidence            5899999999999999999999999999999998       5556644

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=98.29  E-value=3.6e-06  Score=79.33  Aligned_cols=93  Identities=12%  Similarity=0.179  Sum_probs=72.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .+.||+.+.+++|++.|+++.++|+.+...+..+.+++ |++.+      +.     ...  |+-...+.+++.-....+
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l-GI~~v------~a-----~~~--PedK~~~v~~lq~~g~~V  511 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA-GVDDF------IA-----EAT--PEDKIALIRQEQAEGKLV  511 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCEE------Ec-----CCC--HHHHHHHHHHHHHcCCeE
Confidence            58899999999999999999999999999999999998 88654      21     122  333344444443334579


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      .|+||+.||..+.+.+++...+..+..
T Consensus       512 amvGDG~NDapAL~~AdvGiAm~~gt~  538 (675)
T TIGR01497       512 AMTGDGTNDAPALAQADVGVAMNSGTQ  538 (675)
T ss_pred             EEECCCcchHHHHHhCCEeEEeCCCCH
Confidence            999999999999999999977765433

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=98.27  E-value=5.1e-05  Score=63.42  Aligned_cols=102  Identities=14%  Similarity=0.212  Sum_probs=73.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHh--CCccccCcceEE-------------eCCC----------
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI--GMERFEGLDCFL-------------AGDD----------  233 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~--~l~~~~~fd~v~-------------~~~~----------  233 (298)
                      ..-+.+.+++..|+++|+++..+|..........++.|-  |++    |+...             ....          
T Consensus        81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~----fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIl  156 (252)
T PF11019_consen   81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID----FSSSSFPEDGIISFPVFDSALSRAPSFYDGIL  156 (252)
T ss_pred             EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC----ccccccccCcceecccccCCCCCCceeecCeE
Confidence            466899999999999999999999998776665555552  443    22110             0000          


Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHH----cCCeEE-EEcCC
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATR----AGMACV-ITYTS  284 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~----aG~~~v-~~~~~  284 (298)
                      +..+-++..++..++.+.|..|+.++||+|+..+++....    .|+..+ +.+++
T Consensus       157 ft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~  212 (252)
T PF11019_consen  157 FTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTG  212 (252)
T ss_pred             EeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence            1133456789999999999999999999999988876554    588876 44443

The function is not known.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=98.21  E-value=8.7e-06  Score=76.85  Aligned_cols=97  Identities=12%  Similarity=0.226  Sum_probs=76.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .+.||+.+.+++||+.|+++.++|+.+...+..+.+++ |++++  |.           .-.|+-...+.+++.-.-+-+
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el-GI~~v--~A-----------~~~PedK~~iV~~lQ~~G~~V  506 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA-GVDRF--VA-----------ECKPEDKINVIREEQAKGHIV  506 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCceE--Ec-----------CCCHHHHHHHHHHHHhCCCEE
Confidence            58899999999999999999999999999999999998 88754  21           123455555666665445679


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      .|+||+.||..+.++|.++..+..|..-+++
T Consensus       507 aMtGDGvNDAPALa~ADVGIAMgsGTdvAke  537 (673)
T PRK14010        507 AMTGDGTNDAPALAEANVGLAMNSGTMSAKE  537 (673)
T ss_pred             EEECCChhhHHHHHhCCEEEEeCCCCHHHHH
Confidence            9999999999999999999777655443433

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=98.20  E-value=5.5e-06  Score=81.78  Aligned_cols=104  Identities=17%  Similarity=0.202  Sum_probs=77.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC--cceEEeCCC----------------CCCCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG--LDCFLAGDD----------------VKQKKPD  240 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~--fd~v~~~~~----------------~~~~KP~  240 (298)
                      +++|++.+.++.|++.|++++++|+.....+..+.+++ |+..-..  .+..+.+.+                .-.++-.
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~-gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~  615 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI-GIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE  615 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHc-CCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence            47999999999999999999999999988899999998 7753110  112233211                1123344


Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       241 ~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      |+-...+++.++-..+.+.|+||+.||+.|.+.|+++..+..+
T Consensus       616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g  658 (917)
T TIGR01116       616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSG  658 (917)
T ss_pred             HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCC
Confidence            5556777777776677899999999999999999998665433

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=98.19  E-value=8.7e-06  Score=76.94  Aligned_cols=97  Identities=14%  Similarity=0.220  Sum_probs=75.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .+.||+.+.+++||+.|+++.++|+.+...+..+.+++ |++.+      +.       .-.|+-...+.+++.-..+-+
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el-GId~v------~A-------~~~PedK~~iV~~lQ~~G~~V  510 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA-GVDDF------LA-------EATPEDKLALIRQEQAEGRLV  510 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCcEE------Ec-------cCCHHHHHHHHHHHHHcCCeE
Confidence            36899999999999999999999999999999999998 88653      21       123445555555554444669


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      .|+||+.||..+.++|.++..+..|..-.++
T Consensus       511 aMtGDGvNDAPALa~ADVGIAMgsGTdvAke  541 (679)
T PRK01122        511 AMTGDGTNDAPALAQADVGVAMNSGTQAAKE  541 (679)
T ss_pred             EEECCCcchHHHHHhCCEeEEeCCCCHHHHH
Confidence            9999999999999999999777755444443

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=98.16  E-value=0.00023  Score=65.12  Aligned_cols=97  Identities=15%  Similarity=0.115  Sum_probs=59.4

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc------ceEEeCCCCCCCCC-C-HHHHHHHHHHh
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL------DCFLAGDDVKQKKP-D-PSIYVTAAKRL  251 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f------d~v~~~~~~~~~KP-~-~~~~~~~~~~l  251 (298)
                      +.|++.+   .++++|.. +|+|......++..++.++|++..-+-      +..+++.-.+. .+ . .+-...+.+.+
T Consensus       111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~-~~c~Ge~Kv~rl~~~~  185 (497)
T PLN02177        111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKP-GVLVGDHKRDAVLKEF  185 (497)
T ss_pred             cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCC-CCCccHHHHHHHHHHh
Confidence            6666555   44567754 999999999999888764376643111      22233321111 01 0 11122233556


Q ss_pred             CCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          252 GISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       252 gi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      |.+... +++||+.+|..+...++-..++..
T Consensus       186 g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~  215 (497)
T PLN02177        186 GDALPD-LGLGDRETDHDFMSICKEGYMVPR  215 (497)
T ss_pred             CCCCce-EEEECCccHHHHHHhCCccEEeCC
Confidence            755444 999999999999999998876544

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.15  E-value=1.1e-05  Score=76.37  Aligned_cols=96  Identities=18%  Similarity=0.221  Sum_probs=74.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .+.|+..+.+++||+.|+++.++|+.+...++.+.+++ |++.+  +-     +    -+  |+-.....+++.-.-..+
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l-GId~v--~A-----e----ll--PedK~~~V~~l~~~g~~V  602 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL-GIDEV--RA-----E----LL--PEDKAEIVRELQAEGRKV  602 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-ChHhh--ec-----c----CC--cHHHHHHHHHHHhcCCEE
Confidence            58899999999999999999999999999999999998 88765  21     1    22  223344555554344679


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      .||||+.||..+...|.+...+..|..-..
T Consensus       603 amVGDGINDAPALA~AdVGiAmG~GtDvA~  632 (713)
T COG2217         603 AMVGDGINDAPALAAADVGIAMGSGTDVAI  632 (713)
T ss_pred             EEEeCCchhHHHHhhcCeeEeecCCcHHHH
Confidence            999999999999999999876666544333

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=98.08  E-value=2.4e-05  Score=70.38  Aligned_cols=105  Identities=15%  Similarity=0.196  Sum_probs=72.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCC------ccccCcceEEeCCC-----------------C
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM------ERFEGLDCFLAGDD-----------------V  234 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l------~~~~~fd~v~~~~~-----------------~  234 (298)
                      +...|.+..+|+.||++|.++.++||+.-..+...++.+.|-      +...-||.|+....                 .
T Consensus       182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~  261 (448)
T PF05761_consen  182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET  261 (448)
T ss_dssp             EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred             ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence            456789999999999999999999999999999999998766      43334999887532                 0


Q ss_pred             CCCCCC-------------HHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHc-CCeEEEEc
Q 022348          235 KQKKPD-------------PSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRA-GMACVITY  282 (298)
Q Consensus       235 ~~~KP~-------------~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~a-G~~~v~~~  282 (298)
                      +..+..             .--...+.+.+|...+++++|||+. .|+..++.. ||.|+.+-
T Consensus       262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii  324 (448)
T PF05761_consen  262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII  324 (448)
T ss_dssp             SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred             CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence            100000             0136777788899999999999999 599988887 99998653

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PLN02645 phosphoglycolate phosphatase

Probab=98.07  E-value=3.4e-05  Score=66.85  Aligned_cols=90  Identities=17%  Similarity=0.135  Sum_probs=68.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHH---HHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL---ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l---~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      .++||+.++|++|+++|++++++||+........+   +.+ |+...  ++.|+++.         ......+++.+...
T Consensus        44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l-Gi~~~--~~~I~ts~---------~~~~~~l~~~~~~~  111 (311)
T PLN02645         44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL-GLNVT--EEEIFSSS---------FAAAAYLKSINFPK  111 (311)
T ss_pred             ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC-CCCCC--hhhEeehH---------HHHHHHHHhhccCC
Confidence            47899999999999999999999999855444444   555 66543  67776653         24555666666655


Q ss_pred             CcEEEEecChhhHHHHHHcCCeEEE
Q 022348          256 KDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ...++|+++..+.+.++.+|+.++.
T Consensus       112 ~~~V~viG~~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645        112 DKKVYVIGEEGILEELELAGFQYLG  136 (311)
T ss_pred             CCEEEEEcCHHHHHHHHHCCCEEec
Confidence            5568888889999999999998754

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=98.03  E-value=1.7e-05  Score=78.06  Aligned_cols=100  Identities=14%  Similarity=0.160  Sum_probs=76.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC----------------CCCCCHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK----------------QKKPDPS  242 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~----------------~~KP~~~  242 (298)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+++ |+..    +.++++.+..                ..+-.|+
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~----~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe  624 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEV-GLDA----GEVLIGSDIETLSDDELANLAERTTLFARLTPM  624 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCc----cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHH
Confidence            47899999999999999999999999999999999998 8852    3344443321                1234455


Q ss_pred             HHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       243 ~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      -...+.+.+.-...-+.|+||+.||..+.+.|.++..+..+
T Consensus       625 ~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~g  665 (902)
T PRK10517        625 HKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGA  665 (902)
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCc
Confidence            55556665544456799999999999999999999776544

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=98.01  E-value=1.5e-05  Score=77.11  Aligned_cols=103  Identities=17%  Similarity=0.138  Sum_probs=74.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccc-cCcceEEeCCCC----------------CCCCCCH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF-EGLDCFLAGDDV----------------KQKKPDP  241 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~-~~fd~v~~~~~~----------------~~~KP~~  241 (298)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+++ |+..- ..-+.+..+++.                ...+-.|
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P  520 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL-GLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP  520 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence            58899999999999999999999999999999999998 88531 000111111110                1223345


Q ss_pred             HHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       242 ~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      +-...+.+.+.-..+.+.|+||+.||..+.+.|.++..+..
T Consensus       521 e~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~  561 (755)
T TIGR01647       521 EHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAG  561 (755)
T ss_pred             HHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecC
Confidence            55555566565455679999999999999999999976653

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=98.00  E-value=2.6e-05  Score=76.56  Aligned_cols=101  Identities=14%  Similarity=0.180  Sum_probs=75.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC----------------CCCCCHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK----------------QKKPDPS  242 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~----------------~~KP~~~  242 (298)
                      ++.|++.+.+++|++.|+++.++|+.....+..+.+++ |+..    +.++.+.+..                ...-.|+
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l-GI~~----~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe  589 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV-GIDA----NDFLLGADIEELSDEELARELRKYHIFARLTPM  589 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCC----CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHH
Confidence            47899999999999999999999999999999999998 8852    2233333211                1223444


Q ss_pred             HHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       243 ~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      -...+.+.+.-.-+.+.|+||+.||..+.+.|.++..+..+.
T Consensus       590 ~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gt  631 (867)
T TIGR01524       590 QKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAA  631 (867)
T ss_pred             HHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCcc
Confidence            444555555434467999999999999999999997766443

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.96  E-value=2.7e-05  Score=60.14  Aligned_cols=84  Identities=13%  Similarity=0.198  Sum_probs=64.2

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc-cccCc-ceEEeCCCCCCCCCCHHHHHHHH-HHhCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGL-DCFLAGDDVKQKKPDPSIYVTAA-KRLGI  253 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~-~~~~f-d~v~~~~~~~~~KP~~~~~~~~~-~~lgi  253 (298)
                      .+.++||+.++|++|++. ++++|+|++....+..+++.+ +.. .+  | +.+++.++...  +    +.+-+ ..+|.
T Consensus        56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~l-dp~~~~--F~~ri~~rd~~~~--~----~~KdL~~i~~~  125 (156)
T TIGR02250        56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLI-DPDGKY--FGDRIISRDESGS--P----HTKSLLRLFPA  125 (156)
T ss_pred             EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHh-CcCCCe--eccEEEEeccCCC--C----ccccHHHHcCC
Confidence            357999999999999966 999999999999999999998 766 46  7 67777765431  1    11123 34577


Q ss_pred             CCCcEEEEecChhhHHH
Q 022348          254 SEKDCLVVEDSVIGLQA  270 (298)
Q Consensus       254 ~~~~~~~vgD~~~Di~~  270 (298)
                      +.+.+++|+|++.-...
T Consensus       126 d~~~vvivDd~~~~~~~  142 (156)
T TIGR02250       126 DESMVVIIDDREDVWPW  142 (156)
T ss_pred             CcccEEEEeCCHHHhhc
Confidence            88999999999954433

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=97.96  E-value=0.00077  Score=54.65  Aligned_cols=88  Identities=9%  Similarity=0.015  Sum_probs=64.8

Q ss_pred             EEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCe
Q 022348          198 VAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA  277 (298)
Q Consensus       198 i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~  277 (298)
                      -++||++.-.......=. .+++.++..+.|+++-.+  +|  .++|+.+.+++|-+.-.-++|||+...-.+|+..+|+
T Consensus       178 NvLVTs~qLVPaLaKcLL-y~L~~~f~ieNIYSa~kv--GK--~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wP  252 (274)
T TIGR01658       178 NVLVTSGQLIPSLAKCLL-FRLDTIFRIENVYSSIKV--GK--LQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWP  252 (274)
T ss_pred             EEEEEcCccHHHHHHHHH-hccCCccccccccchhhc--ch--HHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCC
Confidence            355665553323322323 488888777888877654  35  6799999999998778899999999999999999999


Q ss_pred             EEEEcCCCchhHh
Q 022348          278 CVITYTSSTAEQV  290 (298)
Q Consensus       278 ~v~~~~~~~~~~~  290 (298)
                      ++-+........+
T Consensus       253 Fw~I~~h~Dl~~l  265 (274)
T TIGR01658       253 FVKIDLHPDSSHR  265 (274)
T ss_pred             eEEeecCCCHHHh
Confidence            9877665555443

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=97.96  E-value=2.8e-05  Score=76.55  Aligned_cols=101  Identities=15%  Similarity=0.152  Sum_probs=77.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC----------------CCCCCHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK----------------QKKPDPS  242 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~----------------~~KP~~~  242 (298)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+++ |+..    +.++++.+..                ...-.|+
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l-GI~~----~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe  624 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV-GLEP----GEPLLGTEIEAMDDAALAREVEERTVFAKLTPL  624 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCC----CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHH
Confidence            57899999999999999999999999999999999998 8852    2334443321                2233555


Q ss_pred             HHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       243 ~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      -...+.+.+.-.-+-+.|+||+.||..+.+.|.++..+..|.
T Consensus       625 ~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gt  666 (903)
T PRK15122        625 QKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGA  666 (903)
T ss_pred             HHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCccc
Confidence            556666666544567999999999999999999997665443

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=97.95  E-value=2.7e-05  Score=77.29  Aligned_cols=100  Identities=18%  Similarity=0.167  Sum_probs=75.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC----------------CCCCCHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK----------------QKKPDPS  242 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~----------------~~KP~~~  242 (298)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+++ |+..-  -..++++.+..                .+.-.|+
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~-GI~~~--~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe  655 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC-GILTF--GGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPL  655 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc-CCCCC--CceEeeHHHhhhCCHHHHHHHhccCeEEEECCHH
Confidence            57889999999999999999999999999999999998 88632  12344443311                1233455


Q ss_pred             HHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       243 ~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      -...+.+.+.-.-+.+.|+||+.||..+.++|.++..+.
T Consensus       656 ~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg  694 (941)
T TIGR01517       656 DKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMG  694 (941)
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecC
Confidence            555555555434457999999999999999999886654

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.95  E-value=0.00013  Score=60.56  Aligned_cols=82  Identities=22%  Similarity=0.352  Sum_probs=65.2

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC------------------------
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK------------------------  235 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~------------------------  235 (298)
                      ..|.+.+.|.+|++.|..+++=|-|+.+++.+.++.+ ++.++  ||.++++....                        
T Consensus       143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~-~L~~~--Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~Fyl  219 (297)
T PF05152_consen  143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL-KLEGY--FDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYL  219 (297)
T ss_pred             CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh-CCccc--cEEEEeCCccCCcCCccceeecccceEEeccceEE
Confidence            4467788899999999999999999999999999999 99998  99998864311                        


Q ss_pred             -------CCCCCHHHHHHHHHHhCCCC-CcEEEEecCh
Q 022348          236 -------QKKPDPSIYVTAAKRLGISE-KDCLVVEDSV  265 (298)
Q Consensus       236 -------~~KP~~~~~~~~~~~lgi~~-~~~~~vgD~~  265 (298)
                             .+| +|.+....+++.|+.- +.+--|+|-.
T Consensus       220 Dv~~~~~LPK-SPrVVL~yL~k~gvny~KtiTLVDDL~  256 (297)
T PF05152_consen  220 DVTNVNNLPK-SPRVVLWYLRKKGVNYFKTITLVDDLK  256 (297)
T ss_pred             eCCcCCCCCC-CCeehHHHHHHcCCceeeeEEEeccCc
Confidence                   122 4667778888888874 6666777766

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=97.93  E-value=0.00022  Score=54.12  Aligned_cols=96  Identities=18%  Similarity=0.126  Sum_probs=63.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .+..++...|..++++ .+++.+|.......+..-..+ -... .++|.+...+-  ..|      -.+.+.++++    
T Consensus        72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l-~~q~-ih~~~l~i~g~--h~K------V~~vrth~id----  136 (194)
T COG5663          72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWL-FIQN-IHYDHLEIVGL--HHK------VEAVRTHNID----  136 (194)
T ss_pred             HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHH-HHhc-cchhhhhhhcc--ccc------chhhHhhccC----
Confidence            3555778888888888 678888887766555443333 2222 12454432221  223      2367888886    


Q ss_pred             EEEecCh-hhHHHHHHcCCeEEEEcCCCchhH
Q 022348          259 LVVEDSV-IGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       259 ~~vgD~~-~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      +|+.|+. |-++.|+.+|++.+.++++.+.+-
T Consensus       137 lf~ed~~~na~~iAk~~~~~vilins~ynRkp  168 (194)
T COG5663         137 LFFEDSHDNAGQIAKNAGIPVILINSPYNRKP  168 (194)
T ss_pred             ccccccCchHHHHHHhcCCcEEEecCcccccc
Confidence            6999998 577778889999999999887654

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=97.86  E-value=6.3e-05  Score=75.13  Aligned_cols=102  Identities=14%  Similarity=0.153  Sum_probs=76.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC--------cceEEeCCCCC---------------
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG--------LDCFLAGDDVK---------------  235 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~--------fd~v~~~~~~~---------------  235 (298)
                      ++.|++.+.++.|++.|++++++|+.....+..+.+++ |+..-..        -+.++++.+..               
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~-Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~  724 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV-GIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL  724 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence            57899999999999999999999999999999999998 8853100        02355554322               


Q ss_pred             -CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          236 -QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       236 -~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                       .+.-.|+-...+.+.+.-..+.+.|+||+.||..+.+.|.++..+.
T Consensus       725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg  771 (1053)
T TIGR01523       725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMG  771 (1053)
T ss_pred             EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecC
Confidence             1334555555555555444567899999999999999999997654

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=97.83  E-value=0.0003  Score=56.80  Aligned_cols=86  Identities=17%  Similarity=0.207  Sum_probs=57.3

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhh-HH---HHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHh
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS-VI---LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL  251 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~-~~---~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l  251 (298)
                      ....+.||+.+++...-++|..|..+||.+... ..   .-|.+. |+..... +.++.-   ...|++..=++.+.+-+
T Consensus       119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~-g~~~~~~-~~~llk---k~~k~Ke~R~~~v~k~~  193 (274)
T COG2503         119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSE-GLPQVLE-SHLLLK---KDKKSKEVRRQAVEKDY  193 (274)
T ss_pred             cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHc-Ccccccc-cceEEe---eCCCcHHHHHHHHhhcc
Confidence            345799999999999999999999999998775 33   334444 6655422 222222   23455544455554433


Q ss_pred             CCCCCcEEEEecChhhHHH
Q 022348          252 GISEKDCLVVEDSVIGLQA  270 (298)
Q Consensus       252 gi~~~~~~~vgD~~~Di~~  270 (298)
                          +-++.|||+.+|.-.
T Consensus       194 ----~iVm~vGDNl~DF~d  208 (274)
T COG2503         194 ----KIVMLVGDNLDDFGD  208 (274)
T ss_pred             ----ceeeEecCchhhhcc
Confidence                448999999988654

>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]

Probab=97.79  E-value=0.001  Score=57.12  Aligned_cols=87  Identities=15%  Similarity=0.131  Sum_probs=61.7

Q ss_pred             EEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCe
Q 022348          198 VAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA  277 (298)
Q Consensus       198 i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~  277 (298)
                      -++||+..-......+-. .||..++..+.|+++-.+|  |  ..+|+.|.+++|- .-.-++|||+...-.+|++..|+
T Consensus       373 nVlvTttqLipalaKvLL-~gLg~~fpiENIYSa~kiG--K--escFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~P  446 (468)
T KOG3107|consen  373 NVLVTTTQLIPALAKVLL-YGLGSSFPIENIYSATKIG--K--ESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMP  446 (468)
T ss_pred             EEEEeccchhHHHHHHHH-HhcCCcccchhhhhhhhcc--H--HHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCc
Confidence            456666654333333333 4888776778888765544  4  5699999999997 34668899999999999999999


Q ss_pred             EEEEcCCCchhHh
Q 022348          278 CVITYTSSTAEQV  290 (298)
Q Consensus       278 ~v~~~~~~~~~~~  290 (298)
                      +.-+........+
T Consensus       447 fwrI~~h~Dl~~l  459 (468)
T KOG3107|consen  447 FWRISSHSDLDAL  459 (468)
T ss_pred             eEeeccCccHHHH
Confidence            8766655554444

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.76  E-value=9.4e-05  Score=73.02  Aligned_cols=102  Identities=19%  Similarity=0.201  Sum_probs=78.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc-ceEEeCCCCC----------------CCCCCH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLAGDDVK----------------QKKPDP  241 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f-d~v~~~~~~~----------------~~KP~~  241 (298)
                      ++.+++.+.++.|++.|+++..+|+.....+..+.+++ |+..- .. +.++.|.+..                .++-+|
T Consensus       547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~-Gi~~~-~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP  624 (917)
T COG0474         547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC-GIEAE-AESALVIDGAELDALSDEELAELVEELSVFARVSP  624 (917)
T ss_pred             CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc-CCCCC-CCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence            58899999999999999999999999999999999998 87653 11 3366665422                233455


Q ss_pred             HHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       242 ~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      +-...+.+.+.-.-.-+.|.||+.||+.|.+.|.++..+..
T Consensus       625 ~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~  665 (917)
T COG0474         625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG  665 (917)
T ss_pred             HHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc
Confidence            55555655555455679999999999999999999975554

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.67  E-value=0.0002  Score=68.02  Aligned_cols=97  Identities=20%  Similarity=0.228  Sum_probs=72.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .+.||+...+..||+.|++++.+|+.+...++...+++ |+      |.|++ +-.+..|  .+.++.+.+    ....+
T Consensus       723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V-Gi------~~V~a-ev~P~~K--~~~Ik~lq~----~~~~V  788 (951)
T KOG0207|consen  723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV-GI------DNVYA-EVLPEQK--AEKIKEIQK----NGGPV  788 (951)
T ss_pred             ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh-Cc------ceEEe-ccCchhh--HHHHHHHHh----cCCcE
Confidence            47899999999999999999999999999999999988 63      44442 2222222  334444433    33669


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      .||||+.||-.+...|.++..+..|...+.+
T Consensus       789 aMVGDGINDaPALA~AdVGIaig~gs~vAie  819 (951)
T KOG0207|consen  789 AMVGDGINDAPALAQADVGIAIGAGSDVAIE  819 (951)
T ss_pred             EEEeCCCCccHHHHhhccceeeccccHHHHh
Confidence            9999999999999999888766666444333

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.60  E-value=0.001  Score=49.22  Aligned_cols=30  Identities=20%  Similarity=0.301  Sum_probs=25.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhh
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS  208 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~  208 (298)
                      .+.+++.+.|+++++.|+.+.++|+.....
T Consensus        24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~   53 (126)
T TIGR01689        24 APILAVIEKLRHYKALGFEIVISSSRNMRT   53 (126)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence            366788899999999999999999987653

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.57  E-value=0.00044  Score=60.79  Aligned_cols=123  Identities=16%  Similarity=0.228  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHHh------cCCCCCChhHHHHHHHHHHCCCeEEEEeCCC--hhhHHHHHHHHhCCccccCcce
Q 022348          156 KLIDLIQDWKTERYQQIIK------SGTVEPRPGVLRLMDEAKAAGKKVAVCSAAT--KSSVILCLENLIGMERFEGLDC  227 (298)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~------~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~--~~~~~~~l~~~~~l~~~~~fd~  227 (298)
                      +.++.+.+.+...+.++..      ...+-+.....++.+++.++|.+|.++|.--  ...++..|... |-+-.  ---
T Consensus        70 eil~~~~q~~p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~-g~d~~--nip  146 (635)
T COG5610          70 EILNLLQQNFPLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSF-GPDFN--NIP  146 (635)
T ss_pred             HHHHHHHhhCcHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhc-CCCcc--Cce
Confidence            3444445544444554442      1223345567899999999999999999743  44455566555 44422  112


Q ss_pred             EEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh-hHHHHHHcCCeEEEE
Q 022348          228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVIT  281 (298)
Q Consensus       228 v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~-Di~~a~~aG~~~v~~  281 (298)
                      ++.+.+.-..|.+...|..+++.-++++.+++++||+.. |..+++..|+.+...
T Consensus       147 iY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~  201 (635)
T COG5610         147 IYMSSEFRLKKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY  201 (635)
T ss_pred             eeecceeehhcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence            667777788899999999999999999999999999995 999999999998643

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=97.54  E-value=0.00032  Score=70.13  Aligned_cols=102  Identities=18%  Similarity=0.237  Sum_probs=74.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC----------------------cceEEeCCCCC-
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG----------------------LDCFLAGDDVK-  235 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~----------------------fd~v~~~~~~~-  235 (298)
                      ++.|++.+.++++++.|+++.++|+.....+..+.+++ |+..-..                      -..+++|.+.. 
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~-gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~  646 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV-GIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD  646 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence            46889999999999999999999999999999999988 7732100                      01345543321 


Q ss_pred             -----------------CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          236 -----------------QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       236 -----------------~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                                       .++-.|+-...+.+.+.-...-+.|+||+.||+.|.+.|.++..+.
T Consensus       647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg  709 (997)
T TIGR01106       647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG  709 (997)
T ss_pred             CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecC
Confidence                             2333455545555555434456899999999999999999997654

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=97.45  E-value=0.0015  Score=63.27  Aligned_cols=37  Identities=5%  Similarity=-0.159  Sum_probs=31.2

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcC
Q 022348          237 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG  275 (298)
Q Consensus       237 ~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG  275 (298)
                      +--|..+.+.+++  ++.++.++++||+.||..|.+.++
T Consensus       655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~  691 (726)
T PRK14501        655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALP  691 (726)
T ss_pred             CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcc
Confidence            3445778888887  778899999999999999999973

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=97.44  E-value=0.0017  Score=49.69  Aligned_cols=96  Identities=17%  Similarity=0.161  Sum_probs=57.7

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHH---HHHHHhCCc-cccCcceEEeC-C--------CCCCCCCCHHHHHH
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLIGME-RFEGLDCFLAG-D--------DVKQKKPDPSIYVT  246 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~---~l~~~~~l~-~~~~fd~v~~~-~--------~~~~~KP~~~~~~~  246 (298)
                      ..||+.++.+.++++|+++.-+|+........   .|+++-.-. .+ +.--++.+ +        |+-  .++|+.|+.
T Consensus        28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~l-P~Gpv~~sP~~l~~al~rEvi--~~~p~~fK~  104 (157)
T PF08235_consen   28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNL-PDGPVLLSPDSLFSALHREVI--SKDPEEFKI  104 (157)
T ss_pred             hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccC-CCCCEEECCcchhhhhhcccc--ccChHHHHH
Confidence            66799999999999999999999987554443   333331111 22 11223333 1        222  234544444


Q ss_pred             HH-HHh-CC----CCCcEEEEecChhhHHHHHHcCCeE
Q 022348          247 AA-KRL-GI----SEKDCLVVEDSVIGLQAATRAGMAC  278 (298)
Q Consensus       247 ~~-~~l-gi----~~~~~~~vgD~~~Di~~a~~aG~~~  278 (298)
                      .+ +.+ ..    ...=...+|+...|+.+=+++|+..
T Consensus       105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~  142 (157)
T PF08235_consen  105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPK  142 (157)
T ss_pred             HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCCh
Confidence            33 222 21    1122456899999999999999984

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=97.39  E-value=0.00085  Score=63.40  Aligned_cols=110  Identities=16%  Similarity=0.257  Sum_probs=81.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC-cc-eEEeCCCCC----------------CCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG-LD-CFLAGDDVK----------------QKKPD  240 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~-fd-~v~~~~~~~----------------~~KP~  240 (298)
                      +|+|++.+.++.+++.|+++..+|+.....+..+.++. |+-.... ++ ..+++.++.                ..+-.
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~i-Gi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~  662 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREI-GIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE  662 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHh-CCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence            58899999999999999999999999999999999998 7754311 11 234443321                11234


Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE-cCCCchhH
Q 022348          241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT-YTSSTAEQ  289 (298)
Q Consensus       241 ~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~-~~~~~~~~  289 (298)
                      |+-..++.+.|.-.-+=+.|-||+.||..+.+.|.++..+. +|..-.++
T Consensus       663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKe  712 (972)
T KOG0202|consen  663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKE  712 (972)
T ss_pred             chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHh
Confidence            55666666666656677999999999999999999998765 55544444

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=97.37  E-value=0.00094  Score=67.26  Aligned_cols=41  Identities=12%  Similarity=0.228  Sum_probs=38.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+++ |+-
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~-gii  696 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVAREC-GIV  696 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCC
Confidence            58899999999999999999999999999999999998 774

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>PLN02580 trehalose-phosphatase

Probab=97.29  E-value=0.0058  Score=53.97  Aligned_cols=45  Identities=16%  Similarity=0.115  Sum_probs=35.0

Q ss_pred             CCCHHHHHHHHHHhCCCCCc---EEEEecChhhHHHHHH-----cCCeEEEEc
Q 022348          238 KPDPSIYVTAAKRLGISEKD---CLVVEDSVIGLQAATR-----AGMACVITY  282 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi~~~~---~~~vgD~~~Di~~a~~-----aG~~~v~~~  282 (298)
                      --+....+.+++.+|+...+   .++|||..+|..|.+.     .|+...+-+
T Consensus       300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn  352 (384)
T PLN02580        300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS  352 (384)
T ss_pred             CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec
Confidence            34577999999999988653   3899999999999996     466654443

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=97.25  E-value=0.0017  Score=60.23  Aligned_cols=85  Identities=16%  Similarity=0.210  Sum_probs=65.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .+.|++.+.++.|++.|++++++|+........+.+++ |+  +              +.-.|+-...+.+++.-....+
T Consensus       347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l-gi--~--------------~~~~p~~K~~~v~~l~~~g~~v  409 (499)
T TIGR01494       347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL-GI--F--------------ARVTPEEKAALVEALQKKGRVV  409 (499)
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-Cc--e--------------eccCHHHHHHHHHHHHHCCCEE
Confidence            68899999999999999999999999999888888887 65  1              1123444444444443233679


Q ss_pred             EEEecChhhHHHHHHcCCeEEE
Q 022348          259 LVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      .||||+.||..+.+.++....+
T Consensus       410 ~~vGDg~nD~~al~~Advgia~  431 (499)
T TIGR01494       410 AMTGDGVNDAPALKKADVGIAM  431 (499)
T ss_pred             EEECCChhhHHHHHhCCCcccc
Confidence            9999999999999999877444

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=97.23  E-value=0.0083  Score=51.24  Aligned_cols=102  Identities=19%  Similarity=0.220  Sum_probs=72.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC-----CCCCCH-----------
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK-----QKKPDP-----------  241 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~-----~~KP~~-----------  241 (298)
                      +.-.|....+++.|+++|.++.++||+....+..-...+-|-+.-.-||.|+.-.+-+     ..+|-.           
T Consensus       239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~w  318 (510)
T KOG2470|consen  239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLW  318 (510)
T ss_pred             hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhh
Confidence            3456788999999999999999999999998887666654444322388776532211     111110           


Q ss_pred             --------------HHHHHHHHHhCCCCCcEEEEecCh-hhHHHHH-HcCCeEE
Q 022348          242 --------------SIYVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACV  279 (298)
Q Consensus       242 --------------~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~-~aG~~~v  279 (298)
                                    ......++--|....+++++||.. +|+.... +.||.+-
T Consensus       319 dkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTg  372 (510)
T KOG2470|consen  319 DKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTG  372 (510)
T ss_pred             hhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccc
Confidence                          013444555688888999999999 6999988 8999975

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.21  E-value=0.0034  Score=55.88  Aligned_cols=101  Identities=17%  Similarity=0.185  Sum_probs=79.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCC----CCCCCCHHHHHHHHHHhCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDV----KQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~----~~~KP~~~~~~~~~~~lgi~  254 (298)
                      .+|....+.+..|+++|+-++|+|-++...+.+.++.+        .|.++.-++.    -.+.|+.+-++.++++||+-
T Consensus       255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~kh--------p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg  326 (574)
T COG3882         255 EAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKH--------PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLG  326 (574)
T ss_pred             hhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhC--------CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCC
Confidence            35566788899999999999999999999899999887        2333333322    25789999999999999999


Q ss_pred             CCcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          255 EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       255 ~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      .+..+|++|++...+-.+.-+- ..+++-+..+.
T Consensus       327 ~dSmvFiDD~p~ErE~vk~~~~-v~Vi~~~~Dps  359 (574)
T COG3882         327 LDSMVFIDDNPAERELVKRELP-VSVIEFPEDPS  359 (574)
T ss_pred             ccceEEecCCHHHHHHHHhcCc-eeeccCCCCHH
Confidence            9999999999999999888876 33444444443

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=97.18  E-value=0.0023  Score=51.17  Aligned_cols=95  Identities=16%  Similarity=0.160  Sum_probs=63.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc--ceEEeCC--------CCC--CCCCCHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--DCFLAGD--------DVK--QKKPDPSIYVT  246 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f--d~v~~~~--------~~~--~~KP~~~~~~~  246 (298)
                      ..+|++.++|+.+-+. +.++|-|.+....+..++..+ ++.....+  ..+...+        ..+  ..|+    +..
T Consensus        45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l-~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~~  118 (195)
T TIGR02245        45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTEL-GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LGV  118 (195)
T ss_pred             EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHh-cccCCccceEEEEeccccceeeEeeccCcEEEee----cHH
Confidence            4789999999999995 999999999999999999887 54321101  1122111        111  1233    223


Q ss_pred             HHHHhC--CCCCcEEEEecChhhHHHHHHcCCeEE
Q 022348          247 AAKRLG--ISEKDCLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       247 ~~~~lg--i~~~~~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                      +.+++|  .+.+++++|+|++....+=-..|+..-
T Consensus       119 lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~  153 (195)
T TIGR02245       119 IWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIR  153 (195)
T ss_pred             hhhhcccCCCcccEEEEeCCHHHHhcCCCCccccC
Confidence            333554  377999999999987776666676643

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=97.18  E-value=0.0014  Score=58.81  Aligned_cols=100  Identities=12%  Similarity=0.215  Sum_probs=79.7

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL  259 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~  259 (298)
                      +-||+.|-+.+||+-|++...+|+.++.....+..+. |+++|           +..++|.  -...+.++..-.-.=+.
T Consensus       448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA-GVDdf-----------iAeatPE--dK~~~I~~eQ~~grlVA  513 (681)
T COG2216         448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA-GVDDF-----------IAEATPE--DKLALIRQEQAEGRLVA  513 (681)
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh-Cchhh-----------hhcCChH--HHHHHHHHHHhcCcEEE
Confidence            5689999999999999999999999999999999888 98876           1235654  33334444444556689


Q ss_pred             EEecChhhHHHHHHcCCeEEEEcCCCchhHhhhc
Q 022348          260 VVEDSVIGLQAATRAGMACVITYTSSTAEQVRII  293 (298)
Q Consensus       260 ~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~~  293 (298)
                      |.||+.||..+..+|.....+..|...+++-..+
T Consensus       514 MtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNM  547 (681)
T COG2216         514 MTGDGTNDAPALAQADVGVAMNSGTQAAKEAANM  547 (681)
T ss_pred             EcCCCCCcchhhhhcchhhhhccccHHHHHhhcc
Confidence            9999999999999999998888887777765544

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=97.13  E-value=0.002  Score=65.02  Aligned_cols=41  Identities=17%  Similarity=0.124  Sum_probs=36.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      ++.||+.+.++.|++.|++++++|+.....+..+.... ++-
T Consensus       631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~-~ii  671 (1057)
T TIGR01652       631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSC-RLL  671 (1057)
T ss_pred             hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh-CCC
Confidence            58899999999999999999999999988888887776 553

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=97.04  E-value=0.047  Score=44.00  Aligned_cols=42  Identities=14%  Similarity=0.116  Sum_probs=32.8

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      ..++-||+.+.++.|++. ..-+|+|.+-.++++.....+ |+.
T Consensus        81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~i-g~P  122 (315)
T COG4030          81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMI-GVP  122 (315)
T ss_pred             hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhc-CCC
Confidence            457999999999999987 556777777777777777666 663

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=96.94  E-value=0.0088  Score=51.02  Aligned_cols=88  Identities=16%  Similarity=0.174  Sum_probs=58.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHH---HHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~---~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      .++||+.++|++|+++|++++++||+.......   .++.+ |+..-  .+.++++         .......+++.+...
T Consensus        18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~-G~~~~--~~~i~ts---------~~~~~~~l~~~~~~~   85 (279)
T TIGR01452        18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARL-GFNGL--AEQLFSS---------ALCAARLLRQPPDAP   85 (279)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCCCC--hhhEecH---------HHHHHHHHHhhCcCC
Confidence            488999999999999999999999976443333   44444 55432  3444433         234445555544445


Q ss_pred             CcEEEEecChhhHHHHHHcCCeEE
Q 022348          256 KDCLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                      ..++++|+.. ..+.++..|+..+
T Consensus        86 ~~v~~iG~~~-~~~~l~~~g~~~~  108 (279)
T TIGR01452        86 KAVYVIGEEG-LRAELDAAGIRLA  108 (279)
T ss_pred             CEEEEEcCHH-HHHHHHHCCCEEe
Confidence            6799999853 3455677787743

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=96.82  E-value=0.0041  Score=60.90  Aligned_cols=39  Identities=8%  Similarity=-0.077  Sum_probs=32.0

Q ss_pred             CCCCHHHHHHHHH---HhCCCCCcEEEEecChhhHHHHHHcC
Q 022348          237 KKPDPSIYVTAAK---RLGISEKDCLVVEDSVIGLQAATRAG  275 (298)
Q Consensus       237 ~KP~~~~~~~~~~---~lgi~~~~~~~vgD~~~Di~~a~~aG  275 (298)
                      +--|..+.+.+++   .+|+.++.+++|||+.||..|.+.++
T Consensus       760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~  801 (854)
T PLN02205        760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT  801 (854)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence            3445677888864   46999999999999999999999876

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.73  E-value=0.002  Score=51.42  Aligned_cols=23  Identities=13%  Similarity=-0.000  Sum_probs=19.1

Q ss_pred             cEEEEecChhhHHHHHHcCCeEE
Q 022348          257 DCLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                      -++-+||++||+.+.......++
T Consensus       211 ~t~~~GDg~nD~Pl~ev~d~Afi  233 (274)
T COG3769         211 TTLGLGDGPNDAPLLEVMDYAFI  233 (274)
T ss_pred             EEEecCCCCCcccHHHhhhhhee
Confidence            48999999999999987766544

>PLN03190 aminophospholipid translocase; Provisional

Probab=96.62  E-value=0.0059  Score=61.90  Aligned_cols=37  Identities=22%  Similarity=0.237  Sum_probs=31.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN  215 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~  215 (298)
                      ++.+|+.+.++.|++.|++++++|+.....+..+...
T Consensus       726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s  762 (1178)
T PLN03190        726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS  762 (1178)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence            5899999999999999999999999887766666543

>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway

Probab=96.59  E-value=0.032  Score=48.50  Aligned_cols=46  Identities=17%  Similarity=0.087  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHh----CCCCCcEEEEecCh-----hhHHHHHHcCCeEEEEcCCCchh
Q 022348          241 PSIYVTAAKRL----GISEKDCLVVEDSV-----IGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       241 ~~~~~~~~~~l----gi~~~~~~~vgD~~-----~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      ..+...+.+-+    ++.+++|+||||-.     ||.+ |+.+|. |+|+.+|.+-.
T Consensus       351 s~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfk-aR~a~~-t~WIasP~ETv  405 (408)
T PF06437_consen  351 SLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFK-ARLACT-TAWIASPQETV  405 (408)
T ss_pred             HHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchh-hhhhce-eeEecCHHHHh
Confidence            45667677777    89999999999965     5654 455554 46888775443

; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=96.56  E-value=0.0089  Score=59.53  Aligned_cols=35  Identities=20%  Similarity=0.194  Sum_probs=28.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL  213 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l  213 (298)
                      ++..||.+.++.|++.|+|++++|+...+.+..+.
T Consensus       651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg  685 (1151)
T KOG0206|consen  651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIG  685 (1151)
T ss_pred             hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHH
Confidence            58899999999999999999999987555444433

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=96.45  E-value=0.013  Score=50.79  Aligned_cols=95  Identities=22%  Similarity=0.246  Sum_probs=64.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCC------------hhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAAT------------KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT  246 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~------------~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~  246 (298)
                      .++|.+..=|..|.+.|+.++|.||..            ..-+++++..+ ++.    |........-...||...+++.
T Consensus       104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl-~vP----i~~~~A~~~~~yRKP~tGMwe~  178 (422)
T KOG2134|consen  104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANL-GVP----IQLLAAIIKGKYRKPSTGMWEF  178 (422)
T ss_pred             eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhc-CCc----eEEeeeccCCcccCcchhHHHH
Confidence            366777778888899999999999853            22234445443 443    3333333334588999999999


Q ss_pred             HHHHhC----CCCCcEEEEecCh---------------hhHHHHHHcCCeE
Q 022348          247 AAKRLG----ISEKDCLVVEDSV---------------IGLQAATRAGMAC  278 (298)
Q Consensus       247 ~~~~lg----i~~~~~~~vgD~~---------------~Di~~a~~aG~~~  278 (298)
                      ..+.++    |....++||||-.               .|+.-|.++|+..
T Consensus       179 ~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF  229 (422)
T KOG2134|consen  179 LKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKF  229 (422)
T ss_pred             HHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCcc
Confidence            987653    3345667888732               4788899988775

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=96.38  E-value=0.0031  Score=48.88  Aligned_cols=94  Identities=21%  Similarity=0.306  Sum_probs=62.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      +.++||+.++|+.+.+. +.++|.|.+....+..+++.+..-..+  |+.++..+.....+-   .+.+-++.+|.+.++
T Consensus        35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~--~~~~~~r~~~~~~~~---~~~KdL~~l~~~~~~  108 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKL--FSRRLYRDDCTFDKG---SYIKDLSKLGRDLDN  108 (159)
T ss_dssp             EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSS--EEEEEEGGGSEEETT---EEE--GGGSSS-GGG
T ss_pred             EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhccc--ccccccccccccccc---ccccchHHHhhcccc
Confidence            56899999999999776 999999999999999999998332444  777776654321111   011356667878899


Q ss_pred             EEEEecChhhHHHHHHcCCe
Q 022348          258 CLVVEDSVIGLQAATRAGMA  277 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~  277 (298)
                      +++|+|++.-...-...|+.
T Consensus       109 vvivDD~~~~~~~~~~N~i~  128 (159)
T PF03031_consen  109 VVIVDDSPRKWALQPDNGIP  128 (159)
T ss_dssp             EEEEES-GGGGTTSGGGEEE
T ss_pred             EEEEeCCHHHeeccCCceEE
Confidence            99999999755443444544

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.34  E-value=0.0064  Score=49.60  Aligned_cols=98  Identities=12%  Similarity=0.123  Sum_probs=62.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcc-eEEeCCCCC----CCCCCH-------HHH
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD-CFLAGDDVK----QKKPDP-------SIY  244 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd-~v~~~~~~~----~~KP~~-------~~~  244 (298)
                      .+.+..|+.+++..|+++++++.|.|.+-...++..+.+.+++.....|- ....-++.+    ..+|--       ...
T Consensus       136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~  215 (298)
T KOG3128|consen  136 NIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVL  215 (298)
T ss_pred             hHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHH
Confidence            34577899999999999999999999999988888888875655421111 111111111    111111       122


Q ss_pred             HHHHHHhC--CCCCcEEEEecChhhHHHHHHc
Q 022348          245 VTAAKRLG--ISEKDCLVVEDSVIGLQAATRA  274 (298)
Q Consensus       245 ~~~~~~lg--i~~~~~~~vgD~~~Di~~a~~a  274 (298)
                      +...+.+.  -...++++.||+..|+.|+..+
T Consensus       216 ~~~s~yf~~~~~~~nVillGdsigdl~ma~gv  247 (298)
T KOG3128|consen  216 QNESEYFHQLAGRVNVILLGDSIGDLHMADGV  247 (298)
T ss_pred             HhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence            22233332  2356899999999999998765

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.33  E-value=0.032  Score=41.95  Aligned_cols=95  Identities=24%  Similarity=0.305  Sum_probs=57.2

Q ss_pred             CChhHHHHHHHHHHC-C-CeEEEEeCCChh-------hHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHH
Q 022348          180 PRPGVLRLMDEAKAA-G-KKVAVCSAATKS-------SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKR  250 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~-g-~~i~i~S~~~~~-------~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~  250 (298)
                      +.|....-++++|.. | ..++++||.-..       ...+.++.-.|+.-+            -..+-+|.+-....+.
T Consensus        62 Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpVl------------RHs~kKP~ct~E~~~y  129 (190)
T KOG2961|consen   62 IWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPVL------------RHSVKKPACTAEEVEY  129 (190)
T ss_pred             cCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCceE------------eecccCCCccHHHHHH
Confidence            445555555555543 2 678899886321       122333333344322            1122233344444443


Q ss_pred             h-C----CCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCCc
Q 022348          251 L-G----ISEKDCLVVEDSV-IGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       251 l-g----i~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      + |    ..+++++||||.. .|+.+|...|..+||+..+.-
T Consensus       130 ~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~  171 (190)
T KOG2961|consen  130 HFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR  171 (190)
T ss_pred             HhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence            3 4    4689999999999 699999999999998876543

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=96.28  E-value=0.013  Score=48.39  Aligned_cols=108  Identities=19%  Similarity=0.231  Sum_probs=58.9

Q ss_pred             HHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcce---EEeCCCCC----CCCCCH
Q 022348          169 YQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC---FLAGDDVK----QKKPDP  241 (298)
Q Consensus       169 ~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~---v~~~~~~~----~~KP~~  241 (298)
                      ..+.+....+.+++|+.++++.|.++++++.|+|.+-...+...+++. +... ..+..   ...-++.+    ..-|--
T Consensus        80 i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~-~~~~-~Nv~VvSN~M~Fd~~g~l~gF~~~lI  157 (246)
T PF05822_consen   80 IEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQA-GVFH-PNVKVVSNFMDFDEDGVLVGFKGPLI  157 (246)
T ss_dssp             HHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHT-T--B-TTEEEEEE-EEE-TTSBEEEE-SS--
T ss_pred             HHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHc-CCCC-CCeEEEeeeEEECCcceEeecCCCce
Confidence            444445567789999999999999999999999999999999999997 5432 11111   11111111    111111


Q ss_pred             HHHHHH---------HHHhCCCCCcEEEEecChhhHHHHHHc-CCeEE
Q 022348          242 SIYVTA---------AKRLGISEKDCLVVEDSVIGLQAATRA-GMACV  279 (298)
Q Consensus       242 ~~~~~~---------~~~lgi~~~~~~~vgD~~~Di~~a~~a-G~~~v  279 (298)
                      ..|.+-         .+++. ...+++.+||+..|+.|+..+ ....+
T Consensus       158 H~~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~  204 (246)
T PF05822_consen  158 HTFNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGVPDEENV  204 (246)
T ss_dssp             -TT-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-S--SEE
T ss_pred             EEeeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCCCccccE
Confidence            111111         11221 357899999999999998776 44443

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=96.17  E-value=0.037  Score=50.29  Aligned_cols=91  Identities=11%  Similarity=-0.061  Sum_probs=51.5

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcce------EEeCCCCCCCCCCHHH-HHHHHHHhCCCCCcEE
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC------FLAGDDVKQKKPDPSI-YVTAAKRLGISEKDCL  259 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~------v~~~~~~~~~KP~~~~-~~~~~~~lgi~~~~~~  259 (298)
                      .++..+..| +++|+|.....+++..++.++|.+..-+-+.      .++|--.  ++...+. ...+.+.+|- ....+
T Consensus       101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~--G~n~~ek~~~rl~~~~g~-~~~~v  176 (498)
T PLN02499        101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIR--GTDVDQSVANRVANLFVD-ERPQL  176 (498)
T ss_pred             HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEe--cCccHHHHHHHHHHHhCc-cCcee
Confidence            455667788 9999999999999999999546653311111      1111111  2222333 3344445663 23467


Q ss_pred             EEecChhhHHHHHHcCCeEEEEcC
Q 022348          260 VVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       260 ~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      -+||+..|-.-..-  ++-+++..
T Consensus       177 g~~~~~~~~~f~~~--ck~~~~~~  198 (498)
T PLN02499        177 GLGRISASSSFLSL--CKEQIHPP  198 (498)
T ss_pred             cccCCcccchhhhh--CceEEecC
Confidence            78887766555444  33444443

>PRK10444 UMP phosphatase; Provisional

Probab=96.07  E-value=0.05  Score=45.52  Aligned_cols=102  Identities=12%  Similarity=0.163  Sum_probs=60.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHh--CCccccCcceEEeCCCC--------CCCC---CCHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI--GMERFEGLDCFLAGDDV--------KQKK---PDPSIYV  245 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~--~l~~~~~fd~v~~~~~~--------~~~K---P~~~~~~  245 (298)
                      .++||+.++++.|+++|+++.++||+.........+++.  |+.-  ..+.++++...        +..+   .-...+.
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~--~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~   94 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDV--PDSVFYTSAMATADFLRRQEGKKAYVIGEGALI   94 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC--CHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHH
Confidence            578999999999999999999999998766555555541  4432  13556655210        0000   0112334


Q ss_pred             HHHHHhCCC----CCcEEEEecChh-hHHHHH------HcCCeEEEEc
Q 022348          246 TAAKRLGIS----EKDCLVVEDSVI-GLQAAT------RAGMACVITY  282 (298)
Q Consensus       246 ~~~~~lgi~----~~~~~~vgD~~~-Di~~a~------~aG~~~v~~~  282 (298)
                      ..+++.|+.    ..++++||...+ +.....      +.|...+..+
T Consensus        95 ~~l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n  142 (248)
T PRK10444         95 HELYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATN  142 (248)
T ss_pred             HHHHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEEC
Confidence            444555553    236777886653 433322      3377766544

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=95.83  E-value=0.026  Score=41.77  Aligned_cols=87  Identities=16%  Similarity=0.140  Sum_probs=52.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC--ChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAA--TKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~--~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      +.+.|++.+.+++|-+. +.++|+|..  -+.......+++..--+|.....++.+..    |             |+-.
T Consensus        67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn----K-------------nivk  128 (180)
T COG4502          67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN----K-------------NIVK  128 (180)
T ss_pred             cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC----C-------------CeEE
Confidence            37889999999999998 899999987  34445555555533323322233332221    2             2211


Q ss_pred             CcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          256 KDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      . =++|+|++.+++..+  |++ |+....++
T Consensus       129 a-DilIDDnp~nLE~F~--G~k-IlFdA~HN  155 (180)
T COG4502         129 A-DILIDDNPLNLENFK--GNK-ILFDAHHN  155 (180)
T ss_pred             e-eEEecCCchhhhhcc--Cce-EEEecccc
Confidence            1 278999998888654  454 44444444

>PLN02151 trehalose-phosphatase

Probab=95.75  E-value=0.082  Score=46.28  Aligned_cols=36  Identities=11%  Similarity=-0.045  Sum_probs=27.3

Q ss_pred             CCHHHHHHHHHHhCCCCC---cEEEEecChhhHHHHHHc
Q 022348          239 PDPSIYVTAAKRLGISEK---DCLVVEDSVIGLQAATRA  274 (298)
Q Consensus       239 P~~~~~~~~~~~lgi~~~---~~~~vgD~~~Di~~a~~a  274 (298)
                      -+....+.++++++..-.   -.+|+||...|-.+.+.+
T Consensus       269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L  307 (354)
T PLN02151        269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKIL  307 (354)
T ss_pred             CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHH
Confidence            356788999999876532   279999999988776654

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=95.49  E-value=0.16  Score=42.54  Aligned_cols=101  Identities=20%  Similarity=0.179  Sum_probs=60.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCC---hhhHHHHHHHHhCCccccCcceEEeCCCC-----CCCCCC-------HHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAAT---KSSVILCLENLIGMERFEGLDCFLAGDDV-----KQKKPD-------PSI  243 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~---~~~~~~~l~~~~~l~~~~~fd~v~~~~~~-----~~~KP~-------~~~  243 (298)
                      .+.|++.++|++|+++|++++++||+.   .......++.+ |+...  .|.++++...     ...++.       ...
T Consensus        17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~-g~~~~--~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~   93 (249)
T TIGR01457        17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF-DIPAT--LETVFTASMATADYMNDLKLEKTVYVIGEEG   93 (249)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCCCC--hhhEeeHHHHHHHHHHhcCCCCEEEEEcChh
Confidence            467899999999999999999999955   44555666666 76543  5667665320     011111       123


Q ss_pred             HHHHHHHhCCC----CCcEEEEecCh-h---hHHHHH---HcCCeEEEEc
Q 022348          244 YVTAAKRLGIS----EKDCLVVEDSV-I---GLQAAT---RAGMACVITY  282 (298)
Q Consensus       244 ~~~~~~~lgi~----~~~~~~vgD~~-~---Di~~a~---~aG~~~v~~~  282 (298)
                      +...++..|+.    ..+.+++|... .   ++..+.   +.|...+..+
T Consensus        94 l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN  143 (249)
T TIGR01457        94 LKEAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTN  143 (249)
T ss_pred             HHHHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEEC
Confidence            55566666753    23567777532 2   332221   4587766544

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=95.39  E-value=0.056  Score=45.85  Aligned_cols=89  Identities=19%  Similarity=0.174  Sum_probs=50.5

Q ss_pred             CChhHHHHHHHHHHC----CCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          180 PRPGVLRLMDEAKAA----GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~----g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      +.||+.+.++.|.++    .++...+||+....-....+++   ...  .++-+..+.+-...   ..|+.+. ++  .-
T Consensus        52 ~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~l---S~~--Lgv~Vs~dqviqSH---sP~r~l~-~~--~~  120 (389)
T KOG1618|consen   52 PIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQEL---SAL--LGVEVSADQVIQSH---SPFRLLV-EY--HY  120 (389)
T ss_pred             CCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHH---HHh--hCCccCHHHHHhhc---ChHHHHh-hh--hh
Confidence            555666677777666    6889999998754333333332   111  12222222222111   1344444 22  34


Q ss_pred             CcEEEEecChhhHHHHHHcCCeEEE
Q 022348          256 KDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ++++++|+. +-.+-|+..|++-|+
T Consensus       121 k~vLv~G~~-~vr~vAegyGFk~Vv  144 (389)
T KOG1618|consen  121 KRVLVVGQG-SVREVAEGYGFKNVV  144 (389)
T ss_pred             ceEEEecCC-cHHHHhhccCcccee
Confidence            789999954 456678889999876

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=95.27  E-value=0.32  Score=45.81  Aligned_cols=27  Identities=15%  Similarity=0.179  Sum_probs=23.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAAT  205 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~  205 (298)
                      ++..++...|+.||..|++++.+|+..
T Consensus       658 kLQ~dVk~tLElLRNAgikiWMLTGDK  684 (1051)
T KOG0210|consen  658 KLQDDVKPTLELLRNAGIKIWMLTGDK  684 (1051)
T ss_pred             HHhhhhHhHHHHHhhcCcEEEEEcCcc
Confidence            577889999999999999999998753

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=94.98  E-value=0.29  Score=40.58  Aligned_cols=71  Identities=17%  Similarity=0.175  Sum_probs=44.0

Q ss_pred             CCeEEEEeCCChhhHHHHHHHH--hCCccccCcc-eEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHH
Q 022348          195 GKKVAVCSAATKSSVILCLENL--IGMERFEGLD-CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA  271 (298)
Q Consensus       195 g~~i~i~S~~~~~~~~~~l~~~--~~l~~~~~fd-~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a  271 (298)
                      -+++++||..+...-+..++.+  ||+.    +| +.+-+   |..|  ..    +++.++-.    +|++|....++.|
T Consensus       186 piRtalVTAR~apah~RvI~TLr~Wgv~----vDEafFLg---G~~K--~~----vL~~~~ph----IFFDDQ~~H~~~a  248 (264)
T PF06189_consen  186 PIRTALVTARSAPAHERVIRTLRSWGVR----VDEAFFLG---GLPK--GP----VLKAFRPH----IFFDDQDGHLESA  248 (264)
T ss_pred             ceEEEEEEcCCCchhHHHHHHHHHcCCc----HhHHHHhC---CCch--hH----HHHhhCCC----EeecCchhhhhHh
Confidence            4889999987754444444433  2554    33 33222   2223  22    66666532    8999999999999


Q ss_pred             HHcCCeEEEEcC
Q 022348          272 TRAGMACVITYT  283 (298)
Q Consensus       272 ~~aG~~~v~~~~  283 (298)
                      . .++.++.|+-
T Consensus       249 ~-~~vps~hVP~  259 (264)
T PF06189_consen  249 S-KVVPSGHVPY  259 (264)
T ss_pred             h-cCCCEEeccC
Confidence            8 7777775543

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=94.96  E-value=0.37  Score=48.20  Aligned_cols=50  Identities=14%  Similarity=0.003  Sum_probs=41.0

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcE-EEEecChh-hHHHHHHcCCeEEEEcC
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDC-LVVEDSVI-GLQAATRAGMACVITYT  283 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~-~~vgD~~~-Di~~a~~aG~~~v~~~~  283 (298)
                      ++..-.+...++++..++|++.+++ +|+||+.| |++....--..+|++-|
T Consensus       951 lP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468       951 IPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred             eeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence            4555667889999999999999999 55999999 99988655556777777

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=94.63  E-value=0.34  Score=40.15  Aligned_cols=86  Identities=17%  Similarity=0.228  Sum_probs=52.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHH---HHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC---LENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~---l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      .++|++.+.|..++++|+++.++||+........   +..+.++.-  .++.++++.         ......+++.+ ..
T Consensus        14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~--~~~~iits~---------~~~~~~l~~~~-~~   81 (236)
T TIGR01460        14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDV--SPDQIITSG---------SVTKDLLRQRF-EG   81 (236)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCC--CHHHeeeHH---------HHHHHHHHHhC-CC
Confidence            4788999999999999999999998875444443   444224432  245555442         22233333322 22


Q ss_pred             CcEEEEecChhhHHHHHHcCCe
Q 022348          256 KDCLVVEDSVIGLQAATRAGMA  277 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~  277 (298)
                      +.++++|.. ...+.++..|+.
T Consensus        82 ~~v~v~G~~-~~~~~l~~~g~~  102 (236)
T TIGR01460        82 EKVYVIGVG-ELRESLEGLGFR  102 (236)
T ss_pred             CEEEEECCH-HHHHHHHHcCCc
Confidence            457888853 345555666653

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PLN03017 trehalose-phosphatase

Probab=94.44  E-value=0.091  Score=46.20  Aligned_cols=34  Identities=12%  Similarity=-0.028  Sum_probs=23.2

Q ss_pred             HHHHHHHHHHhCCCC---CcEEEEecChhhHHHHHHc
Q 022348          241 PSIYVTAAKRLGISE---KDCLVVEDSVIGLQAATRA  274 (298)
Q Consensus       241 ~~~~~~~~~~lgi~~---~~~~~vgD~~~Di~~a~~a  274 (298)
                      ....+.+++.+|...   .-.+|+||...|-.+.+.+
T Consensus       285 G~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L  321 (366)
T PLN03017        285 GKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKML  321 (366)
T ss_pred             HHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHH
Confidence            345666666666542   2479999999887776655

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=94.35  E-value=0.058  Score=45.34  Aligned_cols=43  Identities=9%  Similarity=-0.040  Sum_probs=29.6

Q ss_pred             CHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcC---CeEEEEc
Q 022348          240 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG---MACVITY  282 (298)
Q Consensus       240 ~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG---~~~v~~~  282 (298)
                      +...+..++++++....-+++.||...|=.+-+.+.   -.+|.+.
T Consensus       183 KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~  228 (266)
T COG1877         183 KGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG  228 (266)
T ss_pred             hHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEec
Confidence            466777788877666556899999997766666554   4455333

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=94.22  E-value=0.074  Score=44.77  Aligned_cols=49  Identities=24%  Similarity=0.336  Sum_probs=37.1

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhh---HHHHHHHHhCCccccCcceEEeC
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLAG  231 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~---~~~~l~~~~~l~~~~~fd~v~~~  231 (298)
                      ++||+.+++++|+++|++++++||+....   ....++.+ |++-  ..+.++++
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~-g~~~--~~~~i~ts   73 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRL-GFDI--SEDEVFTP   73 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHc-CCCC--CHHHeEcH
Confidence            89999999999999999999999987664   44555555 6642  24555554

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=94.10  E-value=0.19  Score=48.38  Aligned_cols=106  Identities=17%  Similarity=0.193  Sum_probs=70.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC----------------CCCCCH-
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK----------------QKKPDP-  241 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~----------------~~KP~~-  241 (298)
                      +.+||+.+.++.++..|+.+--+|+.+-..++.+..+. |+..-.+-..++.+.+..                -...+| 
T Consensus       647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eC-GILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~  725 (1034)
T KOG0204|consen  647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIAREC-GILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN  725 (1034)
T ss_pred             CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHc-ccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence            47899999999999999999999999999999999998 776432211344443321                001111 


Q ss_pred             --HHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE-EcCCCchh
Q 022348          242 --SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI-TYTSSTAE  288 (298)
Q Consensus       242 --~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~-~~~~~~~~  288 (298)
                        ..+-+.+++.   .+-+.+-||+.||-.+.+.|.++..| +.|..-++
T Consensus       726 DK~lLVk~L~~~---g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAK  772 (1034)
T KOG0204|consen  726 DKHLLVKGLIKQ---GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAK  772 (1034)
T ss_pred             hHHHHHHHHHhc---CcEEEEecCCCCCchhhhhcccchhccccchhhhh
Confidence              1222233322   24466779999999999999988774 44443333

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=92.45  E-value=0.5  Score=44.49  Aligned_cols=60  Identities=20%  Similarity=0.212  Sum_probs=49.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKK  238 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~K  238 (298)
                      .++++|++.++|+++.+. +.+.|+|-+.+..+..+++.+-.-..|++ |.|++.++-+..|
T Consensus       199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~-dRIisrde~~~~k  258 (635)
T KOG0323|consen  199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFG-DRIISRDESPFFK  258 (635)
T ss_pred             EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCcccc-ceEEEecCCCccc
Confidence            357999999999999988 99999999999999999988745556644 7888888755444

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=92.16  E-value=0.19  Score=48.17  Aligned_cols=40  Identities=10%  Similarity=0.256  Sum_probs=34.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM  219 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l  219 (298)
                      ++.|+..+.+++|.+.++++..+|+.+...+-+..+++ ++
T Consensus       675 PlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v-~i  714 (1160)
T KOG0209|consen  675 PLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEV-GI  714 (1160)
T ss_pred             CCCccHHHHHHHHhccCceEEEEeCCCccchheehhee-ee
Confidence            57889999999999999999999999887777766665 44

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=91.50  E-value=2.8  Score=35.66  Aligned_cols=95  Identities=16%  Similarity=0.195  Sum_probs=57.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHh--CCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI--GMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~--~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      .+.||+.+.+..|++.|..+.++||+.....+...++..  |..+... +.++        -|.-.+..++ ++..-..+
T Consensus        38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e-~~i~--------ssa~~~a~yl-k~~~~~~k  107 (306)
T KOG2882|consen   38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKE-ENIF--------SSAYAIADYL-KKRKPFGK  107 (306)
T ss_pred             CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCc-cccc--------ChHHHHHHHH-HHhCcCCC
Confidence            589999999999999999999999998776665555431  4443211 1111        2223333333 23233446


Q ss_pred             cEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          257 DCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      .++++|-..- -+.++++|+.+......
T Consensus       108 ~Vyvig~~gi-~~eL~~aG~~~~g~~~~  134 (306)
T KOG2882|consen  108 KVYVIGEEGI-REELDEAGFEYFGGGPD  134 (306)
T ss_pred             eEEEecchhh-hHHHHHcCceeecCCCC
Confidence            7777774432 34566778776544433

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=91.39  E-value=0.54  Score=41.45  Aligned_cols=102  Identities=14%  Similarity=0.115  Sum_probs=71.9

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCC---------------------------
Q 022348          181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD---------------------------  233 (298)
Q Consensus       181 ~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~---------------------------  233 (298)
                      .+....++..+++.|.++.++||.+-.........+.+.+...-||.++....                           
T Consensus       200 d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~  279 (424)
T KOG2469|consen  200 DGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNT  279 (424)
T ss_pred             cCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccC
Confidence            34455589999999999999999998888777777756332222676655420                           


Q ss_pred             ---CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh-hHHH-HHHcCCeEEEEc
Q 022348          234 ---VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQA-ATRAGMACVITY  282 (298)
Q Consensus       234 ---~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~-Di~~-a~~aG~~~v~~~  282 (298)
                         ...+++++.....++..+++...+++++||+.. |+.- -+.-|+.++++-
T Consensus       280 ~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~  333 (424)
T KOG2469|consen  280 GPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVA  333 (424)
T ss_pred             CcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEe
Confidence               012334556677788888888899999999995 6654 456799987543

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=91.02  E-value=1.4  Score=32.31  Aligned_cols=84  Identities=14%  Similarity=0.110  Sum_probs=57.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChh-hHHHHHHHHhCCcccc-------CcceEEeCCCCCCCCCCHHHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKS-SVILCLENLIGMERFE-------GLDCFLAGDDVKQKKPDPSIYVTAAK  249 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~-~~~~~l~~~~~l~~~~-------~fd~v~~~~~~~~~KP~~~~~~~~~~  249 (298)
                      ..+|+++...|..|++.|+.++++|++... .+...|+.+ .+....       .|+.+..++-     .+...|..+-+
T Consensus        43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f-kvk~~Gvlkps~e~ft~~~~g~g-----sklghfke~~n  116 (144)
T KOG4549|consen   43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF-KVKQTGVLKPSLEEFTFEAVGDG-----SKLGHFKEFTN  116 (144)
T ss_pred             eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh-ccCcccccchhhhcCceeeecCc-----ccchhHHHHhh
Confidence            468999999999999999999999998754 455566665 554321       1233332221     22345566667


Q ss_pred             HhCCCCCcEEEEecChhh
Q 022348          250 RLGISEKDCLVVEDSVIG  267 (298)
Q Consensus       250 ~lgi~~~~~~~vgD~~~D  267 (298)
                      .-|+.-++..+++|-..+
T Consensus       117 ~s~~~~k~~~~fdDesrn  134 (144)
T KOG4549|consen  117 NSNSIEKNKQVFDDESRN  134 (144)
T ss_pred             ccCcchhceeeecccccC
Confidence            778888888888887654

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=90.96  E-value=0.96  Score=39.43  Aligned_cols=86  Identities=15%  Similarity=0.086  Sum_probs=57.0

Q ss_pred             CCChhHHHHHHHHHHC----CCeEEEEeCCChhh---HHHHH-HHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAA----GKKVAVCSAATKSS---VILCL-ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKR  250 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~----g~~i~i~S~~~~~~---~~~~l-~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~  250 (298)
                      .+.||+.++++.|+++    |+++.++||+....   ....+ +.+ |+.--  .+.++.+.         .....++++
T Consensus        16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l-G~~~~--~~~i~~s~---------~~~~~ll~~   83 (321)
T TIGR01456        16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL-GVDVS--PLQVIQSH---------SPYKSLVNK   83 (321)
T ss_pred             cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc-CCCCC--HHHHHhhh---------HHHHHHHHH
Confidence            4689999999999998    99999999997332   22333 454 66421  33444331         133445555


Q ss_pred             hCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          251 LGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       251 lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ++   ..+++||.+. -.+.++..|+..++
T Consensus        84 ~~---~~v~viG~~~-~~~~l~~~G~~~vv  109 (321)
T TIGR01456        84 YE---KRILAVGTGS-VRGVAEGYGFQNVV  109 (321)
T ss_pred             cC---CceEEEeChH-HHHHHHHcCCcccc
Confidence            43   2689999765 57777899988654

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=90.55  E-value=0.61  Score=39.57  Aligned_cols=42  Identities=21%  Similarity=0.271  Sum_probs=37.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                      .+.+++.++|+.|+++|++++++|+.....+...++.+ ++..
T Consensus        21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l-~l~~   62 (273)
T PRK00192         21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKEL-GLED   62 (273)
T ss_pred             cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCC
Confidence            35678899999999999999999999999899999888 7764

>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional

Probab=90.18  E-value=4.2  Score=33.26  Aligned_cols=90  Identities=21%  Similarity=0.315  Sum_probs=58.1

Q ss_pred             HHHHHHC-CCeEEEEeCCCh---hhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEec
Q 022348          188 MDEAKAA-GKKVAVCSAATK---SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVED  263 (298)
Q Consensus       188 l~~L~~~-g~~i~i~S~~~~---~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD  263 (298)
                      |.+..++ ++.+-+++.+..   ..+.......  +..|. +|.++..... ..-|-|..-+.+++.-|++   |++|||
T Consensus        23 lDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~--~~~~~-pDf~i~isPN-~a~PGP~~ARE~l~~~~iP---~IvI~D   95 (277)
T PRK00994         23 LDERADREDIDVRVVGSGAKMGPEEVEEVVKKM--LEEWK-PDFVIVISPN-PAAPGPKKAREILKAAGIP---CIVIGD   95 (277)
T ss_pred             HHhhhcccCceEEEeccCCCCCHHHHHHHHHHH--HHhhC-CCEEEEECCC-CCCCCchHHHHHHHhcCCC---EEEEcC
Confidence            3344444 788999988753   3333222222  12222 4654433322 2457777889999998984   899999


Q ss_pred             Chh--hHHHHHHcCCeEEEEcCC
Q 022348          264 SVI--GLQAATRAGMACVITYTS  284 (298)
Q Consensus       264 ~~~--Di~~a~~aG~~~v~~~~~  284 (298)
                      .+.  +.+..+..|++.|++...
T Consensus        96 ~p~~K~~d~l~~~g~GYIivk~D  118 (277)
T PRK00994         96 APGKKVKDAMEEQGLGYIIVKAD  118 (277)
T ss_pred             CCccchHHHHHhcCCcEEEEecC
Confidence            994  779999999999976643

>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences

Probab=90.01  E-value=8.3  Score=31.71  Aligned_cols=97  Identities=14%  Similarity=0.164  Sum_probs=61.5

Q ss_pred             CCCCChhHHHHHH---HHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC--CCCCCHHHHHHHHHHh
Q 022348          177 TVEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK--QKKPDPSIYVTAAKRL  251 (298)
Q Consensus       177 ~~~~~pg~~~~l~---~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~--~~KP~~~~~~~~~~~l  251 (298)
                      ...++|+..++++   .|-+.|+.+.-+++.+....+ .|+.. |-.     -...-+..+|  .+--++..++.++++.
T Consensus       102 ~~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~ak-rL~d~-Gca-----avMPlgsPIGSg~Gi~n~~~l~~i~~~~  174 (247)
T PF05690_consen  102 DKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAK-RLEDA-GCA-----AVMPLGSPIGSGRGIQNPYNLRIIIERA  174 (247)
T ss_dssp             TTT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHH-HHHHT-T-S-----EBEEBSSSTTT---SSTHHHHHHHHHHG
T ss_pred             CCCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHH-HHHHC-CCC-----EEEecccccccCcCCCCHHHHHHHHHhc
Confidence            3467888888774   688899999999999988554 44444 432     1222333343  4456789999999999


Q ss_pred             CCCCCcEEEEecCh---hhHHHHHHcCCeEEEEcCC
Q 022348          252 GISEKDCLVVEDSV---IGLQAATRAGMACVITYTS  284 (298)
Q Consensus       252 gi~~~~~~~vgD~~---~Di~~a~~aG~~~v~~~~~  284 (298)
                      +++    +.|+=+.   +|...|-+.|+..|++|+.
T Consensus       175 ~vP----vIvDAGiG~pSdaa~AMElG~daVLvNTA  206 (247)
T PF05690_consen  175 DVP----VIVDAGIGTPSDAAQAMELGADAVLVNTA  206 (247)
T ss_dssp             SSS----BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred             CCc----EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence            875    5666554   7999999999999988753

ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=89.85  E-value=1.6  Score=40.90  Aligned_cols=94  Identities=18%  Similarity=0.227  Sum_probs=54.6

Q ss_pred             hHHHHHHHHHHCCCeEEEEeCCCh---hhHHHHHHHHhCCccccCcce-EEeC-C--------CCCCCCCCH---HHHHH
Q 022348          183 GVLRLMDEAKAAGKKVAVCSAATK---SSVILCLENLIGMERFEGLDC-FLAG-D--------DVKQKKPDP---SIYVT  246 (298)
Q Consensus       183 g~~~~l~~L~~~g~~i~i~S~~~~---~~~~~~l~~~~~l~~~~~fd~-v~~~-~--------~~~~~KP~~---~~~~~  246 (298)
                      ||.+|...++++|+++.-||....   ...+..|..+ .-+...-.|. |+.+ +        |+-..||..   .++..
T Consensus       562 GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv-~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~D  640 (738)
T KOG2116|consen  562 GVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNV-EQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTD  640 (738)
T ss_pred             hHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHH-hhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHH
Confidence            888999999999999999998643   3344455554 2222111221 2222 2        233456542   12222


Q ss_pred             HHHHhCCCCCc--EEEEecChhhHHHHHHcCCeE
Q 022348          247 AAKRLGISEKD--CLVVEDSVIGLQAATRAGMAC  278 (298)
Q Consensus       247 ~~~~lgi~~~~--~~~vgD~~~Di~~a~~aG~~~  278 (298)
                      +.+.+. +-.+  ..-||+..+|+-.=+++|++-
T Consensus       641 Ik~LF~-p~~nPFYAgFGNR~TDviSY~~VgVP~  673 (738)
T KOG2116|consen  641 IKNLFP-PSGNPFYAGFGNRITDVISYRQVGVPL  673 (738)
T ss_pred             HHHhcC-CCCCceeeecCCCcccceeeeeecCCc
Confidence            222233 1122  456889999999999999884

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=89.36  E-value=0.6  Score=41.53  Aligned_cols=96  Identities=18%  Similarity=0.234  Sum_probs=48.7

Q ss_pred             hHHHHHHHHHHCCCeEEEEeCCChhhHHH---HHHHHh--CCcccc-----CcceEEeC--CCCCCCCCCH--HHHHHHH
Q 022348          183 GVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLI--GMERFE-----GLDCFLAG--DDVKQKKPDP--SIYVTAA  248 (298)
Q Consensus       183 g~~~~l~~L~~~g~~i~i~S~~~~~~~~~---~l~~~~--~l~~~~-----~fd~v~~~--~~~~~~KP~~--~~~~~~~  248 (298)
                      ||..+...+-.+|+++.-+|.........   .+....  |-....     ..|..+++  +++-..||.-  -+|..-+
T Consensus       407 gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpdgpviLspd~t~aal~relIlrkpE~FKiayLndl  486 (580)
T COG5083         407 GVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPDGPVILSPDRTMAALYRELILRKPEVFKIAYLNDL  486 (580)
T ss_pred             chhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCCCCEeeccchhhhhhhhhhhhcChHHHHHHHHHHH
Confidence            45555556667888888888765333322   222110  111110     01222222  2233445432  1222223


Q ss_pred             HHhCCCCCcEE-EEecChhhHHHHHHcCCeE
Q 022348          249 KRLGISEKDCL-VVEDSVIGLQAATRAGMAC  278 (298)
Q Consensus       249 ~~lgi~~~~~~-~vgD~~~Di~~a~~aG~~~  278 (298)
                      +.+++.+.-.+ -+|+...|+..=+..|++.
T Consensus       487 ~slf~e~~PFyAGFGNriTDvisY~~vgIp~  517 (580)
T COG5083         487 KSLFIEFDPFYAGFGNRITDVISYSNVGIPK  517 (580)
T ss_pred             HHhhCcCChhhccccccchhheeeccccCCh
Confidence            45566654333 5899999999999998874

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=88.38  E-value=0.25  Score=38.14  Aligned_cols=15  Identities=33%  Similarity=0.764  Sum_probs=12.4

Q ss_pred             cEEEEecCCccccch
Q 022348           68 QALIFDCDGVIIESE   82 (298)
Q Consensus        68 k~viFD~DGTL~d~~   82 (298)
                      |+++||+||||+...
T Consensus         1 k~LVlDLD~TLv~~~   15 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSS   15 (159)
T ss_dssp             EEEEEE-CTTTEEEE
T ss_pred             CEEEEeCCCcEEEEe
Confidence            689999999999875

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=88.14  E-value=1.7  Score=36.65  Aligned_cols=41  Identities=27%  Similarity=0.348  Sum_probs=36.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+.+...+.|++|+++|++++++|+.....+...++.+ ++.
T Consensus        20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~   60 (270)
T PRK10513         20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKEL-HME   60 (270)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHh-CCC
Confidence            36677889999999999999999999999888888887 764

>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain

Probab=88.10  E-value=0.73  Score=37.81  Aligned_cols=46  Identities=30%  Similarity=0.367  Sum_probs=38.5

Q ss_pred             CCCH----HHHHHHHHHhCCCC--CcEEEEecCh-hhHHHHHHcCCeEEEEcCC
Q 022348          238 KPDP----SIYVTAAKRLGISE--KDCLVVEDSV-IGLQAATRAGMACVITYTS  284 (298)
Q Consensus       238 KP~~----~~~~~~~~~lgi~~--~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~  284 (298)
                      ||+|    +.|..-++.+|++|  .++-||.|+. +--.+|.-.||. ||++|-
T Consensus        81 KPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWE-VWldGM  133 (279)
T cd00733          81 KPSPDNIQELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWE-VWLDGM  133 (279)
T ss_pred             CCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccE-EEECCe
Confidence            6666    57778899999997  5899999999 688999999999 577765

GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=88.05  E-value=1.3  Score=36.05  Aligned_cols=41  Identities=12%  Similarity=0.085  Sum_probs=36.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+.|+..+.|++|++.|++++++|+.....+...++.+ ++.
T Consensus        18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l-~~~   58 (215)
T TIGR01487        18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLI-GTS   58 (215)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHh-CCC
Confidence            47778999999999999999999999999888888877 765

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>CHL00162 thiG thiamin biosynthesis protein G; Validated

Probab=87.75  E-value=10  Score=31.58  Aligned_cols=98  Identities=14%  Similarity=0.106  Sum_probs=68.7

Q ss_pred             CCCCChhHHHHHH---HHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC--CCCCCHHHHHHHHHHh
Q 022348          177 TVEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK--QKKPDPSIYVTAAKRL  251 (298)
Q Consensus       177 ~~~~~pg~~~~l~---~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~--~~KP~~~~~~~~~~~l  251 (298)
                      ...++|+..++++   .|-+.|+.+.-+++.+....+ .|+.. |-.-     ...-+..++  .+-.+|..++.+.++.
T Consensus       116 ~~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~-rLed~-Gc~a-----VMPlgsPIGSg~Gl~n~~~l~~i~e~~  188 (267)
T CHL00162        116 PKYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAK-HLEDI-GCAT-----VMPLGSPIGSGQGLQNLLNLQIIIENA  188 (267)
T ss_pred             CcccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHH-HHHHc-CCeE-----EeeccCcccCCCCCCCHHHHHHHHHcC
Confidence            3458888888875   577899999999999987554 44444 3321     112222333  4556788999999887


Q ss_pred             CCCCCcEEEEecCh---hhHHHHHHcCCeEEEEcCCC
Q 022348          252 GISEKDCLVVEDSV---IGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       252 gi~~~~~~~vgD~~---~Di~~a~~aG~~~v~~~~~~  285 (298)
                      .++    +.+|=+.   .|+..|-+.|...|++++..
T Consensus       189 ~vp----VivdAGIgt~sDa~~AmElGaDgVL~nSaI  221 (267)
T CHL00162        189 KIP----VIIDAGIGTPSEASQAMELGASGVLLNTAV  221 (267)
T ss_pred             CCc----EEEeCCcCCHHHHHHHHHcCCCEEeeccee
Confidence            653    6777554   79999999999999877643

>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit

Probab=87.53  E-value=0.85  Score=37.72  Aligned_cols=46  Identities=30%  Similarity=0.369  Sum_probs=38.4

Q ss_pred             CCCH----HHHHHHHHHhCCCC--CcEEEEecCh-hhHHHHHHcCCeEEEEcCC
Q 022348          238 KPDP----SIYVTAAKRLGISE--KDCLVVEDSV-IGLQAATRAGMACVITYTS  284 (298)
Q Consensus       238 KP~~----~~~~~~~~~lgi~~--~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~  284 (298)
                      ||+|    +.|..-++.+|++|  .++-||.|+. +--.+|.-.||. ||++|-
T Consensus        82 KPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWE-VWldGM  134 (293)
T TIGR00388        82 KPSPDNIQELYLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWE-VWLDGM  134 (293)
T ss_pred             CCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccE-EEECCe
Confidence            6666    56777789999997  5899999999 688999999999 577764

This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.

>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated

Probab=87.46  E-value=0.83  Score=37.58  Aligned_cols=46  Identities=30%  Similarity=0.357  Sum_probs=38.3

Q ss_pred             CCCH----HHHHHHHHHhCCCC--CcEEEEecCh-hhHHHHHHcCCeEEEEcCC
Q 022348          238 KPDP----SIYVTAAKRLGISE--KDCLVVEDSV-IGLQAATRAGMACVITYTS  284 (298)
Q Consensus       238 KP~~----~~~~~~~~~lgi~~--~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~  284 (298)
                      ||+|    +.|..-++.+||+|  .++-||.|+. +--.+|.-.||. ||++|-
T Consensus        85 KPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWE-VWldGM  137 (283)
T PRK09348         85 KPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWE-VWLDGM  137 (283)
T ss_pred             cCCCccHHHHHHHHHHHhCCCccccceeEeecCCCCCcccccccceE-EEECCe
Confidence            6666    56777889999997  5899999999 688999999999 577764

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=86.84  E-value=1.5  Score=35.69  Aligned_cols=40  Identities=20%  Similarity=0.304  Sum_probs=34.8

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      ..+...+.|+.|+++|++++++||+....+...++.+ ++.
T Consensus        17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l-~~~   56 (221)
T TIGR02463        17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKAL-GLT   56 (221)
T ss_pred             CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCC
Confidence            3344789999999999999999999999999999888 765

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=86.70  E-value=0.69  Score=36.71  Aligned_cols=28  Identities=14%  Similarity=0.267  Sum_probs=19.7

Q ss_pred             cEEEEecCCccccchhHHHHHHHHHHhh
Q 022348           68 QALIFDCDGVIIESEHLHRQAYNDAFSH   95 (298)
Q Consensus        68 k~viFD~DGTL~d~~~~~~~~~~~~~~~   95 (298)
                      -+++||+||||..........+.+.+++
T Consensus        12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~   39 (252)
T KOG3189|consen   12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK   39 (252)
T ss_pred             eEEEEecCCccccccccCCHHHHHHHHH
Confidence            4899999999998765444445555544

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=86.52  E-value=1.8  Score=35.62  Aligned_cols=40  Identities=23%  Similarity=0.259  Sum_probs=35.3

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      ..++..+.|++|+++|+++.++|+.....+...++++ ++.
T Consensus        16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~l-g~~   55 (225)
T TIGR02461        16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREEL-GVE   55 (225)
T ss_pred             CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCC
Confidence            4567899999999999999999999988888888888 764

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=86.40  E-value=1.6  Score=36.46  Aligned_cols=41  Identities=20%  Similarity=0.323  Sum_probs=36.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+.+...+.|++|+++|++++++|+.....+...++.+ ++.
T Consensus        16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~-~~~   56 (256)
T TIGR00099        16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKEL-GLD   56 (256)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCC
Confidence            46678899999999999999999999998888888887 665

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=86.32  E-value=1.8  Score=35.46  Aligned_cols=42  Identities=10%  Similarity=0.071  Sum_probs=36.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                      .+.|...+.|.+|+++|++++++|+.....+...++.+ ++..
T Consensus        20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~   61 (230)
T PRK01158         20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLI-GTSG   61 (230)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh-CCCC
Confidence            36678889999999999999999999998888888777 7653

>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism

Probab=85.28  E-value=20  Score=29.75  Aligned_cols=101  Identities=16%  Similarity=0.129  Sum_probs=64.0

Q ss_pred             CCCCChhHHHHHHHHHHC---CCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCC
Q 022348          177 TVEPRPGVLRLMDEAKAA---GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGI  253 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~---g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi  253 (298)
                      ...++|+..++++..+..   |+.+.-+.+.+....+. ++.+ |-.-.-..-.-+++.   .+..+|+.++.+.+..++
T Consensus       102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~-l~~~-G~~~vmPlg~pIGsg---~Gi~~~~~I~~I~e~~~v  176 (248)
T cd04728         102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKR-LEDA-GCAAVMPLGSPIGSG---QGLLNPYNLRIIIERADV  176 (248)
T ss_pred             ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH-HHHc-CCCEeCCCCcCCCCC---CCCCCHHHHHHHHHhCCC
Confidence            346889999999877666   99999566666665544 4343 332210001112222   334458888888776543


Q ss_pred             CCCcEEEEecC---hhhHHHHHHcCCeEEEEcCCCc
Q 022348          254 SEKDCLVVEDS---VIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       254 ~~~~~~~vgD~---~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                          .+++|=+   +.|+..+...|...|++++...
T Consensus       177 ----pVI~egGI~tpeda~~AmelGAdgVlV~SAIt  208 (248)
T cd04728         177 ----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIA  208 (248)
T ss_pred             ----cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhc
Confidence                3666643   4799999999999998876544

ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=85.12  E-value=2  Score=36.32  Aligned_cols=42  Identities=7%  Similarity=0.076  Sum_probs=36.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                      .+.+...+.|++|+++|++++++|+.....+...++.+ ++..
T Consensus        19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~   60 (272)
T PRK15126         19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGAL-SLDA   60 (272)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCCC
Confidence            46778899999999999999999999999888888887 7653

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=85.00  E-value=2.7  Score=35.96  Aligned_cols=42  Identities=10%  Similarity=0.090  Sum_probs=37.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                      ..++.+.+.|.+|+++|++++++|+.....+....+.+ ++..
T Consensus        18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~L-gl~~   59 (302)
T PRK12702         18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQL-RLEH   59 (302)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh-CCCC
Confidence            35667899999999999999999999999999999888 7763

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=84.61  E-value=1.4  Score=43.44  Aligned_cols=37  Identities=14%  Similarity=0.069  Sum_probs=26.4

Q ss_pred             CCChhHHHHHHHHHHC-CCeEEEEeCCChhhHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLEN  215 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~-g~~i~i~S~~~~~~~~~~l~~  215 (298)
                      .+.|++.++|+.|.+. +..++|+|+.+...++..+..
T Consensus       532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~  569 (797)
T PLN03063        532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE  569 (797)
T ss_pred             CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence            4566777778777765 567888888877777766643

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=84.56  E-value=2.4  Score=34.53  Aligned_cols=40  Identities=13%  Similarity=0.148  Sum_probs=34.5

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      +.+...+.|++|+++|++++++|+.....+...++.+ ++.
T Consensus        16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l-~~~   55 (225)
T TIGR01482        16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLI-GTP   55 (225)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh-CCC
Confidence            5677888999999999999999999998888888877 643

catalyze the same reaction as SPP.

>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional

Probab=84.32  E-value=22  Score=30.84  Aligned_cols=97  Identities=14%  Similarity=0.168  Sum_probs=66.2

Q ss_pred             CCCCChhHHHHHHHHHHC---CCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEe-CCCCC--CCCCCHHHHHHHHHH
Q 022348          177 TVEPRPGVLRLMDEAKAA---GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA-GDDVK--QKKPDPSIYVTAAKR  250 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~---g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~-~~~~~--~~KP~~~~~~~~~~~  250 (298)
                      ...++|+..++++..+..   |+.+.++.+.+....+.. ..+ |-.      .+.- +..+|  .+-.+|+.++.+.+.
T Consensus       176 ~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l-~~~-g~~------avmPl~~pIGsg~gv~~p~~i~~~~e~  247 (326)
T PRK11840        176 AKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRL-EDA-GAV------AVMPLGAPIGSGLGIQNPYTIRLIVEG  247 (326)
T ss_pred             CCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-Hhc-CCE------EEeeccccccCCCCCCCHHHHHHHHHc
Confidence            345888898888877766   999977777777755544 333 221      1111 22222  333488999999988


Q ss_pred             hCCCCCcEEEEecCh---hhHHHHHHcCCeEEEEcCCC
Q 022348          251 LGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       251 lgi~~~~~~~vgD~~---~Di~~a~~aG~~~v~~~~~~  285 (298)
                      ..+    -+.+|=+.   .|+..|-..|...|++++..
T Consensus       248 ~~v----pVivdAGIg~~sda~~AmelGadgVL~nSaI  281 (326)
T PRK11840        248 ATV----PVLVDAGVGTASDAAVAMELGCDGVLMNTAI  281 (326)
T ss_pred             CCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEccee
Confidence            554    37777665   69999999999999877654

>PRK10976 putative hydrolase; Provisional

Probab=84.21  E-value=2.3  Score=35.79  Aligned_cols=41  Identities=15%  Similarity=0.114  Sum_probs=35.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+.+...+.|++++++|++++++|+.....+...++.+ ++.
T Consensus        19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~   59 (266)
T PRK10976         19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNL-EIK   59 (266)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc-CCC
Confidence            36677899999999999999999999998888888887 665

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=83.92  E-value=2.4  Score=35.64  Aligned_cols=41  Identities=20%  Similarity=0.318  Sum_probs=36.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+.|...+.|.+++++|++++++|+.....+...++.+ ++.
T Consensus        20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l-~~~   60 (272)
T PRK10530         20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQAL-ALD   60 (272)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc-CCC
Confidence            46778899999999999999999999998888888887 665

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=83.68  E-value=2.6  Score=42.03  Aligned_cols=38  Identities=11%  Similarity=0.107  Sum_probs=31.2

Q ss_pred             CCChhHHHHHHHHHHC-CCeEEEEeCCChhhHHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENL  216 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~-g~~i~i~S~~~~~~~~~~l~~~  216 (298)
                      .+.|++.++|+.|.+. +..++|+|+.+...++..+...
T Consensus       622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~  660 (934)
T PLN03064        622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF  660 (934)
T ss_pred             CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence            5778899999998875 6789999999998888777543

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]

Probab=83.49  E-value=3.6  Score=40.00  Aligned_cols=109  Identities=16%  Similarity=0.182  Sum_probs=69.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccc---------------------cCcc-eEEeCCCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF---------------------EGLD-CFLAGDDVKQ  236 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~---------------------~~fd-~v~~~~~~~~  236 (298)
                      ++...+.+.+...|..|+++..+|+..+.....+.... |+-.-                     .+-+ +|+.+.+.. 
T Consensus       590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~v-gIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~-  667 (1019)
T KOG0203|consen  590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSV-GIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP-  667 (1019)
T ss_pred             CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhhe-eeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-
Confidence            47778899999999999999999998777777666665 42210                     0001 223333322 


Q ss_pred             CCCCHHHHHHHHHHhC------CCCC--------------cEEEEecChhhHHHHHHcCCeEEE-EcCCCchhHh
Q 022348          237 KKPDPSIYVTAAKRLG------ISEK--------------DCLVVEDSVIGLQAATRAGMACVI-TYTSSTAEQV  290 (298)
Q Consensus       237 ~KP~~~~~~~~~~~lg------i~~~--------------~~~~vgD~~~Di~~a~~aG~~~v~-~~~~~~~~~~  290 (298)
                       .-+++-++.+++...      .+|+              -+-+.||+.||-.+.++|.++.++ +.|..-.+|-
T Consensus       668 -~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqA  741 (1019)
T KOG0203|consen  668 -DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA  741 (1019)
T ss_pred             -ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhh
Confidence             122344555554422      1222              256779999999999999999886 5555545443

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=83.31  E-value=2.6  Score=35.43  Aligned_cols=41  Identities=22%  Similarity=0.374  Sum_probs=37.3

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                      +.+.+.+.|++++++|++++++|++....+...++.+ ++..
T Consensus        21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l-~~~~   61 (264)
T COG0561          21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEEL-GLDG   61 (264)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc-CCCc
Confidence            6778899999999999999999999999999999998 8774

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=82.89  E-value=3  Score=35.30  Aligned_cols=40  Identities=18%  Similarity=0.297  Sum_probs=35.4

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      +.+...+.|++|+++|++++++|+.....+...++.+ ++.
T Consensus        25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l-~~~   64 (271)
T PRK03669         25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL-GLQ   64 (271)
T ss_pred             CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh-CCC
Confidence            4566788999999999999999999999999999998 774

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=82.73  E-value=3  Score=34.87  Aligned_cols=39  Identities=21%  Similarity=0.329  Sum_probs=34.1

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       181 ~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+...+.++.|+++|++++++|+.....+...++.+ ++.
T Consensus        18 ~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~-~~~   56 (256)
T TIGR01486        18 WGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKEL-GLE   56 (256)
T ss_pred             chHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCC
Confidence            345789999999999999999999999899999887 764

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=82.66  E-value=2.4  Score=36.18  Aligned_cols=39  Identities=26%  Similarity=0.330  Sum_probs=32.1

Q ss_pred             cCCCCCChhHHHHHHHHHHCC-CeEEEEeCCChhhHHHHH
Q 022348          175 SGTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCL  213 (298)
Q Consensus       175 ~~~~~~~pg~~~~l~~L~~~g-~~i~i~S~~~~~~~~~~l  213 (298)
                      .+...++|..-++++.+|+.| ++++++||+....+.+.+
T Consensus        88 ~GEPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L  127 (296)
T COG0731          88 SGEPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEEL  127 (296)
T ss_pred             CCCcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHh
Confidence            345679999999999999999 799999999985444333

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=82.37  E-value=3.3  Score=33.98  Aligned_cols=41  Identities=22%  Similarity=0.421  Sum_probs=37.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+.|...+.|++|+++|++++++|+.....+...+..+ ++.
T Consensus        15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~-~~~   55 (254)
T PF08282_consen   15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKEL-GID   55 (254)
T ss_dssp             SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHT-THC
T ss_pred             eeCHHHHHHHHhhcccceEEEEEccCcccccccccccc-cch
Confidence            47789999999999999999999999999999999877 665

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>COG0752 GlyQ Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]

Probab=80.58  E-value=2.1  Score=35.06  Aligned_cols=47  Identities=30%  Similarity=0.346  Sum_probs=37.6

Q ss_pred             CCCHH----HHHHHHHHhCCCC--CcEEEEecCh-hhHHHHHHcCCeEEEEcCCC
Q 022348          238 KPDPS----IYVTAAKRLGISE--KDCLVVEDSV-IGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       238 KP~~~----~~~~~~~~lgi~~--~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~  285 (298)
                      ||+|+    .|..-++.+|++|  .++=||.|+. +--.+|.-.||. ||++|..
T Consensus        86 KPsP~NiQeLYL~SL~~lGid~~~HDIRFVEDnWE~PTlGawGlGWE-VWldGME  139 (298)
T COG0752          86 KPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWENPTLGAWGLGWE-VWLDGME  139 (298)
T ss_pred             cCCCccHHHHHHHHHHHcCCChhhcceeeeccCCCCCccccccccee-EEEcCee
Confidence            77774    5666789999998  5899999998 577788888988 5877753

>PRK13762 tRNA-modifying enzyme; Provisional

Probab=80.40  E-value=8.6  Score=33.54  Aligned_cols=32  Identities=19%  Similarity=0.255  Sum_probs=27.6

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCChh
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS  207 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~  207 (298)
                      +...++|.+.++++.++++|+.+.+.||+...
T Consensus       139 GEPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~  170 (322)
T PRK13762        139 GEPTLYPYLPELIEEFHKRGFTTFLVTNGTRP  170 (322)
T ss_pred             ccccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence            34457889999999999999999999999754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	298
3e58_A	214	Crystal Structure Of Putative Beta-Phosphoglucomuta		4e-13
4g9b_A	243	Crystal Structure Of Beta-Phosphoglucomutase Homolo		2e-10
3kbb_A	216	Crystal Structure Of Putative Beta-Phosphoglucomuta		7e-10
3nas_A	233	The Crystal Structure Of Beta-Phosphoglucomutase Fr		2e-09
3dv9_A	247	Putative Beta-Phosphoglucomutase From Bacteroides V		2e-09
3quq_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		3e-08
3r9k_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		4e-08
3qyp_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		6e-08
4gib_A	250	2.27 Angstrom Crystal Structure Of Beta-Phosphogluc		8e-08
3qub_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		9e-08
3qu5_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		1e-07
3qut_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		1e-07
3qu4_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		3e-07
3l5k_A	250	The Crystal Structure Of Human Haloacid Dehalogenas		6e-07
3fm9_A	221	Analysis Of The Structural Determinants Underlying		1e-06
1o03_A	221	Structure Of Pentavalent Phosphorous Intermediate O		1e-06
1lvh_A	221	The Structure Of Phosphorylated Beta-phosphoglucomu		2e-06
2hi0_A	240	Crystal Structure Of Putative Phosphoglycolate Phos		1e-05
4ex6_A	237	Crystal Structure Of The Alnumycin P Phosphatase Al		1e-05
2nyv_A	222	X-Ray Crystal Structure Of A Phosphoglycolate Phosp		1e-05
4eek_A	259	Crystal Structure Of Had Family Hydrolase Dr_1622 F		3e-05
2yy6_A	213	Crystal Structure Of The Phosphoglycolate Phosphata		9e-05
2no4_A	240	Crystal Structure Analysis Of A Dehalogenase Length		3e-04
2no5_A	240	Crystal Structure Analysis Of A Dehalogenase With I		3e-04
3s6j_A	233	The Crystal Structure Of A Hydrolase From Pseudomon		4e-04
3d6j_A	225	Crystal Structure Of Putative Haloacid Dehalogenase		5e-04
1te2_A	226	Putative Phosphatase Ynic From Escherichia Coli K12		5e-04

>pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 51/222 (22%)
Query: 63  SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD---PEFYDVLQ 119
           S+  ++A+IFD DGV+ ++E  +          ++ R     Q+ ++ D   P F+    
Sbjct: 1   SNAXVEAIIFDXDGVLFDTEKYY----------YDRRASFLGQKGISIDHLPPSFF---- 46
Query: 120 NQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTER------YQQII 173
               GG  K  W             +N    + D+  +  L +++ T +      Y+++I
Sbjct: 47  ---IGGNTKQVW-------------ENILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELI 90
Query: 174 KSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLAGD 232
                   P VL++++E K+ G ++ + S++ K+ +   LE      R +G  D  L+G+
Sbjct: 91  -------FPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEE----NRLQGFFDIVLSGE 139
Query: 233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 274
           + K+ KP+P IY+TA K+L +     L++EDS  G+ A   A
Sbjct: 140 EFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAA 181

>pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 35/230 (15%)
Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNW---DPEFYDVLQNQIG 123
           LQ +IFD DGVI ++ HLH QA+    +   +  D    +SL     D     +LQ+   
Sbjct: 5   LQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQH--- 61
Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP-RP 182
           GGK                          ++A+L       K   Y   ++  TV    P
Sbjct: 62  GGK-------------------EGDFNSQERAQL----AYRKNLLYVHSLRELTVNAVLP 98
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
           G+  L+ + +A    V + S +  +  IL       +E  E          +K  KPDP 
Sbjct: 99  GIRSLLADLRAQQISVGLASVSLNAPTILA-----ALELREFFTFCADASQLKNSKPDPE 153
Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI 292
           I++ A   LG+  + C+ +ED+  G+ A   +GM  V      T  Q+ +
Sbjct: 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLL 203

>pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
           +A+IFD DGV+ ++E L+ +AY         R   S  +    D      L  +I G   
Sbjct: 2   EAVIFDXDGVLXDTEPLYFEAYR--------RVAESYGKPYTED------LHRRIXGVPE 47
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
           +        G P   I        D        + + K   + +++K       PGV   
Sbjct: 48  R-------EGLP---ILXEALEIKDSLENFKKRVHEEKKRVFSELLKEN-----PGVREA 92
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
           ++  K+   K+A+ ++  +   +  L  L  +E++   D  + GD VK  KPDP IY+  
Sbjct: 93  LEFVKSKRIKLALATSTPQREALERLRRL-DLEKY--FDVXVFGDQVKNGKPDPEIYLLV 149
Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 285
            +RL +  +  +V EDS  G++AA  AG+  +     S
Sbjct: 150 LERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHS 187

>pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 35/218 (16%)
Query: 66  SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
           SL+A+IFD DGVI ++   H  A+       ++  D    +                   
Sbjct: 1   SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDXNE------------------- 41
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR-PGV 184
             +++   +E    S  IF        +  K    +   K   YQ +I   T E   PG+
Sbjct: 42  --RLKGISREESLESILIFGGAETKYTNAEK--QELXHRKNRDYQXLISKLTPEDLLPGI 97
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD---VKQKKPDP 241
            RL+ + K    K+ + S++  +  IL         R   +D F A  D   + + KPDP
Sbjct: 98  GRLLCQLKNENIKIGLASSSRNAPKIL--------RRLAIIDDFHAIVDPTTLAKGKPDP 149
Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            I++TAA  L +S  DC  +ED+  G+ A   AG   V
Sbjct: 150 DIFLTAAAXLDVSPADCAAIEDAEAGISAIKSAGXFAV 187

>pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 39/234 (16%)
Query: 64  SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG 123
           S  L+A++FD DGV+ +S   H ++++                           +  + G
Sbjct: 20  SIDLKAVLFDXDGVLFDSXPNHAESWHK--------------------------IXKRFG 53
Query: 124 GGKPKMRWYFKEHGWPSSTI--FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
            G  +   Y  E    +STI          D   + I  I   KTE + +  K+   E  
Sbjct: 54  FGLSREEAYXHEGRTGASTINIVSRRERGHDATEEEIKAIYQAKTEEFNKCPKA---ERX 110
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL---DCFLAGDDVKQKK 238
           PG L ++ + K+ G    V + + ++S++  L +      F G+   +  +   DVK  K
Sbjct: 111 PGALEVLTKIKSEGLTPXVVTGSGQTSLLDRLNH-----NFPGIFQANLXVTAFDVKYGK 165
Query: 239 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI 292
           P+P  Y+ A K+ G    + LV+E++ +G+QA   AG+  +   T    + V +
Sbjct: 166 PNPEPYLXALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLL 219

>pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 41/240 (17%)
Query: 59  RVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNV---RCDPSSQQSLNWDPEFY 115
           R S   + L+A++FD DGV+  S   H +A++       +   R +    +         
Sbjct: 16  RGSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTIN 75
Query: 116 DVLQNQIG--GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII 173
            V Q ++G    + ++   + E     S +F++ P                         
Sbjct: 76  IVFQRELGKEATQEEIESIYHE----KSILFNSYP------------------------- 106
Query: 174 KSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE-NLIGMERFEGLDCFLAGD 232
                E  PG   L+ + K+ G    V + + + S++  LE N  GM   E     +   
Sbjct: 107 ---EAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKE---LMVTAF 160
Query: 233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI 292
           DVK  KP+P  Y+ A K+ G+   + +V+E++ +G++A  +AG+  +   T     QV +
Sbjct: 161 DVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLL 220

>pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 45/242 (18%)
Query: 59  RVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPE----- 113
           R S   + L+A++FD DGV+  S   H +A++       +  D S +++   D       
Sbjct: 16  RGSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGL--DLSREEAYMHDGRTGAST 73
Query: 114 FYDVLQNQIG--GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQ 171
              V Q ++G    + ++   + E     S +F++ P                       
Sbjct: 74  INIVFQRELGKEATQEEIESIYHE----KSILFNSYP----------------------- 106
Query: 172 IIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE-NLIGMERFEGLDCFLA 230
                  E  PG   L+ + K+ G    V + + + S++  LE N  GM   E     + 
Sbjct: 107 -----EAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKE---LMVT 158
Query: 231 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQV 290
             DVK  KP+P  Y+ A K+ G+   + +V+E++ +G++A  +AG+  +   T     QV
Sbjct: 159 AFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQV 218
Query: 291 RI 292
            +
Sbjct: 219 LL 220

>pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 41/240 (17%)
Query: 59  RVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNV---RCDPSSQQSLNWDPEFY 115
           R S   + L+A++FD DGV+  S   H +A++       +   R +              
Sbjct: 16  RGSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHNGRTGASTIN 75
Query: 116 DVLQNQIG--GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII 173
            V Q ++G    + ++   + E     S +F++ P                         
Sbjct: 76  IVFQRELGKEATQEEIESIYHE----KSILFNSYP------------------------- 106
Query: 174 KSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE-NLIGMERFEGLDCFLAGD 232
                E  PG   L+ + K+ G    V + + + S++  LE N  GM   E     +   
Sbjct: 107 ---EAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKE---LMVTAF 160
Query: 233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI 292
           DVK  KP+P  Y+ A K+ G+   + +V+E++ +G++A  +AG+  +   T     QV +
Sbjct: 161 DVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLL 220

>pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 63  SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI 122
           S+  ++A IFD DGVI ++ + H  A+        +  D    +SL              
Sbjct: 22  SNAMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNESLK------------- 68
Query: 123 GGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV-EPR 181
             G  +M              F N   +  ++ K+   + + K   Y  +I   T  +  
Sbjct: 69  --GISRME------SLDRILEFGNKKYSFSEEEKV--RMAEEKNNYYVSLIDEITSNDIL 118
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
           PG+  L+ + K+   K+ + SA+  +  +L   N +G+   +  D        K  KP P
Sbjct: 119 PGIESLLIDVKSNNIKIGLSSASKNAINVL---NHLGIS--DKFDFIADAGKCKNNKPHP 173
Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            I++ +AK L ++ ++C+ +ED+  G+ A   A M  V
Sbjct: 174 EIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSV 211

>pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 41/240 (17%)
Query: 59  RVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNV---RCDPSSQQSLNWDPEFY 115
           R S   + L+A++FD DGV+  S   H +A++       +   R +              
Sbjct: 16  RGSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHAGRTGASTIN 75
Query: 116 DVLQNQIG--GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII 173
            V Q ++G    + ++   + E     S +F++ P                         
Sbjct: 76  IVFQRELGKEATQEEIESIYHE----KSILFNSYP------------------------- 106
Query: 174 KSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE-NLIGMERFEGLDCFLAGD 232
                E  PG   L+ + K+ G    V + + + S++  LE N  GM   E     +   
Sbjct: 107 ---EAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKE---LMVTAF 160
Query: 233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI 292
           DVK  KP+P  Y+ A K+ G+   + +V+E++ +G++A  +AG+  +   T     QV +
Sbjct: 161 DVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLL 220

>pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 41/240 (17%)
Query: 59  RVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNV---RCDPSSQQSLNWDPEFY 115
           R S   + L+A++F+ DGV+  S   H +A++       +   R +    +         
Sbjct: 16  RGSHMRKKLKAVLFNMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTIN 75
Query: 116 DVLQNQIG--GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII 173
            V Q ++G    + ++   + E     S +F++ P                         
Sbjct: 76  IVFQRELGKEATQEEIESIYHE----KSILFNSYP------------------------- 106
Query: 174 KSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE-NLIGMERFEGLDCFLAGD 232
                E  PG   L+ + K+ G    V + + + S++  LE N  GM   E     +   
Sbjct: 107 ---EAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKE---LMVTAF 160
Query: 233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI 292
           DVK  KP+P  Y+ A K+ G+   + +V+E++ +G++A  +AG+  +   T     QV +
Sbjct: 161 DVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLL 220

>pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 41/240 (17%)
Query: 59  RVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNV---RCDPSSQQSLNWDPEFY 115
           R S   + L+A++FD +GV+  S   H +A++       +   R +    +         
Sbjct: 16  RGSHMRKKLKAVLFDMNGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTIN 75
Query: 116 DVLQNQIG--GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII 173
            V Q ++G    + ++   + E     S +F++ P                         
Sbjct: 76  IVFQRELGKEATQEEIESIYHE----KSILFNSYP------------------------- 106
Query: 174 KSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE-NLIGMERFEGLDCFLAGD 232
                E  PG   L+ + K+ G    V + + + S++  LE N  GM   E     +   
Sbjct: 107 ---EAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKE---LMVTAF 160
Query: 233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI 292
           DVK  KP+P  Y+ A K+ G+   + +V+E++ +G++A  +AG+  +   T     QV +
Sbjct: 161 DVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLL 220

>pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE-NLIGMERFEGLDCFLAGDDVKQK 237
           E  PG   L+ + K+ G    V + + + S++  LE N  GM   E     +   DVK  
Sbjct: 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKE---LMVTAFDVKYG 165
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI 292
           KP+P  Y+ A K+ G+   + +V+E++ +G++A  +AG+  +   T     QV +
Sbjct: 166 KPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLL 220

>pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 107/228 (46%), Gaps = 40/228 (17%)
Query: 60  VSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQ 119
           ++A  Q +  LIFD DG+++++E L+   + +  + ++        +  +WD      ++
Sbjct: 23  MAAPPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYD--------KKYSWD------VK 68
Query: 120 NQIGGGKPKMRWYFKEHGWPSSTIFD--NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGT 177
           + + G         K+    +  I D    P++ ++      L+++ +T + +++  +  
Sbjct: 69  SLVMG---------KKALEAAQIIIDVLQLPMSKEE------LVEESQT-KLKEVFPTAA 112
Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD--VK 235
           +   PG  +L+   +  G   A+ +++  +S    ++     E F      + GDD  V+
Sbjct: 113 L--MPGAEKLIIHLRKHGIPFALATSSRSAS--FDMKTSRHKEFFSLFSHIVLGDDPEVQ 168
Query: 236 QKKPDPSIYVTAAKRLGI--SEKDCLVVEDSVIGLQAATRAGMACVIT 281
             KPDP I++  AKR     + + CLV ED+  G++AA  AGM  V+ 
Sbjct: 169 HGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMV 216

>pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 165 KTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223
           K + Y ++I+     +  PG+L+L+ + ++   K+A+ SA+     +L   NL G     
Sbjct: 76  KNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGY---- 131
Query: 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 275
             D      +V   KP P I++ AA  +G++  + + +EDS  G+QA   +G
Sbjct: 132 -FDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 165 KTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223
           K + Y ++I+     +  PG+L+L+ + ++   K+A+ SA+     +L   NL G     
Sbjct: 76  KNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGY---- 131
Query: 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 275
             D      +V   KP P I++ AA  +G++  + + +EDS  G+QA   +G
Sbjct: 132 -FDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 165 KTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223
           K + Y ++I+     +  PG+L+L+ + ++   K+A+ SA+     +L   NL G     
Sbjct: 76  KNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGY---- 131
Query: 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 275
             D      +V   KP P I++ AA  +G++  + + +EDS  G+QA   +G
Sbjct: 132 -FDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|2HI0|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase (Yp_619066.1) From Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc Baa-365 At 1.51 A Resolution Length = 240

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 24/211 (11%)
Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDV-----LQNQI 122
           +A IFD DG I+++      A N AF     R D + +   N+      V     L  + 
Sbjct: 5   KAAIFDXDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEA 64
Query: 123 GGGKPKMRWY-FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
           G  +  +  +  K+   P +       VT  +  +++++ + +  +  Q  IK+G   P 
Sbjct: 65  GSSRESLVAFGTKDEQIPEA-------VTQTEVNRVLEVFKPYYADHCQ--IKTG---PF 112
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG-LDCFLAGDDVKQKKPD 240
           PG+L L    +  G K+AV S     +V + +E L     F G  D  L      ++KP 
Sbjct: 113 PGILDLXKNLRQKGVKLAVVSNKPNEAVQVLVEEL-----FPGSFDFALGEKSGIRRKPA 167
Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 271
           P       K LG+    C+ + DS I +Q A
Sbjct: 168 PDXTSECVKVLGVPRDKCVYIGDSEIDIQTA 198

>pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFL---AGDD-VKQK 237
           PGVL  +D   AAG ++A+ ++  + +     E         GLD  L   AGDD V++ 
Sbjct: 107 PGVLEGLDRLSAAGFRLAMATSKVEKAARAIAE-------LTGLDTRLTVIAGDDSVERG 159
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQV 290
           KP P + +  A+ LGI  + C+V+ D V   +    AGM  + ++Y  S  +++
Sbjct: 160 KPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDEL 213

>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 53/224 (23%)
Query: 66  SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
           SL+ ++FD DG +I+S      A + A +         + + L  +  + D +   IGGG
Sbjct: 2   SLRVILFDLDGTLIDS------AKDIALAL------EKTLKELGLEEYYPDNVTKYIGGG 49
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVE------ 179
                                       +A L  +++D   E Y ++ +   +E      
Sbjct: 50  V---------------------------RALLEKVLKDKFREEYVEVFRKHYLENPVVYT 82
Query: 180 -PRPGVLRLMDEAKAAGKKVAVCSAATK--SSVILCLENLIGMERFEGLDCFLAGDDVKQ 236
            P P +   ++  K+ G K+AV S   +  S  IL + NL G       D  + GD   +
Sbjct: 83  KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY-----FDLIVGGDTFGE 137
Query: 237 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280
           KKP P+  +   + LG   +  L+V D+   ++A  RAG    +
Sbjct: 138 KKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTAL 181

>pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
           A++FD DGV++ESE +  Q +    +   +  D  ++ ++ +  + +D +          
Sbjct: 30  AVLFDLDGVLVESEGIIAQVWQSVLAERGLHLD-LTEIAMYFTGQRFDGV---------- 78
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
           + +  ++H       F  PP          D +   +T     +     +E     LR +
Sbjct: 79  LAYLAQQHD------FVPPP----------DFLDVLETRFNAAMTGVTAIEGAAETLRAL 122
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
              +AAG   A+ S + +  + L L  + G+    G   +       + KP P +Y  AA
Sbjct: 123 ---RAAGVPFAIGSNSERGRLHLKL-RVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAA 178
Query: 249 KRLGISEKDCLVVEDSV 265
           ++LGI  + C+V+EDSV
Sbjct: 179 QQLGILPERCVVIEDSV 195

>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From Aquifex Aeolicus Vf5 Length = 213

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 154 QAKLIDLIQDWKTERYQQIIKSGTVE-------PRPGVLRLMDEAKAAGKKVAVCSAATK 206
           +A L  +++D   E Y ++ +   +E       P P +   ++  K+ G K+AV S   +
Sbjct: 49  RALLEKVLKDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLE 108
Query: 207 --SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS 264
             S  IL + NL G       D  + GD   +KKP P+  +   + LG   +  L+V D+
Sbjct: 109 ELSKKILDILNLSGY-----FDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDT 163
Query: 265 VIGLQAATRAGMACVI 280
              ++A  RAG    +
Sbjct: 164 DADIEAGKRAGTKTAL 179

>pdb|2NO4|A Chain A, Crystal Structure Analysis Of A Dehalogenase Length = 240

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
           P     +++ K+AG  VA+ S      +   L+    ++R   LD  L+ DD+K  KPDP
Sbjct: 108 PDAAETLEKLKSAGYIVAILSNGNDEMLQAALK-ASKLDRV--LDSCLSADDLKIYKPDP 164
Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            IY  A  RLG++  +   V  +   L  A + G   V
Sbjct: 165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTV 202

>pdb|2NO5|A Chain A, Crystal Structure Analysis Of A Dehalogenase With Intermediate Complex Length = 240

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
           P     +++ K+AG  VA+ S      +   L+    ++R   LD  L+ DD+K  KPDP
Sbjct: 108 PDAAETLEKLKSAGYIVAILSNGNDEMLQAALKA-SKLDRV--LDSCLSADDLKIYKPDP 164
Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            IY  A  RLG++  +   V  +   L  A + G   V
Sbjct: 165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTV 202

>pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Syringae Length = 233

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG-GGKP 127
           + IFD DG + +S + +  A+ +A    N+             P     +  +IG  G  
Sbjct: 8   SFIFDLDGTLTDSVYQNVAAWKEALDAENI-------------PLAXWRIHRKIGXSGGL 54
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQ-QIIKSGTVEPRPGVLR 186
            ++   +E G   +          D+QA+ +        ER Q QII        PG + 
Sbjct: 55  XLKSLSRETGXSIT----------DEQAERLSEKHAQAYERLQHQII------ALPGAVE 98
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENL-IGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
           L++       K  + ++    +  + L+ L + + +       +  DDV   KPDP +++
Sbjct: 99  LLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN----IVTRDDVSYGKPDPDLFL 154
Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATR 273
            AAK++G    +CLV+ D++    AA R
Sbjct: 155 AAAKKIGAPIDECLVIGDAIWDXLAARR 182

>pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
           P  L  +   K  G ++ + S   +  ++  L N    + F   D  + G+DV   KPDP
Sbjct: 92  PDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHXPDDWF---DIIIGGEDVTHHKPDP 148
Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVR 291
              + A  RL    ++ L + DS +    A  AG++   +T   +TA++ +
Sbjct: 149 EGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGXTTAQEFQ 199

>pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 91/240 (37%), Gaps = 46/240 (19%)
Query: 62  ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
           ++ + + A IFD DG++I+SE L  +A  D  +   V  D S +       E  D L  +
Sbjct: 4   STPRQILAAIFDXDGLLIDSEPLWDRAELDVXASLGV--DISRRN------ELPDTLGLR 55
Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK------- 174
           I        WY +                           Q W     Q++++       
Sbjct: 56  IDXVVDL--WYAR---------------------------QPWNGPSRQEVVERVIARAI 86
Query: 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN-LIGMERFEGLDCFLAGDD 233
           S   E RP +L  + EA A  K+  +      +S +  LE  L   +  +  D   + + 
Sbjct: 87  SLVEETRP-LLPGVREAVALCKEQGLLVGLASASPLHXLEKVLTXFDLRDSFDALASAEK 145
Query: 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRII 293
           +   KP P +Y+  A +LG+    C+ +EDSV G  A+  A    ++          R +
Sbjct: 146 LPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGXIASKAARXRSIVVPAPEAQNDPRFV 205

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	298
1te2_A	226	Putative phosphatase; structural genomics, phospha	4e-52
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	2e-50
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	8e-50
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	9e-50
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	3e-49
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	4e-49
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	5e-49
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	1e-48
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	1e-48
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	9e-47
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	3e-42
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	4e-42
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	4e-39
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	4e-34
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	6e-28
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	3e-24
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	7e-23
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	2e-22
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	3e-21
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	3e-21
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	4e-21
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	3e-20
2hsz_A	243	Novel predicted phosphatase; structural genomics,	2e-19
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	3e-19
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	2e-18
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	1e-17
2zg6_A	220	Putative uncharacterized protein ST2620, probable	2e-17
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	2e-17
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	4e-17
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	2e-16
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	1e-15
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	1e-15
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	3e-15
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	3e-15
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	1e-14
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	2e-14
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	1e-13
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	3e-13
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	4e-13
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	1e-12
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	9e-12
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	1e-10
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	4e-10
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	5e-10
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	2e-09
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	2e-08
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	2e-08
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	6e-08
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	1e-07
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	1e-07
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	2e-06
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	2e-06
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	3e-06
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	5e-06
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	3e-05
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	8e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score =  169 bits (431), Expect = 4e-52
 Identities = 45/230 (19%), Positives = 86/230 (37%), Gaps = 30/230 (13%)

Query: 62  ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
           ++ + + A IFD DG++I+SE L  +A  D  +   V          +      + L + 
Sbjct: 4   STPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGV----------DISRR--NELPDT 51

Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
           +G     +   +              P     + ++++        R   +++       
Sbjct: 52  LGLRIDMVVDLWYAR----------QPWNGPSRQEVVE----RVIARAISLVEET-RPLL 96

Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
           PGV   +   K  G  V + SA+    +   L      + F   D   + + +   KP P
Sbjct: 97  PGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF---DALASAEKLPYSKPHP 153

Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR 291
            +Y+  A +LG+    C+ +EDSV G+ A+  A M  ++          R
Sbjct: 154 QVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPR 203

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score =  163 bits (415), Expect = 8e-50
 Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 31/217 (14%)

Query: 63  SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI 122
           S+  ++A+IFD DGV+ ++E  +            +          + D          I
Sbjct: 1   SNAMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGI----------SIDHLPPSFF---I 47

Query: 123 GGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
           GG   ++        +              D + L +          Q           P
Sbjct: 48  GGNTKQVWENILRDEYD-----------KWDVSTLQEE----YNTYKQNNPLPYKELIFP 92

Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
            VL++++E K+ G ++ + S++ K+ +   LE       F   D  L+G++ K+ KP+P 
Sbjct: 93  DVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF---DIVLSGEEFKESKPNPE 149

Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           IY+TA K+L +     L++EDS  G+ A   A +   
Sbjct: 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVW 186

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score =  163 bits (415), Expect = 9e-50
 Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 34/216 (15%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
            +A++FD DGVI ++   H +A+        +            D +F + L      G 
Sbjct: 2   FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGV---------DRQFNEQL-----KGV 47

Query: 127 PKMRW--YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGT-VEPRPG 183
            +        +          +  V+ ++  +L       K + Y ++I+  +  +  PG
Sbjct: 48  SREDSLQKILDLA--------DKKVSAEEFKELAK----RKNDNYVKMIQDVSPADVYPG 95

Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
           +L+L+ + ++   K+A+ SA+     +L   NL     F   D      +V   KP P I
Sbjct: 96  ILQLLKDLRSNKIKIALASASKNGPFLLERMNL--TGYF---DAIADPAEVAASKPAPDI 150

Query: 244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           ++ AA  +G++  + + +EDS  G+QA   +G   +
Sbjct: 151 FIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPI 186

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score =  162 bits (413), Expect = 3e-49
 Identities = 52/219 (23%), Positives = 85/219 (38%), Gaps = 33/219 (15%)

Query: 64  SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG 123
              LQ +IFD DGVI ++ HLH QA+    +   +          + D +F + L     
Sbjct: 2   VMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGI----------SIDAQFNESL----- 46

Query: 124 GGKPKMRW--YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEP 180
            G  +        +HG               ++A+L       K   Y   ++       
Sbjct: 47  KGISRDESLRRILQHGGKE------GDFNSQERAQLAY----RKNLLYVHSLRELTVNAV 96

Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD 240
            PG+  L+ + +A    V + S +  +  IL    L   E F           +K  KPD
Sbjct: 97  LPGIRSLLADLRAQQISVGLASVSLNAPTILAALEL--REFF---TFCADASQLKNSKPD 151

Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           P I++ A   LG+  + C+ +ED+  G+ A   +GM  V
Sbjct: 152 PEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSV 190

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score =  162 bits (412), Expect = 4e-49
 Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 33/215 (15%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG-GG 125
           L+A++FD DGV+  S   H +A++                 L+   E   +     G  G
Sbjct: 24  LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHG----------LDLSREEAYMH---EGRTG 70

Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
              +   F+      +T             + I+ I   K+  +    +    E  PG  
Sbjct: 71  ASTINIVFQRELGKEAT------------QEEIESIYHEKSILFNSYPE---AERMPGAW 115

Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCL-ENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
            L+ + K+ G    V + + + S++  L  N  GM      +  +   DVK  KP+P  Y
Sbjct: 116 ELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHK---ELMVTAFDVKYGKPNPEPY 172

Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           + A K+ G+   + +V+E++ +G++A  +AG+  +
Sbjct: 173 LMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTI 207

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score =  162 bits (412), Expect = 5e-49
 Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 37/232 (15%)

Query: 52  SLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD 111
           ++          S  L+A++FD DGV+ +S   H ++++     F               
Sbjct: 8   AINNYLHTHGYESIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGF----------GLS 57

Query: 112 PEFYDVLQNQIGGGKPKMRWY---FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTER 168
            E   +       G+          +      +T                + I+     +
Sbjct: 58  REEAYMH-----EGRTGASTINIVSRRERGHDATE---------------EEIKAIYQAK 97

Query: 169 YQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL-ENLIGMERFEGLDC 227
            ++  K    E  PG L ++ + K+ G    V + + ++S++  L  N  G+ +    + 
Sbjct: 98  TEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNHNFPGIFQA---NL 154

Query: 228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            +   DVK  KP+P  Y+ A K+ G    + LV+E++ +G+QA   AG+  +
Sbjct: 155 MVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTI 206

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score =  160 bits (407), Expect = 1e-48
 Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 33/217 (15%)

Query: 66  SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
           SL+A+IFD DGVI ++   H  A+       ++           +D +  + L      G
Sbjct: 1   SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDI----------PFDRDMNERL-----KG 45

Query: 126 KPKMRW--YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII-KSGTVEPRP 182
             +          G            T+ ++ +L+      K   YQ +I K    +  P
Sbjct: 46  ISREESLESILIFGGA------ETKYTNAEKQELMHR----KNRDYQMLISKLTPEDLLP 95

Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
           G+ RL+ + K    K+ + S++  +  IL     + +         +    + + KPDP 
Sbjct: 96  GIGRLLCQLKNENIKIGLASSSRNAPKIL---RRLAIIDD--FHAIVDPTTLAKGKPDPD 150

Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           I++TAA  L +S  DC  +ED+  G+ A   AGM  V
Sbjct: 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAV 187

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score =  160 bits (408), Expect = 1e-48
 Identities = 41/230 (17%), Positives = 84/230 (36%), Gaps = 31/230 (13%)

Query: 63  SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI 122
           S +   + IFD DG + +S + +  A+ +A    N          +            +I
Sbjct: 2   SLRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAEN----------IPLAMWRI---HRKI 48

Query: 123 GGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
           G     M                   +TD+      + + +   + Y+++     +   P
Sbjct: 49  GMSGGLMLKSLSRET--------GMSITDEQ----AERLSEKHAQAYERLQHQ--IIALP 94

Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
           G + L++       K  + ++    +  + L+ L            +  DDV   KPDP 
Sbjct: 95  GAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK---INIVTRDDVSYGKPDPD 151

Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVR 291
           +++ AAK++G    +CLV+ D++  + AA R     V +        ++ 
Sbjct: 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELE 201

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250

 Score =  156 bits (397), Expect = 9e-47
 Identities = 45/225 (20%), Positives = 92/225 (40%), Gaps = 40/225 (17%)

Query: 61  SASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN 120
           +A  Q +  LIFD DG+++++E L+   + +  + ++            +  +   ++  
Sbjct: 24  AAPPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDK----------KYSWDVKSLVM- 72

Query: 121 QIGGGKPKMRW--YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV 178
               GK  +       +            P++ ++       + +    + +++    T 
Sbjct: 73  ----GKKALEAAQIIIDVL--------QLPMSKEE-------LVEESQTKLKEVFP--TA 111

Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD--VKQ 236
              PG  +L+   +  G   A+ +++  +S  +          F      + GDD  V+ 
Sbjct: 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEF--FSLFSHIVLGDDPEVQH 169

Query: 237 KKPDPSIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRAGMACV 279
            KPDP I++  AKR     + + CLV ED+  G++AA  AGM  V
Sbjct: 170 GKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVV 214

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275

 Score =  145 bits (368), Expect = 3e-42
 Identities = 53/259 (20%), Positives = 93/259 (35%), Gaps = 54/259 (20%)

Query: 43  KSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDP 102
           K+N + +++ LT K L     S  + A +FD DG II S+      + D           
Sbjct: 16  KANIQTIAMPLTTKPL-----SLKINAALFDVDGTIIISQPAIAAFWRDFGKDKP----- 65

Query: 103 SSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD--NPPVTDDDQAKLIDL 160
                         +                  HGW +        P   D++    ++ 
Sbjct: 66  -----YFDAEHVIHIS-----------------HGWRTYDAIAKFAPDFADEE---YVNK 100

Query: 161 IQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIGM 219
           ++    E+Y +          PG ++L +   A   +K AV ++ T+       + L  +
Sbjct: 101 LEGEIPEKYGE-----HSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDIL-KI 154

Query: 220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK-------DCLVVEDSVIGLQAAT 272
           +R    + F+  +DVKQ KP P  Y+     LG             +V ED+  G+ A  
Sbjct: 155 KRP---EYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGK 211

Query: 273 RAGMACVITYTSSTAEQVR 291
            AG   V   T+   + ++
Sbjct: 212 AAGCKIVGIATTFDLDFLK 230

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score =  145 bits (367), Expect = 4e-42
 Identities = 46/219 (21%), Positives = 79/219 (36%), Gaps = 31/219 (14%)

Query: 61  SASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN 120
           S       A++FD DGV++ESE +  Q +    +   +            D    ++   
Sbjct: 22  SMPDAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLH----------LDLT--EIAMY 69

Query: 121 QIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP 180
             G     +  Y  +          +     D     +D+++               V  
Sbjct: 70  FTGQRFDGVLAYLAQQH--------DFVPPPD----FLDVLETRFNAAMTG------VTA 111

Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD 240
             G    +   +AAG   A+ S + +  + L L  + G+    G   +       + KP 
Sbjct: 112 IEGAAETLRALRAAGVPFAIGSNSERGRLHLKLR-VAGLTELAGEHIYDPSWVGGRGKPH 170

Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           P +Y  AA++LGI  + C+V+EDSV G  A   AG    
Sbjct: 171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLW 209

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score =  136 bits (344), Expect = 4e-39
 Identities = 46/218 (21%), Positives = 77/218 (35%), Gaps = 42/218 (19%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
              +IFDCDGV+++SE +  Q  +   +                  E       +  G  
Sbjct: 4   FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGY----------PISVEEM---GERFAGMT 50

Query: 127 PK--MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
            K  +     E   P               A L+D  +     R ++      V+   GV
Sbjct: 51  WKNILLQVESEASIP-------------LSASLLDKSEKLLDMRLER-----DVKIIDGV 92

Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM-ERFEGLDCFLAGDDVKQK--KPDP 241
              +           +CS ++   + + L  + G+   F       +  D+     KP P
Sbjct: 93  KFALSRLTT---PRCICSNSSSHRLDMMLTKV-GLKPYFAPH--IYSAKDLGADRVKPKP 146

Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            I++  A + G+S    +VVEDSV G+  A  AGM  +
Sbjct: 147 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVI 184

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score =  124 bits (312), Expect = 4e-34
 Identities = 42/230 (18%), Positives = 79/230 (34%), Gaps = 20/230 (8%)

Query: 67  LQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
           ++ALI D  G  I+   L    A+ + F    +    +  +      +  + ++  +G  
Sbjct: 14  VEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEK-SEHIRRMLGNS 72

Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
           +    W                   ++D  +L DL    +T    Q       +  PG  
Sbjct: 73  RIANAWLSI----------KGQASNEEDIKRLYDLFAPIQTRIVAQ-----RSQLIPGWK 117

Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
            + D+  A G KV   +      +   L               +   DV + +P P + +
Sbjct: 118 EVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT--PASTVFATDVVRGRPFPDMAL 175

Query: 246 TAAKRLGISEKD-CLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRIID 294
             A  L +   + C+ V+D++ G++   RAGM  V    S     +   D
Sbjct: 176 KVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDRED 225

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score =  107 bits (269), Expect = 6e-28
 Identities = 37/229 (16%), Positives = 74/229 (32%), Gaps = 21/229 (9%)

Query: 63  SSQSLQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
               ++A+IF   G  ++       + + + F    V    +++++              
Sbjct: 2   DRMKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGV--AITAEEARKP----------- 48

Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
           +G  K        E    +S           +    I  + +   E    I+      P 
Sbjct: 49  MGLLKIDHVRALTEMPRIASEWNRVFRQLPTEA--DIQEMYEEFEEILFAILPRYA-SPI 105

Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
            GV  ++   +  G K+   +  T+  + +  +           D  +  DDV   +P P
Sbjct: 106 NGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP--DFLVTPDDVPAGRPYP 163

Query: 242 SIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAE 288
            +    A  LG+      + V D+V  ++    AGM  V +   SS   
Sbjct: 164 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELG 212

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 97.0 bits (242), Expect = 3e-24
 Identities = 31/214 (14%), Positives = 63/214 (29%), Gaps = 40/214 (18%)

Query: 68  QALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
            A+IFD    +I++   + R  +         +           + +   +  + I    
Sbjct: 26  TAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYK-----------NIDLDSIPNSTIPKYL 74

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
             +                       +   L +          ++  KS       G + 
Sbjct: 75  ITL-----------------LGKRWKEATILYE-------NSLEKSQKSDNFMLNDGAIE 110

Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
           L+D  K     +A+ S      +   + +      F   D  +   D    KP P   + 
Sbjct: 111 LLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF---DSIIGSGDTGTIKPSPEPVLA 167

Query: 247 AAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACV 279
           A   + I   K+   + DS+  +Q+A  AG   +
Sbjct: 168 ALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPI 201

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 92.2 bits (230), Expect = 7e-23
 Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 49/229 (21%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
              I+D  G ++++      A+ +  + + +              + +D +   +    P
Sbjct: 7   HDYIWDLGGTLLDNYETSTAAFVETLALYGI-------------TQDHDSVYQALKVSTP 53

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR--PGVL 185
                  E   P+   F                      E+Y++        P    GV 
Sbjct: 54  FA----IETFAPNLENF---------------------LEKYKENEARELEHPILFEGVS 88

Query: 186 RLMDEAKAAGKKVAVCSAATKSSVIL-CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
            L+++    G +  + S   ++  +L  LE       F      +      ++KP+P   
Sbjct: 89  DLLEDISNQGGRHFLVS--HRNDQVLEILEKTSIAAYF---TEVVTSSSGFKRKPNPESM 143

Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI-TYTSSTAEQVRI 292
           +   ++  IS    LV+ D  I ++A   AG+   + T   +  + + I
Sbjct: 144 LYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 190

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 89.4 bits (222), Expect = 2e-22
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 9/120 (7%)

Query: 160 LIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219
           LI D+        +  GT E +     L+  AK  G    + S          +  L   
Sbjct: 5   LIVDYAG------VLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58

Query: 220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
                 D  L   ++  +KP+ + +  AA  + +  +DC++V+DS++ ++ A  AG+  V
Sbjct: 59  GVV---DKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGV 115

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234

 Score = 89.3 bits (222), Expect = 3e-21
 Identities = 31/228 (13%), Positives = 76/228 (33%), Gaps = 31/228 (13%)

Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
            ++FD DG +++ E ++R+   DA                      +D      G    +
Sbjct: 6   LVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS---------TGSHDFSGKMDGAIIYE 56

Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
           +       G               + A   D  ++     +++  +   +    GV  L+
Sbjct: 57  V---LSNVGLE-----------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELL 102

Query: 189 DEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
           D   +     + + +   ++S    L+   G++ +         DD   +   P I +  
Sbjct: 103 DALSSRSDVLLGLLTGNFEASGRHKLKLP-GIDHY--FPFGAFADDALDRNELPHIALER 159

Query: 248 AKRL---GISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVR 291
           A+R+     S    +++ D+   ++ A       + +   + T E++ 
Sbjct: 160 ARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELA 207

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 88.4 bits (220), Expect = 3e-21
 Identities = 35/214 (16%), Positives = 76/214 (35%), Gaps = 37/214 (17%)

Query: 66  SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
           + QAL+FD DG +  S+  +     +  +                        +      
Sbjct: 3   TYQALMFDIDGTLTNSQPAYTTVMREVLAT------------YGKPFSPAQAQKTFPMAA 50

Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
           +  M     E G           +   +        +D     Y Q      +E  PG+ 
Sbjct: 51  EQAMT----ELG-----------IAASEFDHFQAQYEDVMASHYDQ------IELYPGIT 89

Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
            L ++  +   ++ + ++  ++ +   + +   M R       ++ DD  ++KPDP   +
Sbjct: 90  SLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM---AVTISADDTPKRKPDPLPLL 145

Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           TA +++ ++ ++ L + DSV   Q A  A +   
Sbjct: 146 TALEKVNVAPQNALFIGDSVSDEQTAQAANVDFG 179

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 88.4 bits (220), Expect = 4e-21
 Identities = 41/239 (17%), Positives = 81/239 (33%), Gaps = 41/239 (17%)

Query: 62  ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEF-YDVLQN 120
           +++      +FD D  + +S       +                           D+++ 
Sbjct: 1   SNAMKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGY-------------TGITDDMIKR 47

Query: 121 QIGGGKPK-MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVE 179
            IG    +                         D  +L    Q++  +     + + T+ 
Sbjct: 48  TIGKTLEESFSILTGI----------------TDADQLESFRQEYS-KEADIYMNANTI- 89

Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLAGDDVKQK 237
             P  L  +   K  G ++ + S  TK    ++  L N +  + F   D  + G+DV   
Sbjct: 90  LFPDTLPTLTHLKKQGIRIGIIS--TKYRFRILSFLRNHMPDDWF---DIIIGGEDVTHH 144

Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVRIIDP 295
           KPDP   + A  RL    ++ L + DS +    A  AG++   +T   +TA++ +    
Sbjct: 145 KPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPY 203

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196

 Score = 85.4 bits (211), Expect = 3e-20
 Identities = 17/122 (13%), Positives = 33/122 (27%), Gaps = 9/122 (7%)

Query: 159 DLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG 218
            L+                 +  PG    +   +  G   A      ++        +  
Sbjct: 16  CLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPVN- 74

Query: 219 MERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMA 277
                  D  +A        P P     A   L +S  + C+++      LQ+   AG+ 
Sbjct: 75  -------DWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLW 127

Query: 278 CV 279
            +
Sbjct: 128 TI 129

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 47/259 (18%), Positives = 83/259 (32%), Gaps = 56/259 (21%)

Query: 27  SSLTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIES-EHLH 85
           S   H+   H   L F+   +                    + + FD DG ++ S   L 
Sbjct: 3   SDKIHH-HHHHENLYFQGMTQF-------------------KLIGFDLDGTLVNSLPDLA 42

Query: 86  RQAYNDAFSHFNVRCDPSSQQSLNWDPEF-YDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144
             + N A    N+             P+   +++   IG G   +     +     +   
Sbjct: 43  L-SINSALKDVNL-------------PQASENLVMTWIGNGADVL----SQRAVDWACKQ 84

Query: 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCS-- 202
               +T+D+          +    Y + + + +    P V   ++  KA G  +AV +  
Sbjct: 85  AEKELTEDEFKYFKRQFGFY----YGENLCNISR-LYPNVKETLEALKAQGYILAVVTNK 139

Query: 203 --AATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLV 260
                +      L        F      L G  + + KP P+ +     + G+  K  L 
Sbjct: 140 PTKHVQ----PILTAFGIDHLF---SEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF 192

Query: 261 VEDSVIGLQAATRAGMACV 279
           V DS   + AA  AG A V
Sbjct: 193 VGDSQNDIFAAHSAGCAVV 211

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 83.5 bits (207), Expect = 3e-19
 Identities = 52/225 (23%), Positives = 83/225 (36%), Gaps = 36/225 (16%)

Query: 68  QALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEF-YDVLQNQIGGG 125
           +A IFD DG I+++   L   A N AF     R             +F  + ++N  G G
Sbjct: 5   KAAIFDMDGTILDTSADLTS-ALNYAFEQTGHR------------HDFTVEDIKNFFGSG 51

Query: 126 KPKM-------RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV 178
                                +    D        Q ++  +++ +K   Y    +  T 
Sbjct: 52  VVVAVTRALAYEAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFK-PYYADHCQIKTG 110

Query: 179 EPRPGVLRLMDEAKAAGKKVAVCS----AATKSSVILCLENLIGMERFEGLDCFLAGDDV 234
            P PG+L LM   +  G K+AV S     A +    + +E L     F   D  L     
Sbjct: 111 -PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQ----VLVEELFP-GSF---DFALGEKSG 161

Query: 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            ++KP P +     K LG+    C+ + DS I +Q A  + M  +
Sbjct: 162 IRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEI 206

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 80.7 bits (200), Expect = 2e-18
 Identities = 27/212 (12%), Positives = 70/212 (33%), Gaps = 35/212 (16%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
            A I+D DG +++S         + F+ F+          + +D E   V +        
Sbjct: 5   TAFIWDLDGTLLDSYEAILSGIEETFAQFS----------IPYDKE--KVREFIFKYSVQ 52

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
            +                      +D+   ++++   +  +      +  V   PG   +
Sbjct: 53  DL---LVRVA--------------EDRNLDVEVLNQVR-AQSLAEKNAQVV-LMPGAREV 93

Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
           +  A  +G +  + +    ++  + L++L     F      L       +KP P      
Sbjct: 94  LAWADESGIQQFIYTHKGNNAFTI-LKDLGVESYF---TEILTSQSGFVRKPSPEAATYL 149

Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
             +  ++  +   + D  + ++ A  +G+  +
Sbjct: 150 LDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI 181

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 79.1 bits (196), Expect = 1e-17
 Identities = 27/212 (12%), Positives = 65/212 (30%), Gaps = 33/212 (15%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
             ++FD DG + +S     ++   + + F+++ +                L   +G    
Sbjct: 5   NYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVED------------LSSLNKFVGPPLK 52

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
                F E+              ++     ID  +    + ++        +   G+  L
Sbjct: 53  TS---FMEY----------YNFDEETATVAIDYYR----DYFKAKGMFEN-KVYDGIEAL 94

Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
           +   K  G  + V ++         LE+      F   D  +      +      +   A
Sbjct: 95  LSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF---DAIVGSSLDGKLSTKEDVIRYA 151

Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            + L I   D +++ D    +  A +  +  +
Sbjct: 152 MESLNIKSDDAIMIGDREYDVIGALKNNLPSI 183

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 78.2 bits (193), Expect = 2e-17
 Identities = 34/213 (15%), Positives = 70/213 (32%), Gaps = 28/213 (13%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
           +A++ D    ++  + +  +             D           + +      +     
Sbjct: 4   KAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLR---------KVFRAYAKAM----- 49

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
            M  Y  E G       ++    D      I   +    E  +  I+ G        L  
Sbjct: 50  GMINYPDEDGL------EHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEF 103

Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
           ++  K+ G K+A+ S A+   V   LE    ++++   D      ++K  KP+P I+  A
Sbjct: 104 LEGLKSNGYKLALVSNAS-PRVKTLLEKF-DLKKY--FDALALSYEIKAVKPNPKIFGFA 159

Query: 248 AKRLGISEKDCLVVEDSVIG-LQAATRAGMACV 279
             ++G      + V D        A R+ +  +
Sbjct: 160 LAKVGY---PAVHVGDIYELDYIGAKRSYVDPI 189

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 46/217 (21%), Positives = 80/217 (36%), Gaps = 41/217 (18%)

Query: 66  SLQALIFDCDGVIIES-EHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
           SL+ ++FD DG +I+S + +   A                      +  + D +   IGG
Sbjct: 2   SLRVILFDLDGTLIDSAKDIAL-ALEKTLKELG------------LEEYYPDNVTKYIGG 48

Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
           G   +     E               D  + + +++ +      Y +     T  P P +
Sbjct: 49  GVRAL----LEKVLK-----------DKFREEYVEVFRKH----YLENPVVYTK-PYPEI 88

Query: 185 LRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
              ++  K+ G K+AV S   K        L+ L     F   D  + GD   +KKP P+
Sbjct: 89  PYTLEALKSKGFKLAVVS--NKLEELSKKILDILNLSGYF---DLIVGGDTFGEKKPSPT 143

Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
             +   + LG   +  L+V D+   ++A  RAG    
Sbjct: 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTA 180

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 76.9 bits (190), Expect = 4e-17
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 3/113 (2%)

Query: 167 ERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226
             +++ +  G+  P PG + L+ E    G ++ + +   +    + LE +   + F   D
Sbjct: 59  LEHERDLAQGSR-PAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD 117

Query: 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
               G D    KP P   +  A+   +S    ++V D    L     AG   V
Sbjct: 118 V--LGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTV 168

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 27/232 (11%), Positives = 69/232 (29%), Gaps = 35/232 (15%)

Query: 49  LSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSL 108
           + L       + +A  ++ + ++FD DG + + +    ++   + + F +          
Sbjct: 11  VDLGTENLYFQSNAMKKNYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGI---------- 60

Query: 109 NWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTER 168
               E  + L   IG         FKE+              D    + ++  +    E 
Sbjct: 61  ---KEDLENLDQFIGPPLHDT---FKEYY----------KFEDKKAKEAVEKYR----EY 100

Query: 169 YQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228
           +         +    +  +++     GK + V ++         L        F      
Sbjct: 101 FADKGIFEN-KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF---KYI 156

Query: 229 LAGDDVKQKKPDPSIYVTAAKRLGISEKD-CLVVEDSVIGLQAATRAGMACV 279
              +    +     +         + +KD  ++V D    +  A + G+  +
Sbjct: 157 AGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSI 208

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 72.8 bits (179), Expect = 1e-15
 Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 34/211 (16%)

Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
           AL +D  GV++ +    R+   D    F +  D  +++     PE           G+  
Sbjct: 6   ALFWDIGGVLLTN-GWDREQRADVAQRFGLDTDDFTERHRLAAPELEL--------GRMT 56

Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
           +  Y ++       +    P     +    D                   +PRP VL L 
Sbjct: 57  LAEYLEQ-------VVFYQPRDFTPE----DFRAVM----------EEQSQPRPEVLALA 95

Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
            +      ++   +   +      +      E       F     +   KP+P++Y    
Sbjct: 96  RDLGQ-RYRMYSLNNEGRDLNEYRIRTFGLGEFLLA---FFTSSALGVMKPNPAMYRLGL 151

Query: 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
               +  ++ ++V+D +  +QAA   GM  V
Sbjct: 152 TLAQVRPEEAVMVDDRLQNVQAARAVGMHAV 182

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 73.3 bits (180), Expect = 1e-15
 Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 24/219 (10%)

Query: 65  QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
           + ++ + FD    +++   +  +  +       +     +             ++N+I  
Sbjct: 2   REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVA--------NAVIEVRNEI-- 51

Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
                +    +       +       +    KL   ++  K    + I+         G 
Sbjct: 52  -----KKMRAQASEDPRKVLTG--SQEALAGKLKVDVELVKRATARAILNVDESLVLEGT 104

Query: 185 LRLMDEAKAAGKKVAVCS---AATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
              +   K  G K AV         S   L LE   G+  F  +D     D+V   KP  
Sbjct: 105 KEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERF-GLMEF--IDKTFFADEVLSYKPRK 161

Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACV 279
            ++        +  ++ L + D+     Q A + GM  V
Sbjct: 162 EMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAV 200

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261

 Score = 73.3 bits (179), Expect = 3e-15
 Identities = 32/235 (13%), Positives = 68/235 (28%), Gaps = 22/235 (9%)

Query: 60  VSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVR-----CDPSSQQSLNWDPEF 114
           V +    +  ++ D +G       +    +     +          +   QQ ++   + 
Sbjct: 3   VLSVPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQ 62

Query: 115 YDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD-----NPPVTDDDQAKLIDLIQD--WKTE 167
            +     + G  P               I          ++ D +   +  +Q   W+  
Sbjct: 63  AEE-DAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWR-A 120

Query: 168 RYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC 227
            +              V+  + + + AG KV + S    S  +   + L G      +  
Sbjct: 121 AFTAGRMKAEF--FADVVPAVRKWREAGMKVYIYS----SGSVEAQKLLFGHSTEGDILE 174

Query: 228 FLAG--DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280
            + G  D     K +   Y   A  +G S  + L + D      AA  A +   +
Sbjct: 175 LVDGHFDTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAV 229

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 72.2 bits (178), Expect = 3e-15
 Identities = 29/215 (13%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 65  QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
            S+ A+ FD DG +++S      A+   F    V   P ++    +           +G 
Sbjct: 2   TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVP-SPDAKTIRGF-----------MGP 49

Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
                   F               ++ D  ++ + + +      Y+        +  P +
Sbjct: 50  PLESS---FATC------------LSKDQISEAVQIYR----SYYKAKGIYEA-QLFPQI 89

Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
           + L++E  +    + + +    S+     +NL     F   D           K D    
Sbjct: 90  IDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF---DGIYGSSPEAPHKADVIHQ 145

Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
             A +   ++ +  +++ D+   +  A   G+  +
Sbjct: 146 --ALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 72.9 bits (178), Expect = 1e-14
 Identities = 45/285 (15%), Positives = 90/285 (31%), Gaps = 56/285 (19%)

Query: 34  IFHTNALRFKSNKKPLSLSLTRKALRVSASSQ-SLQALIFDCDGVIIESEHLHRQAYNDA 92
           + H     F    +P+ L L   +  ++     + Q  +   D V +   +++      A
Sbjct: 96  LSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFA 155

Query: 93  FSHFNV-RCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
            +  +V      S +   W     +V Q           WY                   
Sbjct: 156 TTELHVSDATLFSLKGALWTLA-QEVYQE----------WYL-----------------G 187

Query: 152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
               + ++      T +   I +   + P   V  L+++ K AG ++ + +    +  ++
Sbjct: 188 SKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVV 247

Query: 212 CLENLIGMERFEGLDCFLAGDDVK-----------QKKPDPSIYVTAAKR---------- 250
             ENL G+  +   D      DV              KP+P  Y+ A             
Sbjct: 248 PFENL-GLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYI 306

Query: 251 ----LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR 291
                 +++ D  +V DS+  L +A + G   + T T    +   
Sbjct: 307 NKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAA 351

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 40/225 (17%), Positives = 67/225 (29%), Gaps = 34/225 (15%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           ++ L +D    ++   H   +AY        +  +PS+ +       F    +       
Sbjct: 1   MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQ-----GFRQAYR-AQSHSF 54

Query: 127 PKMRWYFKEHGWPS--------STIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV 178
           P    Y   HG  S           F    V D     +  + +      Y+      T 
Sbjct: 55  PN---YGLSHGLTSRQWWLDVVLQTFHLAGVQDAQ--AVAPIAEQL----YKDFSHPCTW 105

Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKK 238
           +   G    + E +  G ++AV S      +   L  L G+      D  L  +     K
Sbjct: 106 QVLDGAEDTLRECRTRGLRLAVISNFD-RRLEGILGGL-GLREH--FDFVLTSEAAGWPK 161

Query: 239 PDPSIYVTAAKRLGISEKDCLVVEDS----VIGLQAATRAGMACV 279
           PDP I+  A +   +       V D+      G       GM   
Sbjct: 162 PDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQG---PRAVGMHSF 203

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 36/219 (16%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
           + + FD D  ++++  L   A  +A  +      P   +        Y  L         
Sbjct: 3   KVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFE------TAYSELIE------- 49

Query: 128 KMRWYFKEHGWPSSTIFD------NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
                 KE+G      FD      + P    +   +   +  +   ++  +         
Sbjct: 50  ----LIKEYGSNFPYHFDYLLRRLDLPY---NPKWISAGVIAYHNTKFAYL------REV 96

Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
           PG  +++   K  G ++ + +          +  L  ++ F   +  +  D    KKP P
Sbjct: 97  PGARKVLIRLKELGYELGIITDGNPVKQWEKILRL-ELDDF--FEHVIISDFEGVKKPHP 153

Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACV 279
            I+  A K   +  ++ L+V D +   +  A R GM  V
Sbjct: 154 KIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTV 192

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 66.8 bits (163), Expect = 3e-13
 Identities = 42/244 (17%), Positives = 77/244 (31%), Gaps = 41/244 (16%)

Query: 54  TRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPE 113
           T      S  S+ ++ L+ D  GV+I                             N D E
Sbjct: 15  TENLYFQSMKSKGIKNLLIDLGGVLI-----------------------------NLDRE 45

Query: 114 FYDVLQNQIGGGKPKMRWYFKEHGWPSSTI-FDNPPVTDDDQAKLI--DLIQDWKTERYQ 170
               ++N    G   +   F  H      +  +   +T  +    I   + +    ++  
Sbjct: 46  --RCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSDKQID 103

Query: 171 QIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF-- 228
               S  V+     L L+ + +     V + S           +N      F+  D F  
Sbjct: 104 AAWNSFLVDIPTYKLDLLLKLREKYV-VYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEK 162

Query: 229 -LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287
                ++K  KP+P I+    +  GI  K+   ++DS I  + A   G++   T  +   
Sbjct: 163 TYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGIS-TYTPKA--G 219

Query: 288 EQVR 291
           E   
Sbjct: 220 EDWS 223

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 65.8 bits (161), Expect = 4e-13
 Identities = 31/230 (13%), Positives = 71/230 (30%), Gaps = 60/230 (26%)

Query: 62  ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
           A  ++    IFD   VI+                             + D          
Sbjct: 2   ARKEAKMLYIFDLGNVIV-----------------------------DIDFNRV------ 26

Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDD---------DQAKLIDLIQ-----DWKTE 167
                  +  +      P +++  +  + +                + +          E
Sbjct: 27  -------LGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYE 79

Query: 168 RYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG-MERFEGLD 226
           ++    ++  V  RP V+ +M + +  G +V V S   +       E      +  + + 
Sbjct: 80  QFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHI- 138

Query: 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 276
            +L+ D +  +KP+  IY    +  G S  D +  +D+   ++ A + G+
Sbjct: 139 -YLSQD-LGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGI 186

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score = 66.0 bits (160), Expect = 1e-12
 Identities = 42/214 (19%), Positives = 70/214 (32%), Gaps = 27/214 (12%)

Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
              FD D  + +S          +   F        Q  L   PE   VL          
Sbjct: 59  VFFFDIDNCLYKSSTRIHDLMQQSILRF-------FQTHLKLSPEDAHVLN--------- 102

Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
              Y+KE+G     +             L        +   Q I+K     P   +L  +
Sbjct: 103 -NSYYKEYGLAIRGLVMF-----HKVNALEYNRLVDDSLPLQDILKP--DIPLRNMLLRL 154

Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG-LDCFLAGDDVKQKKPDPSIYVTA 247
            ++    K   + + A K+  I CL  L   + F+G   C  +  D    KP    +  A
Sbjct: 155 RQSGKIDKLW-LFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKA 213

Query: 248 AKRLGIS-EKDCLVVEDSVIGLQAATRAGMACVI 280
            K  G++  ++   ++DS   ++   + GM   I
Sbjct: 214 MKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 247

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 62.1 bits (151), Expect = 9e-12
 Identities = 24/227 (10%), Positives = 61/227 (26%), Gaps = 52/227 (22%)

Query: 63  SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI 122
           S+  ++ ++FD  GV+I                             + + E  + ++   
Sbjct: 1   SNAMIRNIVFDLGGVLI-----------------------------HLNRE--ESIRRFK 29

Query: 123 GGGKPKMRWYFKEHGWPSSTIFDNPPVTDDD-----QAKLIDLIQ-----DWKTERYQQI 172
             G   +                     D +     + +    +      +   ++    
Sbjct: 30  AIGVADIEEMLDP-------YLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYDA 82

Query: 173 IKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF---L 229
           +     E        +D       ++ + S      + L +              F    
Sbjct: 83  LLGFLEEISAEKFDYIDS-LRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVY 141

Query: 230 AGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 276
           A   + + KP+  I++      G+  ++ L ++D    +  A R G 
Sbjct: 142 ASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGF 188

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232

 Score = 59.1 bits (143), Expect = 1e-10
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 3/103 (2%)

Query: 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ 236
            + P   V   + E K  G K+A+ S  +  S+   + +  G+      D  L+ D V+ 
Sbjct: 93  RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA-GLRDG--FDHLLSVDPVQV 149

Query: 237 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            KPD  +Y  A + LG+     L V  +      A   G    
Sbjct: 150 YKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTC 192

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 34/221 (15%), Positives = 79/221 (35%), Gaps = 28/221 (12%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQ---NQIGG 124
           +A+ FD D  +I++    R+   +       +     +  +  D     + +   +    
Sbjct: 19  RAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYST 78

Query: 125 GKPKMRWY-FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
               +R   ++E                D++    +    WK+ R Q +           
Sbjct: 79  CITDVRTSHWEE-------AIQETKGGADNRKLAEECYFLWKSTRLQHM------ILADD 125

Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
           V  ++ E +    ++ + +   + +    +E     + +   D  + G + K++KP PSI
Sbjct: 126 VKAMLTELRK-EVRLLLLTNGDRQTQREKIEAC-ACQSY--FDAIVIGGEQKEEKPAPSI 181

Query: 244 YVTAAKRLGISEKDCLVVEDS----VIGLQAATRAGMACVI 280
           +      LG+   DC++V D+    + G      AG+   +
Sbjct: 182 FYHCCDLLGVQPGDCVMVGDTLETDIQG---GLNAGLKATV 219

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 29/222 (13%), Positives = 68/222 (30%), Gaps = 33/222 (14%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSS-QQSLNW-----DPEFYDVLQNQ 121
           + L FD D  I       R  + + +  ++      S               + +  + +
Sbjct: 6   KNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGK 65

Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
           +   K ++      +            V D+  A+     +D+      +          
Sbjct: 66  VT--KEELNRQRFFY------PLQAVGVEDEALAE--RFSEDFFAIIPTK------SGLM 109

Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
           P    +++        + + S   +      + +  G++R+      +  +D+   KP P
Sbjct: 110 PHAKEVLEYLAP-QYNLYILSNGFRELQSRKMRSA-GVDRY--FKKIILSEDLGVLKPRP 165

Query: 242 SIYVTAAKRLGISEKDCLVVEDS----VIGLQAATRAGMACV 279
            I+  A        ++ L++ DS    + G   A   GM   
Sbjct: 166 EIFHFALSATQSELRESLMIGDSWEADITG---AHGVGMHQA 204

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240

 Score = 56.1 bits (135), Expect = 2e-09
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ 236
            +   P     +++ K+AG  VA+ S      +   L+    ++R   LD  L+ DD+K 
Sbjct: 103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKAS-KLDRV--LDSCLSADDLKI 159

Query: 237 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            KPDP IY  A  RLG++  +   V  +   L  A + G   V
Sbjct: 160 YKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTV 202

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 33/222 (14%), Positives = 69/222 (31%), Gaps = 39/222 (17%)

Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
           A+ FD  G +   E   +                     LN      D           +
Sbjct: 4   AVFFDSLGTLNSVEGAAKSHLKIMEEVLG-------DYPLNPK-TLLD-----------E 44

Query: 129 MRWYFKEHG--WPSSTIFDNPPVTDDDQAKL-----IDLIQDWKTERYQQIIKSGTVEPR 181
                +E    +          + ++   KL         +++  E   ++ +    E  
Sbjct: 45  YEKLTREAFSNYAGKPYRPLRDILEEVMRKLAEKYGFKYPENFW-EISLRMSQR-YGELY 102

Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
           P V+ ++   K     V + + +     +  L+ L G++     D     ++    KP P
Sbjct: 103 PEVVEVLKSLKG-KYHVGMITDSDTEQAMAFLDAL-GIKDL--FDSITTSEEAGFFKPHP 158

Query: 242 SIYVTAAKRLGISEKDCLVVEDS----VIGLQAATRAGMACV 279
            I+  A K+ G+  ++ + V D+      G   +   GM  +
Sbjct: 159 RIFELALKKAGVKGEEAVYVGDNPVKDCGG---SKNLGMTSI 197

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 23/132 (17%)

Query: 159 DLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG 218
                   + Y +++       R      +++ K  G K A+ S    S   +    L  
Sbjct: 20  TRYDHHPLDTYPEVV------LRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVL-- 71

Query: 219 MERFEGLDCF-------LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS----VIG 267
              F  +D F             K +KPD +I+      L I + + ++V ++    +IG
Sbjct: 72  -TNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIG 130

Query: 268 LQAATRAGMACV 279
              A RAG+  +
Sbjct: 131 ---ANRAGIHAI 139

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253

 Score = 51.8 bits (124), Expect = 6e-08
 Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 149 VTDDDQAKLIDLIQDWKTERYQQIIKSG--TVEPRPGVLRLMDEAKAAGKKVAVCSAATK 206
           VT +  A  +  +     E +   +      + P P   + + E      K A+ S    
Sbjct: 61  VTREALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAP 118

Query: 207 SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266
             +   + N  G+      D  ++ D  +  KP P  Y    + LG++  + L V  +  
Sbjct: 119 DMLQALVANA-GLTDS--FDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGF 175

Query: 267 GLQAATRAGMACV 279
            +  A   G +  
Sbjct: 176 DVGGAKNFGFSVA 188

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240

 Score = 51.0 bits (122), Expect = 1e-07
 Identities = 39/227 (17%), Positives = 65/227 (28%), Gaps = 51/227 (22%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPS---------SQQSLNWDPE--FYD 116
           +AL FDC G +I+ E     A                                P   + D
Sbjct: 7   KALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQD 66

Query: 117 VLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSG 176
           +L+              KE G               ++ +    +++W            
Sbjct: 67  ILRA-------VYDRIAKEWGLE---------PDAAEREEFGTSVKNWP----------- 99

Query: 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ 236
                P  +  +   K    K+ + S   ++   L    L     F   D  +   DV  
Sbjct: 100 ---AFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKL--GVEF---DHIITAQDVGS 150

Query: 237 KKPDPSIYVTAAKRL---GISEKDCLVVEDSVIG-LQAATRAGMACV 279
            KP+P+ +      L   GI +KD L   +S+      A  AG+   
Sbjct: 151 YKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSA 197

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231

 Score = 50.6 bits (120), Expect = 1e-07
 Identities = 31/218 (14%), Positives = 58/218 (26%), Gaps = 48/218 (22%)

Query: 70  LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
            +FDCD  +++++H+           F  +             E ++ L+ ++G      
Sbjct: 14  FLFDCDNTLLDNDHVLADLRAHMMREFGAQNSAR-------YWEIFETLRTELGYADYLG 66

Query: 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMD 189
                    P  T          D      +                     PG L  + 
Sbjct: 67  ALQRYRLEQPRDTRLLLMSSFLIDYPFASRVY--------------------PGALNALR 106

Query: 190 EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG-----LDCFLAGDDVKQKKPDPSIY 244
              A G    + S          +      +  EG     +   L  D V +  P     
Sbjct: 107 HLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVLIYIHKELMLDQVMECYPA---- 161

Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 282
                      +  ++V+D +  L A  +A  A + T 
Sbjct: 162 -----------RHYVMVDDKLRILAAMKKAWGARLTTV 188

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253

 Score = 47.5 bits (112), Expect = 2e-06
 Identities = 31/256 (12%), Positives = 75/256 (29%), Gaps = 41/256 (16%)

Query: 38  NALRFKSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFN 97
            + +   +   + +       R+     +    + D +G +     +    +    +   
Sbjct: 2   GSDKIHHHHHHMVIGQKVLLARIPKMGDNYSTYLLDIEGTVCPISFVKETLFPYFTNKVP 61

Query: 98  VRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKL 157
                 ++     D    ++L       K +++ +  E             V  D +  +
Sbjct: 62  QLVQQDTR-----DSPVSNILSQFHIDNKEQLQAHILE------------LVAKDVKDPI 104

Query: 158 IDLIQD--WKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215
           +  +Q   W    Y+       V      +  +       K+V + S    S  +   + 
Sbjct: 105 LKQLQGYVWA-HGYESGQIKAPV--YADAIDFI----KRKKRVFIYS----SGSVKAQKL 153

Query: 216 LIGMERFEGLDCFLAGD-----------DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS 264
           L G  +        + D           +   KK +   Y    + +G    + L + D+
Sbjct: 154 LFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIGAKASEVLFLSDN 213

Query: 265 VIGLQAATRAGMACVI 280
            + L AA   G+A  +
Sbjct: 214 PLELDAAAGVGIATGL 229

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 31/218 (14%), Positives = 73/218 (33%), Gaps = 27/218 (12%)

Query: 65  QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
           Q++Q + FD D  + +SE  +R A  D  +  +   D    +      +    ++ +   
Sbjct: 11  QAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQ----QHLLAVERR--- 63

Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVT--DDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
                    K  G+ +  +  +   T  +  +A++         E  +  ++   VE   
Sbjct: 64  -------NLKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHP-VEVIA 115

Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
           GV   +  A AA   V + +          +E     + F  ++           + DP 
Sbjct: 116 GVREAV-AAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV--------SEKDPQ 166

Query: 243 IYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACV 279
            Y        +  +  +++ +S+   ++     G   +
Sbjct: 167 TYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGI 204

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187

 Score = 46.2 bits (109), Expect = 3e-06
 Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK 237
           V   P V  ++   ++ G   A  S  ++       + L   E F+    F+  +     
Sbjct: 67  VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEG--ANQLL---ELFDLFRYFVHREIYPGS 121

Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 281
           K     +    ++ GI     +  +D    +   ++ G+ C+  
Sbjct: 122 KIT--HFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHI 163

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 45.8 bits (109), Expect = 5e-06
 Identities = 32/225 (14%), Positives = 72/225 (32%), Gaps = 44/225 (19%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQ---QSLNWDPEFYDVLQNQIGG 124
           + L+FD D  I++ +     A    F   N+      +   +++N    +    + ++  
Sbjct: 8   RTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTIN-QGLWRAFEEGKMT- 65

Query: 125 GKPKMRWY-----FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVE 179
            + ++         KE+G+            + D A L    + +  E +Q         
Sbjct: 66  -RDEVVNTRFSALLKEYGY------------EADGALLEQKYRRFLEEGHQ--------- 103

Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKP 239
              G   L+   +     + + +     +    L +      F         +D   +KP
Sbjct: 104 LIDGAFDLISNLQQ-QFDLYIVTNGVSHTQYKRLRDSGLFPFF---KDIFVSEDTGFQKP 159

Query: 240 DPSIYVTAAKRLG-ISEKDCLVVEDS----VIGLQAATRAGMACV 279
               +    +R+   S +  L++ DS    + G      AG+   
Sbjct: 160 MKEYFNYVFERIPQFSAEHTLIIGDSLTADIKG---GQLAGLDTC 201

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 14/50 (28%), Positives = 23/50 (46%)

Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287
           KP+P IY      L  S  + + ++D    L+ A   GM  ++   + TA
Sbjct: 160 KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTA 209

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201

 Score = 41.8 bits (98), Expect = 8e-05
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 5/83 (6%)

Query: 197 KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256
           +V   S  + + V   LE    +  F       + + VK+ KP P +Y      +G  E 
Sbjct: 90  EVYALSNGSINEVKQHLERNGLLRYF---KGIFSAESVKEYKPSPKVYKYFLDSIGAKE- 145

Query: 257 DCLVVEDSVIGLQAATRAGMACV 279
              +V  +   +  A  AGM  +
Sbjct: 146 -AFLVSSNAFDVIGAKNAGMRSI 167

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 3e-04
 Identities = 37/300 (12%), Positives = 87/300 (29%), Gaps = 63/300 (21%)

Query: 31  HNPIFHTNALRFKSNKKPLSLSLT--RKALRVSASSQSLQALIF--DCDGVIIESEHLHR 86
           H+  F T   +++  K  LS+                  ++++   + D +I+  + +  
Sbjct: 5   HHMDFETGEHQYQ-YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63

Query: 87  QAYNDAFSHFNVRCDPSSQQ-------SLNWDPEF-YDVLQNQIGGGKPKMRWYFKEHG- 137
                    F        +         L  + +F    ++ +        R Y ++   
Sbjct: 64  -----TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118

Query: 138 -WPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL--MDEAKAA 194
            +  + +F    V+   + +    ++    E          + P   VL +  +     +
Sbjct: 119 LYNDNQVFAKYNVS---RLQPYLKLRQALLE----------LRPAKNVL-IDGV---LGS 161

Query: 195 GKKVAVCSAATKSSVILCLENLI-----G--------MERFEGL----DC-FLAGDDVKQ 236
           GK            V   ++  I              +E  + L    D  + +  D   
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221

Query: 237 KKPDPSIYVTAAKRLGISEKD---CLVVEDSVIGLQAATRAGMAC---VITYTSSTAEQV 290
                   + A  R  +  K    CL+V  +V   +A     ++C   + T      + +
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL 281

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	298
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	100.0
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.98
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.97
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.97
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.97
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.97
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.96
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.96
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.96
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.96
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.96
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.96
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.96
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.96
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.96
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.96
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.96
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.96
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.95
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.95
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.95
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.95
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.95
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.95
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.95
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.95
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.95
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.95
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.95
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.95
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.95
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.95
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.95
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.94
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.94
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.94
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.94
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.94
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.94
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.94
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.94
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.94
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.94
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.94
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.94
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.94
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.93
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.93
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.93
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.93
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.93
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.93
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.93
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.93
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.93
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.92
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.92
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.92
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.91
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.91
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.91
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.91
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.9
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.89
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.89
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.89
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.88
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.88
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.87
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.87
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.87
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.85
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.85
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.85
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.85
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.85
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.85
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.85
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.84
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.84
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.83
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.82
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.82
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.82
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.81
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.8
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.79
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.79
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.78
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.78
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.78
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.78
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.78
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.78
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.77
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.77
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.77
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.77
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.77
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.76
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.76
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.75
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.74
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.72
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.71
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.71
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.71
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.7
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.68
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.68
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.68
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.67
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.67
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.48
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.66
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.65
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.63
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.62
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.6
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.6
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.59
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.57
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.57
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.56
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.51
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.44
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.42
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	99.4
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.35
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.33
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.32
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.3
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	99.29
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.28
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	99.22
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.2
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	99.17
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	99.08
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	99.08
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	99.07
4gxt_A	385	A conserved functionally unknown protein; structur	99.04
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	99.02
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	99.0
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	98.71
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.49
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	98.42
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	98.36
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	98.35
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.34
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.17
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	98.11
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.99
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	97.99
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	97.9
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	97.87
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.76
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	97.74
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.65
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	97.61
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	97.24
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	96.66
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.48
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.24
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	95.89
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	95.88
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	95.88
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	95.58
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	95.58
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	94.85
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	94.22
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	91.86
1wv2_A	265	Thiazole moeity, thiazole biosynthesis protein THI	90.63
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	89.89
2q5c_A	196	NTRC family transcriptional regulator; structural	89.76
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	88.63
2pju_A	225	Propionate catabolism operon regulatory protein; s	86.6
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	85.94
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	85.44
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	83.27
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	82.66
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	81.95
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	81.37
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	80.34

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=100.00  E-value=2.2e-32  Score=223.30  Aligned_cols=195  Identities=24%  Similarity=0.409  Sum_probs=153.5

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHH-HHcCCCCCcccC
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPSSTIFD  145 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~g~~~~~~~~  145 (298)
                      +|+|+||+||||+|+...+.++|.++++++|++...             +......|.......... ...+..      
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~------   61 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTE-------------DLHRRIMGVPEREGLPILMEALEIK------   61 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCH-------------HHHHHHTTSCHHHHHHHHHHHTTCC------
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhccchhhhhhhhhhcccch------
Confidence            689999999999999999999999999999876422             233445565555443333 332221      


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL  225 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f  225 (298)
                            .....+...+.+.+...+...     ..++||+.++++.|+++|++++++||+....+...++.+ ++..+  |
T Consensus        62 ------~~~~~~~~~~~~~~~~~~~~~-----~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~-~l~~~--f  127 (216)
T 3kbb_A           62 ------DSLENFKKRVHEEKKRVFSEL-----LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRL-DLEKY--F  127 (216)
T ss_dssp             ------SCHHHHHHHHHHHHHHHHHHH-----CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG--C
T ss_pred             ------hhHHHHHHHHHHHHHHHHHHh-----cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhc-CCCcc--c
Confidence                  122333334444444434433     478999999999999999999999999999999999998 99998  9


Q ss_pred             ceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE--EcCCCchhHhhhcC
Q 022348          226 DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI--TYTSSTAEQVRIID  294 (298)
Q Consensus       226 d~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~--~~~~~~~~~~~~~~  294 (298)
                      |.++++++++..||+|++|..+++++|++|++|+||||+.+|+++|+++||++|+  .++....+++.+.+
T Consensus       128 d~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~  198 (216)
T 3kbb_A          128 DVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAG  198 (216)
T ss_dssp             SEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTT
T ss_pred             cccccccccCCCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCC
Confidence            9999999999999999999999999999999999999999999999999999984  44555666666554

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.98  E-value=3e-31  Score=220.83  Aligned_cols=194  Identities=24%  Similarity=0.375  Sum_probs=145.1

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHH-HHHHHcCCCCCc
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSST  142 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~~  142 (298)
                      .|++|+|+||+||||+|+...+..+|.++++++|++...+.             .....|.+..... .++...+...  
T Consensus         2 ~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~-------------~~~~~g~~~~~~~~~~~~~~~~~~--   66 (243)
T 4g9b_A            2 VMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQF-------------NESLKGISRDESLRRILQHGGKEG--   66 (243)
T ss_dssp             CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTG-------------GGGGTTCCHHHHHHHHHHHTTCGG--
T ss_pred             CccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHH-------------HHHHcCCCHHHHHHHHHHHhhccc--
Confidence            35799999999999999999999999999999998754422             1223344444333 3333333210  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhc-CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                           ......    ...+.......+...+.. ....++||+.++++.|+++|++++++||+..  ....++.+ ++..
T Consensus        67 -----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~-gl~~  134 (243)
T 4g9b_A           67 -----DFNSQE----RAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAAL-ELRE  134 (243)
T ss_dssp             -----GCCHHH----HHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHT-TCGG
T ss_pred             -----chhHHH----HHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhh-hhcc
Confidence                 001111    122222223333333322 2346899999999999999999999998765  56678887 9999


Q ss_pred             ccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          222 FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       222 ~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      +  ||.++++++++.+||+|++|..+++++|++|++|+||||+.+|+++|+++||.+|++..+..
T Consensus       135 ~--fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~  197 (243)
T 4g9b_A          135 F--FTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLT  197 (243)
T ss_dssp             G--CSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCC
T ss_pred             c--cccccccccccCCCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence            8  99999999999999999999999999999999999999999999999999999998776544

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.97  E-value=1.2e-30  Score=218.18  Aligned_cols=193  Identities=23%  Similarity=0.364  Sum_probs=144.2

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      .|+|+|+||+||||+|+...+..+|.++++++|++...+..             ....|.........+.+....     
T Consensus        24 ~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~-----   85 (250)
T 4gib_A           24 AMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFN-------------ESLKGISRMESLDRILEFGNK-----   85 (250)
T ss_dssp             CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTGG-------------GGTTTCCHHHHHHHHHHHTTC-----
T ss_pred             chhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHH-------------HHHhCcchHHHHHHhhhhhcC-----
Confidence            47999999999999999999999999999999987544221             112333333333333222111     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhc-CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                       .....+..    ...+.+.....+...... ....++||+.++++.|+++|++++++|+...  ....++.+ |+..+ 
T Consensus        86 -~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~-gl~~~-  156 (250)
T 4gib_A           86 -KYSFSEEE----KVRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHL-GISDK-  156 (250)
T ss_dssp             -TTTSCHHH----HHHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHH-TCGGG-
T ss_pred             -CCCCCHHH----HHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hhhHhhhc-ccccc-
Confidence             01111222    222333344444444322 2346899999999999999999998776643  56788888 99998 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                       ||.++++++++.+||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|++.+..
T Consensus       157 -Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~  217 (250)
T 4gib_A          157 -FDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYE  217 (250)
T ss_dssp             -CSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTT
T ss_pred             -cceeecccccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChh
Confidence             9999999999999999999999999999999999999999999999999999999886543

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.97  E-value=8.5e-30  Score=211.50  Aligned_cols=205  Identities=24%  Similarity=0.300  Sum_probs=150.2

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCC-CCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHH-c-CCCC--
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVR-CDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-H-GWPS--  140 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~-g~~~--  140 (298)
                      ++|+|+||+||||+|+...+..++.++++++|+. ...            .+.+....|.+.......+.. . ++..  
T Consensus         3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   70 (240)
T 2hi0_A            3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFT------------VEDIKNFFGSGVVVAVTRALAYEAGSSRES   70 (240)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCC------------HHHHHHHCSSCHHHHHHHHHHHHTTCCHHH
T ss_pred             cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCC------------HHHHHHhcCccHHHHHHHHHHhcccccccc
Confidence            5899999999999999999999999999999875 222            223445566654444333220 0 0000  


Q ss_pred             ----CcccCC--CCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHH
Q 022348          141 ----STIFDN--PPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE  214 (298)
Q Consensus       141 ----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~  214 (298)
                          ...+..  .....+.    ...+.+.+.+.|.... .....++||+.++|+.|+++|++++|+||+....+...++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~  145 (240)
T 2hi0_A           71 LVAFGTKDEQIPEAVTQTE----VNRVLEVFKPYYADHC-QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVE  145 (240)
T ss_dssp             HTTTTSTTCCCCTTCCHHH----HHHHHHHHHHHHHHTS-SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHH
T ss_pred             cccccccccccCCCCCHHH----HHHHHHHHHHHHHHhh-hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence                000000  0111111    2333344444444332 2345789999999999999999999999999888889999


Q ss_pred             HHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC-chhHhh
Q 022348          215 NLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS-TAEQVR  291 (298)
Q Consensus       215 ~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~-~~~~~~  291 (298)
                      .+ ++. +  |+.++++++++.+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|++..+. ..+++.
T Consensus       146 ~~-~l~-~--f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~  219 (240)
T 2hi0_A          146 EL-FPG-S--FDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQ  219 (240)
T ss_dssp             HH-STT-T--CSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHH
T ss_pred             Hc-CCc-c--eeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHH
Confidence            98 887 7  8999999999999999999999999999999999999999999999999999999775543 444544

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.97  E-value=2.9e-30  Score=210.05  Aligned_cols=190  Identities=14%  Similarity=0.217  Sum_probs=143.3

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      |++|+|+||+||||+|+...+..++.++++++|+....            .+.+....|.+..   ..+... +      
T Consensus         2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~---~~~~~~-~------   59 (210)
T 2ah5_A            2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPD------------AKTIRGFMGPPLE---SSFATC-L------   59 (210)
T ss_dssp             TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCC------------HHHHHHTSSSCHH---HHHHTT-S------
T ss_pred             CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHcCccHH---HHHHHH-c------
Confidence            45899999999999999988889999999999875422            1233444454432   222221 1      


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                           ..+...+    +.+.+.+.+.... .....++||+.++|+.|++ |++++|+||+....+...++.+ ++..+  
T Consensus        60 -----~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~-gl~~~--  125 (210)
T 2ah5_A           60 -----SKDQISE----AVQIYRSYYKAKG-IYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNL-EIHHF--  125 (210)
T ss_dssp             -----CGGGHHH----HHHHHHHHHHHTG-GGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHT-TCGGG--
T ss_pred             -----CHHHHHH----HHHHHHHHHHHhc-cCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhc-Cchhh--
Confidence                 1112222    2233333333321 1235789999999999999 9999999999988889999988 99988  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC-CchhHhhh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS-STAEQVRI  292 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~-~~~~~~~~  292 (298)
                      ||.+++++  +..||+|++|..+++++|++|++|++|||+.+|+++|+++|+.++++..+ ...++++.
T Consensus       126 f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~  192 (210)
T 2ah5_A          126 FDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLN  192 (210)
T ss_dssp             CSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHT
T ss_pred             eeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHh
Confidence            99999887  78999999999999999999999999999999999999999999977544 33555543

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.97  E-value=9.1e-29  Score=204.39  Aligned_cols=198  Identities=20%  Similarity=0.290  Sum_probs=154.0

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcc
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI  143 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~  143 (298)
                      ..++|+|+||+||||+++...+..++.++++++|. ...            .+.+....|.+.......+.....     
T Consensus        16 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~-~~~------------~~~~~~~~g~~~~~~~~~~~~~~~-----   77 (237)
T 4ex6_A           16 AAADRGVILDLDGTLADTPAAIATITAEVLAAMGT-AVS------------RGAILSTVGRPLPASLAGLLGVPV-----   77 (237)
T ss_dssp             -CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTC-CCC------------HHHHHHHTTSCHHHHHHHHHTSCT-----
T ss_pred             cccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCC-CCC------------HHHHHHhcCccHHHHHHHHhCCCC-----
Confidence            44899999999999999999999999999999882 222            234455667666555444432211     


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhc-CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccc
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF  222 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~  222 (298)
                            .......+    ...+.+.+.+.+.. ....++||+.++|+.|+++|++++++||+....++..++.+ ++..+
T Consensus        78 ------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~  146 (237)
T 4ex6_A           78 ------EDPRVAEA----TEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELT-GLDTR  146 (237)
T ss_dssp             ------TSHHHHHH----HHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHH-TGGGT
T ss_pred             ------CHHHHHHH----HHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc-Cchhh
Confidence                  12233333    33333334443320 34579999999999999999999999999999899999998 99888


Q ss_pred             cCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC-CchhHhhh
Q 022348          223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS-STAEQVRI  292 (298)
Q Consensus       223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~-~~~~~~~~  292 (298)
                        |+.++++++++.+||+|++|+.+++++|++|++|++|||+.+|++||+.+|+.++++..+ ...++++.
T Consensus       147 --f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~  215 (237)
T 4ex6_A          147 --LTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMR  215 (237)
T ss_dssp             --CSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHH
T ss_pred             --eeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHh
Confidence              999999999999999999999999999999999999999999999999999999977655 44455554

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.96  E-value=2.7e-29  Score=203.67  Aligned_cols=189  Identities=24%  Similarity=0.342  Sum_probs=147.1

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHH-HcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFK-EHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~  144 (298)
                      ++|+|+||+||||+++...+..++.++++++|......             .+....|.........+. ..+..     
T Consensus         4 m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~~~g~~~~~~~~~~~~~~~~~-----   65 (214)
T 3e58_A            4 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHL-------------PPSFFIGGNTKQVWENILRDEYDK-----   65 (214)
T ss_dssp             CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTS-------------CHHHHTTSCGGGCHHHHHGGGGGG-----
T ss_pred             cccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHH-------------HHHHHcCCCHHHHHHHHHHhhcCC-----
Confidence            68999999999999999989999999999998754332             233345555554444332 22211     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                             ...    ..+.+.+.+.+..........++||+.++|+.|+++|++++++||+....++..++.+ ++..+  
T Consensus        66 -------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--  131 (214)
T 3e58_A           66 -------WDV----STLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEEN-RLQGF--  131 (214)
T ss_dssp             -------SCH----HHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred             -------CCH----HHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHc-CcHhh--
Confidence                   111    2222333333333211112368999999999999999999999999999999999998 99988  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      |+.++++++.+..||+|++|+.+++++|++|++|++|||+.+|+++|+.+|+.+++++.+..
T Consensus       132 f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~  193 (214)
T 3e58_A          132 FDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEF  193 (214)
T ss_dssp             CSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSS
T ss_pred             eeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCc
Confidence            99999999999999999999999999999999999999999999999999999998886543

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.96  E-value=2.1e-28  Score=201.30  Aligned_cols=198  Identities=21%  Similarity=0.350  Sum_probs=153.3

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHH-HHHHcCCCCCcc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTI  143 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~  143 (298)
                      .++|+|+||+||||+++...+..++..+++++|+....             +.+....|........ ++...+..    
T Consensus         4 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~----   66 (233)
T 3s6j_A            4 RPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAM-------------WRIHRKIGMSGGLMLKSLSRETGMS----   66 (233)
T ss_dssp             -CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHTTSCHHHHHHHHHHC--------
T ss_pred             CcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCH-------------HHHHHHcCCcHHHHHHHHHHhcCCC----
Confidence            36899999999999999998999999999998876432             2344456666554433 33333321    


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                           ...+.    ...+.+.+.+.+....  ....++||+.++|+.|++.|++++++||+....+...++.+ ++..+ 
T Consensus        67 -----~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~-  133 (233)
T 3s6j_A           67 -----ITDEQ----AERLSEKHAQAYERLQ--HQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKAL-KLDIN-  133 (233)
T ss_dssp             -----CCHHH----HHHHHHHHHHHHHHTG--GGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTT-TCCTT-
T ss_pred             -----CCHHH----HHHHHHHHHHHHHHhh--ccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhc-chhhh-
Confidence                 11122    2333344444444432  34679999999999999999999999999998899999988 99888 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC-CCchhHhhhc
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT-SSTAEQVRII  293 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~-~~~~~~~~~~  293 (298)
                       |+.++++++.+.+||++.+|+.+++++|++|++|++|||+.+|+++|+.+|+.++++.. ....++++..
T Consensus       134 -f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~  203 (233)
T 3s6j_A          134 -KINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERA  203 (233)
T ss_dssp             -SSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHT
T ss_pred             -hheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhc
Confidence             99999999999999999999999999999999999999999999999999999997754 4666666654

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.96  E-value=6.1e-28  Score=200.72  Aligned_cols=196  Identities=21%  Similarity=0.266  Sum_probs=147.6

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHH-HHHcCCCCCc
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWY-FKEHGWPSST  142 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~g~~~~~  142 (298)
                      ..++|+|+||+||||+|+...+..++.++++++|.....            .+.+....|.+....... +....    .
T Consensus        20 ~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~----~   83 (243)
T 2hsz_A           20 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQAS------------ENLVMTWIGNGADVLSQRAVDWAC----K   83 (243)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCC------------HHHHHHHCSSCHHHHHHHHHHHHH----H
T ss_pred             CccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhCchHHHHHHHHhhhhh----c
Confidence            347899999999999999999999999999999875432            123444556554433222 21100    0


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccc
Q 022348          143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF  222 (298)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~  222 (298)
                      .+. .....+.    ...+.+.+.+.|.... .....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+
T Consensus        84 ~~~-~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-gl~~~  156 (243)
T 2hsz_A           84 QAE-KELTEDE----FKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF-GIDHL  156 (243)
T ss_dssp             HHT-CCCCHHH----HHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG
T ss_pred             ccc-ccCCHHH----HHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHc-Cchhe
Confidence            000 0011111    2222333444444433 234579999999999999999999999999998899999998 99888


Q ss_pred             cCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                        |+.++++++++..||+|.+|..+++++|+++++|++|||+.+|+++|+.+|+.++++..+
T Consensus       157 --f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g  216 (243)
T 2hsz_A          157 --FSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYG  216 (243)
T ss_dssp             --CSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS
T ss_pred             --EEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCC
Confidence              899999999999999999999999999999999999999999999999999999977554

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.96  E-value=1.8e-28  Score=204.43  Aligned_cols=194  Identities=22%  Similarity=0.389  Sum_probs=150.3

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHH-HHHHHcCCCCCc
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSST  142 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~~  142 (298)
                      ++++|+|+||+||||+++...+..++.++++++|+....             +.+....|....... .++...|+..  
T Consensus        27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~--   91 (250)
T 3l5k_A           27 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSW-------------DVKSLVMGKKALEAAQIIIDVLQLPM--   91 (250)
T ss_dssp             CCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHTTCCHHHHHHHHHHHHTCSS--
T ss_pred             ccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCCC--
Confidence            457999999999999999998999999999999876422             234445666555443 3444555321  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccc
Q 022348          143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF  222 (298)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~  222 (298)
                                ..    ..+...+.+.+...+  ....++||+.++|+.|+++|++++|+||+....+...+....++..+
T Consensus        92 ----------~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~  155 (250)
T 3l5k_A           92 ----------SK----EELVEESQTKLKEVF--PTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL  155 (250)
T ss_dssp             ----------CH----HHHHHHHHHHHHHHG--GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT
T ss_pred             ----------CH----HHHHHHHHHHHHHHh--ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh
Confidence                      11    222333334444443  24679999999999999999999999999987777666543377777


Q ss_pred             cCcceEEeCC--CCCCCCCCHHHHHHHHHHhCCCC--CcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHh
Q 022348          223 EGLDCFLAGD--DVKQKKPDPSIYVTAAKRLGISE--KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQV  290 (298)
Q Consensus       223 ~~fd~v~~~~--~~~~~KP~~~~~~~~~~~lgi~~--~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~  290 (298)
                        |+.+++++  +++..||+|++|+.+++++|+++  ++|++|||+.+|+++|+.+|+.++++..+....++
T Consensus       156 --f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~  225 (250)
T 3l5k_A          156 --FSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDL  225 (250)
T ss_dssp             --SSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGG
T ss_pred             --eeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhh
Confidence              89999999  89999999999999999999998  99999999999999999999999988776654443

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.96  E-value=2.8e-28  Score=199.89  Aligned_cols=192  Identities=13%  Similarity=0.199  Sum_probs=145.6

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcccC
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD  145 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~  145 (298)
                      ++|+|+||+||||+++...+..++.++++++|.......            .+....|.+.......+  .+++      
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~------------~~~~~~g~~~~~~~~~~--~~~~------   62 (226)
T 3mc1_A            3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLS------------SLNKFVGPPLKTSFMEY--YNFD------   62 (226)
T ss_dssp             CCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGG------------GGGGGSSSCHHHHHHHH--HCCC------
T ss_pred             CCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHH------------HHHHHhCcCHHHHHHHH--hCCC------
Confidence            589999999999999998888999999999987653311            22223344333222111  1221      


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL  225 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f  225 (298)
                           .+.    ...+...+.+.+.... .....++||+.++|+.|+++|++++++||+....+...++.+ ++..+  |
T Consensus        63 -----~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~~--f  129 (226)
T 3mc1_A           63 -----EET----ATVAIDYYRDYFKAKG-MFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHF-KLAFY--F  129 (226)
T ss_dssp             -----HHH----HHHHHHHHHHHHTTTG-GGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHT-TCGGG--C
T ss_pred             -----HHH----HHHHHHHHHHHHHHhC-cccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-CCHhh--e
Confidence                 111    1222222222222211 123579999999999999999999999999999899999998 99988  9


Q ss_pred             ceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC-CchhHh
Q 022348          226 DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS-STAEQV  290 (298)
Q Consensus       226 d~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~-~~~~~~  290 (298)
                      +.++++++++.+||+|.+|+.+++++|++|++|++|||+.+|+++|+.+|+.++++..+ ...+++
T Consensus       130 ~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~  195 (226)
T 3mc1_A          130 DAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEEL  195 (226)
T ss_dssp             SEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHH
T ss_pred             eeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999977644 455554

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.96  E-value=9.2e-28  Score=199.36  Aligned_cols=196  Identities=22%  Similarity=0.382  Sum_probs=146.5

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhh-HHHHHHH-cCCCCC
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKE-HGWPSS  141 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~-~g~~~~  141 (298)
                      ++++|+|+||+||||+++...+..++.++++++|+....             +.+....|..... +..++.+ ++..  
T Consensus        21 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~--   85 (243)
T 3qxg_A           21 RKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSR-------------EEAYMHEGRTGASTINIVFQRELGKE--   85 (243)
T ss_dssp             -CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCH-------------HHHHHTTTSCHHHHHHHHHHHHHSSC--
T ss_pred             cccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHHhCCCHHHHHHHHHHHHhCCC--
Confidence            457999999999999999999999999999999876432             1233344444333 2333322 3322  


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                             ...+.    ...+...+.+.+..   .....++||+.++|+.|+++|++++++||+....+...++.  ++..
T Consensus        86 -------~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~  149 (243)
T 3qxg_A           86 -------ATQEE----IESIYHEKSILFNS---YPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH--NFPG  149 (243)
T ss_dssp             -------CCHHH----HHHHHHHHHHHHHT---SSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH--HSTT
T ss_pred             -------CCHHH----HHHHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH--hHHH
Confidence                   11111    12222222222222   23467999999999999999999999999998878777776  7887


Q ss_pred             ccCc--ceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC-CchhHhhh
Q 022348          222 FEGL--DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS-STAEQVRI  292 (298)
Q Consensus       222 ~~~f--d~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~-~~~~~~~~  292 (298)
                      +  |  |.++++++++.+||+|++|+.+++++|++|++|++|||+.+|+++|+.+|+.+|++..+ ...+++..
T Consensus       150 ~--f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~  221 (243)
T 3qxg_A          150 M--FHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLD  221 (243)
T ss_dssp             T--CCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHH
T ss_pred             h--cCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHh
Confidence            7  8  89999999999999999999999999999999999999999999999999999976554 44445443

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.96  E-value=2.3e-28  Score=200.56  Aligned_cols=183  Identities=23%  Similarity=0.344  Sum_probs=140.5

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCC-CCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRC-DPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      ++|+|+||+||||+|+...+..++.++++++|... ..+.             +....|.+.......+..         
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-------------~~~~~g~~~~~~~~~~~~---------   59 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDN-------------VTKYIGGGVRALLEKVLK---------   59 (222)
T ss_dssp             EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSC-------------GGGGCSSCHHHHHHHHHG---------
T ss_pred             CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHH-------------HHHHhCcCHHHHHHHHhC---------
Confidence            58999999999999999988899999999998752 2211             122334433332222211         


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                            ....    +.+.+.+.+.+.... .....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+  
T Consensus        60 ------~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-gl~~~--  125 (222)
T 2nyv_A           60 ------DKFR----EEYVEVFRKHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDIL-NLSGY--  125 (222)
T ss_dssp             ------GGCC----THHHHHHHHHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG--
T ss_pred             ------hHHH----HHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCHHH--
Confidence                  0001    111222233333221 235679999999999999999999999999998899999998 99888  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      |+.++++++++..||+|++|..+++++|++|++|++|||+.+|+++|+.+|+.++++..+
T Consensus       126 f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g  185 (222)
T 2nyv_A          126 FDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWG  185 (222)
T ss_dssp             CSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTS
T ss_pred             heEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCC
Confidence            999999999999999999999999999999999999999999999999999999876543

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.96  E-value=4.6e-28  Score=199.63  Aligned_cols=190  Identities=26%  Similarity=0.378  Sum_probs=136.4

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHH-HHHHHcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~  144 (298)
                      ++|+|+||+||||+++...+..++.++++++|+....             +.+....|....... .++...|..     
T Consensus         1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~-----   62 (233)
T 3nas_A            1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDR-------------DMNERLKGISREESLESILIFGGAE-----   62 (233)
T ss_dssp             -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHTTTCCHHHHHHHHHHHTTCT-----
T ss_pred             CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHcCCCHHHHHHHHHHHhCCC-----
Confidence            3789999999999999988999999999999876322             234445566655443 334444431     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhc-CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                        ........    ..+...+.+.+...+.. ....++||+.++|+.|+++|++++|+||+..  ....++.+ ++..+ 
T Consensus        63 --~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~-gl~~~-  132 (233)
T 3nas_A           63 --TKYTNAEK----QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRL-AIIDD-  132 (233)
T ss_dssp             --TTSCHHHH----HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHT-TCTTT-
T ss_pred             --CCCCHHHH----HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHc-CcHhh-
Confidence              01112222    23333444445544432 1234899999999999999999999999855  77788888 99888 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                       |+.++++++++.+||+|++|..+++++|++|++|++|||+.+|++||+.+|+.++++++.
T Consensus       133 -f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~  192 (233)
T 3nas_A          133 -FHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQG  192 (233)
T ss_dssp             -CSEECCC---------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--
T ss_pred             -cCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCc
Confidence             999999999999999999999999999999999999999999999999999999988765

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.96  E-value=7.4e-28  Score=201.81  Aligned_cols=186  Identities=25%  Similarity=0.358  Sum_probs=147.5

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHH-HHcCCCCCcc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPSSTI  143 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~g~~~~~~  143 (298)
                      +++|+|+||+||||+|+...+..++.++++++|.....            .+.+....|.........+ ..+|...   
T Consensus        26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~---   90 (259)
T 4eek_A           26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDL------------TEIAMYFTGQRFDGVLAYLAQQHDFVP---   90 (259)
T ss_dssp             CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCH------------HHHHHHTTTCCHHHHHHHHHHHHCCCC---
T ss_pred             cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCH------------HHHHHHHhCCCHHHHHHHHHHHcCCCC---
Confidence            47999999999999999998999999999998876432            1223445566655554443 3445431   


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                            ....    ...+.+.+.+.+      ....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+ 
T Consensus        91 ------~~~~----~~~~~~~~~~~~------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~-  152 (259)
T 4eek_A           91 ------PPDF----LDVLETRFNAAM------TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVA-GLTEL-  152 (259)
T ss_dssp             ------CTTH----HHHHHHHHHHHH------TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHT-TCHHH-
T ss_pred             ------CHHH----HHHHHHHHHHHh------ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhc-ChHhh-
Confidence                  1111    122222222222      45689999999999999999999999999998899999998 99988 


Q ss_pred             Ccce-EEeCCCCC-CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          224 GLDC-FLAGDDVK-QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       224 ~fd~-v~~~~~~~-~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                       |+. ++++++.+ .+||++++|+.+++++|++|++|++|||+.+|+++|+.+|+.++++..+
T Consensus       153 -f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g  214 (259)
T 4eek_A          153 -AGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVP  214 (259)
T ss_dssp             -HCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCT
T ss_pred             -ccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccC
Confidence             898 99999999 9999999999999999999999999999999999999999999977543

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.96  E-value=1.7e-27  Score=197.69  Aligned_cols=195  Identities=24%  Similarity=0.398  Sum_probs=143.2

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhH-HHHHHH-cCCCCC
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKE-HGWPSS  141 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~g~~~~  141 (298)
                      ++++|+|+||+||||+++...+..++.++++++|+....             +......|...... ..++.+ ++..  
T Consensus        20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~--   84 (247)
T 3dv9_A           20 SIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSR-------------EEAYMHEGRTGASTINIVSRRERGHD--   84 (247)
T ss_dssp             CCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCH-------------HHHHHTTTSCHHHHHHHHHHHHHSSC--
T ss_pred             CCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCCChHHHHHHHHHHhcCCC--
Confidence            457999999999999999998989999999999876432             12233444443332 233322 3322  


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                             ...+.    ...+...+...+..   .....++||+.++|+.|+++|++++++||+....+...++.  ++..
T Consensus        85 -------~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~  148 (247)
T 3dv9_A           85 -------ATEEE----IKAIYQAKTEEFNK---CPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH--NFPG  148 (247)
T ss_dssp             -------CCHHH----HHHHHHHHHHHHTT---SCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH--HSTT
T ss_pred             -------CCHHH----HHHHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh--hHHH
Confidence                   11111    12222222222221   13467999999999999999999999999998877777776  7787


Q ss_pred             ccCc--ceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC-CchhHhh
Q 022348          222 FEGL--DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS-STAEQVR  291 (298)
Q Consensus       222 ~~~f--d~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~-~~~~~~~  291 (298)
                      +  |  |.++++++++.+||+|++|+.+++++|++|++|++|||+.+|+++|+.+|+.++++..+ ...+++.
T Consensus       149 ~--f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~  219 (247)
T 3dv9_A          149 I--FQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLL  219 (247)
T ss_dssp             T--CCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHH
T ss_pred             h--cCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHH
Confidence            7  8  89999999999999999999999999999999999999999999999999999977654 4444443

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.96  E-value=2.3e-27  Score=195.75  Aligned_cols=194  Identities=16%  Similarity=0.268  Sum_probs=141.8

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChh--------hHHHHHHH
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP--------KMRWYFKE  135 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--------~~~~~~~~  135 (298)
                      ++++|+|+||+||||+++...+..++.++++++|+.......+.+.   .....+...+..+..        .+...+.+
T Consensus         4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (238)
T 3ed5_A            4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYK---TINQGLWRAFEEGKMTRDEVVNTRFSALLKE   80 (238)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHH---HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred             cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHH---HHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence            3579999999999999999989999999999998765331100000   000000000101100        11222233


Q ss_pred             cCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHH
Q 022348          136 HGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN  215 (298)
Q Consensus       136 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~  215 (298)
                      .|++.            ..        ..+.+.|..... ....++||+.++|+.|++. ++++++||+....+...++.
T Consensus        81 ~~~~~------------~~--------~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~  138 (238)
T 3ed5_A           81 YGYEA------------DG--------ALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRD  138 (238)
T ss_dssp             TTCCC------------CH--------HHHHHHHHHHHT-TCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHH
T ss_pred             cCCCC------------cH--------HHHHHHHHHHHH-hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHH
Confidence            33220            00        122233444432 3467999999999999999 99999999999988999999


Q ss_pred             HhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhC-CCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCC
Q 022348          216 LIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG-ISEKDCLVVEDSV-IGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       216 ~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lg-i~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~  285 (298)
                      + ++..+  |+.++++++.+..||+|.+|+.+++++| ++|++|++|||+. +|+++|+.+|+.++++..+.
T Consensus       139 ~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~  207 (238)
T 3ed5_A          139 S-GLFPF--FKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDM  207 (238)
T ss_dssp             T-TCGGG--CSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTC
T ss_pred             c-ChHhh--hheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCC
Confidence            8 99988  9999999999999999999999999999 9999999999998 99999999999999876654

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.95  E-value=5.4e-27  Score=198.03  Aligned_cols=193  Identities=21%  Similarity=0.299  Sum_probs=141.9

Q ss_pred             cCCccEEEEecCCccccchhHH-HHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhh-----------HHH
Q 022348           64 SQSLQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-----------MRW  131 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~  131 (298)
                      ++++|+|+||+||||+++.... ..++..+++++|+......             +....+.....           ...
T Consensus        11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~   77 (277)
T 3iru_A           11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAE-------------AREPMGTEKSEHIRRMLGNSRIANA   77 (277)
T ss_dssp             CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHH-------------HHTTTTSCHHHHHHHHTTSHHHHHH
T ss_pred             hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHH-------------HHHHhcCchHHHHHHhccchHHHHH
Confidence            3469999999999999987655 7889999999988643322             22222222211           111


Q ss_pred             HHHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHH
Q 022348          132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL  211 (298)
Q Consensus       132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~  211 (298)
                      +...++..         ...+...++.    ..+.+.+.+.+. ....++||+.++|+.|+++|++++++||+....+..
T Consensus        78 ~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~  143 (277)
T 3iru_A           78 WLSIKGQA---------SNEEDIKRLY----DLFAPIQTRIVA-QRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAP  143 (277)
T ss_dssp             HHHHHSSC---------CCHHHHHHHH----HHHHHHHHHHHH-HTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred             HHHHhccC---------CCHHHHHHHH----HHHHHHHHHHhh-ccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHH
Confidence            22222221         1222222222    333333333332 235799999999999999999999999999988898


Q ss_pred             HHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       212 ~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~-~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      .++.+ ++..+. |+.++++++++.+||+|.+|+.+++++|++| ++|++|||+.+|+++|+.+|+.+|++..+.
T Consensus       144 ~l~~~-~~~~~~-~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~  216 (277)
T 3iru_A          144 ALIAA-KEQGYT-PASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSG  216 (277)
T ss_dssp             HHHHH-HHTTCC-CSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSS
T ss_pred             HHHhc-CcccCC-CceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCC
Confidence            99887 765432 6999999999999999999999999999999 999999999999999999999999776663

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.95  E-value=7.5e-28  Score=198.18  Aligned_cols=183  Identities=15%  Similarity=0.204  Sum_probs=138.1

Q ss_pred             cCCccEEEEecCCccccchhHHHHHH-HHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHc-CCCCC
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAY-NDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEH-GWPSS  141 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-g~~~~  141 (298)
                      ++++|+|+||+||||+|+...+..++ .++++++|.+...-               ....|...   ..++... +    
T Consensus        22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~---------------~~~~g~~~---~~~~~~~~~----   79 (231)
T 3kzx_A           22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDL---------------DSIPNSTI---PKYLITLLG----   79 (231)
T ss_dssp             CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCCC---------------TTSCTTTH---HHHHHHHHG----
T ss_pred             cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHHH---------------HHHhCccH---HHHHHHHhC----
Confidence            45799999999999999987777778 99999988764210               01111111   1111111 0    


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                                ..    .......+.+.+..........++||+.++|+.|+++|++++++||+....+...++.+ ++..
T Consensus        80 ----------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~  144 (231)
T 3kzx_A           80 ----------KR----WKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHK-NLTH  144 (231)
T ss_dssp             ----------GG----HHHHHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCGG
T ss_pred             ----------ch----HHHHHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHC-Cchh
Confidence                      00    11112222222221111345679999999999999999999999999999899999998 9998


Q ss_pred             ccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC-cEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          222 FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK-DCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       222 ~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~-~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      +  |+.++++++++.+||+|++|+.+++++|++|+ +|++|||+.+|+++|+.+|+.+|++....
T Consensus       145 ~--f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~  207 (231)
T 3kzx_A          145 Y--FDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTN  207 (231)
T ss_dssp             G--CSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--
T ss_pred             h--eeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCC
Confidence            8  99999999999999999999999999999999 99999999999999999999999875544

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.95  E-value=1.1e-27  Score=194.35  Aligned_cols=190  Identities=16%  Similarity=0.290  Sum_probs=143.7

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      |++|+|+||+||||+|+...+...+.++++++|.....             +.+....|.....   .+...+++     
T Consensus         2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~---~~~~~~~~-----   60 (209)
T 2hdo_A            2 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSP-------------AQAQKTFPMAAEQ---AMTELGIA-----   60 (209)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCH-------------HHHHHHTTSCHHH---HHHHTTCC-----
T ss_pred             CcccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHHcCCcHHH---HHHHcCCC-----
Confidence            36899999999999999999999999999998874321             2344455654433   33333322     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                            .....+.   +.++. ..+...  .....++||+.++|+.|+++ ++++|+||+....+...++.+ ++..+  
T Consensus        61 ------~~~~~~~---~~~~~-~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~-~l~~~--  124 (209)
T 2hdo_A           61 ------ASEFDHF---QAQYE-DVMASH--YDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSY-PFMMR--  124 (209)
T ss_dssp             ------GGGHHHH---HHHHH-HHHTTC--GGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTS-GGGGG--
T ss_pred             ------HHHHHHH---HHHHH-HHHhhh--cccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHc-ChHhh--
Confidence                  1111111   11111 111111  13457899999999999999 999999999988888889887 88877  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc-CCCchhHhh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY-TSSTAEQVR  291 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~-~~~~~~~~~  291 (298)
                      |+.++++++.+..||+|.+|..+++++|++|++|++|||+.+|+++|+.+|+.+++++ +....++++
T Consensus       125 f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~  192 (209)
T 2hdo_A          125 MAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQ  192 (209)
T ss_dssp             EEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGS
T ss_pred             ccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhc
Confidence            8999999999999999999999999999999999999999999999999999999776 433344444

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.95  E-value=6.4e-27  Score=193.20  Aligned_cols=193  Identities=17%  Similarity=0.282  Sum_probs=142.8

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHH-------HhcCCh---h-----hH
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-------QIGGGK---P-----KM  129 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~---~-----~~  129 (298)
                      |++|+|+||+||||+++...+..++.++++++|+.....+.      ......+..       ....+.   .     .+
T Consensus         3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (240)
T 3qnm_A            3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSF------DHYYTLYQRRNTELWLEYGEGKVTKEELNRQRF   76 (240)
T ss_dssp             CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSH------HHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred             CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCH------HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence            36999999999999999988889999999999876421110      111111111       000010   0     12


Q ss_pred             HHHHHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhH
Q 022348          130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV  209 (298)
Q Consensus       130 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~  209 (298)
                      ...+...|++              .    ......+.+.+.... .....++||+.++|+.|+ +|++++++||+....+
T Consensus        77 ~~~~~~~~~~--------------~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~  136 (240)
T 3qnm_A           77 FYPLQAVGVE--------------D----EALAERFSEDFFAII-PTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQ  136 (240)
T ss_dssp             HHHHHHTTCC--------------C----HHHHHHHHHHHHHHG-GGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHH
T ss_pred             HHHHHHcCCC--------------c----HHHHHHHHHHHHHHh-hhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHH
Confidence            2233333321              0    111222223333332 234679999999999999 9999999999999989


Q ss_pred             HHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCCc
Q 022348          210 ILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       210 ~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      ...++.+ ++..+  |+.++++++.+..||++.+|+.+++++|++|++|++|||+. +|+++|+.+|+.+++++.+..
T Consensus       137 ~~~l~~~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~  211 (240)
T 3qnm_A          137 SRKMRSA-GVDRY--FKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER  211 (240)
T ss_dssp             HHHHHHH-TCGGG--CSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred             HHHHHHc-ChHhh--ceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC
Confidence            9999998 99988  99999999999999999999999999999999999999996 999999999999998887764

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.95  E-value=1.5e-26  Score=191.87  Aligned_cols=190  Identities=19%  Similarity=0.237  Sum_probs=137.1

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCC-hHHHHHHHHHh--cC--ChhhHHHHHHHc-CCC
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD-PEFYDVLQNQI--GG--GKPKMRWYFKEH-GWP  139 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--g~--~~~~~~~~~~~~-g~~  139 (298)
                      ++|+|+||+||||+|+...+..++.+++++++.....       .. ...+..+....  ..  ....+..++... |..
T Consensus         1 m~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   73 (241)
T 2hoq_A            1 MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLP-------VDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPY   73 (241)
T ss_dssp             CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCC-------SCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCC
T ss_pred             CccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHcccc-------ccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCc
Confidence            3789999999999999988888888888877422100       01 12222221100  00  111133333433 321


Q ss_pred             CCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCC
Q 022348          140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM  219 (298)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l  219 (298)
                                 ..   .....+.+.+.+.+..     ...++||+.++|+.|+++|++++|+||+....+...++.+ ++
T Consensus        74 -----------~~---~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l  133 (241)
T 2hoq_A           74 -----------NP---KWISAGVIAYHNTKFA-----YLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRL-EL  133 (241)
T ss_dssp             -----------CH---HHHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHT-TC
T ss_pred             -----------cc---hHHHHHHHHHHHHHHh-----hCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHc-Cc
Confidence                       00   1112222222222221     2468999999999999999999999999988888899988 99


Q ss_pred             ccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCC
Q 022348          220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTS  284 (298)
Q Consensus       220 ~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~  284 (298)
                      ..+  |+.++++++++..||+|++|..+++++|++|++|++|||+. +|+++|+.+|+.++++..+
T Consensus       134 ~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g  197 (241)
T 2hoq_A          134 DDF--FEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG  197 (241)
T ss_dssp             GGG--CSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS
T ss_pred             Hhh--ccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC
Confidence            988  99999999999999999999999999999999999999998 9999999999999977544

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.95  E-value=3.8e-27  Score=198.22  Aligned_cols=190  Identities=18%  Similarity=0.254  Sum_probs=141.2

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHH-------H-------hcCChhh----
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-------Q-------IGGGKPK----  128 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-------~g~~~~~----  128 (298)
                      +|+|+||+||||+++...+..++.++++++|+.....         .....+..       .       .|.....    
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   71 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPS---------ALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLD   71 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHH---------HHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHH
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHH---------HHHHHHHHHHHHhhhhccccccccCCCHHHHHHH
Confidence            5899999999999998878889999999999764321         11111110       0       1222111    


Q ss_pred             -HHHHHHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChh
Q 022348          129 -MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS  207 (298)
Q Consensus       129 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~  207 (298)
                       +...+...|..          .       ...+.......+..+.....+.++||+.++|+.|+++|++++|+||....
T Consensus        72 ~~~~~~~~~~~~----------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~  134 (263)
T 3k1z_A           72 VVLQTFHLAGVQ----------D-------AQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR  134 (263)
T ss_dssp             HHHHHHHHTTCC----------C-------HHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred             HHHHHHHHcCCC----------C-------HHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH
Confidence             12223333221          0       12223333444444433334579999999999999999999999998764


Q ss_pred             hHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCCc
Q 022348          208 SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       208 ~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~  286 (298)
                       +...++.+ ++..+  |+.++++++++..||+|.+|..+++++|++|++|+||||+. +|+++|+++|+.+++++.+..
T Consensus       135 -~~~~l~~~-gl~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~  210 (263)
T 3k1z_A          135 -LEGILGGL-GLREH--FDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQA  210 (263)
T ss_dssp             -HHHHHHHT-TCGGG--CSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSC
T ss_pred             -HHHHHHhC-CcHHh--hhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCC
Confidence             68888888 99988  99999999999999999999999999999999999999997 999999999999998877654

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.95  E-value=2.8e-27  Score=194.81  Aligned_cols=198  Identities=15%  Similarity=0.191  Sum_probs=144.5

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhh-cCCCCCCCccccCCCChHHHHHHHHHhcCChhh-HHHHHHHcCCCCCcc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSH-FNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTI  143 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~g~~~~~~  143 (298)
                      ++|+|+||+||||+|+...+..++.+++++ +|.....              .+....|..... +..++...|+.    
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~----   64 (234)
T 2hcf_A            3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGST--------------GSHDFSGKMDGAIIYEVLSNVGLE----   64 (234)
T ss_dssp             CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC-----------------CCTTCCHHHHHHHHHHTTTCC----
T ss_pred             cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCcc--------------chhhhcCCChHHHHHHHHHHcCCC----
Confidence            589999999999999998888899999888 6765431              122234544444 34445544432    


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHC-CCeEEEEeCCChhhHHHHHHHHhCCccc
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMERF  222 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~-g~~i~i~S~~~~~~~~~~l~~~~~l~~~  222 (298)
                             .....+....+...+...+.+.+......++||+.++|+.|+++ |++++|+||+....+...++.+ ++..+
T Consensus        65 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~~  136 (234)
T 2hcf_A           65 -------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP-GIDHY  136 (234)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT-TCSTT
T ss_pred             -------cccchhHHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHC-Cchhh
Confidence                   00001112233333334444332113457899999999999999 9999999999998888889888 99888


Q ss_pred             cCcceEEeCCCCC-CCCCCHHHHHHHHHHhC--CCCCcEEEEecChhhHHHHHHcCCeEEEEcCC-CchhHhh
Q 022348          223 EGLDCFLAGDDVK-QKKPDPSIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRAGMACVITYTS-STAEQVR  291 (298)
Q Consensus       223 ~~fd~v~~~~~~~-~~KP~~~~~~~~~~~lg--i~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~-~~~~~~~  291 (298)
                        |+.++.+++.. .+||.+.+|+.+++++|  ++|++|++|||+.+|+++|+.+|+.++++..+ ...+++.
T Consensus       137 --f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~  207 (234)
T 2hcf_A          137 --FPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELA  207 (234)
T ss_dssp             --CSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHH
T ss_pred             --cCcceecCCCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHH
Confidence              88888777764 46788999999999999  99999999999999999999999999876554 3444443

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.95  E-value=8.4e-27  Score=193.09  Aligned_cols=190  Identities=13%  Similarity=0.177  Sum_probs=145.1

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHH-cCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~g~~~~~~~  144 (298)
                      ++|+|+||+||||+++...+..++..+++++|.+....             .+....|.....   .+.. .+++     
T Consensus        28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~~~g~~~~~---~~~~~~~~~-----   86 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLE-------------NLDQFIGPPLHD---TFKEYYKFE-----   86 (240)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGG-------------GGGGGSSSCHHH---HHHHTSCCC-----
T ss_pred             hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHH-------------HHHHHhCccHHH---HHHHHhCCC-----
Confidence            57999999999999999989999999999998772221             122223333221   1211 1221     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                            ....    ..+...+.+.+.... .....++||+.++|+.|+++|++++|+||+....++..++.+ ++..+  
T Consensus        87 ------~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--  152 (240)
T 3sd7_A           87 ------DKKA----KEAVEKYREYFADKG-IFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYF-DIDRY--  152 (240)
T ss_dssp             ------HHHH----HHHHHHHHHHHHHTG-GGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCGGG--
T ss_pred             ------HHHH----HHHHHHHHHHHHHhc-ccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHc-CcHhh--
Confidence                  1111    222233333333321 234579999999999999999999999999999899999998 99988  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecChhhHHHHHHcCCeEEEEcC-CCchhHh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYT-SSTAEQV  290 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~-~~~~~~vgD~~~Di~~a~~aG~~~v~~~~-~~~~~~~  290 (298)
                      |+.++++++.+..||++.+|+.+++++|++ |++|++|||+.+|+++|+.+|+.++++.. ....+++
T Consensus       153 f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~  220 (240)
T 3sd7_A          153 FKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEI  220 (240)
T ss_dssp             CSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHH
T ss_pred             EEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHH
Confidence            999999999999999999999999999999 99999999999999999999999997764 4444554

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.95  E-value=1.9e-26  Score=188.04  Aligned_cols=187  Identities=21%  Similarity=0.388  Sum_probs=140.2

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhH-HHHHHHcCCCCCcccC
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFD  145 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~  145 (298)
                      +|+|+||+||||+|+...+...+.++++++|.....         .   ..+....|...... ..++...+..      
T Consensus         2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~---~~~~~~~g~~~~~~~~~~~~~~~~~------   63 (221)
T 2wf7_A            2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVD---------R---QFNEQLKGVSREDSLQKILDLADKK------   63 (221)
T ss_dssp             CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCS---------H---HHHTTTTTCCHHHHHHHHHHHTTCC------
T ss_pred             CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCC---------H---HHHHHhCCCCHHHHHHHHHHHhCCC------
Confidence            789999999999999988888999999998875111         1   12222344443332 3334444421      


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhc-CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                         ...+..    ..+...+.+.+...+.. ....++||+.++++.|++.|++++++||.  ......++.+ ++..+  
T Consensus        64 ---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~-~l~~~--  131 (221)
T 2wf7_A           64 ---VSAEEF----KELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERM-NLTGY--  131 (221)
T ss_dssp             ---CCHHHH----HHHHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHT-TCGGG--
T ss_pred             ---CChHHH----HHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHc-ChHHH--
Confidence               111222    22233333444444322 13568999999999999999999999998  4467778887 88888  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      |+.++++++.+..||+|++|+.+++++|++|++|++|||+.||++||+.+|+.++++++
T Consensus       132 f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~  190 (221)
T 2wf7_A          132 FDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR  190 (221)
T ss_dssp             CSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred             cceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECC
Confidence            89999999999999999999999999999999999999999999999999999998864

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.95  E-value=1.4e-26  Score=186.48  Aligned_cols=183  Identities=15%  Similarity=0.238  Sum_probs=139.2

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhc-CChhhHHHHHH-HcCCCCCcc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG-GGKPKMRWYFK-EHGWPSSTI  143 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~-~~g~~~~~~  143 (298)
                      ++|+|+||+||||+++...+...+.++++++|+....             ..+....| .+.......+. ..+++    
T Consensus         3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~----   65 (207)
T 2go7_A            3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDK-------------EKVREFIFKYSVQDLLVRVAEDRNLD----   65 (207)
T ss_dssp             -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCH-------------HHHHHHHHHSCHHHHHHHHHHHHTCC----
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHHccccHHHHHHHhhchhhcc----
Confidence            5899999999999999988888899999988764321             23344455 44444433332 11110    


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                                     ..+...+...+.+.+ .....++|++.++++.|+++|++++++||+...... .++.+ ++..+ 
T Consensus        66 ---------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~-~~~~~-  126 (207)
T 2go7_A           66 ---------------VEVLNQVRAQSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDL-GVESY-  126 (207)
T ss_dssp             ---------------HHHHHHHHHHHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHH-TCGGG-
T ss_pred             ---------------HHHHHHHHHHHHHhc-cccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHc-Cchhh-
Confidence                           111112222222221 134568999999999999999999999999988888 88887 88887 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                       |+.++++++.+..||++.+|..+++++|+++++|++|||+.+|++|++.+|+.++++..+.
T Consensus       127 -f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~  187 (207)
T 2go7_A          127 -FTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST  187 (207)
T ss_dssp             -EEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred             -eeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC
Confidence             8999999999999999999999999999999999999999999999999999988766543

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.95  E-value=1.8e-26  Score=189.84  Aligned_cols=188  Identities=15%  Similarity=0.139  Sum_probs=137.6

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHH--------Hh--cCChh---hH-HH
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN--------QI--GGGKP---KM-RW  131 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--g~~~~---~~-~~  131 (298)
                      ++|+|+||+||||+|+...+...+.++++++|.....          .....+..        ..  |.+..   .. ..
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   72 (235)
T 2om6_A            3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKD----------VANAVIEVRNEIKKMRAQASEDPRKVLTGSQEA   72 (235)
T ss_dssp             CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHH----------HHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHH
T ss_pred             CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcH----------HHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHH
Confidence            4899999999999999988888899999888765311          11011111        11  33332   11 12


Q ss_pred             HHHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCC---hhh
Q 022348          132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAAT---KSS  208 (298)
Q Consensus       132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~---~~~  208 (298)
                      +....|+.           ...       ..... ..+....  ....++||+.++|+.|+++|++++++||+.   ...
T Consensus        73 ~~~~~~~~-----------~~~-------~~~~~-~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~  131 (235)
T 2om6_A           73 LAGKLKVD-----------VEL-------VKRAT-ARAILNV--DESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSY  131 (235)
T ss_dssp             HHHHHTCC-----------HHH-------HHHHH-HHHHHHC--CGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHH
T ss_pred             HHHHhCCC-----------HHH-------HHHHH-HHHHHhc--cccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhH
Confidence            22222322           001       11111 1122221  112469999999999999999999999999   888


Q ss_pred             HHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCCch
Q 022348          209 VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA  287 (298)
Q Consensus       209 ~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~~  287 (298)
                      +...++.+ ++..+  |+.++++++++..||+|++|..+++++|++|++|++|||+. ||+++|+.+|+.+++++.+...
T Consensus       132 ~~~~l~~~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~  208 (235)
T 2om6_A          132 TRLLLERF-GLMEF--IDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDK  208 (235)
T ss_dssp             HHHHHHHT-TCGGG--CSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCS
T ss_pred             HHHHHHhC-CcHHH--hhhheeccccCCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCC
Confidence            88888888 99888  89999999999999999999999999999999999999999 9999999999999987765433

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.95  E-value=2.6e-26  Score=187.55  Aligned_cols=196  Identities=17%  Similarity=0.257  Sum_probs=146.4

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      |++|+|+||+||||+++...+...+.++++++|.....            .+.+....|.........+...        
T Consensus         4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~--------   63 (225)
T 3d6j_A            4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGIT------------DDMIKRTIGKTLEESFSILTGI--------   63 (225)
T ss_dssp             -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCC------------HHHHHTTTTSCHHHHHHHHHCC--------
T ss_pred             CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCC------------HHHHHHHhCCcHHHHHHHHcCC--------
Confidence            35899999999999999988888899999998875432            1233334555444333332111        


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                          ....    ....+...+...+...+. ....++|++.++++.|++.|++++++||.....+...++.+ ++..+  
T Consensus        64 ----~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~-~~~~~--  131 (225)
T 3d6j_A           64 ----TDAD----QLESFRQEYSKEADIYMN-ANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNH-MPDDW--  131 (225)
T ss_dssp             ----CCHH----HHHHHHHHHHHHHHHHTG-GGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTS-SCTTC--
T ss_pred             ----CCHH----HHHHHHHHHHHHHHHhcc-ccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHc-Cchhh--
Confidence                0111    122233333334444332 23568999999999999999999999999988888888887 88877  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC-CchhHhhh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS-STAEQVRI  292 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~-~~~~~~~~  292 (298)
                      |+.++++++.+..||++.+|..+++++|++++++++|||+.+|++|++.+|+.++++..+ ...++++.
T Consensus       132 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~  200 (225)
T 3d6j_A          132 FDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQA  200 (225)
T ss_dssp             CSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGG
T ss_pred             eeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhh
Confidence            899999988889999999999999999999999999999999999999999999876554 34444443

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.95  E-value=3.7e-26  Score=186.78  Aligned_cols=190  Identities=23%  Similarity=0.388  Sum_probs=141.4

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHH-HHHHHcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~  144 (298)
                      ++|+|+||+||||+++...+...+.++++++|.......            .+....|....... .++...++.     
T Consensus         8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~------------~~~~~~g~~~~~~~~~~~~~~~~~-----   70 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN------------ELPDTLGLRIDMVVDLWYARQPWN-----   70 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGG------------GSCCCTTCCHHHHHHHHHHHSCCS-----
T ss_pred             CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHH------------HHHHHhCCCHHHHHHHHHHHcCCC-----
Confidence            489999999999999998888889999999887643100            01112333333222 222232221     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                            .....+....+.+.+.+.+..     ...++|++.++++.|++.|++++++||+....+...++.+ ++..+  
T Consensus        71 ------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~~~~~--  136 (226)
T 1te2_A           71 ------GPSRQEVVERVIARAISLVEE-----TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF-DLRDS--  136 (226)
T ss_dssp             ------SSCHHHHHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred             ------ccCHHHHHHHHHHHHHHHHhc-----cCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc-CcHhh--
Confidence                  111222222222222222222     2468999999999999999999999999988888888887 99887  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      |+.++++++.+..||++.+++.+++++|+++++|++|||+.+|++|++.+|+.++++..+.+
T Consensus       137 ~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~  198 (226)
T 1te2_A          137 FDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEA  198 (226)
T ss_dssp             CSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTT
T ss_pred             CcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCC
Confidence            89999999999999999999999999999999999999999999999999999997765543

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.95  E-value=3.9e-26  Score=191.75  Aligned_cols=104  Identities=22%  Similarity=0.400  Sum_probs=96.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      .+.++||+.++|+.|++ +++++|+||+....+...++.+ ++..+  ||.++++++++.+||+|++|..+++++|++|+
T Consensus       119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~-gl~~~--f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~  194 (260)
T 2gfh_A          119 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEAC-ACQSY--FDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPG  194 (260)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHH-TCGGG--CSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGG
T ss_pred             cCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhc-CHHhh--hheEEecCCCCCCCCCHHHHHHHHHHcCCChh
Confidence            45799999999999998 5999999999999889999998 99988  99999999999999999999999999999999


Q ss_pred             cEEEEecC-hhhHHHHHHcCC-eEEEEcCC
Q 022348          257 DCLVVEDS-VIGLQAATRAGM-ACVITYTS  284 (298)
Q Consensus       257 ~~~~vgD~-~~Di~~a~~aG~-~~v~~~~~  284 (298)
                      +|+||||+ .+|+++|+++|+ .++++...
T Consensus       195 ~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~  224 (260)
T 2gfh_A          195 DCVMVGDTLETDIQGGLNAGLKATVWINKS  224 (260)
T ss_dssp             GEEEEESCTTTHHHHHHHTTCSEEEEECTT
T ss_pred             hEEEECCCchhhHHHHHHCCCceEEEEcCC
Confidence            99999995 899999999999 78877654

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.95  E-value=1.6e-26  Score=184.39  Aligned_cols=180  Identities=15%  Similarity=0.215  Sum_probs=134.6

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHh-cCChhhHHHHHHHcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI-GGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      ++|+|+||+||||+|+...+..++.++++++|+....             +.+.... +....   ......+.      
T Consensus         5 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~~~~~~---~~~~~~~~------   62 (190)
T 2fi1_A            5 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDH-------------DSVYQALKVSTPF---AIETFAPN------   62 (190)
T ss_dssp             CCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHHHHCHHH---HHHHHCTT------
T ss_pred             cccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHHHccccHH---HHHHHhhh------
Confidence            5899999999999999988888999999998875422             1222222 22221   12222210      


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                           ...    .    ...+.+.+.+.. ... .++||+.++++.|+++|++++++||... .+...++.+ ++..+  
T Consensus        63 -----~~~----~----~~~~~~~~~~~~-~~~-~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~-~~~~~--  123 (190)
T 2fi1_A           63 -----LEN----F----LEKYKENEAREL-EHP-ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKT-SIAAY--  123 (190)
T ss_dssp             -----CTT----H----HHHHHHHHHHHT-TSC-CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHT-TCGGG--
T ss_pred             -----HHH----H----HHHHHHHHHHhc-CcC-ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHc-CCHhh--
Confidence                 000    1    112222333332 223 3899999999999999999999999864 577888887 89887  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      |+.++++++++..||+|++|+.+++++|++  +|++|||+.+|+++|+.+|+.+++++.+....
T Consensus       124 f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~  185 (190)
T 2fi1_A          124 FTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLR  185 (190)
T ss_dssp             EEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHH
T ss_pred             eeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChh
Confidence            899999999999999999999999999998  99999999999999999999999887654433

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.94  E-value=1.2e-26  Score=195.03  Aligned_cols=103  Identities=18%  Similarity=0.212  Sum_probs=94.2

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHH--hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      ...++||+.++|+.|+++|++++|+||+....++..++.+  .++..+  ||.++++ +++ +||+|++|..+++++|++
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~--fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~  203 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL--VDGHFDT-KIG-HKVESESYRKIADSIGCS  203 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG--CSEEECG-GGC-CTTCHHHHHHHHHHHTSC
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh--ccEEEec-CCC-CCCCHHHHHHHHHHhCcC
Confidence            4679999999999999999999999999998888888754  258888  9999988 888 999999999999999999


Q ss_pred             CCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          255 EKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       255 ~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      |++|+||||+.+|+++|+++|+.+|++..
T Consensus       204 p~~~l~VgDs~~di~aA~~aG~~~i~v~~  232 (261)
T 1yns_A          204 TNNILFLTDVTREASAAEEADVHVAVVVR  232 (261)
T ss_dssp             GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             cccEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence            99999999999999999999999998743

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=7.6e-26  Score=191.54  Aligned_cols=190  Identities=23%  Similarity=0.283  Sum_probs=142.3

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcccC
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD  145 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~  145 (298)
                      ++|+|+||+||||+|+...+...+.+++++++. . .         .  ...+....|.........+....        
T Consensus        34 ~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~-~---------~--~~~~~~~~G~~~~~~~~~~~~~~--------   92 (275)
T 2qlt_A           34 KINAALFDVDGTIIISQPAIAAFWRDFGKDKPY-F-D---------A--EHVIHISHGWRTYDAIAKFAPDF--------   92 (275)
T ss_dssp             EESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-C-C---------H--HHHHHHCTTCCHHHHHHHHCGGG--------
T ss_pred             cCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-C-C---------H--HHHHHHhcCCCHHHHHHHHhccC--------
Confidence            489999999999999998888899999888873 1 0         1  11222234554433332221110        


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHC-CCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~-g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                         ..    .+....+    ...+.+.+ .....++||+.++|+.|++. |++++++||+....+...++.+ ++..   
T Consensus        93 ---~~----~~~~~~~----~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~-~l~~---  156 (275)
T 2qlt_A           93 ---AD----EEYVNKL----EGEIPEKY-GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDIL-KIKR---  156 (275)
T ss_dssp             ---CC----HHHHHHH----HHTHHHHH-CTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHH-TCCC---
T ss_pred             ---Cc----HHHHHHH----HHHHHHHH-hcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHc-CCCc---
Confidence               00    1111222    22222222 23457899999999999999 9999999999998899999988 8763   


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCC-------CCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhhh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGI-------SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI  292 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi-------~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~  292 (298)
                      |+.+++++++...||+|++|..+++++|+       +|++|++|||+.+|+++|+.+|+.++++..+....++..
T Consensus       157 f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~  231 (275)
T 2qlt_A          157 PEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKE  231 (275)
T ss_dssp             CSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTT
T ss_pred             cCEEEEcccCCCCCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhh
Confidence            78899999999999999999999999999       999999999999999999999999998887777666554

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.94  E-value=1.2e-25  Score=184.63  Aligned_cols=108  Identities=23%  Similarity=0.308  Sum_probs=101.0

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      ....++||+.++++.|+++|++++++||+....+...++.+ ++..+  |+.++++++.+..||+|.+|..+++++|++|
T Consensus        93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~  169 (230)
T 3um9_A           93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNS-GLTNS--FDHLISVDEVRLFKPHQKVYELAMDTLHLGE  169 (230)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH-TCGGG--CSEEEEGGGTTCCTTCHHHHHHHHHHHTCCG
T ss_pred             hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHC-CChhh--cceeEehhhcccCCCChHHHHHHHHHhCCCc
Confidence            34679999999999999999999999999999899999998 99988  9999999999999999999999999999999


Q ss_pred             CcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          256 KDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      ++|++|||+.+|+++|+.+|+.+++++.+.+
T Consensus       170 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~  200 (230)
T 3um9_A          170 SEILFVSCNSWDATGAKYFGYPVCWINRSNG  200 (230)
T ss_dssp             GGEEEEESCHHHHHHHHHHTCCEEEECTTSC
T ss_pred             ccEEEEeCCHHHHHHHHHCCCEEEEEeCCCC
Confidence            9999999999999999999999998776544

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.94  E-value=9.4e-26  Score=189.74  Aligned_cols=192  Identities=18%  Similarity=0.241  Sum_probs=139.1

Q ss_pred             CCccEEEEecCCccccchh-HHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHH----------
Q 022348           65 QSLQALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF----------  133 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------  133 (298)
                      +++|+|+||+||||+|+.. .+..++.++++++|+....             +.+....|.........+          
T Consensus         4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~   70 (267)
T 1swv_A            4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITA-------------EEARKPMGLLKIDHVRALTEMPRIASEW   70 (267)
T ss_dssp             -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCH-------------HHHHTTTTSCHHHHHHHHHHSHHHHHHH
T ss_pred             CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCH-------------HHHHHHhccchHHHHHHhcccHHHHHHH
Confidence            3589999999999999987 5678899999998876422             122223333322211111          


Q ss_pred             -HHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHH
Q 022348          134 -KEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC  212 (298)
Q Consensus       134 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~  212 (298)
                       ...+..         ......    ..+...+.+.+...+ .....++||+.++++.|++.|++++++||+....+...
T Consensus        71 ~~~~~~~---------~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~  136 (267)
T 1swv_A           71 NRVFRQL---------PTEADI----QEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIV  136 (267)
T ss_dssp             HHHHSSC---------CCHHHH----HHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHH
T ss_pred             HHHhCCC---------CCHHHH----HHHHHHHHHHHHHhh-ccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHH
Confidence             112211         111111    222223333333332 23356899999999999999999999999998888888


Q ss_pred             HHHHhCCccccCc-ceEEeCCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          213 LENLIGMERFEGL-DCFLAGDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       213 l~~~~~l~~~~~f-d~v~~~~~~~~~KP~~~~~~~~~~~lgi~~-~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      ++.+ ++..+  | +.++++++++..||+|.+|..+++++|+++ ++|++|||+.||++|++.+|+.++++..+..
T Consensus       137 l~~~-~~~~~--~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~  209 (267)
T 1swv_A          137 AKEA-ALQGY--KPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSS  209 (267)
T ss_dssp             HHHH-HHTTC--CCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred             HHHc-CCccc--ChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence            8887 77665  5 888888888999999999999999999999 9999999999999999999999997766544

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.94  E-value=1.7e-27  Score=194.98  Aligned_cols=183  Identities=17%  Similarity=0.243  Sum_probs=126.1

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCCh---------hhHHHHHHHc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK---------PKMRWYFKEH  136 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---------~~~~~~~~~~  136 (298)
                      ++|+|+||+||||+|+...+..++.+++.++|++...         ......+....|...         ..+...+...
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~   72 (220)
T 2zg6_A            2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDL---------RKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYIL   72 (220)
T ss_dssp             CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCH---------HHHHHHHHHHGGGCCC-----CCCCCHHHHHHHH
T ss_pred             CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCH---------HHHHHHHHHHhhhccCCCccccccccHHHHHHHc
Confidence            5899999999999999988888899999998875422         222233332233221         1134444444


Q ss_pred             CCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHH
Q 022348          137 GWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL  216 (298)
Q Consensus       137 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~  216 (298)
                      |...          .   .+..+.    +.+   .+.......++||+.++|+.|+++|++++|+||+... +...++.+
T Consensus        73 ~~~~----------~---~~~~~~----~~~---~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~  131 (220)
T 2zg6_A           73 GIYP----------S---ERLVKE----LKE---ADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKF  131 (220)
T ss_dssp             TCCC----------C---HHHHHH----HHH---TTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHH
T ss_pred             CCCC----------c---HHHHHH----HHH---HhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhc
Confidence            4320          0   111111    111   1111234579999999999999999999999999774 78889988


Q ss_pred             hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh-hHHHHHHcCCeEEEEcCC
Q 022348          217 IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTS  284 (298)
Q Consensus       217 ~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~-Di~~a~~aG~~~v~~~~~  284 (298)
                       |+..+  ||.++++++++..||+|++|..+++++|++|   +||||+.+ |+++|+++|+.++++..+
T Consensus       132 -gl~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~  194 (220)
T 2zg6_A          132 -DLKKY--FDALALSYEIKAVKPNPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRY  194 (220)
T ss_dssp             -TCGGG--CSEEC-----------CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTT
T ss_pred             -CcHhH--eeEEEeccccCCCCCCHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCC
Confidence             99988  9999999999999999999999999999988   99999998 999999999999987654

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.94  E-value=3.6e-26  Score=184.04  Aligned_cols=112  Identities=21%  Similarity=0.366  Sum_probs=100.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|+++| +++|+||+....+...++.+ ++..+  |+.++++++++..||+|++|..+++++|++|++
T Consensus        85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~-~~~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  160 (200)
T 3cnh_A           85 SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTF-GLGEF--LLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEE  160 (200)
T ss_dssp             CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHH-TGGGT--CSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhC-CHHHh--cceEEeecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            359999999999999999 99999999999899999998 99888  899999998899999999999999999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEcCCCc-hhHhhhc
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITYTSST-AEQVRII  293 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~~~~~-~~~~~~~  293 (298)
                      |++|||+.+|+++|+.+|+.++++..+.. .+++...
T Consensus       161 ~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~~~  197 (200)
T 3cnh_A          161 AVMVDDRLQNVQAARAVGMHAVQCVDAAQLREELAAL  197 (200)
T ss_dssp             EEEEESCHHHHHHHHHTTCEEEECSCHHHHHHHHHHT
T ss_pred             eEEeCCCHHHHHHHHHCCCEEEEECCchhhHHHHHHh
Confidence            99999999999999999999997766544 4445443

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.94  E-value=4e-26  Score=187.86  Aligned_cols=106  Identities=18%  Similarity=0.289  Sum_probs=99.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|+++|++++++||+....+...++.+ ++..+  |+.++++++.+..||+|.+|..+++++|++|++
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  174 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSA-GMSGL--FDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQ  174 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTT-TCTTT--CSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGG
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHC-CcHhh--cCEEEEecccCCCCcCHHHHHHHHHHhCCCccc
Confidence            578999999999999999999999999999899999888 99888  999999999999999999999999999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      |++|||+.+|+++|+.+|+.++++..+.+
T Consensus       175 ~~~vGD~~~Di~~a~~~G~~~~~v~~~~~  203 (233)
T 3umb_A          175 ILFVSSNGWDACGATWHGFTTFWINRLGH  203 (233)
T ss_dssp             EEEEESCHHHHHHHHHHTCEEEEECTTCC
T ss_pred             EEEEeCCHHHHHHHHHcCCEEEEEcCCCC
Confidence            99999999999999999999998765443

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.94  E-value=6.9e-26  Score=183.22  Aligned_cols=106  Identities=21%  Similarity=0.357  Sum_probs=96.7

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc--ceEEeCCCCCCCCCCHHHHHHHHHHhCC
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--DCFLAGDDVKQKKPDPSIYVTAAKRLGI  253 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f--d~v~~~~~~~~~KP~~~~~~~~~~~lgi  253 (298)
                      ....++||+.++|+.|+++|++++++||+....+...++.+ ++..+  |  +.+++++. +.+||+|.+|+.+++++|+
T Consensus        67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~  142 (205)
T 3m9l_A           67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAI-GLADC--FAEADVLGRDE-APPKPHPGGLLKLAEAWDV  142 (205)
T ss_dssp             EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG--SCGGGEECTTT-SCCTTSSHHHHHHHHHTTC
T ss_pred             hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHc-Cchhh--cCcceEEeCCC-CCCCCCHHHHHHHHHHcCC
Confidence            34579999999999999999999999999999999999998 99988  7  77887665 8899999999999999999


Q ss_pred             CCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          254 SEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       254 ~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      ++++|++|||+.+|+++|+.+|+.+|++..+.
T Consensus       143 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~  174 (205)
T 3m9l_A          143 SPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPD  174 (205)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEECSSSS
T ss_pred             CHHHEEEECCCHHHHHHHHHcCCEEEEEeCCC
Confidence            99999999999999999999999988776554

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.94  E-value=1.3e-25  Score=184.86  Aligned_cols=107  Identities=17%  Similarity=0.246  Sum_probs=96.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHH------HHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL------ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG  252 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l------~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lg  252 (298)
                      .++||+.++|+.|+++ ++++|+||+....+...+      +.+ ++..+  ||.++++++++..||+|++|+.+++++|
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~-~l~~~--fd~i~~~~~~~~~KP~~~~~~~~~~~~g  187 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTF-KVEDY--FEKTYLSYEMKMAKPEPEIFKAVTEDAG  187 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTB-CHHHH--CSEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccC-CHHHh--CCEEEeecccCCCCCCHHHHHHHHHHcC
Confidence            5789999999999999 999999999998877555      444 77777  8999999999999999999999999999


Q ss_pred             CCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          253 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       253 i~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      ++|++|++|||+.+|+++|+++|+.+++++++...++
T Consensus       188 ~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~  224 (229)
T 4dcc_A          188 IDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSH  224 (229)
T ss_dssp             CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGG
T ss_pred             CCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence            9999999999999999999999999998877655443

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.94  E-value=7.4e-26  Score=183.62  Aligned_cols=110  Identities=15%  Similarity=0.253  Sum_probs=97.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHH------HhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHh
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN------LIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL  251 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~------~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l  251 (298)
                      ..++||+.++|+.|++ |++++++||+....+...++.      + ++..+  |+.++++++++..||+|++|..+++++
T Consensus        88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~-~l~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~  163 (211)
T 2i6x_A           88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGR-TLDSF--FDKVYASCQMGKYKPNEDIFLEMIADS  163 (211)
T ss_dssp             EEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCC-CGGGG--SSEEEEHHHHTCCTTSHHHHHHHHHHH
T ss_pred             cccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhcccccc-CHHHH--cCeEEeecccCCCCCCHHHHHHHHHHh
Confidence            4689999999999999 999999999998888878877      5 88877  899999999999999999999999999


Q ss_pred             CCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc-hhHhh
Q 022348          252 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSST-AEQVR  291 (298)
Q Consensus       252 gi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~-~~~~~  291 (298)
                      |++|++|++|||+.+|+++|+.+|+.+++++.+.. .+.++
T Consensus       164 ~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~  204 (211)
T 2i6x_A          164 GMKPEETLFIDDGPANVATAERLGFHTYCPDNGENWIPAIT  204 (211)
T ss_dssp             CCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCCHHHHH
T ss_pred             CCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHHHHHHH
Confidence            99999999999999999999999999997766543 33343

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.94  E-value=7.4e-26  Score=188.71  Aligned_cols=179  Identities=20%  Similarity=0.246  Sum_probs=133.3

Q ss_pred             CcCCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhH-------------
Q 022348           63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-------------  129 (298)
Q Consensus        63 ~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------------  129 (298)
                      ..+++|+|+||+||||+++...+..++.++++++|+....         ......   ..+......             
T Consensus        18 ~~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~   85 (254)
T 3umc_A           18 YFQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPC---------VELTDR---WRQQYKPAMDRVRNGQAPWQHL   85 (254)
T ss_dssp             CSSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCH---------HHHHHH---HHHHTHHHHHHHHTTSSCCCCH
T ss_pred             cccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCH---------HHHHHH---HHHHHHHHHHHHhcccCCcccH
Confidence            3457999999999999999988889999999999876432         111111   111111111             


Q ss_pred             --------HHHHHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEE
Q 022348          130 --------RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVC  201 (298)
Q Consensus       130 --------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~  201 (298)
                              ..++..++...         ..            .....+...  .....++||+.++|+.|++. ++++++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~---------~~------------~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~  141 (254)
T 3umc_A           86 DQLHRQSLEALAGEFGLAL---------DE------------ALLQRITGF--WHRLRPWPDTLAGMHALKAD-YWLAAL  141 (254)
T ss_dssp             HHHHHHHHHHHHHHTTCCC---------CH------------HHHHHHHGG--GGSCEECTTHHHHHHHHTTT-SEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCCC---------CH------------HHHHHHHHH--HhcCCCCccHHHHHHHHHhc-CeEEEE
Confidence                    11122222110         00            000111111  13457899999999999986 999999


Q ss_pred             eCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          202 SAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       202 S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      ||+....+...++.+ ++.    |+.++++++++.+||+|.+|+.+++++|++|++|++|||+.+|++||+.+|+.++++
T Consensus       142 s~~~~~~~~~~l~~~-g~~----f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~  216 (254)
T 3umc_A          142 SNGNTALMLDVARHA-GLP----WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFI  216 (254)
T ss_dssp             CSSCHHHHHHHHHHH-TCC----CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred             eCCCHHHHHHHHHHc-CCC----cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEE
Confidence            999998888899888 774    799999988999999999999999999999999999999999999999999999988


Q ss_pred             c
Q 022348          282 Y  282 (298)
Q Consensus       282 ~  282 (298)
                      +
T Consensus       217 ~  217 (254)
T 3umc_A          217 A  217 (254)
T ss_dssp             C
T ss_pred             e
Confidence            6

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.94  E-value=5.8e-26  Score=187.27  Aligned_cols=182  Identities=21%  Similarity=0.272  Sum_probs=133.5

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHh--------cCCh-----hhHHH
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI--------GGGK-----PKMRW  131 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~~~-----~~~~~  131 (298)
                      +++|+|+||+||||+|+...+..++.++++++|+....         ......+....        +...     ..+..
T Consensus         4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (240)
T 3smv_A            4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTS---------DELLEVFGRNESPQQTETPGALYQDILRAVYDR   74 (240)
T ss_dssp             GGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCH---------HHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHH
T ss_pred             ccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCH---------HHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHH
Confidence            46899999999999999988889999999998876432         11111111110        0001     11223


Q ss_pred             HHHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHH
Q 022348          132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL  211 (298)
Q Consensus       132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~  211 (298)
                      .+.+.+++.          ..       ..    ...+....  ....++||+.++|+.|++ |++++++||+....+..
T Consensus        75 ~~~~~~~~~----------~~-------~~----~~~~~~~~--~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~  130 (240)
T 3smv_A           75 IAKEWGLEP----------DA-------AE----REEFGTSV--KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKL  130 (240)
T ss_dssp             HHHHTTCCC----------CH-------HH----HHHHHTGG--GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHH
T ss_pred             HHHHhCCCC----------CH-------HH----HHHHHHHH--hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHH
Confidence            333444320          00       00    11122221  235799999999999999 79999999999887877


Q ss_pred             HHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHH---HHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCC
Q 022348          212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA---AKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTS  284 (298)
Q Consensus       212 ~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~---~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~  284 (298)
                      .++.   +..+  ||.++++++++..||+|.+|..+   ++++|++|++|++|||+. +|+++|+.+|+.+++++..
T Consensus       131 ~l~~---l~~~--fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~  202 (240)
T 3smv_A          131 SNAK---LGVE--FDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRR  202 (240)
T ss_dssp             HHTT---TCSC--CSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTT
T ss_pred             HHHh---cCCc--cCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCC
Confidence            7765   4455  89999999999999999999999   899999999999999997 9999999999999988765

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.94  E-value=2.3e-25  Score=182.71  Aligned_cols=185  Identities=23%  Similarity=0.379  Sum_probs=139.4

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHH-HHHcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWY-FKEHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~g~~~~~~~  144 (298)
                      ++|+|+||+||||+++...+...+.++++++|.....            .+.+....|......... +...+...    
T Consensus         3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~----   66 (229)
T 2fdr_A            3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISV------------EEMGERFAGMTWKNILLQVESEASIPL----   66 (229)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCH------------HHHHHHHTTCCHHHHHHHHHHHHCCCC----
T ss_pred             CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCH------------HHHHHHHhCCCHHHHHHHHHHHcCCCC----
Confidence            5899999999999999988888899999998875421            112333455554444333 33334321    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                           ...    ....+.+.+.+.+..     ...++||+.++++.|+.   +++++||+....+...++.+ ++..+  
T Consensus        67 -----~~~----~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~-~l~~~--  126 (229)
T 2fdr_A           67 -----SAS----LLDKSEKLLDMRLER-----DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKV-GLKPY--  126 (229)
T ss_dssp             -----CTH----HHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred             -----CHH----HHHHHHHHHHHHhhc-----CCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhC-ChHHh--
Confidence                 111    112222222222222     24689999999998874   89999999998888999988 99888  


Q ss_pred             c-ceEEeCCCCCCC--CCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          225 L-DCFLAGDDVKQK--KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       225 f-d~v~~~~~~~~~--KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      | +.++++++++.+  ||++.+|+.+++++|++|++|++|||+.+|+++|+.+|+.++++..+..
T Consensus       127 ~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~  191 (229)
T 2fdr_A          127 FAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASH  191 (229)
T ss_dssp             TTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTT
T ss_pred             ccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCc
Confidence            8 899998888888  9999999999999999999999999999999999999999887766544

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.93  E-value=2.8e-25  Score=182.83  Aligned_cols=105  Identities=24%  Similarity=0.314  Sum_probs=98.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|+++|++++++||+....+...++.+ ++..+  |+.++++++.+..||+|.+|..+++++|++|++
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  170 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA-GLRDG--FDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA  170 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhc-ChHhh--hheEEEecccCCCCCCHHHHHHHHHHcCCCccc
Confidence            578999999999999999999999999998889999988 99888  999999999999999999999999999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      |++|||+.+|+++|+.+|+.++++..+.
T Consensus       171 ~~~iGD~~~Di~~a~~aG~~~~~~~~~~  198 (232)
T 1zrn_A          171 ILFVASNAWDATGARYFGFPTCWINRTG  198 (232)
T ss_dssp             EEEEESCHHHHHHHHHHTCCEEEECTTC
T ss_pred             EEEEeCCHHHHHHHHHcCCEEEEEcCCC
Confidence            9999999999999999999999876543

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.93  E-value=2.2e-25  Score=183.46  Aligned_cols=110  Identities=18%  Similarity=0.340  Sum_probs=101.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|+++ ++++++||+....+...++.+ ++..+  |+.++++++.+..||+|.+|+.+++++|++|++
T Consensus        99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~-~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  174 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDAL-GIKDL--FDSITTSEEAGFFKPHPRIFELALKKAGVKGEE  174 (234)
T ss_dssp             CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGG
T ss_pred             CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHc-CcHHH--cceeEeccccCCCCcCHHHHHHHHHHcCCCchh
Confidence            47899999999999999 999999999999899999988 99988  999999999999999999999999999999999


Q ss_pred             EEEEecCh-hhHHHHHHcCCeEEEEcCCCchhHhh
Q 022348          258 CLVVEDSV-IGLQAATRAGMACVITYTSSTAEQVR  291 (298)
Q Consensus       258 ~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~~~~~~  291 (298)
                      |++|||+. ||+++|+.+|+.++++..+....+..
T Consensus       175 ~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~  209 (234)
T 3u26_A          175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFW  209 (234)
T ss_dssp             EEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGG
T ss_pred             EEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccc
Confidence            99999998 99999999999999887776555443

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.93  E-value=2.2e-25  Score=185.44  Aligned_cols=180  Identities=18%  Similarity=0.281  Sum_probs=132.6

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhh----------------
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK----------------  128 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----------------  128 (298)
                      +++|+|+||+||||+++...+...+.++++++|+....         ..   .+....+.....                
T Consensus        13 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (254)
T 3umg_A           13 RNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDA---------VA---FADRWRARYQPSMDAILSGAREFVTLDI   80 (254)
T ss_dssp             SBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCH---------HH---HHHHHHTTHHHHHHHHHTTSSCCCCHHH
T ss_pred             CCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCH---------HH---HHHHHHHhHHHHHHHHHhcCCCCCCHHH
Confidence            46999999999999999988889999999999875432         11   111122211111                


Q ss_pred             -----HHHHHHHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeC
Q 022348          129 -----MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSA  203 (298)
Q Consensus       129 -----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~  203 (298)
                           +..++...+.+..      ...            ....+.+...  .....++||+.++|+.|++. ++++++||
T Consensus        81 ~~~~~~~~~~~~~~~~~~------~~~------------~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~t~  139 (254)
T 3umg_A           81 LHRENLDFVLRESGIDPT------NHD------------SGELDELARA--WHVLTPWPDSVPGLTAIKAE-YIIGPLSN  139 (254)
T ss_dssp             HHHHHHHHHHHHTTCCGG------GSC------------HHHHHHHHGG--GGSCCBCTTHHHHHHHHHHH-SEEEECSS
T ss_pred             HHHHHHHHHHHHhCCCcC------cCC------------HHHHHHHHHH--HhhCcCCcCHHHHHHHHHhC-CeEEEEeC
Confidence                 1112222221000      000            0000111111  13457899999999999997 99999999


Q ss_pred             CChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          204 ATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       204 ~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      +....+...++.+ ++.    |+.++++++++..||+|.+|+.+++++|++|++|++|||+.+|+++|+.+|+.+++++
T Consensus       140 ~~~~~~~~~l~~~-~~~----f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~  213 (254)
T 3umg_A          140 GNTSLLLDMAKNA-GIP----WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFIL  213 (254)
T ss_dssp             SCHHHHHHHHHHH-TCC----CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred             CCHHHHHHHHHhC-CCC----eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEe
Confidence            9999898999988 774    7888888888999999999999999999999999999999999999999999999886

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.93  E-value=6.7e-25  Score=181.68  Aligned_cols=106  Identities=28%  Similarity=0.431  Sum_probs=99.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|+++|++++++||+....+...++.+ ++..+  |+.++++++++..||+|.+|..+++++|++|++
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  180 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKAS-KLDRV--LDSCLSADDLKIYKPDPRIYQFACDRLGVNPNE  180 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGG
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhc-CcHHH--cCEEEEccccCCCCCCHHHHHHHHHHcCCCccc
Confidence            579999999999999999999999999999899999988 99988  999999999999999999999999999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      |++|||+.+|+++|+.+|+.++++..+..
T Consensus       181 ~~~iGD~~~Di~~a~~aG~~~~~v~~~~~  209 (240)
T 2no4_A          181 VCFVSSNAWDLGGAGKFGFNTVRINRQGN  209 (240)
T ss_dssp             EEEEESCHHHHHHHHHHTCEEEEECTTCC
T ss_pred             EEEEeCCHHHHHHHHHCCCEEEEECCCCC
Confidence            99999999999999999999998765543

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.93  E-value=8.4e-25  Score=185.63  Aligned_cols=185  Identities=19%  Similarity=0.261  Sum_probs=129.8

Q ss_pred             cCCccEEEEecCCccccchhHHHHHHHHHHhhc-----CCCCCCCccccCCCChHHHHHHHHH-hcCChhhHHHHHHHcC
Q 022348           64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHF-----NVRCDPSSQQSLNWDPEFYDVLQNQ-IGGGKPKMRWYFKEHG  137 (298)
Q Consensus        64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~g  137 (298)
                      ..++|+|+||+||||+++...+...+..++.++     ++..            .....+... .......+...+...+
T Consensus        54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~g~~~~~~~~~~~  121 (282)
T 3nuq_A           54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSP------------EDAHVLNNSYYKEYGLAIRGLVMFHK  121 (282)
T ss_dssp             -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCH------------HHHHHHHHHHHHHTHHHHHHHHHTTS
T ss_pred             CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCH------------HHHHHHHHHHHHHHhhhHHHHHHHcC
Confidence            347899999999999999877777777766653     3321            111111110 0000111222333333


Q ss_pred             CCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHH-hcCCCCCChhHHHHHHHHHHCCC--eEEEEeCCChhhHHHHHH
Q 022348          138 WPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII-KSGTVEPRPGVLRLMDEAKAAGK--KVAVCSAATKSSVILCLE  214 (298)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pg~~~~l~~L~~~g~--~i~i~S~~~~~~~~~~l~  214 (298)
                      +.              .    ..+.    +.+.... ......++||+.++|+.|+++|+  +++|+||+....+...++
T Consensus       122 ~~--------------~----~~~~----~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~  179 (282)
T 3nuq_A          122 VN--------------A----LEYN----RLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLR  179 (282)
T ss_dssp             SC--------------H----HHHH----HHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHH
T ss_pred             CC--------------H----HHHH----HHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHH
Confidence            21              0    1111    1111110 02236789999999999999999  999999999999999999


Q ss_pred             HHhCCccccCcceEEeCCCC----CCCCCCHHHHHHHHHHhCCCC-CcEEEEecChhhHHHHHHcCCe-EEEEcCCC
Q 022348          215 NLIGMERFEGLDCFLAGDDV----KQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMA-CVITYTSS  285 (298)
Q Consensus       215 ~~~~l~~~~~fd~v~~~~~~----~~~KP~~~~~~~~~~~lgi~~-~~~~~vgD~~~Di~~a~~aG~~-~v~~~~~~  285 (298)
                      .+ ++..+  |+.++++++.    ..+||+|.+|+.+++++|++| ++|++|||+.+|++||+.+|++ ++++....
T Consensus       180 ~~-gl~~~--fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~  253 (282)
T 3nuq_A          180 LL-GIADL--FDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENE  253 (282)
T ss_dssp             HH-TCTTS--CSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCC
T ss_pred             hC-Ccccc--cceEEEeccCCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCc
Confidence            98 99988  9999988764    567999999999999999999 9999999999999999999995 44555544

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.93  E-value=3.4e-25  Score=181.97  Aligned_cols=191  Identities=16%  Similarity=0.217  Sum_probs=131.1

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhc----CCh---h-----hHHHHH
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG----GGK---P-----KMRWYF  133 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~---~-----~~~~~~  133 (298)
                      ++|+|+||+||||+++...+..++..+++.++.......    ......+..+...+.    ...   .     .....+
T Consensus         1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (230)
T 3vay_A            1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLG----PVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHAL   76 (230)
T ss_dssp             CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTC----SCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH
T ss_pred             CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcch----hhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHH
Confidence            479999999999999987776666655554332211100    011222323222211    000   0     112233


Q ss_pred             HHcCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHH
Q 022348          134 KEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL  213 (298)
Q Consensus       134 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l  213 (298)
                      ...|++           .+...++.    +...+.+...  .....++||+.++|+.|+++ ++++++||+...     +
T Consensus        77 ~~~~~~-----------~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l  133 (230)
T 3vay_A           77 EDAGYD-----------SDEAQQLA----DESFEVFLHG--RHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----V  133 (230)
T ss_dssp             HTTTCC-----------HHHHHHHH----HHHHHHHHHH--HTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----G
T ss_pred             HHhCCC-----------hhhhHHHH----HHHHHHHHHh--hccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----h
Confidence            333332           22222222    2222333333  23568999999999999999 999999999875     4


Q ss_pred             HHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCCc
Q 022348          214 ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       214 ~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      +.+ ++..+  |+.++++++.+.+||+|.+|+.+++++|++|++|++|||+. +|+++|+.+|+.++++..+..
T Consensus       134 ~~~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~  204 (230)
T 3vay_A          134 RRL-GLADY--FAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGK  204 (230)
T ss_dssp             GGS-TTGGG--CSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCC
T ss_pred             hhc-CcHHH--eeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCC
Confidence            555 88888  99999999999999999999999999999999999999998 999999999999998766554

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.93  E-value=3.3e-24  Score=175.90  Aligned_cols=187  Identities=19%  Similarity=0.203  Sum_probs=129.9

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHH-------HHHhcCChhhHHHHHHHcCCC
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVL-------QNQIGGGKPKMRWYFKEHGWP  139 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~g~~  139 (298)
                      +|+|+||+||||+++...+..++..+++.+......         ......+       ....|.+.......+.+....
T Consensus         8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (234)
T 3ddh_A            8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTS---------KEISAALFQTEMNNLQILGYGAKAFTISMVETALQ   78 (234)
T ss_dssp             CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCH---------HHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHH
T ss_pred             ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCH---------HHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHH
Confidence            899999999999999988777777666554432211         1111111       133444443322111111000


Q ss_pred             CCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCC-CeEEEEeCCChhhHHHHHHHHhC
Q 022348          140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIG  218 (298)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g-~~i~i~S~~~~~~~~~~l~~~~~  218 (298)
                         .. ......+.    ...+.    +.+.+.+ .....++||+.++++.|+++| ++++++||+....+...++.+ +
T Consensus        79 ---~~-~~~~~~~~----~~~~~----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~-~  144 (234)
T 3ddh_A           79 ---IS-NGKIAADI----IRQIV----DLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERS-G  144 (234)
T ss_dssp             ---HT-TTCCCHHH----HHHHH----HHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHH-T
T ss_pred             ---Hh-cCCCCHHH----HHHHH----HHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHh-C
Confidence               00 00111111    12222    2233332 245679999999999999999 999999999998888999998 9


Q ss_pred             CccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcC
Q 022348          219 MERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYT  283 (298)
Q Consensus       219 l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~  283 (298)
                      +..+  |+.++++     .||+|.+|+.+++++|++|++|++|||+. +|+++|+.+|+.++++..
T Consensus       145 ~~~~--f~~~~~~-----~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~  203 (234)
T 3ddh_A          145 LSPY--FDHIEVM-----SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPF  203 (234)
T ss_dssp             CGGG--CSEEEEE-----SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCC
T ss_pred             cHhh--hheeeec-----CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecC
Confidence            9888  8888864     58999999999999999999999999997 999999999999998743

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.93  E-value=1.7e-25  Score=180.74  Aligned_cols=108  Identities=21%  Similarity=0.381  Sum_probs=96.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHH-HhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN-LIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~-~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      ..++||+.++|+.|+++|++++++||+....+...++. + ++..+  |+.++++++.+..||+|++|..+++++|++++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~-~l~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~  166 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP-EIRDA--ADHIYLSQDLGMRKPEARIYQHVLQAEGFSPS  166 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCH-HHHHH--CSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhcc-Chhhh--eeeEEEecccCCCCCCHHHHHHHHHHcCCCHH
Confidence            57899999999999999999999999987766655555 4 77777  89999999889999999999999999999999


Q ss_pred             cEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          257 DCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      +|++|||+.+|+++|+.+|+.+++++.+....
T Consensus       167 ~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~  198 (206)
T 2b0c_A          167 DTVFFDDNADNIEGANQLGITSILVKDKTTIP  198 (206)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECCSTTHHH
T ss_pred             HeEEeCCCHHHHHHHHHcCCeEEEecCCchHH
Confidence            99999999999999999999999887765543

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.93  E-value=5.4e-24  Score=177.44  Aligned_cols=187  Identities=17%  Similarity=0.144  Sum_probs=133.8

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHh---hcCCCCCCCccccCCCChHHH-HHHH--HHhcCChhhHHHHHHH----
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFS---HFNVRCDPSSQQSLNWDPEFY-DVLQ--NQIGGGKPKMRWYFKE----  135 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~g~~~~~~~~~~~~----  135 (298)
                      ++|+|+||+||||+|+...+..++.++++   ++|+....      .....+. ..+.  ...|.+...+...+.+    
T Consensus        12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   85 (251)
T 2pke_A           12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDS------RMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIE   85 (251)
T ss_dssp             SCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----------CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHH
T ss_pred             ceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhH------HHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHH
Confidence            58999999999999999888888887774   55654310      0001111 1111  2456666555444322    


Q ss_pred             -cCCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHH
Q 022348          136 -HGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE  214 (298)
Q Consensus       136 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~  214 (298)
                       .+..         ..    .+....    +.+.+.+.+ .....++||+.++|+.|+ +|++++++||+....+...++
T Consensus        86 ~~~~~---------~~----~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~  146 (251)
T 2pke_A           86 LTEAR---------IE----ARDIQR----IVEIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIE  146 (251)
T ss_dssp             HTTTC---------CC----HHHHHH----HHHHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHH
T ss_pred             hcCCC---------CC----hHHHHH----HHHHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHH
Confidence             1211         00    111112    222233332 245679999999999999 999999999999888888999


Q ss_pred             HHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCC
Q 022348          215 NLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       215 ~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~  285 (298)
                      .+ ++..+  |+.++++     .||+|++|..+++++|++|++|++|||+. +|+++|+.+|+.++++..+.
T Consensus       147 ~~-~l~~~--f~~i~~~-----~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~  210 (251)
T 2pke_A          147 QS-GLSDL--FPRIEVV-----SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAV  210 (251)
T ss_dssp             HH-SGGGT--CCCEEEE-----SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-
T ss_pred             Hc-CcHHh--Cceeeee-----CCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCC
Confidence            88 99888  8888763     58999999999999999999999999999 99999999999999875543

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.92  E-value=4.3e-24  Score=178.08  Aligned_cols=100  Identities=16%  Similarity=0.307  Sum_probs=84.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHH--h--------CCccccCcceEEeCCCCCCCCCCHHHHHH
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--I--------GMERFEGLDCFLAGDDVKQKKPDPSIYVT  246 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~--~--------~l~~~~~fd~v~~~~~~~~~KP~~~~~~~  246 (298)
                      ...++||+.++|+.    |++++|+||+....++..++.+  .        ++..+  |+.++.+ .+...||+|++|..
T Consensus       123 ~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~--~~~~f~~-~~~g~KP~p~~~~~  195 (253)
T 2g80_A          123 KAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY--IDGYFDI-NTSGKKTETQSYAN  195 (253)
T ss_dssp             CBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG--CCEEECH-HHHCCTTCHHHHHH
T ss_pred             cCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh--cceEEee-eccCCCCCHHHHHH
Confidence            45789999999988    8999999999999888888764  2        45555  6666644 23125999999999


Q ss_pred             HHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       247 ~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      +++++|++|++|+||||+.+|+++|+++||.++++..
T Consensus       196 a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~  232 (253)
T 2g80_A          196 ILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR  232 (253)
T ss_dssp             HHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred             HHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence            9999999999999999999999999999999997744

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.92  E-value=2.5e-25  Score=179.34  Aligned_cols=101  Identities=21%  Similarity=0.360  Sum_probs=94.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.+ |+.|+++ ++++|+||+....+...++.+ ++..+  |+.++++++.+..||+|++|..+++++|  |++
T Consensus        73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~-~l~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~  145 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERN-GLLRY--FKGIFSAESVKEYKPSPKVYKYFLDSIG--AKE  145 (201)
T ss_dssp             CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSC
T ss_pred             cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHC-CcHHh--CcEEEehhhcCCCCCCHHHHHHHHHhcC--CCc
Confidence            579999999 9999999 999999999988889999988 99988  8999999999999999999999999999  999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      |++|||+.+|+++|+.+|+.++++..+.
T Consensus       146 ~~~vGD~~~Di~~a~~aG~~~~~~~~~~  173 (201)
T 2w43_A          146 AFLVSSNAFDVIGAKNAGMRSIFVNRKN  173 (201)
T ss_dssp             CEEEESCHHHHHHHHHTTCEEEEECSSS
T ss_pred             EEEEeCCHHHhHHHHHCCCEEEEECCCC
Confidence            9999999999999999999999776543

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.92  E-value=3.6e-24  Score=178.84  Aligned_cols=101  Identities=20%  Similarity=0.304  Sum_probs=96.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|+  |++++|+||+....+...++.+ ++..+  |+.++++++++..||+|.+|..+++++|++|++
T Consensus        92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~-gl~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  166 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANA-GLTDS--FDAVISVDAKRVFKPHPDSYALVEEVLGVTPAE  166 (253)
T ss_dssp             CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGG
T ss_pred             CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHC-Cchhh--ccEEEEccccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            578999999999999  8999999999999899999998 99988  999999999999999999999999999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      |++|||+.+|+++|+.+|+.+++++.
T Consensus       167 ~~~vGD~~~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          167 VLFVSSNGFDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             EEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred             EEEEeCChhhHHHHHHCCCEEEEECC
Confidence            99999999999999999999998876

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.91  E-value=1.2e-24  Score=177.13  Aligned_cols=100  Identities=18%  Similarity=0.168  Sum_probs=91.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEe----------CCCCCCCCCCHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA----------GDDVKQKKPDPSIYVTA  247 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~----------~~~~~~~KP~~~~~~~~  247 (298)
                      ..++||+.++|+.|+++|++++++||+....++..++.+ ++..+  |+.++.          +++...+||+|.+|+.+
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-gl~~~--f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~  150 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLL-HLDAA--FSNTLIVENDALNGLVTGHMMFSHSKGEMLLVL  150 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEEEETTEEEEEEEESCCSTTHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHc-Ccchh--ccceeEEeCCEEEeeeccCCCCCCChHHHHHHH
Confidence            579999999999999999999999999999999999998 99988  888763          33466789999999999


Q ss_pred             HHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       248 ~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ++++|++|++|++|||+.+|+++|+.+|+.+++
T Consensus       151 ~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~  183 (217)
T 3m1y_A          151 QRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF  183 (217)
T ss_dssp             HHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred             HHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence            999999999999999999999999999999876

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.91  E-value=1e-23  Score=194.21  Aligned_cols=106  Identities=18%  Similarity=0.256  Sum_probs=91.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC------ChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHh
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAA------TKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL  251 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~------~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l  251 (298)
                      ..++||+.++|+.|+++|++++|+||+      ....+...+   .++..+  ||.++++++++..||+|++|..+++++
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~---~~l~~~--fd~i~~~~~~~~~KP~p~~~~~~~~~l  173 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM---CELKMH--FDFLIESCQVGMVKPEPQIYKFLLDTL  173 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH---HHHHTT--SSEEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh---hhhhhh--eeEEEeccccCCCCCCHHHHHHHHHHc
Confidence            479999999999999999999999998      222222222   366777  999999999999999999999999999


Q ss_pred             CCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          252 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       252 gi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      |++|++|+||||+.+|+++|+++|+.++++.++....
T Consensus       174 g~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~~~  210 (555)
T 3i28_A          174 KASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTAL  210 (555)
T ss_dssp             TCCGGGEEEEESCHHHHHHHHHHTCEEEECSSHHHHH
T ss_pred             CCChhHEEEECCcHHHHHHHHHcCCEEEEECCCccHH
Confidence            9999999999999999999999999999887765433

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.91  E-value=1.8e-23  Score=167.81  Aligned_cols=99  Identities=16%  Similarity=0.196  Sum_probs=87.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC-C
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE-K  256 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~-~  256 (298)
                      ..++||+.++|+.|+++|++++|+||.....+   ++.+ +  .+  ||.++++++++..||+|++|..+++++|+.+ +
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~---~~~~-~--~~--~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~  106 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALS---TPLA-A--PV--NDWMIAAPRPTAGWPQPDACWMALMALNVSQLE  106 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH---HHHH-T--TT--TTTCEECCCCSSCTTSTHHHHHHHHHTTCSCST
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH---HHhc-C--cc--CCEEEECCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence            46899999999999999999999999887755   3333 4  34  7999999999999999999999999999975 8


Q ss_pred             cEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          257 DCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +|+||||+.+|+++|+++|+.+|++..+
T Consensus       107 ~~v~VGDs~~Di~aA~~aG~~~i~v~~g  134 (196)
T 2oda_A          107 GCVLISGDPRLLQSGLNAGLWTIGLASC  134 (196)
T ss_dssp             TCEEEESCHHHHHHHHHHTCEEEEESSS
T ss_pred             cEEEEeCCHHHHHHHHHCCCEEEEEccC
Confidence            9999999999999999999999976544

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.91  E-value=1.1e-23  Score=168.40  Aligned_cols=106  Identities=23%  Similarity=0.354  Sum_probs=98.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCCh---hhHHHHHHHHhCCccccCcceEEeCCCC----CCCCCCHHHHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---SSVILCLENLIGMERFEGLDCFLAGDDV----KQKKPDPSIYVTAAKR  250 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~---~~~~~~l~~~~~l~~~~~fd~v~~~~~~----~~~KP~~~~~~~~~~~  250 (298)
                      ..++||+.++|+.|+++|++++|+||+..   ..+...++.+ |+..+  ||.++++++.    +..||+|++|+.++++
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~-gl~~~--fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~  109 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNF-GIIDY--FDFIYASNSELQPGKMEKPDKTIFDFTLNA  109 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHT-TCGGG--EEEEEECCTTSSTTCCCTTSHHHHHHHHHH
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhc-Cchhh--eEEEEEccccccccCCCCcCHHHHHHHHHH
Confidence            47999999999999999999999999987   7788899998 99988  9999999886    7889999999999999


Q ss_pred             hCCCCCcEEEEecC-hhhHHHHHHcCCeEEEEcCCCc
Q 022348          251 LGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       251 lgi~~~~~~~vgD~-~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      +|++|++|+||||+ .+|+++|+++|+.++++..+..
T Consensus       110 ~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~  146 (189)
T 3ib6_A          110 LQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEV  146 (189)
T ss_dssp             HTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTT
T ss_pred             cCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccc
Confidence            99999999999999 6999999999999998876654

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.90  E-value=2.3e-23  Score=179.23  Aligned_cols=100  Identities=18%  Similarity=0.190  Sum_probs=90.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEe----------CCCCCCCCCCHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA----------GDDVKQKKPDPSIYVTA  247 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~----------~~~~~~~KP~~~~~~~~  247 (298)
                      +.++||+.++|+.|+++|++++|+||+....++..++.+ |+..+  |+.++.          +.++..+||+|++|..+
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~l-gl~~~--f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~  254 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARY-QLDYA--FSNTVEIRDNVLTDNITLPIMNAANKKQTLVDL  254 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCSEE--EEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHc-CCCeE--EEEEEEeeCCeeeeeEecccCCCCCCHHHHHHH
Confidence            579999999999999999999999999999999999998 99888  776654          33345679999999999


Q ss_pred             HHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       248 ~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ++++|++|++|+||||+.+|+.+|+.+|+.+++
T Consensus       255 ~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          255 AARLNIATENIIACGDGANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999999998766

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.89  E-value=8.6e-24  Score=174.24  Aligned_cols=182  Identities=13%  Similarity=0.142  Sum_probs=123.0

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      .++|+|+||+||||+|+...+..+|.++++++|++....       .....+.+....|...  +...+..++..    .
T Consensus         9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~~g~~~--~~~~~~~~~~~----~   75 (231)
T 2p11_A            9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSAR-------YWEIFETLRTELGYAD--YLGALQRYRLE----Q   75 (231)
T ss_dssp             CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHH-------HHHHHHHHHHHC-CCC--HHHHHHHHHHH----C
T ss_pred             CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchH-------HHHHHHHHHHhcCchH--HHHHHHHHHhc----c
Confidence            368999999999999999999999999999988642110       0001223333344331  11122111100    0


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                         . .+..        .+.+.+.+....  ....++||+.++|+.|+++| +++|+||+....+...++.+ |+..+  
T Consensus        76 ---~-~~~~--------~~~~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~-gl~~~--  137 (231)
T 2p11_A           76 ---P-RDTR--------LLLMSSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARS-GLWDE--  137 (231)
T ss_dssp             ---T-TCTG--------GGGGHHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHT-THHHH--
T ss_pred             ---c-cchH--------HHHHHHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHc-CcHHh--
Confidence               0 0000        011122222221  23579999999999999999 99999999999999999998 99887  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh---hHHHHHHcCCeEEEEcCC
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI---GLQAATRAGMACVITYTS  284 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~---Di~~a~~aG~~~v~~~~~  284 (298)
                      |+.++..   +  +++|.++..+++  |++|++|+||||+.+   |+++|+++|+.++++..+
T Consensus       138 f~~~~~~---~--~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g  193 (231)
T 2p11_A          138 VEGRVLI---Y--IHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQG  193 (231)
T ss_dssp             TTTCEEE---E--SSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCS
T ss_pred             cCeeEEe---c--CChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCC
Confidence            7765432   2  334667777776  789999999999999   999999999999976554

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.89  E-value=2.9e-23  Score=170.22  Aligned_cols=102  Identities=17%  Similarity=0.168  Sum_probs=85.3

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc--ccCcceEE--------eCCCCCC----CCCCH
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER--FEGLDCFL--------AGDDVKQ----KKPDP  241 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~--~~~fd~v~--------~~~~~~~----~KP~~  241 (298)
                      ....++||+.++|+.|+++|++++|+||+....++..++.+ ++..  +  |+.++        .+.+...    .||+|
T Consensus        83 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp  159 (225)
T 1nnl_A           83 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKL-NIPATNV--FANRLKFYFNGEYAGFDETQPTAESGGKG  159 (225)
T ss_dssp             SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCCGGGE--EEECEEECTTSCEEEECTTSGGGSTTHHH
T ss_pred             ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHc-CCCcccE--EeeeEEEcCCCcEecCCCCCcccCCCchH
Confidence            34679999999999999999999999999999999999998 8873  5  55543        3443332    46788


Q ss_pred             HHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       242 ~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      ++|..+++++|+  ++|+||||+.+|+++|+++|+ +|.+..
T Consensus       160 ~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~  198 (225)
T 1nnl_A          160 KVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGG  198 (225)
T ss_dssp             HHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECS
T ss_pred             HHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecC
Confidence            999999999998  789999999999999999999 665543

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.89  E-value=2.8e-23  Score=164.45  Aligned_cols=107  Identities=24%  Similarity=0.334  Sum_probs=90.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCCh---------------hhHHHHHHHHhCCccccCcceEE-----eCCCCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFL-----AGDDVKQK  237 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~---------------~~~~~~l~~~~~l~~~~~fd~v~-----~~~~~~~~  237 (298)
                      +.++||+.++|+.|+++|++++|+||+..               ..+...++.+ +  .+  |+.++     .+++.+..
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g--~~--~~~~~~~~~~~~~~~~~~  100 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQM-G--GV--VDAIFMCPHGPDDGCACR  100 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHT-T--CC--CCEEEEECCCTTSCCSSS
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhC-C--Cc--eeEEEEcCCCCCCCCCCC
Confidence            46899999999999999999999999986               4556677776 6  22  45554     25778899


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      ||+|++|+.+++++|++|++|+||||+.+|+++|+++|+.++++..+....+
T Consensus       101 KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~  152 (179)
T 3l8h_A          101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKT  152 (179)
T ss_dssp             TTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHH
T ss_pred             CCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchh
Confidence            9999999999999999999999999999999999999999998766655443

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.88  E-value=7.6e-22  Score=162.37  Aligned_cols=103  Identities=11%  Similarity=0.035  Sum_probs=86.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEe-------CC---CCCCCCCCHHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA-------GD---DVKQKKPDPSIYVTAA  248 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~-------~~---~~~~~KP~~~~~~~~~  248 (298)
                      .++||+.++|+.|+++|++++|+||+....++..++.+ |+..+  |...+.       +.   ....+++++..++.++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~-g~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~  168 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAF-GVQHL--IATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWL  168 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCCEE--EECEEEEETTEEEEEEESSCSSTHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCCEE--EEcceEEECCEEeeeecCCCCcchHHHHHHHHHH
Confidence            57999999999999999999999999999999999998 88766  433222       11   2334567788999999


Q ss_pred             HHhC---CCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          249 KRLG---ISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       249 ~~lg---i~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +++|   ++|++|++|||+.+|+.+++.+|+.+++..+.
T Consensus       169 ~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~  207 (232)
T 3fvv_A          169 AGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSP  207 (232)
T ss_dssp             HHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCH
T ss_pred             HHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCH
Confidence            9999   99999999999999999999999998764443

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.88  E-value=6.4e-23  Score=154.83  Aligned_cols=104  Identities=20%  Similarity=0.322  Sum_probs=95.5

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL  259 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~  259 (298)
                      ++||+.++|+.|+++|++++|+||+....+...++.+ ++..+  |+.++++++.+..||+|++|+.+++++|++|++|+
T Consensus        19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~   95 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL-ETNGV--VDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCV   95 (137)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHH-HHTTS--SSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHC-ChHhh--ccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            5578899999999999999999999988888889888 88887  89999998888999999999999999999999999


Q ss_pred             EEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          260 VVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       260 ~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      ||||+.+|+++|+++|+.++++..+..
T Consensus        96 ~vgD~~~di~~a~~~G~~~i~~~~~~~  122 (137)
T 2pr7_A           96 LVDDSILNVRGAVEAGLVGVYYQQFDR  122 (137)
T ss_dssp             EEESCHHHHHHHHHHTCEEEECSCHHH
T ss_pred             EEcCCHHHHHHHHHCCCEEEEeCChHH
Confidence            999999999999999999997766443

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.87  E-value=5.7e-22  Score=160.23  Aligned_cols=100  Identities=13%  Similarity=0.092  Sum_probs=87.7

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc-ceEEeCCCCCC---CCCCHHHHHHHHHHhC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLAGDDVKQ---KKPDPSIYVTAAKRLG  252 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f-d~v~~~~~~~~---~KP~~~~~~~~~~~lg  252 (298)
                      ...++||+.++|+.|+++ ++++|+||+....+...++.+ |+..+  | +.++.+++...   .||+|..|..+++++|
T Consensus        67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~-gl~~~--f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~  142 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQL-GFPTL--LCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK  142 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHT-TCCCE--EEEEEEECTTSCEEEEECCSSSHHHHHHHHHH
T ss_pred             hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHc-CCcce--ecceeEEcCCceEEeeecCCCchHHHHHHHHH
Confidence            467899999999999999 999999999999899999998 99887  7 56666655431   2488899999999999


Q ss_pred             CCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          253 ISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       253 i~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      +.|++|+||||+.+|+++|+.+|+.+++
T Consensus       143 ~~~~~~~~iGD~~~Di~~a~~aG~~~~~  170 (206)
T 1rku_A          143 SLYYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             HTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             hcCCEEEEEeCChhhHHHHHhcCccEEE
Confidence            9999999999999999999999999664

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.87  E-value=3.4e-22  Score=178.71  Aligned_cols=100  Identities=17%  Similarity=0.227  Sum_probs=89.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceE-------EeC---CCCCCCCCCHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF-------LAG---DDVKQKKPDPSIYVTA  247 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v-------~~~---~~~~~~KP~~~~~~~~  247 (298)
                      +.++||+.++|+.|+++|++++|+||+....++..++.+ |+..+  |+..       +++   +++..+||++++|+.+
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~l-gl~~~--~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~  331 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEEL-MLDYV--AANELEIVDGTLTGRVVGPIIDRAGKATALREF  331 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCSEE--EEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc-Cccce--eeeeEEEeCCEEEeeEccCCCCCcchHHHHHHH
Confidence            479999999999999999999999999999999999998 99876  4432       222   3455689999999999


Q ss_pred             HHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       248 ~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ++++|++|++|+||||+.+|+.+++.+|+.+++
T Consensus       332 ~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~  364 (415)
T 3p96_A          332 AQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF  364 (415)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence            999999999999999999999999999999776

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.87  E-value=7.6e-24  Score=175.62  Aligned_cols=192  Identities=13%  Similarity=0.155  Sum_probs=126.8

Q ss_pred             CccEEEEecCCccccchhHHHHH--HHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQA--YNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI  143 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~  143 (298)
                      ++|+|+||+||||+++...+..+  +.+.+++.|+.....+.               ..|.....+...+...|+...  
T Consensus         2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t~---------------~~g~~~~~~~~~~~~~g~~~~--   64 (250)
T 2c4n_A            2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTN---------------YPSQTGQDLANRFATAGVDVP--   64 (250)
T ss_dssp             CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEES---------------CCSCCHHHHHHHHHHTTCCCC--
T ss_pred             CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEEC---------------CCCCCHHHHHHHHHHcCCCCC--
Confidence            58999999999999987554444  55666677876433111               124444455555555554310  


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEE------------------------
Q 022348          144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVA------------------------  199 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~------------------------  199 (298)
                            .+.....  ....    ..+.+.+ .....++||+.++++.|++.|++++                        
T Consensus        65 ------~~~~~~~--~~~~----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (250)
T 2c4n_A           65 ------DSVFYTS--AMAT----ADFLRRQ-EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAA  131 (250)
T ss_dssp             ------GGGEEEH--HHHH----HHHHHTS-SCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHH
T ss_pred             ------HHHeEcH--HHHH----HHHHHhc-CCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHH
Confidence                  0000000  0000    1111111 2335678999999999999999999                        


Q ss_pred             ---------EEeCCChhhHHHHHHHHhC-CccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-hhhH
Q 022348          200 ---------VCSAATKSSVILCLENLIG-MERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGL  268 (298)
Q Consensus       200 ---------i~S~~~~~~~~~~l~~~~~-l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~-~~Di  268 (298)
                               ++||.. ......++.+ + +..+  |+.+.+.+.+..+||++.+|+.+++++|+++++|++|||+ .||+
T Consensus       132 ~~~~~~~~~i~t~~~-~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi  207 (250)
T 2c4n_A          132 YFVANGARFIATNPD-THGRGFYPAC-GALCAG--IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDI  207 (250)
T ss_dssp             HHHHTTCEEEESCCC-SBSSTTCBCH-HHHHHH--HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHH
T ss_pred             HHHHCCCEEEEECCC-CCCCCeeecc-hHHHHH--HHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHH
Confidence                     888876 3333333333 2 3333  5666666777889999999999999999999999999999 6999


Q ss_pred             HHHHHcCCeEEEEcCCCc-hhHhh
Q 022348          269 QAATRAGMACVITYTSST-AEQVR  291 (298)
Q Consensus       269 ~~a~~aG~~~v~~~~~~~-~~~~~  291 (298)
                      +|++.+|+.++++..+.. .++++
T Consensus       208 ~~~~~aG~~~~~v~~g~~~~~~~~  231 (250)
T 2c4n_A          208 LAGFQAGLETILVLSGVSSLDDID  231 (250)
T ss_dssp             HHHHHTTCEEEEESSSSCCGGGGS
T ss_pred             HHHHHcCCeEEEECCCCCChhhhh
Confidence            999999999997765543 34554

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.85  E-value=1.3e-22  Score=169.81  Aligned_cols=101  Identities=12%  Similarity=0.120  Sum_probs=84.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcc---eEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD---CFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd---~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      .++|++.++++.|+ .|+++ ++||.........+..+ ++..+  |+   .++++++++.+||+|.+|+.+++++|++|
T Consensus       122 ~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~  196 (259)
T 2ho4_A          122 FHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLAL-GPGPF--VTALEYATDTKAMVVGKPEKTFFLEALRDADCAP  196 (259)
T ss_dssp             CBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEE-CSHHH--HHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCG
T ss_pred             CCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCccc-CCcHH--HHHHHHHhCCCceEecCCCHHHHHHHHHHcCCCh
Confidence            37899999999999 89999 99998765444444443 66665  55   55667778889999999999999999999


Q ss_pred             CcEEEEecCh-hhHHHHHHcCCeEEEEcCC
Q 022348          256 KDCLVVEDSV-IGLQAATRAGMACVITYTS  284 (298)
Q Consensus       256 ~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~  284 (298)
                      ++|++|||+. +|+++|+++|+.++++..+
T Consensus       197 ~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g  226 (259)
T 2ho4_A          197 EEAVMIGDDCRDDVDGAQNIGMLGILVKTG  226 (259)
T ss_dssp             GGEEEEESCTTTTHHHHHHTTCEEEEESST
T ss_pred             HHEEEECCCcHHHHHHHHHCCCcEEEECCC
Confidence            9999999999 9999999999999977654

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.85  E-value=7.8e-21  Score=154.40  Aligned_cols=103  Identities=24%  Similarity=0.302  Sum_probs=89.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCC---------------hhhHHHHHHHHhCCccccCcceEEe------------
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFLA------------  230 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~---------------~~~~~~~l~~~~~l~~~~~fd~v~~------------  230 (298)
                      ..++||+.++|++|+++|++++|+||+.               ...+...++.+ ++.    |+.++.            
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----f~~~~~~~~~~~~~~~~~  123 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR-DVD----LDGIYYCPHHPQGSVEEF  123 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT-TCC----CSEEEEECCBTTCSSGGG
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHc-CCc----eEEEEECCcCCCCccccc
Confidence            3689999999999999999999999999               36677888887 775    465543            


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeE-EEEcCCC
Q 022348          231 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSS  285 (298)
Q Consensus       231 ~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~-v~~~~~~  285 (298)
                      +++.+.+||+|.+|..+++++|++|++|+||||+.+|+++|+++|+.+ +++..+.
T Consensus       124 ~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~  179 (211)
T 2gmw_A          124 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGK  179 (211)
T ss_dssp             BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSS
T ss_pred             CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCC
Confidence            245678999999999999999999999999999999999999999999 8775543

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.85  E-value=3.5e-22  Score=167.83  Aligned_cols=109  Identities=16%  Similarity=0.153  Sum_probs=86.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhh--HHH-HHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--VIL-CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~--~~~-~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      ..++||+.++++.|+ +|+++ |+||.....  ... .++. .++..+  |+.++++++.+.+||+|.+|+.+++++|++
T Consensus       125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~--f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~  199 (264)
T 1yv9_A          125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGA-GSVVTF--VETATQTKPVYIGKPKAIIMERAIAHLGVE  199 (264)
T ss_dssp             TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECH-HHHHHH--HHHHHTCCCEECSTTSHHHHHHHHHHHCSC
T ss_pred             CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCC-cHHHHH--HHHHhCCCccccCCCCHHHHHHHHHHcCCC
Confidence            458899999999997 89987 999987642  111 1111 145555  788888888888999999999999999999


Q ss_pred             CCcEEEEecCh-hhHHHHHHcCCeEEEEcCCCc-hhHhh
Q 022348          255 EKDCLVVEDSV-IGLQAATRAGMACVITYTSST-AEQVR  291 (298)
Q Consensus       255 ~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~-~~~~~  291 (298)
                      |++|+||||++ +|+++|+++|+.++++..+.. .+++.
T Consensus       200 ~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~  238 (264)
T 1yv9_A          200 KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVP  238 (264)
T ss_dssp             GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTT
T ss_pred             HHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHH
Confidence            99999999994 999999999999997765443 33443

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.85  E-value=1.7e-21  Score=153.69  Aligned_cols=104  Identities=16%  Similarity=0.266  Sum_probs=88.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC---------------ChhhHHHHHHHHhCCccccCcceEEeC-----CCCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAA---------------TKSSVILCLENLIGMERFEGLDCFLAG-----DDVKQK  237 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~---------------~~~~~~~~l~~~~~l~~~~~fd~v~~~-----~~~~~~  237 (298)
                      ..++||+.++|+.|+++|++++|+||+               ....+...++.+ ++.    ||.++.+     ++.+..
T Consensus        41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----fd~v~~s~~~~~~~~~~~  115 (176)
T 2fpr_A           41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQ-GVQ----FDEVLICPHLPADECDCR  115 (176)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHT-TCC----EEEEEEECCCGGGCCSSS
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHc-CCC----eeEEEEcCCCCccccccc
Confidence            468999999999999999999999998               466677888887 775    6877654     788899


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      ||+|++|+.+++++|++|++|+||||+.+|+++|+++|+.++++.....
T Consensus       116 KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~~  164 (176)
T 2fpr_A          116 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETL  164 (176)
T ss_dssp             TTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTB
T ss_pred             CCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCcc
Confidence            9999999999999999999999999999999999999999998776643

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.85  E-value=9.3e-20  Score=159.62  Aligned_cols=105  Identities=25%  Similarity=0.423  Sum_probs=96.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcc--eEEeCCCCC-----------CCCCCHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD--CFLAGDDVK-----------QKKPDPSIY  244 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd--~v~~~~~~~-----------~~KP~~~~~  244 (298)
                      ..++||+.++|+.|+++|++++|+||+....+...++.+ |+..+  ||  .+++++++.           .+||+|++|
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~l-gL~~~--Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~  290 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL-GLLPY--FEADFIATASDVLEAENMYPQARPLGKPNPFSY  290 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCGGG--SCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc-CChHh--cCCCEEEecccccccccccccccCCCCCCHHHH
Confidence            468999999999999999999999999999999999998 99988  88  888887654           489999999


Q ss_pred             HHHHHHhC--------------CCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          245 VTAAKRLG--------------ISEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       245 ~~~~~~lg--------------i~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      ..+++++|              +.|++|+||||+.+|+++|+++||.+|++..+.
T Consensus       291 ~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~  345 (384)
T 1qyi_A          291 IAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL  345 (384)
T ss_dssp             HHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBT
T ss_pred             HHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCc
Confidence            99999999              899999999999999999999999999776543

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.85  E-value=6e-21  Score=165.94  Aligned_cols=101  Identities=21%  Similarity=0.208  Sum_probs=89.8

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEE-------e---CCCCCCCCCCHHHHHH
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFL-------A---GDDVKQKKPDPSIYVT  246 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~-------~---~~~~~~~KP~~~~~~~  246 (298)
                      ...++||+.++++.|++.|++++++||+....++..++.+ ++..+  |+..+       +   .+++..+||+|++|..
T Consensus       176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~l-gl~~~--~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~  252 (335)
T 3n28_A          176 TLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQL-SLDYA--QSNTLEIVSGKLTGQVLGEVVSAQTKADILLT  252 (335)
T ss_dssp             TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEEEETTEEEEEEESCCCCHHHHHHHHHH
T ss_pred             hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc-CCCeE--EeeeeEeeCCeeeeeecccccChhhhHHHHHH
Confidence            3579999999999999999999999999999999999998 99876  55432       1   2356678999999999


Q ss_pred             HHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       247 ~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      +++++|+++++|++|||+.||+.|++.+|+.+++
T Consensus       253 ~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~  286 (335)
T 3n28_A          253 LAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY  286 (335)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence            9999999999999999999999999999999777

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.85  E-value=1.8e-20  Score=151.41  Aligned_cols=100  Identities=26%  Similarity=0.296  Sum_probs=82.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCC----------CCCCCCCHHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD----------VKQKKPDPSIYVTA  247 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~----------~~~~KP~~~~~~~~  247 (298)
                      ..++|++.++|+.|+++|++++++|++....+...++.+ ++..+  |+..+...+          ....++++..+..+
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~  151 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL-GLDYA--FANRLIVKDGKLTGDVEGEVLKENAKGEILEKI  151 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc-CCCeE--EEeeeEEECCEEcCCcccCccCCccHHHHHHHH
Confidence            357899999999999999999999999888777888887 88765  544332211          12346678999999


Q ss_pred             HHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       248 ~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ++++|+++++|++|||+.||++|++.+|+.+++
T Consensus       152 ~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~  184 (211)
T 1l7m_A          152 AKIEGINLEDTVAVGDGANDISMFKKAGLKIAF  184 (211)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEE
T ss_pred             HHHcCCCHHHEEEEecChhHHHHHHHCCCEEEE
Confidence            999999999999999999999999999998543

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.84  E-value=1.8e-20  Score=149.32  Aligned_cols=106  Identities=13%  Similarity=0.177  Sum_probs=93.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCC-hhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT-KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~-~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      ..++||+.++|+.|+++|++++|+||+. ...+...++.+ ++..+  |+.++..     .+|+|..|..+++++|++|+
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~-gl~~~--f~~~~~~-----~~~k~~~~~~~~~~~~~~~~  138 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELF-DLFRY--FVHREIY-----PGSKITHFERLQQKTGIPFS  138 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHT-TCTTT--EEEEEES-----SSCHHHHHHHHHHHHCCCGG
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHc-CcHhh--cceeEEE-----eCchHHHHHHHHHHcCCChH
Confidence            4689999999999999999999999998 68889999998 99888  8877543     36789999999999999999


Q ss_pred             cEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhh
Q 022348          257 DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR  291 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~  291 (298)
                      +|+||||+.+|+++|+++|+.++++..+...+++.
T Consensus       139 ~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~~~~~  173 (187)
T 2wm8_A          139 QMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLS  173 (187)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECSSSCCHHHHH
T ss_pred             HEEEEeCCccChHHHHHcCCEEEEECCCCChHHHH
Confidence            99999999999999999999999887766655543

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.84  E-value=9.9e-21  Score=153.60  Aligned_cols=101  Identities=15%  Similarity=0.199  Sum_probs=78.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc--cccCcceEEeCCC----CCCCCCCHHHHHHHH-HH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME--RFEGLDCFLAGDD----VKQKKPDPSIYVTAA-KR  250 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~--~~~~fd~v~~~~~----~~~~KP~~~~~~~~~-~~  250 (298)
                      ..++||+.++++.|+++|++++|+||+....++..++.+ ++.  .+...+.++..+.    +...||++..+...+ +.
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  159 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYL-NIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA  159 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHc-CCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence            358899999999999999999999999999999999998 884  3411123333332    245777776555555 55


Q ss_pred             hCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          251 LGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       251 lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      +|+++++|++|||+.+|++|+ ++|+.+++
T Consensus       160 ~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~  188 (219)
T 3kd3_A          160 KGLIDGEVIAIGDGYTDYQLY-EKGYATKF  188 (219)
T ss_dssp             GGGCCSEEEEEESSHHHHHHH-HHTSCSEE
T ss_pred             hCCCCCCEEEEECCHhHHHHH-hCCCCcEE
Confidence            699999999999999999999 58998653

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.83  E-value=3.9e-21  Score=158.86  Aligned_cols=96  Identities=16%  Similarity=0.122  Sum_probs=82.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCC--------CCCCHH-HHH---
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ--------KKPDPS-IYV---  245 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~--------~KP~~~-~~~---  245 (298)
                      ..++||+.++|+.|+++|++++|+||+....++..++   ++..   ++.++++++...        +||+|. ++.   
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~---~l~~---~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~  149 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE---GIVE---KDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG  149 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT---TTSC---GGGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh---cCCC---CCeEEeeeeEEcCCceEEecCCCCccccccccC
Confidence            5799999999999999999999999999887777775   4433   477887765443        789888 454   


Q ss_pred             ----HHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEE
Q 022348          246 ----TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       246 ----~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                          .+++++|++|++|+||||+.+|+.+|+++|+.++
T Consensus       150 ~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~  187 (236)
T 2fea_A          150 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA  187 (236)
T ss_dssp             SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred             CcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeee
Confidence                8899999999999999999999999999999986

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.82  E-value=2.6e-22  Score=160.83  Aligned_cols=158  Identities=16%  Similarity=0.229  Sum_probs=111.5

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCC-CccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcccC
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDP-SSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD  145 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~  145 (298)
                      .++|+||+||||+|+...+..+|.++++  |.+... +....+.     .              ...+... ++      
T Consensus         2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~~~-----~--------------~~~~~~~-~~------   53 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRGFL-----A--------------REQYRAL-RP------   53 (193)
T ss_dssp             CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCSSC-----H--------------HHHHHHH-CT------
T ss_pred             CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHHhh-----H--------------HHHHHHH-hH------
Confidence            4799999999999999999899988776  554211 1111110     0              0111111 00      


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHC-CCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~-g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                            +        +.+.+.+.|.+........++||+.++|+.|+++ |++++|+||+....+...++.+ ++     
T Consensus        54 ------~--------~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~-gl-----  113 (193)
T 2i7d_A           54 ------D--------LADKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKY-RW-----  113 (193)
T ss_dssp             ------T--------HHHHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHH-HH-----
T ss_pred             ------H--------HHHHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHh-Cc-----
Confidence                  0        1112222333221123467999999999999999 9999999999988888888887 66     


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhh----HHHHH-HcCCeEEEEcCCCc
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG----LQAAT-RAGMACVITYTSST  286 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~D----i~~a~-~aG~~~v~~~~~~~  286 (298)
                      ||.++++              .+++++|++|++|+||||+.+|    +.+|+ ++||.+|++..+.+
T Consensus       114 f~~i~~~--------------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~  166 (193)
T 2i7d_A          114 VEQHLGP--------------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHN  166 (193)
T ss_dssp             HHHHHCH--------------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGG
T ss_pred             hhhhcCH--------------HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceEEEEeccC
Confidence            4666543              2788999999999999999998    99999 99999998876544

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.82  E-value=7.2e-21  Score=154.42  Aligned_cols=98  Identities=14%  Similarity=0.092  Sum_probs=78.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCC---CCCCCCCCHHHHHHHHHHhCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD---DVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~---~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      .++||+.++|+.|+++|++++|+||+........++.+   ..+  |+.++.+.   ..+..||+|++|..+++++|+  
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l---~~~--f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~--  160 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTL---ADN--FHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI--  160 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHH---HHH--TTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE--
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH---HHh--cCccccccchhhhcCCCCCHHHHHHHHHHCCC--
Confidence            36789999999999999999999999866555555542   344  55543221   244589999999999999998  


Q ss_pred             CcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          256 KDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                        |+||||+.+|+++|+++|+.++++..+.
T Consensus       161 --~l~VGDs~~Di~aA~~aG~~~i~v~~g~  188 (211)
T 2b82_A          161 --RIFYGDSDNDITAARDVGARGIRILRAS  188 (211)
T ss_dssp             --EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred             --EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence              9999999999999999999999765543

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.82  E-value=9e-21  Score=159.79  Aligned_cols=109  Identities=12%  Similarity=0.179  Sum_probs=84.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHH---HHHHHhCCccccCcceEEeCCC-CCCCCCCHHHHHHHHHHhCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLIGMERFEGLDCFLAGDD-VKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~---~l~~~~~l~~~~~fd~v~~~~~-~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      .++|++.++++.| +.|+++ ++||........   .++.. ++..+  |+.++++++ ++.+||++.+|+.+++++|++
T Consensus       137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~-~l~~~--~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~  211 (271)
T 1vjr_A          137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAG-SIMAA--IEASTGRKPDLIAGKPNPLVVDVISEKFGVP  211 (271)
T ss_dssp             CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHH-HHHHH--HHHHHSCCCSEECSTTSTHHHHHHHHHHTCC
T ss_pred             cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCcccccc-HHHHH--HHHHhCCCCcccCCCCCHHHHHHHHHHhCCC
Confidence            4678999999999 789998 999876542211   11222 34444  676667777 788999999999999999999


Q ss_pred             CCcEEEEecCh-hhHHHHHHcCCeEEEEcCC-CchhHhhh
Q 022348          255 EKDCLVVEDSV-IGLQAATRAGMACVITYTS-STAEQVRI  292 (298)
Q Consensus       255 ~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~-~~~~~~~~  292 (298)
                      |++|++|||+. +|++||+.+|+.++++..+ ...+++..
T Consensus       212 ~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~  251 (271)
T 1vjr_A          212 KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLER  251 (271)
T ss_dssp             GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHH
T ss_pred             CceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhh
Confidence            99999999995 9999999999999977554 44444543

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.81  E-value=1.5e-21  Score=156.87  Aligned_cols=160  Identities=13%  Similarity=0.151  Sum_probs=113.3

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcccC
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD  145 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~  145 (298)
                      ++++|+|||||||+|+...+..+|.++++++. ....+...                +.+   ....+....        
T Consensus         3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~-~~~~~~~~----------------~~~---~~~~~~~~~--------   54 (197)
T 1q92_A            3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQP-FIALEDRR----------------GFW---VSEQYGRLR--------   54 (197)
T ss_dssp             CCEEEEECSBTTTBCHHHHHHHHHHHHCTTSC-CCCGGGCC----------------SSC---HHHHHHHHS--------
T ss_pred             CceEEEEeCCCCCccCcHHHHHHHHHHHhcCC-CCCHHHhc----------------CCc---HHHHHHhcC--------
Confidence            57899999999999999999999999888762 11111100                111   111111110        


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHC-CCeEEEEeCCChhhHHHHHHHHhCCcc-cc
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMER-FE  223 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~-g~~i~i~S~~~~~~~~~~l~~~~~l~~-~~  223 (298)
                           .+..    +.+.    +.|.+........++||+.++|+.|+++ |++++|+||+....+...++.+ ++.. + 
T Consensus        55 -----~~~~----~~~~----~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~-~l~~~~-  119 (197)
T 1q92_A           55 -----PGLS----EKAI----SIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKY-AWVEKY-  119 (197)
T ss_dssp             -----TTHH----HHHH----HHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHH-HHHHHH-
T ss_pred             -----HHHH----HHHH----HHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHh-chHHHh-
Confidence                 0111    1111    1222111123467999999999999999 9999999999988888888887 8776 7 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhh----HHHHH-HcCCeEEEEcCCCch
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG----LQAAT-RAGMACVITYTSSTA  287 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~D----i~~a~-~aG~~~v~~~~~~~~  287 (298)
                       |+                  ..+++++|+.|++|++|||+..|    +++|+ ++|+.+|++..+.+.
T Consensus       120 -f~------------------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~  169 (197)
T 1q92_A          120 -FG------------------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQ  169 (197)
T ss_dssp             -HC------------------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTT
T ss_pred             -ch------------------HHHHHHhccCCccEEEECcccccCCchhhhcccCCCceEEEecCcccc
Confidence             64                  45778899999999999999998    99999 999999988765443

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.80  E-value=2.8e-19  Score=145.93  Aligned_cols=104  Identities=30%  Similarity=0.445  Sum_probs=89.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCCh---------------hhHHHHHHHHhCCccccCcceEE-eC----------
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFL-AG----------  231 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~---------------~~~~~~l~~~~~l~~~~~fd~v~-~~----------  231 (298)
                      ..++||+.++|+.|+++|++++|+||+..               ..+...++.+ ++.    |+.++ +.          
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----~~~~~~~~~~~~g~~~~~  129 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE-GVF----VDMVLACAYHEAGVGPLA  129 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT-TCC----CSEEEEECCCTTCCSTTC
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHc-CCc----eeeEEEeecCCCCceeec
Confidence            36899999999999999999999999987               6777888887 764    44433 33          


Q ss_pred             -CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeE-EEEcCCCc
Q 022348          232 -DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSST  286 (298)
Q Consensus       232 -~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~-v~~~~~~~  286 (298)
                       ++...+||+|.+|+.+++++|++|++|+||||+.+|+++|+++|+.+ +++..+..
T Consensus       130 ~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~  186 (218)
T 2o2x_A          130 IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAA  186 (218)
T ss_dssp             CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCE
T ss_pred             ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCC
Confidence             56778999999999999999999999999999999999999999999 87765543

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.79  E-value=5.4e-20  Score=143.08  Aligned_cols=92  Identities=15%  Similarity=0.214  Sum_probs=80.3

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL  259 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~  259 (298)
                      +.|+..++|+.|+++|++++|+||+....+...++.+ ++..+  |+.         .||++.+|..+++++|++|++|+
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~--~~~---------~kp~~~~~~~~~~~~~~~~~~~~  104 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKEL-GVEEI--YTG---------SYKKLEIYEKIKEKYSLKDEEIG  104 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHT-TCCEE--EEC---------C--CHHHHHHHHHHTTCCGGGEE
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc-CCHhh--ccC---------CCCCHHHHHHHHHHcCCCHHHEE
Confidence            4567789999999999999999999999999999988 88766  542         69999999999999999999999


Q ss_pred             EEecChhhHHHHHHcCCeEEEEcC
Q 022348          260 VVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       260 ~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      ||||+.+|+++|+.+|+.+++.++
T Consensus       105 ~vGD~~~Di~~a~~ag~~~~~~~~  128 (162)
T 2p9j_A          105 FIGDDVVDIEVMKKVGFPVAVRNA  128 (162)
T ss_dssp             EEECSGGGHHHHHHSSEEEECTTS
T ss_pred             EECCCHHHHHHHHHCCCeEEecCc
Confidence            999999999999999999775544

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.79  E-value=6.9e-20  Score=146.79  Aligned_cols=102  Identities=18%  Similarity=0.113  Sum_probs=81.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC-CCCCCHHHHHHHHHHhCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK-QKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~-~~KP~~~~~~~~~~~lgi~~  255 (298)
                      ...++||+.++|+.|+++|++++++||+....+... +.+ ++..+  ++.+...+... ..+|.+..+..+++++  ++
T Consensus        77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~  150 (201)
T 4ap9_A           77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KEL-GDEFM--ANRAIFEDGKFQGIRLRFRDKGEFLKRF--RD  150 (201)
T ss_dssp             GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTT-SSEEE--EEEEEEETTEEEEEECCSSCHHHHHGGG--TT
T ss_pred             hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHc-Cchhh--eeeEEeeCCceECCcCCccCHHHHHHhc--Cc
Confidence            357999999999999999999999999988877777 776 88876  66665544322 2456665666777777  89


Q ss_pred             CcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          256 KDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      ++|++|||+.+|+++++.+|+.+++.++.
T Consensus       151 ~~~i~iGD~~~Di~~~~~ag~~v~~~~~~  179 (201)
T 4ap9_A          151 GFILAMGDGYADAKMFERADMGIAVGREI  179 (201)
T ss_dssp             SCEEEEECTTCCHHHHHHCSEEEEESSCC
T ss_pred             CcEEEEeCCHHHHHHHHhCCceEEECCCC
Confidence            99999999999999999999986555543

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.78  E-value=7.2e-19  Score=149.63  Aligned_cols=102  Identities=9%  Similarity=0.066  Sum_probs=83.0

Q ss_pred             CCChhHHHHHHHHHHC-CCeEEEEeCC---------------------ChhhHHHHHHHHhCCccccCcceE--------
Q 022348          179 EPRPGVLRLMDEAKAA-GKKVAVCSAA---------------------TKSSVILCLENLIGMERFEGLDCF--------  228 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~-g~~i~i~S~~---------------------~~~~~~~~l~~~~~l~~~~~fd~v--------  228 (298)
                      ..++++.++++.++++ |+++++.|+.                     ....+...++.+ ++..+  |..+        
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~--~~~~~~~~~~~~  198 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEY-GVSVN--INRCNPLAGDPE  198 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHH-TEEEE--EEECCGGGTCCT
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHc-CCCEE--EEEccccccCCC
Confidence            4778999999999998 9999999977                     445566667776 77655  4433        


Q ss_pred             --EeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          229 --LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       229 --~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                        +..+..+..++++..+..+++++|+++++|++|||+.||+.+++.+|+.+++.++
T Consensus       199 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~  255 (289)
T 3gyg_A          199 DSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNA  255 (289)
T ss_dssp             TEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTC
T ss_pred             CceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCc
Confidence              4455566789999999999999999999999999999999999999987655443

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.78  E-value=4.7e-20  Score=149.31  Aligned_cols=85  Identities=11%  Similarity=0.117  Sum_probs=77.4

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      +|+.|+++|++++|+|+.....++..++.+ ++..+  |+.+         ||++++++.+++++|+++++|++|||+.+
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~l-gi~~~--f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~n  151 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTL-GITHL--YQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLI  151 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHH-TCCEE--ECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCchh--hccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHH
Confidence            899999999999999999999999999998 88876  5533         88899999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcC
Q 022348          267 GLQAATRAGMACVITYT  283 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~  283 (298)
                      |+++++.+|+.+++.++
T Consensus       152 Di~~~~~ag~~~a~~~~  168 (211)
T 3ij5_A          152 DWPVMAQVGLSVAVADA  168 (211)
T ss_dssp             GHHHHTTSSEEEECTTS
T ss_pred             HHHHHHHCCCEEEeCCc
Confidence            99999999999766554

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.78  E-value=2.5e-20  Score=160.03  Aligned_cols=109  Identities=15%  Similarity=0.158  Sum_probs=87.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhH--H-HHHHHHhC-CccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV--I-LCLENLIG-MERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGI  253 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~--~-~~l~~~~~-l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi  253 (298)
                      ..++|++.++++.|++.|+ ++++||.+....  . ..+..+ | +..+  |+.++++++++.+||+|.+|+.+++++|+
T Consensus       155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~-g~l~~~--~~~~~~~~~~~~~KP~~~~~~~~~~~lgi  230 (306)
T 2oyc_A          155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGT-GSLAAA--VETASGRQALVVGKPSPYMFECITENFSI  230 (306)
T ss_dssp             TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECH-HHHHHH--HHHHHTCCCEECSTTSTHHHHHHHHHSCC
T ss_pred             CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCC-cHHHHH--HHHHhCCCceeeCCCCHHHHHHHHHHcCC
Confidence            3568999999999999999 999999886533  1 122222 2 4445  77777778888999999999999999999


Q ss_pred             CCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCC-chhHh
Q 022348          254 SEKDCLVVEDSV-IGLQAATRAGMACVITYTSS-TAEQV  290 (298)
Q Consensus       254 ~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~-~~~~~  290 (298)
                      +|++|++|||+. +|+++|+.+|+.++++..+. ..+++
T Consensus       231 ~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~  269 (306)
T 2oyc_A          231 DPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEA  269 (306)
T ss_dssp             CGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHH
T ss_pred             ChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHH
Confidence            999999999997 99999999999999776544 34444

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.78  E-value=6.5e-20  Score=144.61  Aligned_cols=83  Identities=16%  Similarity=0.177  Sum_probs=74.4

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      +|+.|+++|++++|+||+....++..++.+ ++. +  |+    +     .||++..++.+++++|+++++|++|||+.+
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~l-gi~-~--~~----~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~n  113 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKL-KIP-V--LH----G-----IDRKDLALKQWCEEQGIAPERVLYVGNDVN  113 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHH-TCC-E--EE----S-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHc-CCe-e--Ee----C-----CCChHHHHHHHHHHcCCCHHHEEEEcCCHH
Confidence            899999999999999999999999999998 776 3  32    2     299999999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEc
Q 022348          267 GLQAATRAGMACVITY  282 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~  282 (298)
                      |+++++.+|+.+++.+
T Consensus       114 D~~~~~~ag~~v~~~~  129 (176)
T 3mmz_A          114 DLPCFALVGWPVAVAS  129 (176)
T ss_dssp             GHHHHHHSSEEEECTT
T ss_pred             HHHHHHHCCCeEECCC
Confidence            9999999998866544

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.78  E-value=2.1e-19  Score=150.89  Aligned_cols=109  Identities=11%  Similarity=0.107  Sum_probs=86.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhH--HHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV--ILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~--~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      ..++|++.++++.|+ +|+++ |+||.+....  ...+....++..+  |+.++++++...+||+|.+|+.++++  ++|
T Consensus       129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~  202 (263)
T 1zjj_A          129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAA--LKVATNVEPIIIGKPNEPMYEVVREM--FPG  202 (263)
T ss_dssp             TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHH--HHHHHCCCCEECSTTSHHHHHHHHHH--STT
T ss_pred             CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHH--HHHHhCCCccEecCCCHHHHHHHHHh--CCc
Confidence            467899999999999 89998 9999887543  2222221245555  78888888888999999999999999  899


Q ss_pred             CcEEEEecCh-hhHHHHHHcCCeEEEEcCCC-chhHhhh
Q 022348          256 KDCLVVEDSV-IGLQAATRAGMACVITYTSS-TAEQVRI  292 (298)
Q Consensus       256 ~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~-~~~~~~~  292 (298)
                      ++|+||||+. +|+.+|+++|+.++++..+. ..+++..
T Consensus       203 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~  241 (263)
T 1zjj_A          203 EELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKK  241 (263)
T ss_dssp             CEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTT
T ss_pred             ccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHh
Confidence            9999999996 99999999999999776543 3445443

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.78  E-value=4e-19  Score=138.39  Aligned_cols=86  Identities=17%  Similarity=0.132  Sum_probs=77.5

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      +|+.|+++|++++++||+....++..++.+ ++..+  |+.         .||+|.++..+++++|+++++|+||||+.+
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~-gl~~~--~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~  106 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKL-KVDYL--FQG---------VVDKLSAAEELCNELGINLEQVAYIGDDLN  106 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHT-TCSEE--ECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCSGG
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHc-CCCEe--ecc---------cCChHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            789999999999999999999999999998 88766  443         399999999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcCC
Q 022348          267 GLQAATRAGMACVITYTS  284 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~~  284 (298)
                      |+++++.+|+.+++.++.
T Consensus       107 Di~~~~~ag~~~~~~~~~  124 (164)
T 3e8m_A          107 DAKLLKRVGIAGVPASAP  124 (164)
T ss_dssp             GHHHHTTSSEEECCTTSC
T ss_pred             HHHHHHHCCCeEEcCChH
Confidence            999999999987765443

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.77  E-value=5.1e-19  Score=150.45  Aligned_cols=88  Identities=17%  Similarity=0.172  Sum_probs=76.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|+++|++++|+||+....+...++.+ |+..+  |+.++         |.  .+..++++++.. ++
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~--f~~i~---------~~--~K~~~~~~l~~~-~~  226 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLDLV--IAEVL---------PH--QKSEEVKKLQAK-EV  226 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE--ECSCC---------TT--CHHHHHHHHTTT-CC
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-CCcee--eeecC---------hH--HHHHHHHHHhcC-Ce
Confidence            478999999999999999999999999999999999998 99877  66543         11  226788999999 99


Q ss_pred             EEEEecChhhHHHHHHcCCeEEE
Q 022348          258 CLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      |++|||+.+|+.+|+++|+.+.+
T Consensus       227 ~~~vGDs~~Di~~a~~ag~~v~~  249 (287)
T 3a1c_A          227 VAFVGDGINDAPALAQADLGIAV  249 (287)
T ss_dssp             EEEEECTTTCHHHHHHSSEEEEE
T ss_pred             EEEEECCHHHHHHHHHCCeeEEe
Confidence            99999999999999999998444

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.77  E-value=1e-19  Score=152.74  Aligned_cols=102  Identities=13%  Similarity=0.169  Sum_probs=70.8

Q ss_pred             ChhHHHHHHHHHHC-CCeEEEEeCCChhhHHHHHHHHhCCcccc-CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          181 RPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMERFE-GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       181 ~pg~~~~l~~L~~~-g~~i~i~S~~~~~~~~~~l~~~~~l~~~~-~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      ++++.++++.|++. |+++ ++++.........+... ++..+. .++.....+.++.+||++.+|+.+++++|+++++|
T Consensus       133 ~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~  210 (271)
T 2x4d_A          133 YQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLML-DVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQA  210 (271)
T ss_dssp             HHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEEE-CHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGE
T ss_pred             HHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCccc-ChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceE
Confidence            56777777888777 7777 66665432211111111 111110 01122334556678999999999999999999999


Q ss_pred             EEEecCh-hhHHHHHHcCCeEEEEcCC
Q 022348          259 LVVEDSV-IGLQAATRAGMACVITYTS  284 (298)
Q Consensus       259 ~~vgD~~-~Di~~a~~aG~~~v~~~~~  284 (298)
                      ++|||+. ||++|++.+|+.++++..+
T Consensus       211 i~iGD~~~nDi~~a~~aG~~~~~v~~g  237 (271)
T 2x4d_A          211 VMIGDDIVGDVGGAQRCGMRALQVRTG  237 (271)
T ss_dssp             EEEESCTTTTHHHHHHTTCEEEEESST
T ss_pred             EEECCCcHHHHHHHHHCCCcEEEEcCC
Confidence            9999998 9999999999999987665

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.77  E-value=6e-19  Score=140.70  Aligned_cols=84  Identities=15%  Similarity=0.183  Sum_probs=76.1

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      +|+.|+++|++++|+||.....++..++.+ |+..+  |+.+         +++|+++..+++++|+++++|++|||+.+
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~l-gl~~~--f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~n  121 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSL-GIEHL--FQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLP  121 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHH-TCSEE--ECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHc-CCHHH--hcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHH
Confidence            889999999999999999999999999998 99877  5543         67789999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEc
Q 022348          267 GLQAATRAGMACVITY  282 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~  282 (298)
                      |+++++.+|+.+++.+
T Consensus       122 Di~~~~~ag~~~~~~~  137 (189)
T 3mn1_A          122 DLPVIRRVGLGMAVAN  137 (189)
T ss_dssp             GHHHHHHSSEEEECTT
T ss_pred             HHHHHHHCCCeEEeCC
Confidence            9999999999876544

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.77  E-value=5.4e-20  Score=155.41  Aligned_cols=89  Identities=18%  Similarity=0.222  Sum_probs=72.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .++||+.++|+.|+++|++++++||.....+...++.+ ++..+  |+.++.++.       ....+...+.+     +|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~-gl~~~--f~~~~~~~k-------~~~~k~~~~~~-----~~  208 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEEL-GLDDY--FAEVLPHEK-------AEKVKEVQQKY-----VT  208 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE--ECSCCGGGH-------HHHHHHHHTTS-----CE
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CChhH--hHhcCHHHH-------HHHHHHHHhcC-----CE
Confidence            58899999999999999999999999999999999998 99888  777765532       22333333322     78


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEc
Q 022348          259 LVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      ++|||+.||++|++.+|+.+++.+
T Consensus       209 ~~vGD~~nDi~~~~~Ag~~va~~~  232 (280)
T 3skx_A          209 AMVGDGVNDAPALAQADVGIAIGA  232 (280)
T ss_dssp             EEEECTTTTHHHHHHSSEEEECSC
T ss_pred             EEEeCCchhHHHHHhCCceEEecC
Confidence            999999999999999998765544

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.77  E-value=2e-18  Score=153.92  Aligned_cols=95  Identities=22%  Similarity=0.320  Sum_probs=86.0

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCC------------hhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHH
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAAT------------KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA  247 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~------------~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~  247 (298)
                      ++||+.++|+.|+++|++++|+||..            ...+...++.+ |+.    |+.+++++++...||+|.+|..+
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~l-gl~----fd~i~~~~~~~~~KP~p~~~~~a  162 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKL-GVP----FQVLVATHAGLNRKPVSGMWDHL  162 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHH-TSC----CEEEEECSSSTTSTTSSHHHHHH
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHc-CCC----EEEEEECCCCCCCCCCHHHHHHH
Confidence            79999999999999999999999965            22266778887 773    79999999999999999999999


Q ss_pred             HHHhC----CCCCcEEEEecCh-----------------hhHHHHHHcCCeEE
Q 022348          248 AKRLG----ISEKDCLVVEDSV-----------------IGLQAATRAGMACV  279 (298)
Q Consensus       248 ~~~lg----i~~~~~~~vgD~~-----------------~Di~~a~~aG~~~v  279 (298)
                      ++++|    +++++|+||||+.                 .|+++|+++|+.++
T Consensus       163 ~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~  215 (416)
T 3zvl_A          163 QEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  215 (416)
T ss_dssp             HHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEE
T ss_pred             HHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCccc
Confidence            99998    9999999999997                 79999999999976

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.76  E-value=4.3e-20  Score=156.80  Aligned_cols=105  Identities=14%  Similarity=0.291  Sum_probs=85.4

Q ss_pred             hHHHHHHHHHHCCCeEEEEeCCChhhH--H--HHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHh----CCC
Q 022348          183 GVLRLMDEAKAAGKKVAVCSAATKSSV--I--LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL----GIS  254 (298)
Q Consensus       183 g~~~~l~~L~~~g~~i~i~S~~~~~~~--~--~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l----gi~  254 (298)
                      ...++++.|+++|++ +|+||.+....  .  ..++.. ++..+  |+.++++++++.+||+|++|+.+++++    |++
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~-~l~~~--f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  224 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIG-GVATM--IESILGRRFIRFGKPDSQMFMFAYDMLRQKMEIS  224 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHH-HHHHH--HHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCC
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCC-hHHHH--HHHHhCCceeEecCCCHHHHHHHHHHHhhccCCC
Confidence            566677789999999 99999976644  2  112333 66667  898888888889999999999999999    999


Q ss_pred             CCcEEEEecCh-hhHHHHHHcCCeEEEEcCC-CchhHhh
Q 022348          255 EKDCLVVEDSV-IGLQAATRAGMACVITYTS-STAEQVR  291 (298)
Q Consensus       255 ~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~-~~~~~~~  291 (298)
                      |++|+||||++ +|+.+|+++|+.++++..+ ...+++.
T Consensus       225 ~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~  263 (284)
T 2hx1_A          225 KREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAE  263 (284)
T ss_dssp             GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHH
T ss_pred             cceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHH
Confidence            99999999996 9999999999999977544 3344443

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.76  E-value=7.6e-19  Score=139.02  Aligned_cols=92  Identities=16%  Similarity=0.142  Sum_probs=80.5

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL  259 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~  259 (298)
                      +.++..++|+.|+++|++++++||.....+...++.+ ++..+  |+.         .||++.+++.+++++|+++++|+
T Consensus        36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~l-gl~~~--~~~---------~k~k~~~~~~~~~~~~~~~~~~~  103 (180)
T 1k1e_A           36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADL-GIKLF--FLG---------KLEKETACFDLMKQAGVTAEQTA  103 (180)
T ss_dssp             EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHH-TCCEE--EES---------CSCHHHHHHHHHHHHTCCGGGEE
T ss_pred             eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHc-CCcee--ecC---------CCCcHHHHHHHHHHcCCCHHHEE
Confidence            3345568999999999999999999999999999998 88766  432         58999999999999999999999


Q ss_pred             EEecChhhHHHHHHcCCeEEEEcC
Q 022348          260 VVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       260 ~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      +|||+.+|+++++.+|+.+++.++
T Consensus       104 ~vGD~~~Di~~~~~ag~~~~~~~~  127 (180)
T 1k1e_A          104 YIGDDSVDLPAFAACGTSFAVADA  127 (180)
T ss_dssp             EEECSGGGHHHHHHSSEEEECTTS
T ss_pred             EECCCHHHHHHHHHcCCeEEeCCc
Confidence            999999999999999999876443

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.75  E-value=1e-18  Score=139.78  Aligned_cols=85  Identities=13%  Similarity=0.208  Sum_probs=76.1

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      .|+.|+++|++++|+||+....++..++.+ |+..+  |+.         .||++..+..+++++|+++++|++|||+.|
T Consensus        60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~l-gi~~~--~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~n  127 (195)
T 3n07_A           60 GVKALMNAGIEIAIITGRRSQIVENRMKAL-GISLI--YQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLI  127 (195)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHT-TCCEE--ECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGG
T ss_pred             HHHHHHHCCCEEEEEECcCHHHHHHHHHHc-CCcEE--eeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHH
Confidence            488999999999999999999999999998 88766  442         389999999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcC
Q 022348          267 GLQAATRAGMACVITYT  283 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~  283 (298)
                      |+++++.+|+.+++.++
T Consensus       128 Di~~~~~ag~~va~~na  144 (195)
T 3n07_A          128 DWPVMEKVALRVCVADG  144 (195)
T ss_dssp             GHHHHTTSSEEEECTTS
T ss_pred             HHHHHHHCCCEEEECCh
Confidence            99999999999765443

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.74  E-value=2.6e-18  Score=137.19  Aligned_cols=84  Identities=21%  Similarity=0.324  Sum_probs=76.0

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      .|+.|+++|++++|+||+....+...++.+ ++..+  |+.+         ||++.+++.+++++|+++++|+||||+.+
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~l-gl~~~--~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~  121 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQL-GITHY--YKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLP  121 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHH-TCCEE--ECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHc-CCccc--eeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence            588999999999999999999999999998 88876  5543         99999999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEc
Q 022348          267 GLQAATRAGMACVITY  282 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~  282 (298)
                      |+++++.+|+.+++.+
T Consensus       122 Di~~~~~ag~~~~~~~  137 (191)
T 3n1u_A          122 DLPLIQQVGLGVAVSN  137 (191)
T ss_dssp             GHHHHHHSSEEEECTT
T ss_pred             HHHHHHHCCCEEEeCC
Confidence            9999999999975443

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.72  E-value=8.8e-18  Score=142.84  Aligned_cols=105  Identities=13%  Similarity=0.109  Sum_probs=72.8

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCC----CCCCCCCCHHHHHHHHHHhCCCC
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD----DVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~----~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      +.+++.+++..+....+++.+. .. .......++.+....  ..+..+.++.    ..+.+.+++.+++.+++++|+++
T Consensus       143 ~~~~~~~~~~~~~~~~~ki~~~-~~-~~~~~~~~~~l~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~  218 (290)
T 3dnp_A          143 FVESLSDLLMDEPVSAPVIEVY-TE-HDIQHDITETITKAF--PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSM  218 (290)
T ss_dssp             ECSCHHHHHHHSCCCCSEEEEE-CC-GGGHHHHHHHHHHHC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCG
T ss_pred             ccCCHHHHHhcCCCCceEEEEe-CC-HHHHHHHHHHHHhhC--CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCH
Confidence            4566777777777777888553 33 333455554431111  1245544433    23466788999999999999999


Q ss_pred             CcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          256 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      ++|++|||+.||++|++.+|+.+++.++....+
T Consensus       219 ~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k  251 (290)
T 3dnp_A          219 DDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIK  251 (290)
T ss_dssp             GGEEEEECSGGGHHHHHHSSEEEECTTSCHHHH
T ss_pred             HHEEEECCchhhHHHHHhcCCEEEecCCcHHHH
Confidence            999999999999999999999877755543333

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.71  E-value=6.6e-18  Score=142.80  Aligned_cols=100  Identities=12%  Similarity=0.151  Sum_probs=66.9

Q ss_pred             hHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhC-CccccCcceEEeCC----CCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG-MERFEGLDCFLAGD----DVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       183 g~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~-l~~~~~fd~v~~~~----~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ++.++.+.++....++.++++  ........+.+.. +...  ++.+.++.    ..+.+++++.+++.+++++|+++++
T Consensus       140 ~~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~l~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~  215 (279)
T 4dw8_A          140 ETNDFLTDITLPVAKCLIVGD--AGKLIPVESELCIRLQGK--INVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREE  215 (279)
T ss_dssp             ECSCHHHHSCSCCSCEEEESC--HHHHHHHHHHHHHHTTTT--CEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGG
T ss_pred             cHHHHHHhhcCCceEEEEeCC--HHHHHHHHHHHHHHhcCC--EEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHH
Confidence            344445555566677766653  2233434443310 1111  45555543    2456678899999999999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      +++|||+.||++|++.+|+.+++-++...
T Consensus       216 ~i~~GD~~NDi~m~~~ag~~vam~na~~~  244 (279)
T 4dw8_A          216 VIAIGDGYNDLSMIKFAGMGVAMGNAQEP  244 (279)
T ss_dssp             EEEEECSGGGHHHHHHSSEEEECTTSCHH
T ss_pred             EEEECCChhhHHHHHHcCcEEEcCCCcHH
Confidence            99999999999999999988766554433

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.71  E-value=1.5e-17  Score=139.57  Aligned_cols=68  Identities=21%  Similarity=0.226  Sum_probs=57.6

Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-hhhHHHHHHcCCeEEEEc-CCCchhHhhh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITY-TSSTAEQVRI  292 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~-~~Di~~a~~aG~~~v~~~-~~~~~~~~~~  292 (298)
                      |+.++..+....+||+|.+|+.+++++|++++++++|||+ .+|+++|+.+|+.++++. |....+++..
T Consensus       169 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~  238 (264)
T 3epr_A          169 LEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPD  238 (264)
T ss_dssp             HHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGG
T ss_pred             HHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHh
Confidence            5555666777889999999999999999999999999999 599999999999999764 5555555554

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.71  E-value=6.8e-17  Score=128.65  Aligned_cols=85  Identities=14%  Similarity=0.202  Sum_probs=76.5

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      +|+.|+++|++++|+||+....+...++.+ ++..+  |+         ..||++.+++.+++++|+++++|+||||+.+
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~l-gl~~~--~~---------~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~  128 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATL-GITHL--YQ---------GQSNKLIAFSDLLEKLAIAPENVAYVGDDLI  128 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHH-TCCEE--EC---------SCSCSHHHHHHHHHHHTCCGGGEEEEESSGG
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHc-CCcee--ec---------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            889999999999999999999899999988 88765  43         2599999999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcC
Q 022348          267 GLQAATRAGMACVITYT  283 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~  283 (298)
                      |+.+++.+|+.+++.++
T Consensus       129 Di~~a~~ag~~~~~~~~  145 (188)
T 2r8e_A          129 DWPVMEKVGLSVAVADA  145 (188)
T ss_dssp             GHHHHTTSSEEEECTTS
T ss_pred             HHHHHHHCCCEEEecCc
Confidence            99999999999876544

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.68  E-value=3.6e-16  Score=123.48  Aligned_cols=85  Identities=12%  Similarity=0.133  Sum_probs=62.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCC---hh--hHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHh
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAAT---KS--SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL  251 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~---~~--~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l  251 (298)
                      ...++||+.++|+.|++. ++++|+||..   ..  .....+..+.+...+  ++.++++++.               ++
T Consensus        67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~--~~~i~~~~~~---------------~l  128 (180)
T 3bwv_A           67 NLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDP--QHFVFCGRKN---------------II  128 (180)
T ss_dssp             SCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCG--GGEEECSCGG---------------GB
T ss_pred             cCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCc--ccEEEeCCcC---------------ee
Confidence            467999999999999985 9999999983   21  224445554355555  6788877651               11


Q ss_pred             CCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          252 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       252 gi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                          ++|++|||+.+|+.  .++| .+|++..+.+
T Consensus       129 ----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~  156 (180)
T 3bwv_A          129 ----LADYLIDDNPKQLE--IFEG-KSIMFTASHN  156 (180)
T ss_dssp             ----CCSEEEESCHHHHH--HCSS-EEEEECCGGG
T ss_pred             ----cccEEecCCcchHH--HhCC-CeEEeCCCcc
Confidence                77999999999985  5689 9888775443

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.68  E-value=3.4e-17  Score=134.69  Aligned_cols=79  Identities=19%  Similarity=0.111  Sum_probs=60.4

Q ss_pred             EEEEe-CCChhhHHHHHHHHhCCccccCcceEEeCC----CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHH
Q 022348          198 VAVCS-AATKSSVILCLENLIGMERFEGLDCFLAGD----DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAAT  272 (298)
Q Consensus       198 i~i~S-~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~----~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~  272 (298)
                      +++++ +.....+...++.+ +  ..  |+.+ ++.    ....++|++.+++.+++++|++++++++|||+.||+++++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~-~--~~--~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~  186 (231)
T 1wr8_A          113 LVIMRETINVETVREIINEL-N--LN--LVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFK  186 (231)
T ss_dssp             EEECTTTSCHHHHHHHHHHT-T--CS--CEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHH
T ss_pred             EEEECCCCCHHHHHHHHHhc-C--Cc--EEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence            35666 44566666677665 4  22  5665 442    2357899999999999999999999999999999999999


Q ss_pred             HcCCeEEEEc
Q 022348          273 RAGMACVITY  282 (298)
Q Consensus       273 ~aG~~~v~~~  282 (298)
                      .+|+.+++.+
T Consensus       187 ~ag~~v~~~~  196 (231)
T 1wr8_A          187 VVGYKVAVAQ  196 (231)
T ss_dssp             HSSEEEECTT
T ss_pred             HcCCeEEecC
Confidence            9999954433

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.68  E-value=8.2e-18  Score=142.23  Aligned_cols=55  Identities=13%  Similarity=0.250  Sum_probs=42.8

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHh
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQV  290 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~  290 (298)
                      .+..++.+++.+++++|++++++++|||+.||++|++.+|+.+++-++....++.
T Consensus       194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~  248 (279)
T 3mpo_A          194 RRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEA  248 (279)
T ss_dssp             SSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHH
T ss_pred             CCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHh
Confidence            4455789999999999999999999999999999999999987777766554443

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.67  E-value=2.3e-17  Score=139.91  Aligned_cols=92  Identities=9%  Similarity=0.075  Sum_probs=63.9

Q ss_pred             HCCCeEEEEe-CCChhh-HHHHHHHHhCCccccCcceEEeCCC----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          193 AAGKKVAVCS-AATKSS-VILCLENLIGMERFEGLDCFLAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       193 ~~g~~i~i~S-~~~~~~-~~~~l~~~~~l~~~~~fd~v~~~~~----~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      +..+++.++. ...... .....+.+ +  ..  +..+.++..    ...+.+++.+++.+++++|++++++++|||+.|
T Consensus       164 ~~~~ki~i~~~~~~~~~~~~~l~~~~-~--~~--~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~N  238 (283)
T 3dao_A          164 NDIIKFTVFHPDKCEELCTPVFIPAW-N--KK--AHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLN  238 (283)
T ss_dssp             SCCCEEEEECSSCHHHHHTTTHHHHH-T--TT--EEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred             cCceEEEEEcChHHHHHHHHHHHHHh-c--CC--EEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence            5678888883 322221 22233333 3  11  455555442    345677899999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcCCCchhH
Q 022348          267 GLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      |++|++.+|+.+++-++....++
T Consensus       239 Di~ml~~ag~~vam~na~~~~k~  261 (283)
T 3dao_A          239 DIEMLQNAGISYAVSNARQEVIA  261 (283)
T ss_dssp             GHHHHHHSSEEEEETTSCHHHHH
T ss_pred             HHHHHHhCCCEEEcCCCCHHHHH
Confidence            99999999998777666544433

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.67  E-value=1.1e-16  Score=134.27  Aligned_cols=108  Identities=18%  Similarity=0.127  Sum_probs=72.0

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHH---HHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~---~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      .++++.+.+..++. +. ..++||.+......   .... .++..+  |+.++..+....+||++.+|+.+++++|++++
T Consensus       127 ~~~~~~~~~~~l~~-~~-~~i~~n~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~  201 (266)
T 3pdw_A          127 TYEKFAVGCLAIRN-GA-RFISTNGDIAIPTERGLLPGN-GSLTSV--LTVSTGVQPVFIGKPESIIMEQAMRVLGTDVS  201 (266)
T ss_dssp             CHHHHHHHHHHHHT-TC-EEEESCCCCEEEETTEEEECH-HHHHHH--HHHHHCCCCEECSTTSSHHHHHHHHHHTCCGG
T ss_pred             CHHHHHHHHHHHHC-CC-eEEEEcCCceeECCCceEecc-hHHHHH--HHHHhCCCccccCCCCHHHHHHHHHHcCCChh
Confidence            45666666666664 34 45666655321100   0000 012223  55555666677899999999999999999999


Q ss_pred             cEEEEecC-hhhHHHHHHcCCeEEEEcCCC-chhHhhh
Q 022348          257 DCLVVEDS-VIGLQAATRAGMACVITYTSS-TAEQVRI  292 (298)
Q Consensus       257 ~~~~vgD~-~~Di~~a~~aG~~~v~~~~~~-~~~~~~~  292 (298)
                      ++++|||+ .||++|++.+|+.++++..+. ..+++++
T Consensus       202 ~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~  239 (266)
T 3pdw_A          202 ETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTD  239 (266)
T ss_dssp             GEEEEESCTTTHHHHHHHHTCEEEEECCC------CCT
T ss_pred             hEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHh
Confidence            99999999 799999999999999776544 3444554

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.48  E-value=5e-18  Score=142.43  Aligned_cols=91  Identities=19%  Similarity=0.280  Sum_probs=80.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|++.|++++++||.....+...++.+ |+..+  |+.++           |+.+..++++++..+++
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-gl~~~--f~~~~-----------p~~k~~~~~~l~~~~~~  200 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKEL-NIQEY--YSNLS-----------PEDKVRIIEKLKQNGNK  200 (263)
Confidence            369999999999999999999999999999999999998 99887  77665           34567789999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEc
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      |+||||+.+|+.+++.+|+.+.+.+
T Consensus       201 ~~~VGD~~~D~~aa~~Agv~va~g~  225 (263)
T 2yj3_A          201 VLMIGDGVNDAAALALADVSVAMGN  225 (263)
Confidence            9999999999999999998865543

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.66  E-value=3.8e-16  Score=130.03  Aligned_cols=103  Identities=15%  Similarity=0.133  Sum_probs=77.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCC---hhhHHHHHHHHhCCc--cccCcceEEeCCCCCCCCCCHHHHHHHHHHh
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAAT---KSSVILCLENLIGME--RFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL  251 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~---~~~~~~~l~~~~~l~--~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l  251 (298)
                      ...++||+.++|+.|+++|++++|+||+.   ...+...|+.+ |+.  .+  |+.++++++.  .||.+  ...++ ..
T Consensus        99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~-Gl~~v~~--~~vi~~~~~~--~K~~~--~~~~~-~~  170 (258)
T 2i33_A           99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERV-GAPQATK--EHILLQDPKE--KGKEK--RRELV-SQ  170 (258)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHH-TCSSCST--TTEEEECTTC--CSSHH--HHHHH-HH
T ss_pred             CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHc-CCCcCCC--ceEEECCCCC--CCcHH--HHHHH-Hh
Confidence            45799999999999999999999999998   44566677887 887  55  7778776643  45544  33333 33


Q ss_pred             CCCCCcEEEEecChhhHHHHH-------H---------cCCeEEEEcCCCchhH
Q 022348          252 GISEKDCLVVEDSVIGLQAAT-------R---------AGMACVITYTSSTAEQ  289 (298)
Q Consensus       252 gi~~~~~~~vgD~~~Di~~a~-------~---------aG~~~v~~~~~~~~~~  289 (298)
                      |.  ..|++|||+.+|+.+|.       +         +|+.+++++++.....
T Consensus       171 ~~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w  222 (258)
T 2i33_A          171 TH--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDW  222 (258)
T ss_dssp             HE--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHH
T ss_pred             CC--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchh
Confidence            43  34999999999999982       4         8999998877655443

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.65  E-value=6.1e-17  Score=136.33  Aligned_cols=81  Identities=9%  Similarity=0.102  Sum_probs=60.4

Q ss_pred             eEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCC------CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHH
Q 022348          197 KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD------DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQA  270 (298)
Q Consensus       197 ~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~------~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~  270 (298)
                      ++.+.  ..........+.+ +..    |+.+.++.      ....+++++.+++.+++++|++++++++|||+.||++|
T Consensus       159 ki~~~--~~~~~~~~~~~~l-~~~----~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m  231 (274)
T 3fzq_A          159 KICLW--SNEKVFDEVKDIL-QDK----MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVM  231 (274)
T ss_dssp             EEEEE--CCHHHHHHHHHHH-GGG----EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHH
T ss_pred             EEEEE--cCHHHHHHHHHHh-hcc----eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHH
Confidence            44444  4555566666665 322    45554443      34577889999999999999999999999999999999


Q ss_pred             HHHcCCeEEEEcCC
Q 022348          271 ATRAGMACVITYTS  284 (298)
Q Consensus       271 a~~aG~~~v~~~~~  284 (298)
                      ++.+|+.+++.++.
T Consensus       232 ~~~ag~~vam~na~  245 (274)
T 3fzq_A          232 FQASDVTIAMKNSH  245 (274)
T ss_dssp             HHTCSEEEEETTSC
T ss_pred             HHhcCceEEecCcc
Confidence            99999887665554

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.63  E-value=5e-16  Score=120.87  Aligned_cols=84  Identities=15%  Similarity=0.136  Sum_probs=68.3

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      .|+.|+++|++++|+||.  ..+...++.+ .+.    ++ ++.+     .++++.++..+++++|+++++|++|||+.|
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l-~lg----i~-~~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~n  110 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLSAL-KLD----CK-TEVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVS  110 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHHTT-CCC----CC-EECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHHHh-CCC----cE-EEEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHh
Confidence            689999999999999999  5577777743 222    23 2322     367899999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcC
Q 022348          267 GLQAATRAGMACVITYT  283 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~  283 (298)
                      |+++++.+|+.+++.+.
T Consensus       111 Di~~~~~ag~~~a~~na  127 (168)
T 3ewi_A          111 DEECLKRVGLSAVPADA  127 (168)
T ss_dssp             GHHHHHHSSEEEECTTC
T ss_pred             HHHHHHHCCCEEEeCCh
Confidence            99999999999765333

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.62  E-value=1.1e-16  Score=137.01  Aligned_cols=87  Identities=8%  Similarity=0.022  Sum_probs=60.1

Q ss_pred             CeEEEEeCCChhhHHHHHHHHhC-Ccc-ccCcceEEeCCC----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHH
Q 022348          196 KKVAVCSAATKSSVILCLENLIG-MER-FEGLDCFLAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQ  269 (298)
Q Consensus       196 ~~i~i~S~~~~~~~~~~l~~~~~-l~~-~~~fd~v~~~~~----~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~  269 (298)
                      .++.+.+ . .......++.+.. +.. .  ++.+.++..    .+.+.+++.+++.+++++|++++++++|||+.||++
T Consensus       183 ~ki~~~~-~-~~~~~~~~~~l~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~  258 (304)
T 3l7y_A          183 FKLTLQV-K-EEESAQIMKAIADYKTSQR--LVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIE  258 (304)
T ss_dssp             EEEEEEC-C-GGGHHHHHHHHHTSTTTTT--EEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred             EEEEEEc-C-HHHHHHHHHHHHHhcCCCe--EEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHH
Confidence            4445554 3 3345555555521 222 1  455554432    345667789999999999999999999999999999


Q ss_pred             HHHHcCCeEEEEcCCCc
Q 022348          270 AATRAGMACVITYTSST  286 (298)
Q Consensus       270 ~a~~aG~~~v~~~~~~~  286 (298)
                      |++.+|+.+++-++...
T Consensus       259 m~~~ag~~vam~na~~~  275 (304)
T 3l7y_A          259 MLKLAKYSYAMANAPKN  275 (304)
T ss_dssp             HHHHCTEEEECTTSCHH
T ss_pred             HHHhcCCeEEcCCcCHH
Confidence            99999988766554433

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.60  E-value=1.6e-15  Score=127.38  Aligned_cols=58  Identities=31%  Similarity=0.381  Sum_probs=49.8

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-hhhHHHHHHcCCeEEEEcCCC-chhHhh
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSS-TAEQVR  291 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~-~~Di~~a~~aG~~~v~~~~~~-~~~~~~  291 (298)
                      ...+||+|.+|+.+++++|++++++++|||+ .+|+++|+.+|+.++++..+. ..+++.
T Consensus       183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~  242 (268)
T 3qgm_A          183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLD  242 (268)
T ss_dssp             EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHH
T ss_pred             eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHH
Confidence            5678999999999999999999999999999 599999999999999775443 334443

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.60  E-value=1.7e-16  Score=133.68  Aligned_cols=87  Identities=11%  Similarity=0.084  Sum_probs=65.0

Q ss_pred             HHHCCCeEEEEeCCChhhHHHHHHHHhC--CccccCcceEEeCC----CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecC
Q 022348          191 AKAAGKKVAVCSAATKSSVILCLENLIG--MERFEGLDCFLAGD----DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS  264 (298)
Q Consensus       191 L~~~g~~i~i~S~~~~~~~~~~l~~~~~--l~~~~~fd~v~~~~----~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~  264 (298)
                      +++.++++.++++...  ....++.+ .  +...  |+.+.++.    ....+++++.+++.+++++|+++++|++|||+
T Consensus       142 ~~~~~~ki~i~~~~~~--~~~~~~~l-~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~  216 (271)
T 1rlm_A          142 IDDVLFKFSLNLPDEQ--IPLVIDKL-HVALDGI--MKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDS  216 (271)
T ss_dssp             CCSCEEEEEEECCGGG--HHHHHHHH-HHHTTTS--SEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred             CCCceEEEEEEcCHHH--HHHHHHHH-HHHcCCc--EEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCc
Confidence            3456778888876533  45555544 2  3333  66666552    24578899999999999999999999999999


Q ss_pred             hhhHHHHHHcCCeEEEEc
Q 022348          265 VIGLQAATRAGMACVITY  282 (298)
Q Consensus       265 ~~Di~~a~~aG~~~v~~~  282 (298)
                      .||++|++.+|+.+++.+
T Consensus       217 ~nD~~m~~~ag~~va~~n  234 (271)
T 1rlm_A          217 GNDAEMLKMARYSFAMGN  234 (271)
T ss_dssp             GGGHHHHHHCSEEEECTT
T ss_pred             HHHHHHHHHcCCeEEeCC
Confidence            999999999999865433

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.59  E-value=6.8e-16  Score=128.94  Aligned_cols=46  Identities=15%  Similarity=0.222  Sum_probs=41.1

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      .+-.+..+++.+++++|+++++|++|||+.||++|++.+|+.+++-
T Consensus       180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~  225 (258)
T 2pq0_A          180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG  225 (258)
T ss_dssp             SSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC
Confidence            3445678899999999999999999999999999999999987763

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.57  E-value=1.9e-16  Score=132.58  Aligned_cols=48  Identities=8%  Similarity=0.120  Sum_probs=44.0

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      ...++|++.+++.+++++|+++++|++|||+.||++|++.+|+.+++.
T Consensus       182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~  229 (261)
T 2rbk_A          182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG  229 (261)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec
Confidence            457889999999999999999999999999999999999999976553

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.57  E-value=1.7e-15  Score=127.18  Aligned_cols=55  Identities=9%  Similarity=0.063  Sum_probs=46.8

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      ...+.+++.+++.+++++|++++++++|||+.||++|++.+|+.+++-++....+
T Consensus       189 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k  243 (268)
T 3r4c_A          189 NVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQ  243 (268)
T ss_dssp             EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHH
T ss_pred             eeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHH
Confidence            3456777899999999999999999999999999999999999877666554433

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.56  E-value=2.5e-16  Score=133.67  Aligned_cols=97  Identities=11%  Similarity=0.190  Sum_probs=65.3

Q ss_pred             HHCCCeEEEEeCCChhhHHHHHHHHhC-CccccCcceEEeCCC----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          192 KAAGKKVAVCSAATKSSVILCLENLIG-MERFEGLDCFLAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       192 ~~~g~~i~i~S~~~~~~~~~~l~~~~~-l~~~~~fd~v~~~~~----~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      ...++...++++..........+.+.. ....  +..++++..    .+.+.+++.+++.+++++|++++++++|||+.|
T Consensus       159 ~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~N  236 (285)
T 3pgv_A          159 DPQGISKVFFTCEDHEHLLPLEQAMNARWGDR--VNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMN  236 (285)
T ss_dssp             CCSSEEEEEEECSCHHHHHHHHHHHHHHHGGG--EEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred             CCCCceEEEEeCCCHHHHHHHHHHHHHHhcCC--EEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHh
Confidence            344555566665555544444433311 1111  344443332    345667899999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcCCCchhHh
Q 022348          267 GLQAATRAGMACVITYTSSTAEQV  290 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~~~~~~~~  290 (298)
                      |++|++.+|+.+++-++....++.
T Consensus       237 Di~ml~~ag~~vAm~Na~~~vk~~  260 (285)
T 3pgv_A          237 DAEMLSMAGKGCIMANAHQRLKDL  260 (285)
T ss_dssp             GHHHHHHSSEEEECTTSCHHHHHH
T ss_pred             hHHHHHhcCCEEEccCCCHHHHHh
Confidence            999999999887776666555444

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.51  E-value=8.3e-14  Score=118.94  Aligned_cols=99  Identities=15%  Similarity=0.090  Sum_probs=83.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhh---HHHHHHH--------HhCCccccCcceEEeCCCCCCCCCCHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLEN--------LIGMERFEGLDCFLAGDDVKQKKPDPSIYVT  246 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~---~~~~l~~--------~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~  246 (298)
                      ..++||+.++|+.|+++|++++|+||.....   +...++.        + ++  .  |+.++++++. ..||+|+++..
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~-~~--~--~~~~~~~~~~-~~kp~p~~~~~  260 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIA-GV--P--LVMQCQREQG-DTRKDDVVKEE  260 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTT-CC--C--CSEEEECCTT-CCSCHHHHHHH
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhccccccccc-CC--C--chheeeccCC-CCcHHHHHHHH
Confidence            3579999999999999999999999997543   3555666        5 77  3  7888887765 46999999999


Q ss_pred             HHHHhCCCCCc-EEEEecChhhHHHHHHcCCeEEEEc
Q 022348          247 AAKRLGISEKD-CLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       247 ~~~~lgi~~~~-~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      ++++++..+.+ |+||||+.+|+++|+++|+.++.+.
T Consensus       261 ~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~  297 (301)
T 1ltq_A          261 IFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA  297 (301)
T ss_dssp             HHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred             HHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEec
Confidence            99999887644 7999999999999999999998553

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.44  E-value=1.1e-13  Score=117.53  Aligned_cols=45  Identities=22%  Similarity=0.225  Sum_probs=39.9

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      .+-.+..+++.+++++|+++++|++|||+.||++|++.+|+.+++
T Consensus       213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~  257 (288)
T 1nrw_A          213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM  257 (288)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEE
Confidence            344667899999999999999999999999999999999996544

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.42  E-value=4.2e-13  Score=109.85  Aligned_cols=47  Identities=9%  Similarity=-0.021  Sum_probs=41.4

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      .+.+++..++.+++++|++++++++|||+.||++|++.+|+.+++.+
T Consensus       150 ~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n  196 (227)
T 1l6r_A          150 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPAN  196 (227)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTT
T ss_pred             CCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecC
Confidence            44677889999999999999999999999999999999999855533

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=99.40  E-value=2.2e-12  Score=108.20  Aligned_cols=47  Identities=13%  Similarity=0.150  Sum_probs=41.8

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      ..+.+++.+++.+++++|+++++|++|||+.||++|++.+|+.+++.
T Consensus       186 ~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~  232 (268)
T 1nf2_A          186 PKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME  232 (268)
T ss_dssp             CTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT
T ss_pred             CCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec
Confidence            45567788999999999999999999999999999999999976543

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.35  E-value=7.7e-12  Score=103.10  Aligned_cols=101  Identities=18%  Similarity=0.261  Sum_probs=72.6

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCCh----hhHHHHHHHHhCCccccCcc-eEEeCCCCCCCCCCHHHHHHHHHH
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATK----SSVILCLENLIGMERFEGLD-CFLAGDDVKQKKPDPSIYVTAAKR  250 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~----~~~~~~l~~~~~l~~~~~fd-~v~~~~~~~~~KP~~~~~~~~~~~  250 (298)
                      ....++||+.++|+.|+++|++++++||...    ......|+.+ |+..+  ++ .++....   ...+......+.++
T Consensus        98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~l-Gi~~~--~~~~Lilr~~---~~~K~~~r~~l~~~  171 (262)
T 3ocu_A           98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRL-GFNGV--EESAFYLKKD---KSAKAARFAEIEKQ  171 (262)
T ss_dssp             TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHH-TCSCC--SGGGEEEESS---CSCCHHHHHHHHHT
T ss_pred             CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHc-CcCcc--cccceeccCC---CCChHHHHHHHHhc
Confidence            3568999999999999999999999999865    4777888888 88765  31 3443322   23344555555544


Q ss_pred             hCCCCCcEEEEecChhhHHH--------HHH---------cCCeEEEEcCCC
Q 022348          251 LGISEKDCLVVEDSVIGLQA--------ATR---------AGMACVITYTSS  285 (298)
Q Consensus       251 lgi~~~~~~~vgD~~~Di~~--------a~~---------aG~~~v~~~~~~  285 (298)
                       |..  .+++|||..+|+.+        +++         -|...|+++++.
T Consensus       172 -Gy~--iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~  220 (262)
T 3ocu_A          172 -GYE--IVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN  220 (262)
T ss_dssp             -TEE--EEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTTTEEECCCSS
T ss_pred             -CCC--EEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCCCEEEeCCCC
Confidence             543  39999999999997        222         577778777654

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.33  E-value=1.9e-11  Score=100.59  Aligned_cols=100  Identities=18%  Similarity=0.274  Sum_probs=73.1

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCCh----hhHHHHHHHHhCCccccCcc--eEEeCCCCCCCCCCHHHHHHHHH
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATK----SSVILCLENLIGMERFEGLD--CFLAGDDVKQKKPDPSIYVTAAK  249 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~----~~~~~~l~~~~~l~~~~~fd--~v~~~~~~~~~KP~~~~~~~~~~  249 (298)
                      ....++||+.++|..|+++|++++++||...    ......|+.+ |+..+  ++  .++..+     ++.+......+.
T Consensus        98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~l-Gi~~~--~~~~Lilr~~-----~~~K~~~r~~L~  169 (260)
T 3pct_A           98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRL-GFTGV--NDKTLLLKKD-----KSNKSVRFKQVE  169 (260)
T ss_dssp             TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHH-TCCCC--STTTEEEESS-----CSSSHHHHHHHH
T ss_pred             CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHc-CcCcc--ccceeEecCC-----CCChHHHHHHHH
Confidence            4568999999999999999999999999865    4777889888 99865  43  444332     233344444444


Q ss_pred             HhCCCCCcEEEEecChhhHHH--------HHH---------cCCeEEEEcCCC
Q 022348          250 RLGISEKDCLVVEDSVIGLQA--------ATR---------AGMACVITYTSS  285 (298)
Q Consensus       250 ~lgi~~~~~~~vgD~~~Di~~--------a~~---------aG~~~v~~~~~~  285 (298)
                      +.|..  -+++|||+.+|+.+        +++         -|...|+++++.
T Consensus       170 ~~gy~--iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~  220 (260)
T 3pct_A          170 DMGYD--IVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNTQ  220 (260)
T ss_dssp             TTTCE--EEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred             hcCCC--EEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCCC
Confidence            54553  39999999999998        333         577888777654

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.32  E-value=1.1e-12  Score=111.05  Aligned_cols=48  Identities=15%  Similarity=0.217  Sum_probs=41.8

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      ..+-+++.+++.+++++|++++++++|||+.||++|++.+|+.+++.+
T Consensus       194 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n  241 (282)
T 1rkq_A          194 DKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDN  241 (282)
T ss_dssp             ETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT
T ss_pred             CCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecC
Confidence            345677889999999999999999999999999999999999654433

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.30  E-value=1.1e-13  Score=115.51  Aligned_cols=60  Identities=13%  Similarity=0.048  Sum_probs=48.5

Q ss_pred             cceEEeC---CCCCCCCCCHHHHHHHHHHhCCCC--CcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          225 LDCFLAG---DDVKQKKPDPSIYVTAAKRLGISE--KDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       225 fd~v~~~---~~~~~~KP~~~~~~~~~~~lgi~~--~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      ++.+.++   +..+. ++++.+++.+++++|+++  +++++|||+.||++|++.+|+.+++-+...
T Consensus       160 ~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~  224 (259)
T 3zx4_A          160 LEWTHGGRFYHAAKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP  224 (259)
T ss_dssp             CEEEECSSSEEEESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC
T ss_pred             cEEEecCceEEEcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh
Confidence            4555443   22345 788999999999999999  999999999999999999999976655543

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=99.29  E-value=2e-11  Score=109.31  Aligned_cols=100  Identities=20%  Similarity=0.224  Sum_probs=82.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCC-------------ccccCcceEEeCCCCCCCCCCHHH-
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM-------------ERFEGLDCFLAGDDVKQKKPDPSI-  243 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l-------------~~~~~fd~v~~~~~~~~~KP~~~~-  243 (298)
                      +...|++..+|.+||+.| ++.++||+....+...++.++|.             ..+  ||.|+...    .||.... 
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdl--FD~vI~~A----~KP~FF~~  317 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSY--FDLILVDA----RKPLFFGE  317 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGG--CSEEEESC----CTTGGGTT
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhh--CCEEEEeC----CCCCcccC
Confidence            456789999999999999 99999999999999999998663             345  89876543    4554332 


Q ss_pred             ---------------------------------HHHHHHHhCCCCCcEEEEecCh-hhHHHHH-HcCCeEEEEcCC
Q 022348          244 ---------------------------------YVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYTS  284 (298)
Q Consensus       244 ---------------------------------~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~-~aG~~~v~~~~~  284 (298)
                                                       +..+++.+|+.++++++|||.. .||..++ .+||.+++|--.
T Consensus       318 ~~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          318 GTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             CCCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             CCcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence                                             5889999999999999999999 6999997 899999966543

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.28  E-value=3.9e-13  Score=116.39  Aligned_cols=97  Identities=18%  Similarity=0.122  Sum_probs=63.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeC----CCC----------------CCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG----DDV----------------KQKK  238 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~----~~~----------------~~~K  238 (298)
                      .+.+++.++++.|++ |+.++++|+.....+....+.+ ++.     +.+...    ++.                ...+
T Consensus       103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~  175 (332)
T 1y8a_A          103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMI-GVR-----GELHGTEVDFDSIAVPEGLREELLSIIDVIASL  175 (332)
T ss_dssp             CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT-TCC-----SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhh-hhh-----hhhcccccchhhhccccccceeEEecCHHHHhh
Confidence            578999999999999 9999999988766666666554 542     222111    000                0001


Q ss_pred             CC---------------HHHHH----------HHHHHhCCCCCc----EEEEecChhhHHHHHHc----CCeEEEEcC
Q 022348          239 PD---------------PSIYV----------TAAKRLGISEKD----CLVVEDSVIGLQAATRA----GMACVITYT  283 (298)
Q Consensus       239 P~---------------~~~~~----------~~~~~lgi~~~~----~~~vgD~~~Di~~a~~a----G~~~v~~~~  283 (298)
                      +.               |..+.          +.....|+++++    |++|||+.||++|++.+    |+.+++ ++
T Consensus       176 ~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na  252 (332)
T 1y8a_A          176 SGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NG  252 (332)
T ss_dssp             CHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SC
T ss_pred             hhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cC
Confidence            11               11122          111112677888    99999999999999999    999766 54

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=99.22  E-value=5.9e-12  Score=107.42  Aligned_cols=49  Identities=16%  Similarity=0.095  Sum_probs=42.6

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      ..+-+++.+++.+++++|++++++++|||+.||++|++.+|+.+++.++
T Consensus       220 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na  268 (301)
T 2b30_A          220 KLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANA  268 (301)
T ss_dssp             ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTC
T ss_pred             CCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCC
Confidence            3456778999999999999999999999999999999999998654443

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.20  E-value=6.6e-13  Score=105.62  Aligned_cols=100  Identities=14%  Similarity=0.118  Sum_probs=88.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      +.++||+.++|++|++. ++++|+|++....++.+++.+ +...+  |+.+++++++...|   ..|.+.++++|.++++
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~l-d~~~~--f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~  139 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLL-DRWGV--FRARLFRESCVFHR---GNYVKDLSRLGRELSK  139 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH-CCSSC--EEEEECGGGCEEET---TEEECCGGGSSSCGGG
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHh-CCccc--EEEEEEcccceecC---CceeeeHhHhCCChhH
Confidence            46899999999999998 999999999999999999998 88877  89999888776555   5677888999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          258 CLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      |++|||+..++.++..+|+.++...+.
T Consensus       140 ~vivDDs~~~~~~~~~ngi~i~~~~~~  166 (195)
T 2hhl_A          140 VIIVDNSPASYIFHPENAVPVQSWFDD  166 (195)
T ss_dssp             EEEEESCGGGGTTCGGGEEECCCCSSC
T ss_pred             EEEEECCHHHhhhCccCccEEeeecCC
Confidence            999999999999999999997643333

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=99.17  E-value=2e-12  Score=112.13  Aligned_cols=52  Identities=21%  Similarity=0.200  Sum_probs=43.3

Q ss_pred             CCCCCCHHHHHHHHHHh----------------------CC-----CCCcEEEEecCh-hhHHHHHHcCCeEEEEcCCCc
Q 022348          235 KQKKPDPSIYVTAAKRL----------------------GI-----SEKDCLVVEDSV-IGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~l----------------------gi-----~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      ..+||++.+|+.+++.+                      |+     ++++++||||+. .|+.+|+++||.++++..+..
T Consensus       243 ~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~  322 (352)
T 3kc2_A          243 TLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVY  322 (352)
T ss_dssp             ECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSC
T ss_pred             EecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCC
Confidence            36899999999987654                      22     579999999999 599999999999998876543

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=99.08  E-value=9.5e-11  Score=97.13  Aligned_cols=48  Identities=6%  Similarity=-0.062  Sum_probs=41.6

Q ss_pred             CCCCHHHHHHHHHHhCC-CCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          237 KKPDPSIYVTAAKRLGI-SEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       237 ~KP~~~~~~~~~~~lgi-~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +-.+..+++.+++.+|+ .++++++|||+.||++|++.+|+.+++-++.
T Consensus       177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~  225 (249)
T 2zos_A          177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLK  225 (249)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCC
T ss_pred             CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCC
Confidence            45568899999999998 9999999999999999999999986665543

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=99.08  E-value=5.4e-12  Score=99.31  Aligned_cols=95  Identities=15%  Similarity=0.127  Sum_probs=84.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      +.++||+.++|+++++. ++++|+|++....++.+++.+ +...+  |+.++..++....|   ..|.+.++++|.++++
T Consensus        54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~l-d~~~~--f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~  126 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL-DKWGA--FRARLFRESCVFHR---GNYVKDLSRLGRDLRR  126 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH-CTTCC--EEEEECGGGSEEET---TEEECCGGGTCSCGGG
T ss_pred             EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHH-CCCCc--EEEEEeccCceecC---CcEeccHHHhCCCcce
Confidence            46899999999999998 999999999999999999998 88877  89888887665433   4567788999999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEE
Q 022348          258 CLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                      |++|||+..++.++..+|+.+.
T Consensus       127 ~vivdDs~~~~~~~~~ngi~i~  148 (181)
T 2ght_A          127 VLILDNSPASYVFHPDNAVPVA  148 (181)
T ss_dssp             EEEECSCGGGGTTCTTSBCCCC
T ss_pred             EEEEeCCHHHhccCcCCEeEec
Confidence            9999999999999999999964

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=99.07  E-value=7.5e-10  Score=91.42  Aligned_cols=48  Identities=13%  Similarity=0.114  Sum_probs=42.3

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      ..+-+++.+++.+++++|++++++++|||+.||++|++.+|+.+++-+
T Consensus       158 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~n  205 (244)
T 1s2o_A          158 PQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRN  205 (244)
T ss_dssp             ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTT
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcC
Confidence            456678899999999999999999999999999999999999755533

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=99.04  E-value=7.2e-09  Score=90.88  Aligned_cols=96  Identities=13%  Similarity=-0.044  Sum_probs=65.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCC-----C-------CC-CCCCCHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD-----D-------VK-QKKPDPSIYV  245 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~-----~-------~~-~~KP~~~~~~  245 (298)
                      +++||+.++++.|+++|++++|||++....++.+.+++ |+..-.+.+.|++..     +       .+ .+-.......
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~l-g~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~  299 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDT-NNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKV  299 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCT-TSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHH
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh-CcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchH
Confidence            47999999999999999999999999999999999887 653211123343321     0       00 0112223333


Q ss_pred             HHHHHh---CCCCCcEEEEecChhhHHHHHHcC
Q 022348          246 TAAKRL---GISEKDCLVVEDSVIGLQAATRAG  275 (298)
Q Consensus       246 ~~~~~l---gi~~~~~~~vgD~~~Di~~a~~aG  275 (298)
                      ..++++   .+....++++||+.+|+.|.+..+
T Consensus       300 ~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~  332 (385)
T 4gxt_A          300 QTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFD  332 (385)
T ss_dssp             HHHHHHTCCTTEECCSEEEECSGGGHHHHHHCT
T ss_pred             HHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCc
Confidence            344333   233456999999999999999843

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=99.02  E-value=4.5e-10  Score=94.45  Aligned_cols=57  Identities=9%  Similarity=-0.027  Sum_probs=43.9

Q ss_pred             CCCCCCHHHHHHHHHHhC-CCCCc--EEEEecChhhHHHHHHcCCeEEEEcCCCchhHhh
Q 022348          235 KQKKPDPSIYVTAAKRLG-ISEKD--CLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR  291 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~lg-i~~~~--~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~  291 (298)
                      ..+.++..+++.+++.+| +++++  +++|||+.||++|++.+|+..++-++....++++
T Consensus       185 ~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~  244 (275)
T 1xvi_A          185 DASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLH  244 (275)
T ss_dssp             ETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC-------
T ss_pred             cCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhc
Confidence            355677899999999999 99999  9999999999999999999865666654444443

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=99.00  E-value=9.5e-10  Score=93.52  Aligned_cols=98  Identities=15%  Similarity=0.104  Sum_probs=67.0

Q ss_pred             HhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeC----CC------------CCC
Q 022348          173 IKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG----DD------------VKQ  236 (298)
Q Consensus       173 ~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~----~~------------~~~  236 (298)
                      +......+.||+.++++.|+++|++++++|++....++.+++++ |+...  ...+++.    ++            ...
T Consensus       135 v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~-g~~~~--~~~i~~n~l~~~~~~~~~~~~~~~i~~~  211 (297)
T 4fe3_A          135 VADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQA-GVYHS--NVKVVSNFMDFDENGVLKGFKGELIHVF  211 (297)
T ss_dssp             HHTSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHT-TCCCT--TEEEEEECEEECTTSBEEEECSSCCCTT
T ss_pred             HHhcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHc-CCCcc--cceEEeeeEEEcccceeEeccccccchh
Confidence            33456789999999999999999999999999999999999998 77532  1112211    11            112


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHH
Q 022348          237 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATR  273 (298)
Q Consensus       237 ~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~  273 (298)
                      .|+.+..-.....++.-..++++++||+.||+.|++.
T Consensus       212 ~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~  248 (297)
T 4fe3_A          212 NKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADG  248 (297)
T ss_dssp             CHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTT
T ss_pred             hcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhC
Confidence            2322222222223344355789999999999999773

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=98.71  E-value=3.2e-07  Score=78.58  Aligned_cols=38  Identities=24%  Similarity=0.187  Sum_probs=35.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL  216 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~  216 (298)
                      .++|++.++++.|+++|++++|||.+....++.+.+.+
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~  180 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP  180 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence            58999999999999999999999999999998888764

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.49  E-value=3e-07  Score=86.10  Aligned_cols=91  Identities=15%  Similarity=0.154  Sum_probs=71.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      ++.|++.+.++.|++.|++++++|+.....+..+.+++ |++.+  +..+     .  ++.+.+    +++++.-. +++
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~l-gi~~~--~~~~-----~--P~~K~~----~v~~l~~~-~~v  521 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLDLV--IAEV-----L--PHQKSE----EVKKLQAK-EVV  521 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE--ECSC-----C--TTCHHH----HHHHHTTT-CCE
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCCEE--EEeC-----C--HHhHHH----HHHHHhhC-CeE
Confidence            47899999999999999999999999999999999998 88654  2211     1  233333    44455444 889


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +||||+.||+.|.+.+|+...+.++.
T Consensus       522 ~~vGDg~ND~~al~~A~vgiamg~g~  547 (645)
T 3j08_A          522 AFVGDGINDAPALAQADLGIAVGSGS  547 (645)
T ss_dssp             EEEECSSSCHHHHHHSSEEEEECCCS
T ss_pred             EEEeCCHhHHHHHHhCCEEEEeCCCc
Confidence            99999999999999999886665444

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=98.42  E-value=5.5e-07  Score=85.26  Aligned_cols=97  Identities=12%  Similarity=0.119  Sum_probs=75.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      ++.|++.+.+++|++.|++++++|+.....+..+.+++ |++.+  +.           .-.|+-...+++++.-..+.+
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~l-gi~~v--~a-----------~~~P~~K~~~v~~l~~~g~~V  619 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTL-GIKKV--VA-----------EIMPEDKSRIVSELKDKGLIV  619 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHH-TCCCE--EC-----------SCCHHHHHHHHHHHHHHSCCE
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCEE--EE-----------ecCHHHHHHHHHHHHhcCCEE
Confidence            47799999999999999999999999999999999998 88653  21           123444555555554456789


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      +||||+.||+.|.+.+|+...+.++....++
T Consensus       620 ~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~  650 (736)
T 3rfu_A          620 AMAGDGVNDAPALAKADIGIAMGTGTDVAIE  650 (736)
T ss_dssp             EEEECSSTTHHHHHHSSEEEEESSSCSHHHH
T ss_pred             EEEECChHhHHHHHhCCEEEEeCCccHHHHH
Confidence            9999999999999999999777655544443

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=98.36  E-value=3.1e-08  Score=78.67  Aligned_cols=94  Identities=11%  Similarity=0.095  Sum_probs=74.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc-cccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~-~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ...||+.++|+.+. +++.++|.|++....+..+++.+ +.. .+  |+..+..+.....   ...|.+-++.+|.++++
T Consensus        59 ~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~L-Dp~~~~--f~~rl~R~~c~~~---~g~y~KdL~~Lgrdl~~  131 (204)
T 3qle_A           59 AKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKL-DPIHAF--VSYNLFKEHCVYK---DGVHIKDLSKLNRDLSK  131 (204)
T ss_dssp             EECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHT-STTCSS--EEEEECGGGSEEE---TTEEECCGGGSCSCGGG
T ss_pred             EeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHh-CCCCCe--EEEEEEecceeEE---CCeeeecHHHhCCChHH
Confidence            68999999999998 66999999999999999999998 665 35  6766655433211   11244567888999999


Q ss_pred             EEEEecChhhHHHHHHcCCeEE
Q 022348          258 CLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                      |++|+|+++.+..-...|+.+.
T Consensus       132 vIiIDDsp~~~~~~p~N~I~I~  153 (204)
T 3qle_A          132 VIIIDTDPNSYKLQPENAIPME  153 (204)
T ss_dssp             EEEEESCTTTTTTCGGGEEECC
T ss_pred             EEEEECCHHHHhhCccCceEee
Confidence            9999999998877777787755

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=98.35  E-value=4.8e-07  Score=88.91  Aligned_cols=102  Identities=18%  Similarity=0.224  Sum_probs=72.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC--cceEEeCCCCCCC----------------CCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG--LDCFLAGDDVKQK----------------KPD  240 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~--fd~v~~~~~~~~~----------------KP~  240 (298)
                      ++.|++.+.++.|++.|++++++|+.....+..+.+++ |+.....  .+.++.+++...-                .-.
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~l-gi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~  681 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI-GIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE  681 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH-TSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc-CcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence            47899999999999999999999999999999999998 8864310  0223333221111                111


Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       241 ~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      |+-...+++.+.-..+.++|+||+.||+.|.+.|+++..+.
T Consensus       682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg  722 (995)
T 3ar4_A          682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG  722 (995)
T ss_dssp             SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET
T ss_pred             HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC
Confidence            22333444444334578999999999999999999997664

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.34  E-value=1e-06  Score=83.57  Aligned_cols=91  Identities=15%  Similarity=0.164  Sum_probs=70.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      ++.|++.+.++.|++.|++++++|+.....+..+.+++ |++.+  +.     +..  +..+.+    +++++.-. +++
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~l-gi~~~--~~-----~~~--P~~K~~----~v~~l~~~-~~v  599 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLDLV--IA-----EVL--PHQKSE----EVKKLQAK-EVV  599 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE--EC-----SCC--TTCHHH----HHHHHTTT-CCE
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCcEE--Ec-----cCC--HHHHHH----HHHHHhcC-CeE
Confidence            47899999999999999999999999999999999998 88643  21     111  222333    44444444 889


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +||||+.||+.|.+.||+...+.++.
T Consensus       600 ~~vGDg~ND~~al~~A~vgiamg~g~  625 (723)
T 3j09_A          600 AFVGDGINDAPALAQADLGIAVGSGS  625 (723)
T ss_dssp             EEEECSSTTHHHHHHSSEEEECCCCS
T ss_pred             EEEECChhhHHHHhhCCEEEEeCCCc
Confidence            99999999999999999886655444

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.17  E-value=1.8e-05  Score=70.29  Aligned_cols=103  Identities=15%  Similarity=0.156  Sum_probs=79.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHh------CCccccCcceEEeCCCCCCCCCC-----------
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI------GMERFEGLDCFLAGDDVKQKKPD-----------  240 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~------~l~~~~~fd~v~~~~~~~~~KP~-----------  240 (298)
                      +...|.+...|.+||++|.++.++||+.-..+...++.+.      |-+.-.-||.||+...    ||.           
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~----KP~FF~~~~~~~~v  260 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLAN----KPRFFYDNLRFLSV  260 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCC----TTHHHHSCCCEEEE
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCC----CCCcccCCCcceEE
Confidence            3456899999999999999999999999999999998886      3232222999887532    221           


Q ss_pred             --------------------HHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHH-cCCeEEEEcCC
Q 022348          241 --------------------PSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATR-AGMACVITYTS  284 (298)
Q Consensus       241 --------------------~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~-aG~~~v~~~~~  284 (298)
                                          .--...+.+.+|+...++++|||+. .||..++. .||.|+.+--.
T Consensus       261 ~~~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  326 (470)
T 4g63_A          261 NPENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  326 (470)
T ss_dssp             CTTTCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred             ECCCCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence                                0125667778899999999999999 59888776 69999865443

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=98.11  E-value=5.7e-06  Score=81.48  Aligned_cols=102  Identities=17%  Similarity=0.221  Sum_probs=72.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC----------------------cceEEeCCCC--
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG----------------------LDCFLAGDDV--  234 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~----------------------fd~v~~~~~~--  234 (298)
                      ++.|++.+.++.|++.|++++++|+.....+..+.+++ |+....+                      +..++.+.+.  
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l-gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~  677 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV-GIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD  677 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc-CCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence            36799999999999999999999999999999999998 8763100                      0122222111  


Q ss_pred             ----------------CCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          235 ----------------KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       235 ----------------~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                                      ...+..|+-...+.+.+.-..+.++|+||+.||+.|.+.|+++..+.
T Consensus       678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg  740 (1028)
T 2zxe_A          678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG  740 (1028)
T ss_dssp             CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEES
T ss_pred             CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeC
Confidence                            12233454444444433222367999999999999999999997764

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.99  E-value=2.4e-05  Score=58.26  Aligned_cols=35  Identities=9%  Similarity=0.058  Sum_probs=27.4

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHH
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE  214 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~  214 (298)
                      +.|++.++|+.|+++|++++++|+..........+
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~   59 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIE   59 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHH
Confidence            45689999999999999999999997443433333

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=97.99  E-value=2e-05  Score=77.72  Aligned_cols=110  Identities=15%  Similarity=0.175  Sum_probs=73.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC----------------------cceEEeCCCC--
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG----------------------LDCFLAGDDV--  234 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~----------------------fd~v~~~~~~--  234 (298)
                      ++.|++.+.+++|++.|++++++|+.....+..+.+++ |+..-..                      ...++.+.+.  
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~l-gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~  682 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASV-GIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD  682 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc-CCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence            47899999999999999999999999999999999888 7742100                      0112222111  


Q ss_pred             ----------------CCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE-cCCCchhH
Q 022348          235 ----------------KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT-YTSSTAEQ  289 (298)
Q Consensus       235 ----------------~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~-~~~~~~~~  289 (298)
                                      ....-.|+-...+.+.+.-..+.++++||+.||+.|.+.||++..+. ++....++
T Consensus       683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~  754 (1034)
T 3ixz_A          683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKN  754 (1034)
T ss_pred             CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHH
Confidence                            01122333333333333323356999999999999999999997765 55444443

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=97.90  E-value=1.9e-05  Score=76.43  Aligned_cols=102  Identities=15%  Similarity=0.079  Sum_probs=69.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcc---eEEeCCC--------------CCCCCCCH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD---CFLAGDD--------------VKQKKPDP  241 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd---~v~~~~~--------------~~~~KP~~  241 (298)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+++ |+.... ++   .++++++              .....-.|
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~l-GI~~~~-~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P  612 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQL-GLGTNI-YNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP  612 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHH-TSSCSC-CCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCS
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHc-CCCccc-cCccceeecCcccCCHHHHHHHHhhCeEEEEeCH
Confidence            47899999999999999999999999999999999998 885310 00   0111100              00111222


Q ss_pred             HHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       242 ~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      +-...+.+.+.-..+.+.|+||+.||..|.+.|+++..+.+
T Consensus       613 ~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~  653 (920)
T 1mhs_A          613 QHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEG  653 (920)
T ss_dssp             THHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETT
T ss_pred             HHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccccc
Confidence            23333333332223679999999999999999999977643

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=97.87  E-value=0.00035  Score=55.86  Aligned_cols=91  Identities=13%  Similarity=0.132  Sum_probs=68.0

Q ss_pred             CCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHc
Q 022348          195 GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA  274 (298)
Q Consensus       195 g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~a  274 (298)
                      +..-++||++.-......+=. .++..+++.+.|+++-.++    +..+|+.+.+++| +.-.-++|||+...-++|+..
T Consensus       176 ~~vNVLVTs~qLVPaLaK~LL-ygL~~~fpieNIYSa~kiG----KesCFerI~~RFG-~k~~yvvIGDG~eEe~AAk~~  249 (274)
T 3geb_A          176 NCVNVLVTTTQLIPALAKVLL-YGLGSVFPIENIYSATKTG----KESCFERIMQRFG-RKAVYVVIGDGVEEEQGAKKH  249 (274)
T ss_dssp             TEEEEEEESSCHHHHHHHHHH-TTCTTTSCGGGEEETTTTC----HHHHHHHHHHHHC-TTSEEEEEESSHHHHHHHHHT
T ss_pred             ceeEEEEecCchHHHHHHHHH-hhcccceecccccchhhcC----HHHHHHHHHHHhC-CCceEEEECCCHHHHHHHHHc
Confidence            444567777765444444433 4999998888999987654    4789999999998 446778999999999999999


Q ss_pred             CCeEEEEcCCCchhHhh
Q 022348          275 GMACVITYTSSTAEQVR  291 (298)
Q Consensus       275 G~~~v~~~~~~~~~~~~  291 (298)
                      +|+.+-+........+.
T Consensus       250 n~PFwrI~~h~Dl~~l~  266 (274)
T 3geb_A          250 NMPFWRISCHADLEALR  266 (274)
T ss_dssp             TCCEEECCSHHHHHHHH
T ss_pred             CCCeEEeecCccHHHHH
Confidence            99988776655544443

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.76  E-value=4.8e-05  Score=55.60  Aligned_cols=29  Identities=21%  Similarity=0.329  Sum_probs=24.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChh
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKS  207 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~  207 (298)
                      .+.+++.+++++|+++|++++++|+....
T Consensus        24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~   52 (126)
T 1xpj_A           24 LPRLDVIEQLREYHQLGFEIVISTARNMR   52 (126)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence            36678889999999999999999998754

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=97.74  E-value=7.9e-06  Score=78.92  Aligned_cols=102  Identities=17%  Similarity=0.070  Sum_probs=69.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCC-----------------CCCCCCH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDV-----------------KQKKPDP  241 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~-----------------~~~KP~~  241 (298)
                      ++.|++.+.+++|++.|+++.++|+.....+..+.+++ |+..-..-+.++.+.+.                 ....-.|
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~l-Gi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P  566 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-GMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP  566 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTT-TCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHh-CCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence            46899999999999999999999999999899999888 88421000111111100                 0122334


Q ss_pred             HHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       242 ~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      +-...+.+.+.-..+.+.|+||+.||..|.+.|+++..+.
T Consensus       567 ~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg  606 (885)
T 3b8c_A          567 EHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA  606 (885)
T ss_dssp             HHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS
T ss_pred             HHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC
Confidence            4333333333222367999999999999999999996664

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.65  E-value=8.9e-05  Score=60.84  Aligned_cols=29  Identities=7%  Similarity=-0.160  Sum_probs=23.7

Q ss_pred             CCCcEEEEecC----hhhHHHHHHcCCeEEEEc
Q 022348          254 SEKDCLVVEDS----VIGLQAATRAGMACVITY  282 (298)
Q Consensus       254 ~~~~~~~vgD~----~~Di~~a~~aG~~~v~~~  282 (298)
                      +++++++|||+    .||++|.+.+|.-.+.+.
T Consensus       198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~  230 (246)
T 3f9r_A          198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT  230 (246)
T ss_dssp             TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS
T ss_pred             CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC
Confidence            47899999995    999999999886555444

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=97.61  E-value=1.4e-05  Score=68.04  Aligned_cols=99  Identities=11%  Similarity=0.161  Sum_probs=67.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcc--eEEeCCC-CC-CCCCCHHHHHHHHHHh---
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD--CFLAGDD-VK-QKKPDPSIYVTAAKRL---  251 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd--~v~~~~~-~~-~~KP~~~~~~~~~~~l---  251 (298)
                      ..+||+.++|+.+.+. +.++|.|.+....+..+++.+ +......|.  .+...+. +. ..+..+..|.+-++.+   
T Consensus       164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~L-d~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~  241 (320)
T 3shq_A          164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLL-GVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWAL  241 (320)
T ss_dssp             HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHT-TCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHH
T ss_pred             EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHh-CCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcc
Confidence            3889999999999965 999999999999999999998 554331122  1222211 10 0011111233355666   


Q ss_pred             --CCCCCcEEEEecChhhHHHHHHcCCeEE
Q 022348          252 --GISEKDCLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       252 --gi~~~~~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                        |.+++++++|+|++.-.......|+...
T Consensus       242 ~p~rdl~~tIiIDdsp~~~~~~p~NgI~I~  271 (320)
T 3shq_A          242 YKQYNSSNTIMFDDIRRNFLMNPKSGLKIR  271 (320)
T ss_dssp             CTTCCGGGEEEEESCGGGGTTSGGGEEECC
T ss_pred             cCCCChhHEEEEeCChHHhccCcCceEEeC
Confidence              8899999999999998888777776644

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=97.24  E-value=0.00056  Score=59.28  Aligned_cols=81  Identities=15%  Similarity=0.200  Sum_probs=64.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc-ccCcc-eEEeCCCCCCCCCCHHHHHHHHHHh-CCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLD-CFLAGDDVKQKKPDPSIYVTAAKRL-GIS  254 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~-~~~fd-~v~~~~~~~~~KP~~~~~~~~~~~l-gi~  254 (298)
                      +.++||+.++|+.+. .++.++|.|++....+..+++.+ +... +  |+ .+++.++.+.      .|.+-++++ |.+
T Consensus        74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~L-Dp~~~~--f~~ri~sr~~~g~------~~~KdL~~L~~~d  143 (372)
T 3ef0_A           74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKII-DPTGKL--FQDRVLSRDDSGS------LAQKSLRRLFPCD  143 (372)
T ss_dssp             EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHH-CTTSCS--SSSCEECTTTSSC------SSCCCGGGTCSSC
T ss_pred             EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHh-ccCCce--eeeEEEEecCCCC------cceecHHHhcCCC
Confidence            578999999999999 66999999999999999999998 6665 6  66 6776665442      122345655 999


Q ss_pred             CCcEEEEecChhhH
Q 022348          255 EKDCLVVEDSVIGL  268 (298)
Q Consensus       255 ~~~~~~vgD~~~Di  268 (298)
                      +++|++|+|++.-.
T Consensus       144 l~~viiiDd~~~~~  157 (372)
T 3ef0_A          144 TSMVVVIDDRGDVW  157 (372)
T ss_dssp             CTTEEEEESCSGGG
T ss_pred             CceEEEEeCCHHHc
Confidence            99999999999644

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=96.66  E-value=0.0022  Score=52.18  Aligned_cols=37  Identities=8%  Similarity=0.012  Sum_probs=29.2

Q ss_pred             HHHHHHHHHhCCCCCcEEEEecChhhHHHHHHc--CCeEEEEcC
Q 022348          242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA--GMACVITYT  283 (298)
Q Consensus       242 ~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~a--G~~~v~~~~  283 (298)
                      .+.+.+++++|     +++|||+.||++|.+.+  |...++-+.
T Consensus       163 ~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~Na  201 (239)
T 1u02_A          163 SAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGEG  201 (239)
T ss_dssp             HHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESSS
T ss_pred             HHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECCC
Confidence            34455555555     89999999999999999  999877665

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.48  E-value=0.00084  Score=54.81  Aligned_cols=40  Identities=8%  Similarity=-0.205  Sum_probs=30.7

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEec----ChhhHHHHHHcCCeEE
Q 022348          237 KKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACV  279 (298)
Q Consensus       237 ~KP~~~~~~~~~~~lgi~~~~~~~vgD----~~~Di~~a~~aG~~~v  279 (298)
                      +-.+..+++.+   +|++++++++|||    +.||++|.+.+|...+
T Consensus       186 ~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~  229 (246)
T 2amy_A          186 GWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGY  229 (246)
T ss_dssp             TCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEE
T ss_pred             CCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceE
Confidence            33445566666   8999999999999    9999999999997444

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.24  E-value=0.0056  Score=50.37  Aligned_cols=52  Identities=6%  Similarity=-0.166  Sum_probs=38.8

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEec----ChhhHHHHHHcCCeEEEEcCCCchhHhhh
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITYTSSTAEQVRI  292 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD----~~~Di~~a~~aG~~~v~~~~~~~~~~~~~  292 (298)
                      .+-.+..+++.+   +|++++++++|||    +.||++|.+.+|...+.+  .+..+++++
T Consensus       194 ~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av--~NA~~~~k~  249 (262)
T 2fue_A          194 EGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV--VSPQDTVQR  249 (262)
T ss_dssp             TTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC--SSHHHHHHH
T ss_pred             CCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe--cCCCHHHHH
Confidence            344456788777   8999999999999    999999999999754544  333444443

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=95.89  E-value=0.0023  Score=52.74  Aligned_cols=43  Identities=12%  Similarity=0.180  Sum_probs=26.1

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcC--CCCCCCcccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFN--VRCDPSSQQS  107 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~  107 (298)
                      .++|+|+||+||||++..........++++++.  +.....+++.
T Consensus        11 ~~~kli~~DlDGTLl~~~~~is~~~~~al~~l~~~i~v~iaTGR~   55 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSD   55 (262)
T ss_dssp             --CEEEEEESBTTTBSTTSCCCHHHHHHHHHHTTTSEEEEECSSC
T ss_pred             cCeEEEEEeCccCCCCCCCcCCHHHHHHHHHHHhCCEEEEEcCCC
Confidence            368999999999999976433333444443321  5555566654

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=95.88  E-value=0.0025  Score=53.09  Aligned_cols=102  Identities=18%  Similarity=0.196  Sum_probs=62.3

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCC---ChhhHHHHHHHHhCCc-cccCcceEEeCCCCC-----CCCCC-------HHH
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAA---TKSSVILCLENLIGME-RFEGLDCFLAGDDVK-----QKKPD-------PSI  243 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~---~~~~~~~~l~~~~~l~-~~~~fd~v~~~~~~~-----~~KP~-------~~~  243 (298)
                      ++|++.+.|++|+++|++++++||+   ........++.+ ++. ..  ++.++++....     ..+|.       .+.
T Consensus        31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~l-g~~~~~--~~~ii~~~~~~~~~l~~~~~~~v~~~lg~~~  107 (284)
T 2hx1_A           31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKL-GLFSIT--ADKIISSGMITKEYIDLKVDGGIVAYLGTAN  107 (284)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHT-TCTTCC--GGGEEEHHHHHHHHHHHHCCSEEEEEESCHH
T ss_pred             eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHC-CcCCCC--HhhEEcHHHHHHHHHHhhcCCcEEEEecCHH
Confidence            6789999999999999999999984   445566677776 776 44  45565542110     01222       112


Q ss_pred             HHHHHHHhCCC-------------CCcEEEEecChh-----hHH----HHHHcCCeEEEEcCC
Q 022348          244 YVTAAKRLGIS-------------EKDCLVVEDSVI-----GLQ----AATRAGMACVITYTS  284 (298)
Q Consensus       244 ~~~~~~~lgi~-------------~~~~~~vgD~~~-----Di~----~a~~aG~~~v~~~~~  284 (298)
                      +...++++|+.             ..+++++|+..+     ++.    ..+..|+..++.++.
T Consensus       108 l~~~l~~~G~~~~~~~~~~~~~~~~~~avv~~~~~~~~~~~~~~~l~~~L~~~g~~~i~tn~~  170 (284)
T 2hx1_A          108 SANYLVSDGIKMLPVSAIDDSNIGEVNALVLLDDEGFNWFHDLNKTVNLLRKRTIPAIVANTD  170 (284)
T ss_dssp             HHHTTCBTTEEEEEGGGCCTTTGGGEEEEEECCSSSSCHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred             HHHHHHHCCCeeccCCCCCcccCCCCCEEEEeCCCCcCccccHHHHHHHHhcCCCeEEEECCC
Confidence            35556666662             346677776542     222    345679885555543

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=95.88  E-value=0.0057  Score=49.63  Aligned_cols=14  Identities=21%  Similarity=0.679  Sum_probs=12.4

Q ss_pred             ccEEEEecCCcccc
Q 022348           67 LQALIFDCDGVIIE   80 (298)
Q Consensus        67 ~k~viFD~DGTL~d   80 (298)
                      +++|+||+||||++
T Consensus         1 ikli~~DlDGTLl~   14 (239)
T 1u02_A            1 MSLIFLDYDGTLVP   14 (239)
T ss_dssp             -CEEEEECBTTTBC
T ss_pred             CeEEEEecCCCCcC
Confidence            57899999999997

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=95.58  E-value=0.047  Score=47.01  Aligned_cols=86  Identities=10%  Similarity=0.024  Sum_probs=60.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCCh---hhHHHHHH-HHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATK---SSVILCLE-NLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~---~~~~~~l~-~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      .+.||+.++|+.|++.|+++.++||+..   ......+. .+ |+.--  .+.|+++...-.     .    .++    .
T Consensus        29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~l-gi~~~--~~~i~ts~~~~~-----~----~~~----~   92 (352)
T 3kc2_A           29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKL-DVDVS--PLQIIQSHTPYK-----S----LVN----K   92 (352)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHH-TSCCC--GGGEECTTGGGG-----G----GTT----T
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhc-CCCCC--hhhEeehHHHHH-----H----HHh----c
Confidence            5789999999999999999999999863   33334454 45 87643  677887643110     0    111    2


Q ss_pred             CCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          255 EKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       255 ~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      .+.+++||-. .-.+.++.+|+..+..
T Consensus        93 ~~~v~viG~~-~l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A           93 YSRILAVGTP-SVRGVAEGYGFQDVVH  118 (352)
T ss_dssp             CSEEEEESST-THHHHHHHHTCSEEEE
T ss_pred             CCEEEEECCH-HHHHHHHhCCCeEecc
Confidence            3678888855 6677889999998754

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=95.58  E-value=0.02  Score=50.49  Aligned_cols=79  Identities=15%  Similarity=0.197  Sum_probs=60.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc-ccCcce-EEeCCCCCCCCCCHHHHHHHHHHh-CCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDC-FLAGDDVKQKKPDPSIYVTAAKRL-GIS  254 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~-~~~fd~-v~~~~~~~~~KP~~~~~~~~~~~l-gi~  254 (298)
                      +..+||+.++|+.+. ..+.++|.|.+....+..+++.+ +... +  |.. +++.++.+..      |.+-++++ |.+
T Consensus        82 V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~L-Dp~~~~--f~~Rl~sRd~cg~~------~~KdL~~ll~rd  151 (442)
T 3ef1_A           82 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKII-DPTGKL--FQDRVLSRDDSGSL------AQKSLRRLFPCD  151 (442)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHH-CTTSTT--TTTCEECTTTSSCS------SCCCGGGTCSSC
T ss_pred             EEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHh-ccCCcc--ccceEEEecCCCCc------eeeehHHhcCCC
Confidence            578999999999999 55999999999999999999998 5554 5  554 6655554421      11134444 889


Q ss_pred             CCcEEEEecChh
Q 022348          255 EKDCLVVEDSVI  266 (298)
Q Consensus       255 ~~~~~~vgD~~~  266 (298)
                      .+.+++|+|++.
T Consensus       152 l~~vvIIDd~p~  163 (442)
T 3ef1_A          152 TSMVVVIDDRGD  163 (442)
T ss_dssp             CTTEEEEESCSG
T ss_pred             cceEEEEECCHH
Confidence            999999999985

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=94.85  E-value=0.005  Score=50.10  Aligned_cols=43  Identities=12%  Similarity=0.262  Sum_probs=27.8

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcC--CCCCCCcccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFN--VRCDPSSQQS  107 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~  107 (298)
                      +++|+|+||+||||++......+...++++++.  +.....++|.
T Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~i~v~iaTGR~   48 (246)
T 2amy_A            4 PGPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSD   48 (246)
T ss_dssp             CCSEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTTSEEEEECSSC
T ss_pred             CCceEEEEECCCCcCCCCcccCHHHHHHHHHHHhCCeEEEEcCCC
Confidence            468999999999999976433334444444321  5555666664

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=94.22  E-value=0.16  Score=41.39  Aligned_cols=85  Identities=14%  Similarity=0.139  Sum_probs=56.2

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHH--hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      +.|++.+.+++|+++|++++++||+.........+++  .|+...  .+.++++.         ......+++.. ...+
T Consensus        18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~--~~~i~~~~---------~~~~~~l~~~~-~~~~   85 (263)
T 1zjj_A           18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVS--SSIIITSG---------LATRLYMSKHL-DPGK   85 (263)
T ss_dssp             ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCC--GGGEEEHH---------HHHHHHHHHHS-CCCC
T ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC--hhhEEecH---------HHHHHHHHHhC-CCCE
Confidence            4589999999999999999999998876555555554  155422  35555431         23334444442 3367


Q ss_pred             EEEEecChhhHHHHHHcCCe
Q 022348          258 CLVVEDSVIGLQAATRAGMA  277 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~  277 (298)
                      ++++|+. ...+.++..|+.
T Consensus        86 v~viG~~-~l~~~l~~~G~~  104 (263)
T 1zjj_A           86 IFVIGGE-GLVKEMQALGWG  104 (263)
T ss_dssp             EEEESCH-HHHHHHHHHTSC
T ss_pred             EEEEcCH-HHHHHHHHcCCe
Confidence            8888874 566677777774

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=91.86  E-value=0.25  Score=40.18  Aligned_cols=48  Identities=25%  Similarity=0.324  Sum_probs=36.0

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCC---ChhhHHHHHHHHhCCccccCcceEEe
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAA---TKSSVILCLENLIGMERFEGLDCFLA  230 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~---~~~~~~~~l~~~~~l~~~~~fd~v~~  230 (298)
                      +.|++.++|++++++|++++++||+   ....+...++.+ |+...  .+.+++
T Consensus        25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~l-g~~~~--~~~ii~   75 (268)
T 3qgm_A           25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSF-GLEVG--EDEILV   75 (268)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHT-TCCCC--GGGEEE
T ss_pred             eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHC-CCCCC--HHHeeC
Confidence            6689999999999999999999994   445555667666 76533  345554

>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1

Probab=90.63  E-value=3.6  Score=33.28  Aligned_cols=94  Identities=14%  Similarity=0.151  Sum_probs=63.0

Q ss_pred             CCChhHHHHHH---HHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEe-CCCCCCC--CCCHHHHHHHHHHhC
Q 022348          179 EPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA-GDDVKQK--KPDPSIYVTAAKRLG  252 (298)
Q Consensus       179 ~~~pg~~~~l~---~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~-~~~~~~~--KP~~~~~~~~~~~lg  252 (298)
                      .++|+..++++   .|.+.|+++..+++.+....+ .++.+ |      .+.+.- +..++.+  -.+++.++.+.+..+
T Consensus       116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~ak-rl~~~-G------~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~  187 (265)
T 1wv2_A          116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIAR-QLAEI-G------CIAVMPLAGLIGSGLGICNPYNLRIILEEAK  187 (265)
T ss_dssp             TCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHH-HHHHS-C------CSEEEECSSSTTCCCCCSCHHHHHHHHHHCS
T ss_pred             ccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHh-C------CCEEEeCCccCCCCCCcCCHHHHHHHHhcCC
Confidence            45677777665   566669999976777766443 44444 3      244444 4445544  356888888888766


Q ss_pred             CCCCcEEEEe---cChhhHHHHHHcCCeEEEEcCC
Q 022348          253 ISEKDCLVVE---DSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       253 i~~~~~~~vg---D~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      ++    +.++   .++.|+..+...|+..|++++.
T Consensus       188 vP----VI~eGGI~TPsDAa~AmeLGAdgVlVgSA  218 (265)
T 1wv2_A          188 VP----VLVDAGVGTASDAAIAMELGCEAVLMNTA  218 (265)
T ss_dssp             SC----BEEESCCCSHHHHHHHHHHTCSEEEESHH
T ss_pred             CC----EEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence            64    4555   5557999999999999988763

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=89.89  E-value=0.053  Score=44.08  Aligned_cols=43  Identities=12%  Similarity=0.144  Sum_probs=29.5

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHH---hhcCCCCCCCcccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAF---SHFNVRCDPSSQQS  107 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~  107 (298)
                      |++|+|+||+||||+++.........+++   ++.|+.....++++
T Consensus         2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~iaTGR~   47 (246)
T 3f9r_A            2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGSD   47 (246)
T ss_dssp             CCSEEEEECSBTTTBSTTSCCCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCceEEEEeCcCCcCCCCCccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            36899999999999998643333344444   34577777767665

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=89.76  E-value=0.84  Score=35.54  Aligned_cols=90  Identities=17%  Similarity=0.258  Sum_probs=56.1

Q ss_pred             hHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEe
Q 022348          183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVE  262 (298)
Q Consensus       183 g~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vg  262 (298)
                      ++.+.|...++.+-++++++-......-..+..+++++    +.......     .-+.+..-.-+++-|++    ++||
T Consensus        82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~----i~~~~~~~-----~~e~~~~i~~l~~~G~~----vvVG  148 (196)
T 2q5c_A           82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVK----IKEFLFSS-----EDEITTLISKVKTENIK----IVVS  148 (196)
T ss_dssp             HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCE----EEEEEECS-----GGGHHHHHHHHHHTTCC----EEEE
T ss_pred             HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCc----eEEEEeCC-----HHHHHHHHHHHHHCCCe----EEEC
Confidence            56777778888888999998766544444455554665    22221111     11112222233445774    6999


Q ss_pred             cChhhHHHHHHcCCeEEEEcCCCc
Q 022348          263 DSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       263 D~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      |+.. ...|++.|++++++.++..
T Consensus       149 ~~~~-~~~A~~~Gl~~vli~sg~e  171 (196)
T 2q5c_A          149 GKTV-TDEAIKQGLYGETINSGEE  171 (196)
T ss_dssp             CHHH-HHHHHHTTCEEEECCCCHH
T ss_pred             CHHH-HHHHHHcCCcEEEEecCHH
Confidence            8776 8889999999998887543

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=88.63  E-value=0.79  Score=37.11  Aligned_cols=38  Identities=11%  Similarity=0.082  Sum_probs=29.4

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCC---hhhHHHHHHHHhCCc
Q 022348          182 PGVLRLMDEAKAAGKKVAVCSAAT---KSSVILCLENLIGME  220 (298)
Q Consensus       182 pg~~~~l~~L~~~g~~i~i~S~~~---~~~~~~~l~~~~~l~  220 (298)
                      |++.+.|++|+++|++++++||+.   ...+...++.+ |+.
T Consensus        25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~l-g~~   65 (266)
T 3pdw_A           25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSF-DIP   65 (266)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHT-TCC
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCC
Confidence            578899999999999999999944   44455566666 664

>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1

Probab=86.60  E-value=3.4  Score=32.84  Aligned_cols=84  Identities=18%  Similarity=0.228  Sum_probs=53.0

Q ss_pred             hHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHH---HhCCCCCcEE
Q 022348          183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAK---RLGISEKDCL  259 (298)
Q Consensus       183 g~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~---~lgi~~~~~~  259 (298)
                      ++...|...++.+-++++++-......-..+..+++++    ++....        -+++-.+.+++   +-|++    +
T Consensus        94 Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~----i~~~~~--------~~~ee~~~~i~~l~~~G~~----v  157 (225)
T 2pju_A           94 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLR----LDQRSY--------ITEEDARGQINELKANGTE----A  157 (225)
T ss_dssp             HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCC----EEEEEE--------SSHHHHHHHHHHHHHTTCC----E
T ss_pred             HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCc----eEEEEe--------CCHHHHHHHHHHHHHCCCC----E
Confidence            45666666666778999998776554444555554664    222211        11222233333   44764    6


Q ss_pred             EEecChhhHHHHHHcCCeEEEEcC
Q 022348          260 VVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       260 ~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      +|||+.. ...|++.|++++++.+
T Consensus       158 VVG~~~~-~~~A~~~Gl~~vlI~s  180 (225)
T 2pju_A          158 VVGAGLI-TDLAEEAGMTGIFIYS  180 (225)
T ss_dssp             EEESHHH-HHHHHHTTSEEEESSC
T ss_pred             EECCHHH-HHHHHHcCCcEEEECC
Confidence            9998876 8889999999998885

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=85.94  E-value=1.5  Score=35.98  Aligned_cols=41  Identities=27%  Similarity=0.330  Sum_probs=35.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+.+...+.|++|+++|++++++|+.....+...++.+ ++.
T Consensus        22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l-~l~   62 (282)
T 1rkq_A           22 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKEL-HME   62 (282)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHT-TCC
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh-CCC
Confidence            46678889999999999999999999988888888887 765

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=85.44  E-value=0.85  Score=36.97  Aligned_cols=46  Identities=20%  Similarity=0.274  Sum_probs=32.4

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCChh---hHHHHHHHHhCCccccCcceEEe
Q 022348          182 PGVLRLMDEAKAAGKKVAVCSAATKS---SVILCLENLIGMERFEGLDCFLA  230 (298)
Q Consensus       182 pg~~~~l~~L~~~g~~i~i~S~~~~~---~~~~~l~~~~~l~~~~~fd~v~~  230 (298)
                      |++.++|++++++|++++++||+...   .+...++.+ |+...  .+.+++
T Consensus        24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~l-g~~~~--~~~ii~   72 (264)
T 3epr_A           24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGF-NVETP--LETIYT   72 (264)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTT-TCCCC--GGGEEE
T ss_pred             cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHC-CCCCC--hhheec
Confidence            79999999999999999999975433   344455555 55432  344444

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=83.27  E-value=1.8  Score=35.97  Aligned_cols=41  Identities=24%  Similarity=0.428  Sum_probs=32.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCC---hhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAAT---KSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~---~~~~~~~l~~~~~l~  220 (298)
                      .++|++.+.++.|+++|++++++||+.   .......++.+ ++.
T Consensus        37 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~-g~~   80 (306)
T 2oyc_A           37 RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARL-GFG   80 (306)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHT-TCC
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhc-CCC
Confidence            477899999999999999999999843   44455566665 665

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=82.66  E-value=1.6  Score=35.77  Aligned_cols=40  Identities=18%  Similarity=0.328  Sum_probs=34.7

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      +.+...+.|++|+++|++++++|+.....+...++.+ ++.
T Consensus        27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~   66 (275)
T 1xvi_A           27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTL-GLQ   66 (275)
T ss_dssp             SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHT-TCT
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCC
Confidence            3456789999999999999999999998888888887 765

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=81.95  E-value=2.3  Score=33.56  Aligned_cols=41  Identities=12%  Similarity=0.081  Sum_probs=35.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+.+...+.|++++++|++++++|+.....+...++.+ ++.
T Consensus        20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l-~~~   60 (231)
T 1wr8_A           20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILI-GTS   60 (231)
T ss_dssp             CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHH-TCC
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHc-CCC
Confidence            36678899999999999999999999988888888877 664

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=81.37  E-value=0.51  Score=40.75  Aligned_cols=17  Identities=35%  Similarity=0.429  Sum_probs=15.3

Q ss_pred             CccEEEEecCCccccch
Q 022348           66 SLQALIFDCDGVIIESE   82 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~   82 (298)
                      +.++++||+||||+++.
T Consensus        17 ~k~~LVlDLD~TLvhS~   33 (372)
T 3ef0_A           17 KRLSLIVDLDQTIIHAT   33 (372)
T ss_dssp             TCEEEEECCBTTTEEEE
T ss_pred             CCCEEEEcCCCCccccc
Confidence            57899999999999984

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=80.34  E-value=0.66  Score=36.09  Aligned_cols=17  Identities=18%  Similarity=0.432  Sum_probs=15.1

Q ss_pred             CccEEEEecCCccccch
Q 022348           66 SLQALIFDCDGVIIESE   82 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~   82 (298)
                      ..+++++|+||||+++.
T Consensus        27 ~k~~LVLDLD~TLvhs~   43 (195)
T 2hhl_A           27 GKKCVVIDLDETLVHSS   43 (195)
T ss_dssp             TCCEEEECCBTTTEEEE
T ss_pred             CCeEEEEccccceEccc
Confidence            56899999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	298
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	7e-24
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	2e-19
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	2e-18
d1swva_	257	c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba	3e-17
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	6e-17
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	2e-15
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	4e-15
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	7e-14
d2hcfa1	228	c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C	2e-13
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	3e-12
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	4e-12
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	5e-12
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	2e-11
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	5e-11
d1zrna_	220	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse	6e-11
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	1e-10
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	2e-10
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	9e-10
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	6e-09
d2ah5a1	210	c.108.1.6 (A:1-210) predicted phosphatase SP0104 {	1e-07
d2feaa1	226	c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio	4e-07
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	6e-07
d1nnla_	217	c.108.1.4 (A:) Phosphoserine phosphatase {Human (H	0.001

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.8 bits (234), Expect = 7e-24
 Identities = 29/225 (12%), Positives = 61/225 (27%), Gaps = 17/225 (7%)

Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
              FD DGV+         A+  +     +              +F            P 
Sbjct: 2   VAAFDLDGVLALPSIAG--AFRRSEEALAL------------PRDFLLGAYQTEFPEGPT 47

Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
            +    +  +       +       +A   +L +++   +      +        +L+  
Sbjct: 48  EQLMKGKITFSQWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAAR-SINRPMLQAA 106

Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLAGDDVKQKKPDPSIYVTA 247
              K  G    + +                M       D  +    V   KP+P IY   
Sbjct: 107 IALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFL 166

Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVR 291
              L     + + ++D    L+ A   GM  + +  T+S   ++ 
Sbjct: 167 LDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELE 211

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 83.3 bits (204), Expect = 2e-19
 Identities = 29/223 (13%), Positives = 59/223 (26%), Gaps = 10/223 (4%)

Query: 66  SLQALIFDCDGVIIESEHLHRQAYNDAF--------SHFNVRCDPSSQQSLNWDPEFYDV 117
            +  ++ D +G       +    +            +H+           L    E    
Sbjct: 6   EVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAH 65

Query: 118 LQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGT 177
           L   +                  + + +       D+             R         
Sbjct: 66  LDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMK 125

Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK 237
            E    V+  + + + AG KV + S+ +  +  L   +    +  E +D     D     
Sbjct: 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG--HFDTKIGH 183

Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280
           K +   Y   A  +G S  + L + D      AA  A +   +
Sbjct: 184 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAV 226

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (195), Expect = 2e-18
 Identities = 32/228 (14%), Positives = 65/228 (28%), Gaps = 17/228 (7%)

Query: 66  SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
           +L+A +FD DGV+            +                L       +    + G  
Sbjct: 1   TLRAAVFDLDGVLALPAVFGVLGRTEEA--------------LALPRGLLNDAFQKGGPE 46

Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
               R    E                  +   + L +++  +       S   +    +L
Sbjct: 47  GATTRLMKGEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISA-RKINRPML 105

Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLAGDDVKQKKPDPSIY 244
           +     +  G   A+ +                M   +   D  +    V   KP+P IY
Sbjct: 106 QAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIY 165

Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVR 291
                 L  S  + + ++D    L+ A   GM  + +  T +  +++ 
Sbjct: 166 KFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELE 213

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

 Score = 77.5 bits (189), Expect = 3e-17
 Identities = 35/223 (15%), Positives = 72/223 (32%), Gaps = 24/223 (10%)

Query: 67  LQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
           ++A+IF   G  ++       + + + F    V                 +  +  +G  
Sbjct: 2   IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITA-------------EEARKPMGLL 48

Query: 126 KPKMRWYFKEHGWPSSTI--FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
           K        E    +S          T+ D  ++ +  ++       +        P  G
Sbjct: 49  KIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPR-----YASPING 103

Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
           V  ++   +  G K+   +  T+  + +  +           D  +  DDV   +P P +
Sbjct: 104 VKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP--DFLVTPDDVPAGRPYPWM 161

Query: 244 YVTAAKRLGISEKD-CLVVEDSVIGLQAATRAGMACVITYTSS 285
               A  LG+   +  + V D+V  ++    AGM  V     S
Sbjct: 162 CYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGS 204

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 76.0 bits (185), Expect = 6e-17
 Identities = 37/229 (16%), Positives = 69/229 (30%), Gaps = 29/229 (12%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
            +A++FD DGVI ++   H +A+        +                 D LQ  +    
Sbjct: 2   FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLAD 61

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
            K+     +             + D   A +   I     +     IK            
Sbjct: 62  KKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPF 121

Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
           L++                             M      D      +V   KP P I++ 
Sbjct: 122 LLER----------------------------MNLTGYFDAIADPAEVAASKPAPDIFIA 153

Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVRIID 294
           AA  +G++  + + +EDS  G+QA   +G   + +       + + I+ 
Sbjct: 154 AAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVP 202

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 70.9 bits (172), Expect = 2e-15
 Identities = 33/209 (15%), Positives = 62/209 (29%), Gaps = 30/209 (14%)

Query: 71  IFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR 130
           IFD   VI++ +           +                       L+     G+   +
Sbjct: 4   IFDLGNVIVDIDFNRVLGAWSDLTRIP-----------------LASLKKSFHMGEAFHQ 46

Query: 131 WYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDE 190
               E G  S   F      +       +         +        V  RP V+ +M +
Sbjct: 47  H---ERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVF--------VALRPEVIAIMHK 95

Query: 191 AKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKR 250
            +  G +V V S   +       E    +      D      D+  +KP+  IY    + 
Sbjct: 96  LREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYLSQDLGMRKPEARIYQHVLQA 153

Query: 251 LGISEKDCLVVEDSVIGLQAATRAGMACV 279
            G S  D +  +D+   ++ A + G+  +
Sbjct: 154 EGFSPSDTVFFDDNADNIEGANQLGITSI 182

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 70.6 bits (171), Expect = 4e-15
 Identities = 38/229 (16%), Positives = 82/229 (35%), Gaps = 30/229 (13%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           + A IFD DG++I+SE L  +A  D  +   V            D    + L + +G   
Sbjct: 3   ILAAIFDMDGLLIDSEPLWDRAELDVMASLGV------------DISRRNELPDTLGLRI 50

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
             +   +      +                  ++++         + ++  + P      
Sbjct: 51  DMVVDLWYARQPWNGPSRQ-------------EVVERVIARAISLVEETRPLLPGV---- 93

Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
             +      ++  +   A+ S + +  + L   +  +  D   + + +   KP P +Y+ 
Sbjct: 94  -REAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLD 152

Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRIIDP 295
            A +LG+    C+ +EDSV G+ A+  A M  ++          R +  
Sbjct: 153 CAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLA 201

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 66.7 bits (161), Expect = 7e-14
 Identities = 26/223 (11%), Positives = 59/223 (26%), Gaps = 42/223 (18%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
              I+D  G ++++      A+ +  + + +                             
Sbjct: 4   HDYIWDLGGTLLDNYETSTAAFVETLALYGI--TQDHDSVYQALKVSTPFAIETFAPNLE 61

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
                +KE+              + +   L + + D   +   Q  +   V  R   +  
Sbjct: 62  NFLEKYKENEA-----------RELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE 110

Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
           + E                                      +      ++KP+P   +  
Sbjct: 111 ILE---------------------------KTSIAAYFTEVVTSSSGFKRKPNPESMLYL 143

Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQV 290
            ++  IS    LV+ D  I ++A   AG+   +  +     QV
Sbjct: 144 REKYQISS--GLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQV 184

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

 Score = 66.0 bits (159), Expect = 2e-13
 Identities = 27/228 (11%), Positives = 65/228 (28%), Gaps = 25/228 (10%)

Query: 70  LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
           ++FD DG +++ E ++R+   DA                      +D      G     +
Sbjct: 5   VLFDIDGTLLKVESMNRRVLADALIEVYGT---------EGSTGSHDFSGKMDGAI---I 52

Query: 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMD 189
                  G               + A   D  ++     +++  +   +    GV  L+D
Sbjct: 53  YEVLSNVGLE-----------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLD 101

Query: 190 EAKAAGKKV-AVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
              +    +  + +   ++S    L+       F          D  +            
Sbjct: 102 ALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRM 161

Query: 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVRIIDP 295
                S    +++ D+   ++ A       + +   + T E++    P
Sbjct: 162 TGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKP 209

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.9 bits (151), Expect = 3e-12
 Identities = 29/218 (13%), Positives = 59/218 (27%), Gaps = 21/218 (9%)

Query: 65  QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
            +    + D +G +     +    +    +       P   Q    D    ++L      
Sbjct: 1   DNYSTYLLDIEGTVCPISFVKETLFPYFTNKV-----PQLVQQDTRDSPVSNILSQFHID 55

Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
            K +++ +  E               D     L  L        Y+       V      
Sbjct: 56  NKEQLQAHILELVA-----------KDVKDPILKQLQGYVWAHGYESGQIKAPVYADA-- 102

Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG---DDVKQKKPDP 241
           +  +   K      +    A K       +          L+ ++ G    +   KK + 
Sbjct: 103 IDFIKRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTET 162

Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
             Y    + +G    + L + D+ + L AA   G+A  
Sbjct: 163 QSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATG 200

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 62.2 bits (149), Expect = 4e-12
 Identities = 37/212 (17%), Positives = 67/212 (31%), Gaps = 32/212 (15%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
             +IFDCDGV+++SE +  Q  +   +                  E  +           
Sbjct: 3   DLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISV---------EEMGERFAGMTWKNIL 53

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
                       +S +  +  + D    + + +I   K    +                 
Sbjct: 54  LQVESEASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTT-------------- 99

Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
                       +CS ++   + + L  +     F             + KP P I++  
Sbjct: 100 ---------PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHG 150

Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           A + G+S    +VVEDSV G+  A  AGM  +
Sbjct: 151 AAQFGVSPDRVVVVEDSVHGIHGARAAGMRVI 182

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 62.5 bits (150), Expect = 5e-12
 Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 26/212 (12%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
           +A++FD  G + + + +   A   A+                  P   + +       + 
Sbjct: 3   KAVVFDAYGTLFDVQSVAD-ATERAY------------------PGRGEYITQVWRQKQL 43

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
           +  W     G       D   VT +  A  +  +     E +   +        P     
Sbjct: 44  EYSWLRALMGR----YADFWSVTREALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAA 99

Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
              A+ A  K A+ S      +   + N    + F+ +      D  +  KP P  Y   
Sbjct: 100 QCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISV---DAKRVFKPHPDSYALV 156

Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            + LG++  + L V  +   +  A   G +  
Sbjct: 157 EEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 60.2 bits (144), Expect = 2e-11
 Identities = 20/211 (9%), Positives = 57/211 (27%), Gaps = 35/211 (16%)

Query: 69  ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
           A I+D DG +++S         + F+ F++  D    +   +     D+          +
Sbjct: 3   AFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDL--------LVR 54

Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
           +           + +        + Q  L+   ++      +  I+      +      +
Sbjct: 55  VAEDRNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTI 114

Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
            +                            +         L       +KP P       
Sbjct: 115 LK---------------------------DLGVESYFTEILTSQSGFVRKPSPEAATYLL 147

Query: 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            +  ++  +   + D  + ++ A  +G+  +
Sbjct: 148 DKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI 178

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 60.6 bits (146), Expect = 5e-11
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 26/125 (20%)

Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDV----- 234
           P   V  L+++ K AG ++ + +    +  ++  ENL G+  +   D      DV     
Sbjct: 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL-GLLPYFEADFIATASDVLEAEN 274

Query: 235 ------KQKKPDPSIYVTAAKRLGISE--------------KDCLVVEDSVIGLQAATRA 274
                    KP+P  Y+ A       +               D  +V DS+  L +A + 
Sbjct: 275 MYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKI 334

Query: 275 GMACV 279
           G   +
Sbjct: 335 GATFI 339

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

 Score = 58.7 bits (140), Expect = 6e-11
 Identities = 34/212 (16%), Positives = 64/212 (30%), Gaps = 24/212 (11%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
           + + FD  G + +   +  +  ++AF                W  +  +    +    + 
Sbjct: 3   KGIAFDLYGTLFDVHSVVGRC-DEAFPGRGREISAL------WRQKQLEYTWLRSLMNRY 55

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
                  E     +       +    ++ L D                    P   V   
Sbjct: 56  VNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLRL--------------APFSEVPDS 101

Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
           + E K  G K+A+ S  +  S+   + +    + F   D  L+ D V+  KPD  +Y  A
Sbjct: 102 LRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF---DHLLSVDPVQVYKPDNRVYELA 158

Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
            + LG+     L V  +      A   G    
Sbjct: 159 EQALGLDRSAILFVASNAWDATGARYFGFPTC 190

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.3 bits (139), Expect = 1e-10
 Identities = 26/214 (12%), Positives = 67/214 (31%), Gaps = 14/214 (6%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
           +A+ FD D  +I++    R+   +       +     +  +  D     + +        
Sbjct: 7   RAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYST 66

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
            +      H   +               +   L +  + +          +     V  +
Sbjct: 67  CITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQH---------MILADDVKAM 117

Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
           + E +   + + + +   ++                 +       + K++KP PSI+   
Sbjct: 118 LTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGG----EQKEEKPAPSIFYHC 173

Query: 248 AKRLGISEKDCLVVEDSVI-GLQAATRAGMACVI 280
              LG+   DC++V D++   +Q    AG+   +
Sbjct: 174 CDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATV 207

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 57.2 bits (136), Expect = 2e-10
 Identities = 40/229 (17%), Positives = 63/229 (27%), Gaps = 25/229 (10%)

Query: 68  QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
           + + FD DG ++ S      + N A    N+                             
Sbjct: 5   KLIGFDLDGTLVNSLPDLALSINSALKDVNLPQ---------ASENLVMTWIGNGADVLS 55

Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
           +    +           D                   +   Y            P V   
Sbjct: 56  QRAVDWACKQAEKELTEDEFK------------YFKRQFGFYYGENLCNISRLYPNVKET 103

Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
           ++  KA G  +AV +      V   L        F      L G  + + KP P+ +   
Sbjct: 104 LEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF---SEMLGGQSLPEIKPHPAPFYYL 160

Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVRIIDP 295
             + G+  K  L V DS   + AA  AG A V +TY  +    +    P
Sbjct: 161 CGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKP 209

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 55.3 bits (131), Expect = 9e-10
 Identities = 29/214 (13%), Positives = 62/214 (28%), Gaps = 37/214 (17%)

Query: 66  SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
           + QAL+FD DG +  S+  +     +  + +             + P             
Sbjct: 2   TYQALMFDIDGTLTNSQPAYTTVMREVLATYG----------KPFSPAQAQKTFPMAAEQ 51

Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
                             +++   +  DQ +L   I     +   ++             
Sbjct: 52  AMTELGIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELR------------ 99

Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
                              T          +        +   ++ DD  ++KPDP   +
Sbjct: 100 ---------------LGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLL 144

Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
           TA +++ ++ ++ L + DSV   Q A  A +   
Sbjct: 145 TALEKVNVAPQNALFIGDSVSDEQTAQAANVDFG 178

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.1 bits (124), Expect = 6e-09
 Identities = 19/155 (12%), Positives = 38/155 (24%), Gaps = 18/155 (11%)

Query: 143 IFD-----NPPVTDDDQAKLIDLIQDWK-TERYQQIIKSGTVEPRPGVLRLMDEAKAAGK 196
           +FD      P   D           D    +R  Q I+       P V  ++   ++ G 
Sbjct: 9   VFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQ-----LYPEVPEVLGRLQSLGV 63

Query: 197 KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256
            VA  S                                       + +     + G+   
Sbjct: 64  PVAAASRT-------SEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFS 116

Query: 257 DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR 291
             +  +D    +    R G+ C+      + + + 
Sbjct: 117 QMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLT 151

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 49.1 bits (115), Expect = 1e-07
 Identities = 28/231 (12%), Positives = 60/231 (25%), Gaps = 39/231 (16%)

Query: 66  SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
           S+ A+ FD DG +++S      A+   F    V            D +            
Sbjct: 3   SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPS---------PDAKTIRGFMGPPLES 53

Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
                    +                  +A+L   I D   E                  
Sbjct: 54  SFATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSY------------- 100

Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
                       + + +    S+     +NL     F+G+          +      +  
Sbjct: 101 -----------PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGS-----SPEAPHKADVIH 144

Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQVRIIDP 295
            A +   ++ +  +++ D+   +  A   G+  + IT+       +    P
Sbjct: 145 QALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQP 195

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

 Score = 47.7 bits (112), Expect = 4e-07
 Identities = 26/235 (11%), Positives = 57/235 (24%), Gaps = 51/235 (21%)

Query: 70  LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
           +I D DG I  ++        +    F               P  +  L++ +      +
Sbjct: 7   IICDFDGTITMND-----NIINIMKTFA--------------PPEWMALKDGVLSKTLSI 47

Query: 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMD 189
           +                          +  L+     E     +     + R G    + 
Sbjct: 48  KEGVGR---------------------MFGLLPSSLKEEITSFVLE-DAKIREGFREFVA 85

Query: 190 EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ----------KKP 239
                     V S      V   LE ++  +R          D +               
Sbjct: 86  FINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQ 145

Query: 240 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRIID 294
                 +    L    +  +++ DSV  ++AA  + +     Y  +   +  +  
Sbjct: 146 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNH 200

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 47.2 bits (110), Expect = 6e-07
 Identities = 29/217 (13%), Positives = 64/217 (29%), Gaps = 25/217 (11%)

Query: 67  LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
           ++A+ FD  G ++  E   +                       ++    +   N  G   
Sbjct: 2   IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61

Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQI---IKSGTVEPRPG 183
             +R                  + ++   KL +       E + +I   +     E  P 
Sbjct: 62  RPIR-----------------DIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPE 104

Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
           V+ ++   K       +  + T+  +       I               +    KP P I
Sbjct: 105 VVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSE----EAGFFKPHPRI 160

Query: 244 YVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACV 279
           +  A K+ G+  ++ + V D+ +     +   GM  +
Sbjct: 161 FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 29/221 (13%), Positives = 55/221 (24%), Gaps = 49/221 (22%)

Query: 65  QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
            S  A+ FD D  +I  E +   A               +++++     F   L  ++  
Sbjct: 8   YSADAVCFDVDSTVIREEGIDELA---KICGVEDAVSEMTRRAMGGAVPFKAALTERLAL 64

Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
            +P      +        +                                      PG+
Sbjct: 65  IQPSREQVQRLIAEQPPHL-------------------------------------TPGI 87

Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENL-------IGMERFEGLDCFLAGDDVKQK 237
             L+   +    +V + S   +S V      L                +   AG D  Q 
Sbjct: 88  RELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQP 147

Query: 238 KPDPSIYVTAAKRL--GISEKDCLVVEDSVIGLQAATRAGM 276
             +        K L      K  +++ D    ++A   A  
Sbjct: 148 TAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADA 188

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	298
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	100.0
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.97
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.97
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.97
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.97
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.97
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.96
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.96
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.96
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.95
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.95
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.95
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.93
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.93
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.93
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.92
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.92
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.91
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.9
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.85
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.84
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.82
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.8
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.8
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.79
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.75
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.75
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.74
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.73
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.71
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.68
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.65
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.62
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.43
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.34
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	99.29
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.29
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	99.26
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	99.17
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	99.15
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	99.12
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	99.1
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	99.09
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.06
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	99.05
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	99.03
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	98.88
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	98.74
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	98.7
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.7
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	98.62
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	98.35
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	98.31
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	98.07
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	97.99
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.66
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.45
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	96.52
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	96.11
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	92.57
d1xm3a_	251	Thiazole biosynthesis protein ThiG {Bacillus subti	91.01
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	89.82
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	87.87
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	87.46
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	87.41
d2pjua1	186	Propionate catabolism operon regulatory protein Pr	86.19
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	84.65
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	84.05

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.6e-32  Score=221.39  Aligned_cols=195  Identities=23%  Similarity=0.369  Sum_probs=148.0

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHH-HHcCCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~g~~~~~~~  144 (298)
                      .|++|+||+||||+|+...+.++|.++++++|++.....            ++....+.......... ....+.     
T Consensus         2 ~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~-----   64 (218)
T d1te2a_           2 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN------------ELPDTLGLRIDMVVDLWYARQPWN-----   64 (218)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGG------------GSCCCTTCCHHHHHHHHHHHSCCS-----
T ss_pred             cceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHH------------HHHHHhCCCccchhhhhhhccccc-----
Confidence            589999999999999999899999999999987653311            11222233322222222 222211     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                            .....++.+.+.+...+.+..     ...++||+.++|+.|+++|++++|+||+....+...++.+ ++..+  
T Consensus        65 ------~~~~~~~~~~~~~~~~~~~~~-----~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~-~l~~~--  130 (218)
T d1te2a_          65 ------GPSRQEVVERVIARAISLVEE-----TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF-DLRDS--  130 (218)
T ss_dssp             ------SSCHHHHHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred             ------chhHHHHHHHHHHHHHHhhhc-----cccccchHHHHHHHhhhccccccccccccccccccccccc-ccccc--
Confidence                  112222233333333232222     2468999999999999999999999999999999999998 99988  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR  291 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~  291 (298)
                      |+.++++++++.+||+|++|+.+++++|++|++|+||||+.+|+.+|+++|+.+|++.++....+..
T Consensus       131 F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~  197 (218)
T d1te2a_         131 FDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPR  197 (218)
T ss_dssp             CSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGG
T ss_pred             ccccccccccccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchh
Confidence            9999999999999999999999999999999999999999999999999999999887765554433

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.97  E-value=1.1e-31  Score=216.11  Aligned_cols=190  Identities=17%  Similarity=0.276  Sum_probs=148.6

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      |++|+|+||+||||+|+.+.+.++|..+++++|.+...             +++...++...   ...+.+.+..     
T Consensus         1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~~~~~---~~~~~~~~~~-----   59 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSP-------------AQAQKTFPMAA---EQAMTELGIA-----   59 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCH-------------HHHHHHTTSCH---HHHHHHTTCC-----
T ss_pred             CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhcchh---hhhhhccccc-----
Confidence            46899999999999999999999999999999876533             23333444433   3344444432     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                            ....    +.+.+.+.+.+.+..  ..+.++||+.++|+.|++ +++++|+||+....+...++++ ++..+  
T Consensus        60 ------~~~~----~~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~-~l~~~--  123 (207)
T d2hdoa1          60 ------ASEF----DHFQAQYEDVMASHY--DQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSY-PFMMR--  123 (207)
T ss_dssp             ------GGGH----HHHHHHHHHHHTTCG--GGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTS-GGGGG--
T ss_pred             ------hhhH----HHHHHHhhhhhcccc--cccccccchhhhhhhhcc-cccccccccccccccccccccc-ccccc--
Confidence                  1122    233333334444332  245799999999999975 6999999999999999999998 99988  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc-CCCchhHhh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY-TSSTAEQVR  291 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~-~~~~~~~~~  291 (298)
                      |+.++++++.+.+||+|++|+.+++++|++|++|+||||+.+|+++|+++|+.+|++. |.....+..
T Consensus       124 f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~  191 (207)
T d2hdoa1         124 MAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQ  191 (207)
T ss_dssp             EEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGS
T ss_pred             ccccccccccccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhh
Confidence            9999999999999999999999999999999999999999999999999999999664 444444443

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.97  E-value=3.3e-30  Score=209.39  Aligned_cols=206  Identities=19%  Similarity=0.221  Sum_probs=151.3

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      .++|+|+||+||||+|+...+.+++.++++++|.....            .+.+....+................   ..
T Consensus         2 ~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~---~~   66 (224)
T d2hsza1           2 TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQAS------------ENLVMTWIGNGADVLSQRAVDWACK---QA   66 (224)
T ss_dssp             SSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCC------------HHHHHHHCSSCHHHHHHHHHHHHHH---HH
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCc------------HHHHHHHhhhhhhhhhhhhhhhhhh---hh
Confidence            47999999999999999999999999999999976544            2234444454443322111110000   00


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                      . ....    .+............+... ......++||+.++|..|+++|++++++||+....++..++.+ |+..+  
T Consensus        67 ~-~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~-gl~~~--  137 (224)
T d2hsza1          67 E-KELT----EDEFKYFKRQFGFYYGEN-LCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF-GIDHL--  137 (224)
T ss_dssp             T-CCCC----HHHHHHHHHHHHHHHHHH-TTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG--
T ss_pred             h-hhhh----HHHHHHHHHHHHHHHHHh-hccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhc-Cchhh--
Confidence            0 0000    111122222222222222 2345689999999999999999999999999999999999998 99998  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC-CCchhHhhhcC
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT-SSTAEQVRIID  294 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~-~~~~~~~~~~~  294 (298)
                      |+.++++++.+..||+|++|..+++++|+++++|+||||+.+|+++|+++|+.+|++.. ......+.+..
T Consensus       138 f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~  208 (224)
T d2hsza1         138 FSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSK  208 (224)
T ss_dssp             CSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGC
T ss_pred             ccccccccccccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcC
Confidence            99999999999999999999999999999999999999999999999999999997754 33344454443

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.97  E-value=3.3e-30  Score=206.81  Aligned_cols=181  Identities=15%  Similarity=0.286  Sum_probs=138.9

Q ss_pred             cEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhH-HHHHHHcCCCCCcccCC
Q 022348           68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDN  146 (298)
Q Consensus        68 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~  146 (298)
                      ++++||+||||+|+...+..+|.++++++|++...         ..   ......+.+.... .......+..       
T Consensus         2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~~~~~-------   62 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDK---------EK---VREFIFKYSVQDLLVRVAEDRNLD-------   62 (204)
T ss_dssp             CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCH---------HH---HHHHHHHSCHHHHHHHHHHHHTCC-------
T ss_pred             EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH---------HH---HHHhhcccccccccccccchhhhh-------
Confidence            68999999999999998999999999999876432         11   1222334443333 2233332221       


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcc
Q 022348          147 PPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD  226 (298)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd  226 (298)
                                 .+.+.++....+.+.  .....++||+.++|+.|+++|++++|+||+... ...+++++ |+..+  |+
T Consensus        63 -----------~~~~~~~~~~~~~~~--~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~-gl~~~--f~  125 (204)
T d2go7a1          63 -----------VEVLNQVRAQSLAEK--NAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDL-GVESY--FT  125 (204)
T ss_dssp             -----------HHHHHHHHHHHHTTC--GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHH-TCGGG--EE
T ss_pred             -----------HHHHHHHHHHHHHhh--cccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhc-ccccc--cc
Confidence                       122233333333322  234578999999999999999999999998764 56789998 99999  99


Q ss_pred             eEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       227 ~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      .++++++.+..||+|++|+.+++++|++|++|+||||+.+|+++|+++|+.+|++..+
T Consensus       126 ~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~  183 (204)
T d2go7a1         126 EILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES  183 (204)
T ss_dssp             EEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred             cccccccccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence            9999999999999999999999999999999999999999999999999999966543

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.97  E-value=3.3e-30  Score=204.06  Aligned_cols=185  Identities=16%  Similarity=0.226  Sum_probs=141.5

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      |++|+|+||+||||+|+...+..+|.++++++|+....             +.+....+.......   ......     
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~~~~~~~~---~~~~~~-----   59 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDH-------------DSVYQALKVSTPFAI---ETFAPN-----   59 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHHHHCHHHHH---HHHCTT-----
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccH-------------HHHHhhhhccchhhh---hhhhHH-----
Confidence            57999999999999999999999999999999876432             123333333332222   222110     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                               .    +.+.+.+.+.+...+  ....++||+.++|+.|+++|++++|+||+.... .+.++.+ ++..+  
T Consensus        60 ---------~----~~~~~~~~~~~~~~~--~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~-~l~~~--  120 (187)
T d2fi1a1          60 ---------L----ENFLEKYKENEAREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKT-SIAAY--  120 (187)
T ss_dssp             ---------C----TTHHHHHHHHHHHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHT-TCGGG--
T ss_pred             ---------H----HHHHHHHHHHHHHHh--hcCcccchhHHHHHHHHhhhccccccccCccch-hhhhhhh-ccccc--
Confidence                     0    111222233333332  345789999999999999999999999987764 4578887 99988  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhh
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVR  291 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~  291 (298)
                      ||.++++++++..||+|++|+.+++++|++  +|+||||+..|+++|+++|+.++++.+..+..++-
T Consensus       121 fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~--~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~  185 (187)
T d2fi1a1         121 FTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVL  185 (187)
T ss_dssp             EEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHH
T ss_pred             cccccccccccccCCCHHHHHHHHHHcCCC--CeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhc
Confidence            999999999999999999999999999974  59999999999999999999999988877666643

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.97  E-value=1.1e-29  Score=206.09  Aligned_cols=189  Identities=21%  Similarity=0.384  Sum_probs=144.3

Q ss_pred             CccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHc-CCCCCccc
Q 022348           66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEH-GWPSSTIF  144 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-g~~~~~~~  144 (298)
                      |||+|+||+||||+|+...+.+++.+++.++|++....            +......+.+.......+.+. +.      
T Consensus         1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~------   62 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDR------------QFNEQLKGVSREDSLQKILDLADK------   62 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCH------------HHHTTTTTCCHHHHHHHHHTTSSS------
T ss_pred             CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChH------------HHHHHHhhccchhhhhhccccccc------
Confidence            58999999999999999999999999999999875441            112223344444333333221 11      


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhc-CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                         ....+.    ...+.+.+.+.|...+.. ....++||+.++|+.|++.|++++++||+..  ....++.+ ++..+ 
T Consensus        63 ---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~-~l~~~-  131 (221)
T d1o08a_          63 ---KVSAEE----FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERM-NLTGY-  131 (221)
T ss_dssp             ---CCCHHH----HHHHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHT-TCGGG-
T ss_pred             ---cchhhh----hhhHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecch--hhHHHHhh-ccccc-
Confidence               111222    233334444445544432 2357899999999999999999999999754  56778887 99988 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                       |+.++++++.+.+||+|++|+.+++++|++|++|+||||+.+|+++|+++|+.+|++..+
T Consensus       132 -f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~  191 (221)
T d1o08a_         132 -FDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             -CSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred             -cccccccccccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECCh
Confidence             999999999999999999999999999999999999999999999999999999988754

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.96  E-value=1e-28  Score=205.01  Aligned_cols=197  Identities=19%  Similarity=0.257  Sum_probs=139.5

Q ss_pred             CccEEEEecCCccccchhH-HHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHc-CC--CCC
Q 022348           66 SLQALIFDCDGVIIESEHL-HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEH-GW--PSS  141 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-g~--~~~  141 (298)
                      ++|+|+||+||||+|+... +..++.++++++|++...+             ++...+|.........+.+. .+  ...
T Consensus         1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~   67 (257)
T d1swva_           1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAE-------------EARKPMGLLKIDHVRALTEMPRIASEWN   67 (257)
T ss_dssp             CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHH-------------HHHTTTTSCHHHHHHHHHHSHHHHHHHH
T ss_pred             CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHH-------------HHHHHhCCcHHHHHHHHhhhhhhhHHHH
Confidence            4899999999999998653 4678899999998765432             22222222211111000000 00  000


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                      .++.. .....+    ...+...+.+.+...+. ....++||+.++|+.|+++|++++|+||+....+...++.+ ++..
T Consensus        68 ~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~-~l~~  140 (257)
T d1swva_          68 RVFRQ-LPTEAD----IQEMYEEFEEILFAILP-RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEA-ALQG  140 (257)
T ss_dssp             HHHSS-CCCHHH----HHHHHHHHHHHHHHHGG-GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHH-HHTT
T ss_pred             HHhcc-cCCHHH----HHHHHHHHHHHHHHHhh-ccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHH-hhcc
Confidence            00110 011111    23344444555555443 34579999999999999999999999999999999999998 8888


Q ss_pred             ccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          222 FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       222 ~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~-~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      ++ +|.++++++++.+||+|++|..+++++|+.| ++|+||||+.+|+.+|+++||.+|++..
T Consensus       141 ~f-~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~  202 (257)
T d1swva_         141 YK-PDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVIL  202 (257)
T ss_dssp             CC-CSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECT
T ss_pred             cc-cccccccccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEcc
Confidence            62 3889999999999999999999999999965 8999999999999999999999996543

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.96  E-value=1.1e-28  Score=198.62  Aligned_cols=193  Identities=14%  Similarity=0.236  Sum_probs=147.4

Q ss_pred             CCccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCccc
Q 022348           65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  144 (298)
                      .++|+|+||+||||+|+...+..+|.++++++|++...            .+.+....+.+....   +...        
T Consensus         2 ~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~---~~~~--------   58 (210)
T d2ah5a1           2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPD------------AKTIRGFMGPPLESS---FATC--------   58 (210)
T ss_dssp             TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCC------------HHHHHHTSSSCHHHH---HHTT--------
T ss_pred             CCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHhhhcchhhh---cccc--------
Confidence            46999999999999999999999999999999976544            234555555544332   2111        


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~  224 (298)
                          .......+..    +.+...+.... .....++||+.++|..|+.++ +++|+||+....++..++.+ |+..+  
T Consensus        59 ----~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~-gl~~~--  125 (210)
T d2ah5a1          59 ----LSKDQISEAV----QIYRSYYKAKG-IYEAQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNL-EIHHF--  125 (210)
T ss_dssp             ----SCGGGHHHHH----HHHHHHHHHTG-GGSCEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHT-TCGGG--
T ss_pred             ----ccchhhHHHH----HHHHHHHHhhh-hhcccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhh-ccccc--
Confidence                1112222222    22223233222 234578999999999999874 89999999999999999998 99998  


Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEc-CCCchhHhhhcCC
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY-TSSTAEQVRIIDP  295 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~-~~~~~~~~~~~~~  295 (298)
                      ||.++++++.  +||+|++|..+++++|++|++|+||||+.+|+.+|+++|+++|++. |....+++...++
T Consensus       126 fd~v~~~~~~--~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~p  195 (210)
T d2ah5a1         126 FDGIYGSSPE--APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQP  195 (210)
T ss_dssp             CSEEEEECSS--CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCC
T ss_pred             cccccccccc--ccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCC
Confidence            9999988875  5788899999999999999999999999999999999999999775 5556667766543

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.96  E-value=3.2e-28  Score=198.46  Aligned_cols=201  Identities=16%  Similarity=0.223  Sum_probs=149.0

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhc-CCCCCCCccccCCCChHHHHHHHHHhcCCh-hhHHHHHHHcCCCCCccc
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHF-NVRCDPSSQQSLNWDPEFYDVLQNQIGGGK-PKMRWYFKEHGWPSSTIF  144 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~g~~~~~~~  144 (298)
                      .|+|+||+||||+|+...+..++.+++.++ +.........              ..+... .....++...++.     
T Consensus         2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~-----   62 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHD--------------FSGKMDGAIIYEVLSNVGLE-----   62 (228)
T ss_dssp             CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---C--------------CTTCCHHHHHHHHHHTTTCC-----
T ss_pred             ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHHHH--------------HhcCchHHHHHHHHHHhCCC-----
Confidence            478999999999999999999998887774 4433221111              111111 1123334443322     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCC-CeEEEEeCCChhhHHHHHHHHhCCcccc
Q 022348          145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIGMERFE  223 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g-~~i~i~S~~~~~~~~~~l~~~~~l~~~~  223 (298)
                            .....+.+....+.+...+.+........++||+.++|+.|+++| ++++|+||+....+...++.+ |+..+ 
T Consensus        63 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~-gl~~~-  134 (228)
T d2hcfa1          63 ------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP-GIDHY-  134 (228)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT-TCSTT-
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhh-ccccc-
Confidence                  111222233444444555555544455689999999999999987 899999999999999999988 99998 


Q ss_pred             CcceEEeCCCCCCCCCCHHHHHHHHHHh---CCCCCcEEEEecChhhHHHHHHcCCeEEEE-cCCCchhHhhhcCC
Q 022348          224 GLDCFLAGDDVKQKKPDPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAGMACVIT-YTSSTAEQVRIIDP  295 (298)
Q Consensus       224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l---gi~~~~~~~vgD~~~Di~~a~~aG~~~v~~-~~~~~~~~~~~~~~  295 (298)
                       ||.++++++....||+|.++...++++   |++|++|+||||+.+|+.+|+++||.+|++ +|....+++...++
T Consensus       135 -fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~a  209 (228)
T d2hcfa1         135 -FPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKP  209 (228)
T ss_dssp             -CSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCC
T ss_pred             -ccccccccccccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCC
Confidence             999999999999999999887777666   899999999999999999999999999954 67878888776554

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.7e-27  Score=196.29  Aligned_cols=105  Identities=20%  Similarity=0.393  Sum_probs=95.8

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      ...++||+.++|+.|++ |++++|+||++...+...++.+ |+..+  ||.++++++++.+||+|++|+.+++++|++|+
T Consensus       107 ~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~-gl~~~--fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~  182 (247)
T d2gfha1         107 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEAC-ACQSY--FDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPG  182 (247)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHH-TCGGG--CSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGG
T ss_pred             cCccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhc-ccccc--ccccccccccccchhhhhhHHHHHHHhhcCHH
Confidence            45799999999999985 7999999999999999999998 99988  99999999999999999999999999999999


Q ss_pred             cEEEEecCh-hhHHHHHHcCCeEE-EEcCCC
Q 022348          257 DCLVVEDSV-IGLQAATRAGMACV-ITYTSS  285 (298)
Q Consensus       257 ~~~~vgD~~-~Di~~a~~aG~~~v-~~~~~~  285 (298)
                      +|+||||+. +|+.+|+++|+.++ ++++..
T Consensus       183 ~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~  213 (247)
T d2gfha1         183 DCVMVGDTLETDIQGGLNAGLKATVWINKSG  213 (247)
T ss_dssp             GEEEEESCTTTHHHHHHHTTCSEEEEECTTC
T ss_pred             hcceeccChHhHHHHHHHcCCeEEEEECCCC
Confidence            999999997 79999999999865 554433

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.95  E-value=8.5e-27  Score=189.04  Aligned_cols=183  Identities=24%  Similarity=0.379  Sum_probs=136.4

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHH-HHHHcCCCCCcccC
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTIFD  145 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~  145 (298)
                      +|+||||+||||+|+...+..+|.++++++|++.+.            .+......|.....+.. ...+.+...     
T Consensus         2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~-----   64 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISV------------EEMGERFAGMTWKNILLQVESEASIPL-----   64 (222)
T ss_dssp             CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCH------------HHHHHHHTTCCHHHHHHHHHHHHCCCC-----
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCH------------HHHHHHHhhhccccccccccccccccc-----
Confidence            799999999999999999999999999999876432            11223344555555433 344444321     


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCc
Q 022348          146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL  225 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~f  225 (298)
                              ..+..+.+...+......     ...++||+.++|++|+.   +.+++||.....+...++.+ ++..+  |
T Consensus        65 --------~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~-~l~~~--f  125 (222)
T d2fdra1          65 --------SASLLDKSEKLLDMRLER-----DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKV-GLKPY--F  125 (222)
T ss_dssp             --------CTHHHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHT-TCGGG--T
T ss_pred             --------cccchhHHHHHHHHHhhh-----ccchhhhHHHHhhhccc---cceeeeecchhhhhhhhccc-ccccc--c
Confidence                    111223333333222222     24799999999998875   46799999999999999998 99998  7


Q ss_pred             ceEEe-CCC--CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          226 DCFLA-GDD--VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       226 d~v~~-~~~--~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      +.++. +++  ...+||+|++|..+++++|++|++|+||||+..|+.+|+++||.+|++.++.
T Consensus       126 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~  188 (222)
T d2fdra1         126 APHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGAS  188 (222)
T ss_dssp             TTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCST
T ss_pred             ceeecccccccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCC
Confidence            76544 432  5678999999999999999999999999999999999999999999776543

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.95  E-value=7.6e-27  Score=190.51  Aligned_cols=108  Identities=19%  Similarity=0.346  Sum_probs=98.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      ..++||+.++|+.|+ +|++++++||+....+...++.+ |+..+  ||.++++++.+..||+|++|..+++++|++|++
T Consensus        99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~-gl~~~--fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~  174 (230)
T d1x42a1          99 GELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDAL-GIKDL--FDSITTSEEAGFFKPHPRIFELALKKAGVKGEE  174 (230)
T ss_dssp             CCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHH-TCGGG--CSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGG
T ss_pred             CcccccHHHHHHHhh-ccCceeeeeccccccchhhhccc-ccccc--cccccccccccccchhhHHHHHHHhhhcccccc
Confidence            468999999999997 47999999999999999999998 99988  999999999999999999999999999999999


Q ss_pred             EEEEecCh-hhHHHHHHcCCeEEEEcCCCchhH
Q 022348          258 CLVVEDSV-IGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       258 ~~~vgD~~-~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      |+||||+. +|+++|+++|+.+|+++......+
T Consensus       175 ~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~  207 (230)
T d1x42a1         175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKRE  207 (230)
T ss_dssp             EEEEESCTTTTHHHHHTTTCEEEEECTTSCCGG
T ss_pred             cceeecCcHhHHHHHHHcCCEEEEECCCCCCcc
Confidence            99999986 799999999999998875544443

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.93  E-value=2.2e-25  Score=180.16  Aligned_cols=105  Identities=24%  Similarity=0.312  Sum_probs=99.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      ...++|++.++++.+++.|++++++||+.....+..++.. ++..+  ||.++++++.+..||+|++|+.+++++|+.|+
T Consensus        91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~-~~~~~--fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~  167 (220)
T d1zrna_          91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA-GLRDG--FDHLLSVDPVQVYKPDNRVYELAEQALGLDRS  167 (220)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEESGGGTCCTTSHHHHHHHHHHHTSCGG
T ss_pred             cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhc-ccccc--ccceeeeeeeeccccHHHHHHHHHHHhCCCCc
Confidence            4579999999999999999999999999999899888887 99988  99999999999999999999999999999999


Q ss_pred             cEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          257 DCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +|+||||+..|+.+|+++||++++++.+
T Consensus       168 e~l~VgD~~~Di~~A~~aG~~~v~v~r~  195 (220)
T d1zrna_         168 AILFVASNAWDATGARYFGFPTCWINRT  195 (220)
T ss_dssp             GEEEEESCHHHHHHHHHHTCCEEEECTT
T ss_pred             eEEEEecChHhHHHHHHcCCEEEEEcCC
Confidence            9999999999999999999999988643

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.5e-24  Score=176.87  Aligned_cols=105  Identities=19%  Similarity=0.154  Sum_probs=92.7

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceE-EeCCCCCCCCCCHHHHHHHHHHhCCC
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF-LAGDDVKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v-~~~~~~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      ....++||+.++|.+|+++|++++|+||+........++.. ++..+  |+.. ...++.+..||+|.+|..+++++|++
T Consensus       124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~-~~~~~--~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~  200 (253)
T d1zs9a1         124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS-TEGDI--LELVDGHFDTKIGHKVESESYRKIADSIGCS  200 (253)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB-TTBCC--GGGCSEEECGGGCCTTCHHHHHHHHHHHTSC
T ss_pred             cccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHc-Ccchh--hhhcceeeccccccCCCcHHHHHHHHHhCCC
Confidence            34578999999999999999999999999999888888887 88877  5533 33356678999999999999999999


Q ss_pred             CCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          255 EKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       255 ~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      |++|+||||+.+|+.+|+++||++|++..
T Consensus       201 p~~~l~vgD~~~dv~aA~~aG~~ti~v~r  229 (253)
T d1zs9a1         201 TNNILFLTDVTREASAAEEADVHVAVVVR  229 (253)
T ss_dssp             GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             cCcEEEEeCCHHHHHHHHHcCCEEEEEeC
Confidence            99999999999999999999999998853

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.93  E-value=4.8e-26  Score=187.12  Aligned_cols=105  Identities=20%  Similarity=0.292  Sum_probs=97.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      ...++|++.++|..|+  ++.++++||+....+...++.+ ++..+  ||.++++++++..||+|++|..+++++|++|+
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~-~~~~~--fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~  165 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANA-GLTDS--FDAVISVDAKRVFKPHPDSYALVEEVLGVTPA  165 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGG
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhc-ccccc--cccccccccccccCccHHHHHHHHHHhCCChh
Confidence            4578999999999886  6789999999999899999887 99988  99999999999999999999999999999999


Q ss_pred             cEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          257 DCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      +|+||||+.+|+.+|+++||.+|+++.+..
T Consensus       166 e~l~VgD~~~di~~A~~aG~~tv~v~r~~~  195 (245)
T d1qq5a_         166 EVLFVSSNGFDVGGAKNFGFSVARVARLSQ  195 (245)
T ss_dssp             GEEEEESCHHHHHHHHHHTCEEEEECCSCH
T ss_pred             hEEEEeCCHHHHHHHHHcCCeEEEEcCCCc
Confidence            999999999999999999999999975543

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.7e-25  Score=180.81  Aligned_cols=112  Identities=17%  Similarity=0.197  Sum_probs=94.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhH----HHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV----ILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGI  253 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~----~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi  253 (298)
                      ..++||+.++|..|+++|++++++||+.....    ....... ++..+  ||.++++++++.+||+|++|+.+++++|+
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~-~~~~~--fd~i~~s~~~~~~KP~~~~~~~~~~~~~~  174 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC-ELKMH--FDFLIESCQVGMVKPEPQIYKFLLDTLKA  174 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH-HHHTT--SSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhc-ChHhh--ccEEEeccccccchhHHHHHHHHhhhccc
Confidence            47999999999999999999999999764432    2233333 67777  99999999999999999999999999999


Q ss_pred             CCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc-hhHhhh
Q 022348          254 SEKDCLVVEDSVIGLQAATRAGMACVITYTSST-AEQVRI  292 (298)
Q Consensus       254 ~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~-~~~~~~  292 (298)
                      +|++|+||||+..|+++|+++||++|++.++.. .+++++
T Consensus       175 ~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~~~~l~~  214 (225)
T d1zd3a1         175 SPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEK  214 (225)
T ss_dssp             CGGGEEEEESCHHHHHHHHHTTCEEEECSSHHHHHHHHHH
T ss_pred             CccceeEEecCHHHHHHHHHcCCEEEEECCcchhHHHHHH
Confidence            999999999999999999999999998876544 344443

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=6.9e-26  Score=183.40  Aligned_cols=113  Identities=15%  Similarity=0.194  Sum_probs=97.7

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCCh----hhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATK----SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG  252 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~----~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lg  252 (298)
                      ...++||+.++|..|+++|++++++||+..    ......+... ++..+  ||.++++++++.+||+|++|..+++++|
T Consensus        95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~-~l~~~--fd~i~~s~~~~~~KP~p~~~~~~~~~~~  171 (222)
T d1cr6a1          95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMC-ELSQH--FDFLIESCQVGMIKPEPQIYNFLLDTLK  171 (222)
T ss_dssp             TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHH-HHGGG--CSEEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred             cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhc-ChHhh--hceeeehhhccCCCCChHHHHHHHHHhC
Confidence            357999999999999999999999998543    2344445565 88888  9999999999999999999999999999


Q ss_pred             CCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc-hhHhhh
Q 022348          253 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSST-AEQVRI  292 (298)
Q Consensus       253 i~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~-~~~~~~  292 (298)
                      ++|++|+||||+..|+++|+++||.+|++..+.. .+++.+
T Consensus       172 v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~~  212 (222)
T d1cr6a1         172 AKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEK  212 (222)
T ss_dssp             SCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHHH
T ss_pred             CCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHHH
Confidence            9999999999999999999999999998876655 445554

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=5.7e-24  Score=167.93  Aligned_cols=111  Identities=21%  Similarity=0.366  Sum_probs=99.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK  256 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~  256 (298)
                      ...+++|+.+++..++.+|++++++||+........+..+.++..+  ||.++++++.+..||+|++|+.+++++|++|+
T Consensus        82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~  159 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYLSQDLGMRKPEARIYQHVLQAEGFSPS  159 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH--CSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             ccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhh--ccceeecccccccccchHHHHHHHHhcCCCCC
Confidence            3578999999999999999999999999877666666654477777  99999999999999999999999999999999


Q ss_pred             cEEEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          257 DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       257 ~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      +|+||||+.+|+++|+++|+++|+++.+.+..+
T Consensus       160 ~~l~vgDs~~di~~A~~aG~~ti~v~~~~~~~~  192 (197)
T d2b0ca1         160 DTVFFDDNADNIEGANQLGITSILVKDKTTIPD  192 (197)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECCSTTHHHH
T ss_pred             eEEEEeCCHHHHHHHHHcCCEEEEECCCCCCHH
Confidence            999999999999999999999999988776544

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=2.4e-23  Score=160.64  Aligned_cols=108  Identities=12%  Similarity=0.183  Sum_probs=93.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChh-hHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCC
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKS-SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE  255 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~-~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~  255 (298)
                      .+.++||+.++|+.|+++|++++|+||+... .....++.+ ++..+  |+.+...     .||+|+.|..+++++|++|
T Consensus        44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~-~~~~~--~~~~~~~-----~kp~~~~~~~~~~~~~~~~  115 (164)
T d1u7pa_          44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELF-DLGKY--FIQREIY-----PGSKVTHFERLHHKTGVPF  115 (164)
T ss_dssp             EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHT-TCGGG--CSEEEES-----SSCHHHHHHHHHHHHCCCG
T ss_pred             ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcc-ccccc--ceeeecc-----cCCChHHHHHHHHHhCCCh
Confidence            3579999999999999999999999988764 445566666 88877  6766543     5899999999999999999


Q ss_pred             CcEEEEecChhhHHHHHHcCCeEEEEcCCCchhHhhh
Q 022348          256 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQVRI  292 (298)
Q Consensus       256 ~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~  292 (298)
                      ++|+||||+..|+++|+++|+.+|++..+.+.+++++
T Consensus       116 ~~~l~igD~~~di~aA~~aG~~~i~v~~G~~~~~~~~  152 (164)
T d1u7pa_         116 SQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQ  152 (164)
T ss_dssp             GGEEEEESCHHHHHHHHTTTCEEEECSSCCCHHHHHH
T ss_pred             HHEEEEcCCHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence            9999999999999999999999998887777776654

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=2.8e-21  Score=155.99  Aligned_cols=100  Identities=17%  Similarity=0.329  Sum_probs=78.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHH-----------HHHHhCCccccCcceEEeCCCCCCCCCCHHHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC-----------LENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT  246 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~-----------l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~  246 (298)
                      ..+++++.+++.    .+..+++.++.........           ++.+ ++..+  ||.+++++. ..+||+|++|..
T Consensus        96 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~--Fd~v~~~~~-~~~KP~p~~f~~  167 (225)
T d2g80a1          96 APVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSL-DLNSY--IDGYFDINT-SGKKTETQSYAN  167 (225)
T ss_dssp             BCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCB-CCGGG--CCEEECHHH-HCCTTCHHHHHH
T ss_pred             ccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhc-CCccc--cceeeeccc-cCCCCChhHhHH
Confidence            346666666654    4466788888766543322           2333 67777  899888755 447999999999


Q ss_pred             HHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       247 ~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      +++++|+.|++|+||||+.+|+.+|+++||.+|++..+.
T Consensus       168 ~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g  206 (225)
T d2g80a1         168 ILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPG  206 (225)
T ss_dssp             HHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTT
T ss_pred             HHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCC
Confidence            999999999999999999999999999999999887443

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.1e-21  Score=149.91  Aligned_cols=107  Identities=16%  Similarity=0.219  Sum_probs=77.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCCh---------------hhHHHHHHHHhCCcccc-CcceEEeCCCCCCCCCCH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFE-GLDCFLAGDDVKQKKPDP  241 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~---------------~~~~~~l~~~~~l~~~~-~fd~v~~~~~~~~~KP~~  241 (298)
                      +.++||+.++|+.|+++|++++++||...               ......+... ++.... -|+..+..++....||+|
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~i~~~~~~~~~~~~~~KP~p  107 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQ-GVQFDEVLICPHLPADECDCRKPKV  107 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHT-TCCEEEEEEECCCGGGCCSSSTTSS
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhcccc-ccccceeeecccccccccccccccc
Confidence            46899999999999999999999999641               1123334443 443100 012222334566789999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCC
Q 022348          242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS  285 (298)
Q Consensus       242 ~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~  285 (298)
                      .++..+++++|++|++|+||||+..|+++|+++||.++++....
T Consensus       108 ~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~  151 (161)
T d2fpwa1         108 KLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  151 (161)
T ss_dssp             GGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             HHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence            99999999999999999999999999999999999999876543

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.82  E-value=5.6e-20  Score=146.37  Aligned_cols=102  Identities=31%  Similarity=0.435  Sum_probs=77.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCCh---------------hhHHHHHHHHhCCccccCcceEEeCC----------
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLAGD----------  232 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~---------------~~~~~~l~~~~~l~~~~~fd~v~~~~----------  232 (298)
                      +.++||+.++|+.|+++|++++|+||...               ..+...+... |+.    ++.++.+.          
T Consensus        47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~-g~~----~~~~~~~~~~~~~~~~~~  121 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE-GVF----VDMVLACAYHEAGVGPLA  121 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT-TCC----CSEEEEECCCTTCCSTTC
T ss_pred             eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhc-ccc----cceEEEeccccccccccc
Confidence            46899999999999999999999999431               1122223332 221    34333332          


Q ss_pred             --CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          233 --DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       233 --~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                        +..+.||+|.++..+++++|+++++|+||||+.+|+++|++|||.++++..+
T Consensus       122 ~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g  175 (209)
T d2o2xa1         122 IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDG  175 (209)
T ss_dssp             CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETC
T ss_pred             ccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCC
Confidence              2234699999999999999999999999999999999999999999865443

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.80  E-value=6.5e-20  Score=148.35  Aligned_cols=100  Identities=15%  Similarity=0.104  Sum_probs=82.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcce---EEeCC----------CCCCCCCCHHHH
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC---FLAGD----------DVKQKKPDPSIY  244 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~---v~~~~----------~~~~~KP~~~~~  244 (298)
                      +.++||+.++++.|+++|++++++||+....++.+++++ ++..+  |.+   .+..+          .....++++...
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l-~~~~~--~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  150 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI-VEKDR--IYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  150 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT-SCGGG--EEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHc-CCccc--eeeeeEEEeCCcceeccccccccccccCCHHHH
Confidence            479999999999999999999999999999999999887 66544  321   11111          123457788899


Q ss_pred             HHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       245 ~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ..+++++++++++|+||||+.+|++||++||+..++
T Consensus       151 ~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~  186 (226)
T d2feaa1         151 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR  186 (226)
T ss_dssp             HHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC
T ss_pred             HHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEe
Confidence            999999999999999999999999999999986543

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.2e-19  Score=146.09  Aligned_cols=106  Identities=15%  Similarity=0.112  Sum_probs=75.9

Q ss_pred             CCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcc--------eEEeCCCCCC----CCCCHHH
Q 022348          176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD--------CFLAGDDVKQ----KKPDPSI  243 (298)
Q Consensus       176 ~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd--------~v~~~~~~~~----~KP~~~~  243 (298)
                      ....++||+.++++.|+++|++++|+|++....++.+++.+ |++.+..+.        ..+++.....    .+.+...
T Consensus        79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~l-gi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~  157 (217)
T d1nnla_          79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKL-NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKV  157 (217)
T ss_dssp             SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHH
T ss_pred             hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHh-CCcccceeeeeeeeeehhccccceeeeeeeccchHHHH
Confidence            45679999999999999999999999999999999999998 887431111        1111111111    1112344


Q ss_pred             HHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       244 ~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      .+.+.++  +.+++|++|||+.+|+.|++.+|+.+++..++
T Consensus       158 v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~  196 (217)
T d1nnla_         158 IKLLKEK--FHFKKIIMIGDGATDMEACPPADAFIGFGGNV  196 (217)
T ss_dssp             HHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEEEEECSSC
T ss_pred             HHHHHhc--cCccccEEEEeCHhhHHHHHhCCceEEECCCH
Confidence            5555444  45689999999999999999999986554433

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=7.3e-19  Score=137.38  Aligned_cols=106  Identities=22%  Similarity=0.270  Sum_probs=79.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChh---------------hHHHHHHHHhCCccccCcceEEeC-----------
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKS---------------SVILCLENLIGMERFEGLDCFLAG-----------  231 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~---------------~~~~~l~~~~~l~~~~~fd~v~~~-----------  231 (298)
                      ++++||+.++|+.|+++|++++++||....               .....+... ++. .  .+..++.           
T Consensus        26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~--~~~~~cp~~p~~~~~~~~  101 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR-DVD-L--DGIYYCPHHPQGSVEEFR  101 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT-TCC-C--SEEEEECCBTTCSSGGGB
T ss_pred             eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhh-ccc-c--cceeeccccccccccccc
Confidence            468999999999999999999999997531               111122222 222 1  2233332           


Q ss_pred             CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeE-EEEcCCCch
Q 022348          232 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTA  287 (298)
Q Consensus       232 ~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~-v~~~~~~~~  287 (298)
                      ++....||+|.++..+++++|+++++++||||+.+|+++|++||+.+ ++++++...
T Consensus       102 ~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~  158 (182)
T d2gmwa1         102 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPI  158 (182)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCC
T ss_pred             ccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCC
Confidence            23456799999999999999999999999999999999999999975 566665543

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=2.9e-19  Score=146.94  Aligned_cols=70  Identities=16%  Similarity=0.292  Sum_probs=57.3

Q ss_pred             cceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh-hHHHHHHcCCeEEEE-cCCCchhHhhhcC
Q 022348          225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVIT-YTSSTAEQVRIID  294 (298)
Q Consensus       225 fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~-Di~~a~~aG~~~v~~-~~~~~~~~~~~~~  294 (298)
                      ++.....+....+||+|.+|+.+++++|++|++|+||||++. |+++|+++||++|++ +|....+++....
T Consensus       163 ~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~  234 (250)
T d2c4na1         163 IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMP  234 (250)
T ss_dssp             HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCS
T ss_pred             HHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCC
Confidence            344444455667899999999999999999999999999985 999999999999966 4556676666543

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.75  E-value=9.5e-18  Score=133.32  Aligned_cols=101  Identities=25%  Similarity=0.285  Sum_probs=84.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCC----------CCCCCCCCHHHHHH
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD----------DVKQKKPDPSIYVT  246 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~----------~~~~~KP~~~~~~~  246 (298)
                      ...+++|+.+++..++.+|..++++|+..........+.+ +...+  +...+..+          ....+++++.....
T Consensus        73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (210)
T d1j97a_          73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL-GLDYA--FANRLIVKDGKLTGDVEGEVLKENAKGEILEK  149 (210)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEEEETTEEEEEEECSSCSTTHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhcc-chhhh--hhhhhccccccccccccccccccccccchhhh
Confidence            3478999999999999999999999999988888888887 66654  44333322          23456777889999


Q ss_pred             HHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       247 ~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      +++++++.++++++|||+.||+.|++.+|++.++
T Consensus       150 ~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~  183 (210)
T d1j97a_         150 IAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF  183 (210)
T ss_dssp             HHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE
T ss_pred             HHHHhcccccceEEecCCcChHHHHHHCCCCEEE
Confidence            9999999999999999999999999999998655

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.74  E-value=1e-17  Score=145.59  Aligned_cols=103  Identities=24%  Similarity=0.375  Sum_probs=88.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCC-----------CCCCCCCHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD-----------VKQKKPDPSIYVTA  247 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~-----------~~~~KP~~~~~~~~  247 (298)
                      .++||+.++|+.|+++|++++++||.....++.+++++ |+..++..+.++++++           ....||+|++|..+
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~l-gl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~  293 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL-GLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence            46679999999999999999999999999999999999 9998844445665543           46789999999998


Q ss_pred             HHH--------------hCCCCCcEEEEecChhhHHHHHHcCCeEEEEc
Q 022348          248 AKR--------------LGISEKDCLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       248 ~~~--------------lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      +..              +++.+++|+||||+.+|+.+|+++|+.+|++.
T Consensus       294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~  342 (380)
T d1qyia_         294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL  342 (380)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEe
Confidence            754              45678899999999999999999999998663

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.73  E-value=1.4e-17  Score=136.99  Aligned_cols=62  Identities=21%  Similarity=0.390  Sum_probs=52.1

Q ss_pred             CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh-hHHHHHHcCCeEEEEc-CCCchhHhhhcC
Q 022348          233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITY-TSSTAEQVRIID  294 (298)
Q Consensus       233 ~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~-Di~~a~~aG~~~v~~~-~~~~~~~~~~~~  294 (298)
                      ....+||+|.+|+.+++++|++|++|+||||+.. |+++|+++||.+|++. |....+++...+
T Consensus       175 ~~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~  238 (253)
T d1wvia_         175 PIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALP  238 (253)
T ss_dssp             CEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCS
T ss_pred             eEEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcC
Confidence            3345699999999999999999999999999985 9999999999999664 445566666554

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.71  E-value=3.5e-17  Score=135.07  Aligned_cols=60  Identities=18%  Similarity=0.414  Sum_probs=51.1

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecCh-hhHHHHHHcCCeEEEEcC-CCchhHhhhcC
Q 022348          235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYT-SSTAEQVRIID  294 (298)
Q Consensus       235 ~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~~aG~~~v~~~~-~~~~~~~~~~~  294 (298)
                      ..+||+|.+|..+++++|++|++|+||||++ +|+.+|+++||.+|++.. ....+++...+
T Consensus       182 ~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~  243 (261)
T d1vjra_         182 IAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAE  243 (261)
T ss_dssp             ECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCS
T ss_pred             ccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcC
Confidence            3579999999999999999999999999997 599999999999997654 45566665544

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.68  E-value=3e-18  Score=141.00  Aligned_cols=67  Identities=18%  Similarity=0.274  Sum_probs=53.6

Q ss_pred             EEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh-hHHHHHHcCCeEEEEcCCC-chhHhhhcC
Q 022348          228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSS-TAEQVRIID  294 (298)
Q Consensus       228 v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~-Di~~a~~aG~~~v~~~~~~-~~~~~~~~~  294 (298)
                      +..+.....+||+|.+|+.+++++|++|++|+||||+++ |+++|+++||.++++.++. ..+++.+..
T Consensus       170 ~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~  238 (253)
T d1yv9a1         170 ATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLP  238 (253)
T ss_dssp             HHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCS
T ss_pred             cccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcC
Confidence            344445567899999999999999999999999999975 9999999999999775543 344444443

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.65  E-value=2.5e-16  Score=124.61  Aligned_cols=165  Identities=13%  Similarity=0.101  Sum_probs=106.8

Q ss_pred             ccEEEEecCCccccchhHHHHHHHHHHhhcCCCCCCCccccCCCChHHHHHHHHHhcCChhhHHHHHHHcCCCCCcccCC
Q 022348           67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDN  146 (298)
Q Consensus        67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~  146 (298)
                      +|+|+|||||||+++      .|.+.+++.|+.....++++.....+....           -...+...+..       
T Consensus         2 mkli~fDlDGTLl~e------~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~-----------~v~ll~~~~~~-------   57 (206)
T d1rkua_           2 MEIACLDLEGVLVPE------IWIAFAEKTGIDALKATTRDIPDYDVLMKQ-----------RLRILDEHGLK-------   57 (206)
T ss_dssp             CEEEEEESBTTTBCC------HHHHHHHHHTCGGGGCCTTTCCCHHHHHHH-----------HHHHHHHTTCC-------
T ss_pred             cEEEEEcCccchHHH------HHHHHHHHcCCHHHHHHCCCCCCHHHHHHH-----------HHHHHHhCCCc-------
Confidence            589999999999974      466667788887655555543221111100           01111221111       


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcc
Q 022348          147 PPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD  226 (298)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd  226 (298)
                                        .......   .......++....+..++ .+.+++++|.+...........+ +....  +.
T Consensus        58 ------------------~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~-~~~~~--~~  112 (206)
T d1rkua_          58 ------------------LGDIQEV---IATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQL-GFPTL--LC  112 (206)
T ss_dssp             ------------------HHHHHHH---HTTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHT-TCCCE--EE
T ss_pred             ------------------eehhhhh---hhhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHh-CCchh--hc
Confidence                              1111111   234578888888887765 67999999999988888777776 66554  22


Q ss_pred             eEEeCCC----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          227 CFLAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       227 ~v~~~~~----~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ..+....    .....+++......++++|++++++++|||+.||++|.+.||++.++
T Consensus       113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm  170 (206)
T d1rkua_         113 HKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             EEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             ceeeeecccccccccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE
Confidence            2222211    11233445567788899999999999999999999999999999777

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.62  E-value=1.3e-15  Score=114.66  Aligned_cols=102  Identities=14%  Similarity=0.066  Sum_probs=72.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhh---HHHHHHHH----hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHh
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENL----IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL  251 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~---~~~~l~~~----~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l  251 (298)
                      .++||+.++|+.|+++|++++++||.....   ....++..    ..+.. ..++... ....+..+|+.......+.++
T Consensus        36 ~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~d~~~k~~~l~~~  113 (149)
T d1ltqa1          36 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAG-VPLVMQC-QREQGDTRKDDVVKEEIFWKH  113 (149)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTC-CCCSEEE-ECCTTCCSCHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCC-CcEEEee-cccccccCCchHHHHHHHHHh
Confidence            589999999999999999999999976322   22223221    01111 1133333 333455677788888888888


Q ss_pred             CCCCCc-EEEEecChhhHHHHHHcCCeEEEEc
Q 022348          252 GISEKD-CLVVEDSVIGLQAATRAGMACVITY  282 (298)
Q Consensus       252 gi~~~~-~~~vgD~~~Di~~a~~aG~~~v~~~  282 (298)
                      .....+ +++|||+..|+++|+++|++|+.+.
T Consensus       114 ~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~  145 (149)
T d1ltqa1         114 IAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA  145 (149)
T ss_dssp             TTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred             ccCCCceEEEEcCCHHHHHHHHHCCCcEEEeC
Confidence            776655 5678999999999999999999663

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.43  E-value=1.3e-15  Score=122.52  Aligned_cols=50  Identities=24%  Similarity=0.151  Sum_probs=43.7

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       234 ~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      .+.+.+++.+++.+++++|++++++++|||+.||+.|++.+|+.+++.++
T Consensus       147 ~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na  196 (230)
T d1wr8a_         147 KKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA  196 (230)
T ss_dssp             ECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             eeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEECCC
Confidence            34667889999999999999999999999999999999999998655333

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.34  E-value=6.3e-12  Score=104.06  Aligned_cols=52  Identities=17%  Similarity=0.157  Sum_probs=44.1

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      --+..+++.+++++|++++++++|||+.||+.|.+.+|..+++-++....++
T Consensus       212 ~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~  263 (285)
T d1nrwa_         212 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKS  263 (285)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHH
T ss_pred             chhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHH
Confidence            3457899999999999999999999999999999999999876666543333

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=8.4e-12  Score=96.60  Aligned_cols=95  Identities=21%  Similarity=0.303  Sum_probs=75.4

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCC--------hhh----HHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHH
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAAT--------KSS----VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA  247 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~--------~~~----~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~  247 (298)
                      ++|++.+.|+.|.++|+.++|+||..        ...    ....++.+ +..    ++..++.......||.+.++..+
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l-~~~----~~i~~~~~~~~~RKP~~GM~~~~  125 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKL-GVP----FQVLVATHAGLNRKPVSGMWDHL  125 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHH-TSC----CEEEEECSSSSSSTTSTHHHHHH
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHc-CCC----ccEEEecCccccCCCccHHHHHH
Confidence            57999999999999999999999952        222    23344444 432    35556656667899999999999


Q ss_pred             HHHhC----CCCCcEEEEecCh-----------------hhHHHHHHcCCeEE
Q 022348          248 AKRLG----ISEKDCLVVEDSV-----------------IGLQAATRAGMACV  279 (298)
Q Consensus       248 ~~~lg----i~~~~~~~vgD~~-----------------~Di~~a~~aG~~~v  279 (298)
                      +++++    ++.++++||||..                 .|++.|+++|++..
T Consensus       126 ~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         126 QEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             HHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             HHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            99975    8899999999953                 89999999999964

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.29  E-value=9.9e-14  Score=111.40  Aligned_cols=48  Identities=8%  Similarity=-0.016  Sum_probs=41.3

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      .+..+..+.+.+++++|++++++++|||+.||+.|++.+|..+++.++
T Consensus       148 ~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na  195 (225)
T d1l6ra_         148 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANA  195 (225)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTS
T ss_pred             CccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCC
Confidence            334557899999999999999999999999999999999988665444

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=99.26  E-value=4.8e-12  Score=103.99  Aligned_cols=50  Identities=12%  Similarity=0.120  Sum_probs=42.9

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          237 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       237 ~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      +--+..+++.+++++|++++++++|||+.||+.|.+.+|..+++-++...
T Consensus       188 ~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~  237 (267)
T d1nf2a_         188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEK  237 (267)
T ss_dssp             TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHH
T ss_pred             CCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHH
Confidence            34457899999999999999999999999999999999998766555433

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=99.17  E-value=1.4e-11  Score=101.17  Aligned_cols=46  Identities=15%  Similarity=0.196  Sum_probs=40.8

Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          239 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       239 P~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      -+..+.+.+++.++++++++++|||+.||+.|.+.+|..+++-++.
T Consensus       197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~  242 (271)
T d1rkqa_         197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAI  242 (271)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC
T ss_pred             CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCC
Confidence            3567999999999999999999999999999999999997665544

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=99.15  E-value=5.4e-11  Score=92.18  Aligned_cols=95  Identities=16%  Similarity=0.136  Sum_probs=66.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChh---hHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCC
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKS---SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS  254 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~---~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~  254 (298)
                      ..+.||+.++++.++++|++++.+||....   .....|++.+|+.....-+.++.+++  ..|..   -+..++++++ 
T Consensus        85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~~---rr~~Ik~y~I-  158 (209)
T d2b82a1          85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQNT---KSQWLQDKNI-  158 (209)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCCC---SHHHHHHTTE-
T ss_pred             cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCchH---HHHHHHHcCe-
Confidence            357899999999999999999999997643   33344443226643222344554433  12222   3344567887 


Q ss_pred             CCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          255 EKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       255 ~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                         .+++||..+|+.+|..+|+.+|-+
T Consensus       159 ---~l~~GD~l~Df~aA~eagi~~iRi  182 (209)
T d2b82a1         159 ---RIFYGDSDNDITAARDVGARGIRI  182 (209)
T ss_dssp             ---EEEEESSHHHHHHHHHTTCEEEEC
T ss_pred             ---EEEecCCHHHHhHHHHcCCCceEe
Confidence               789999999999999999999955

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=99.12  E-value=7.6e-11  Score=96.62  Aligned_cols=52  Identities=13%  Similarity=0.095  Sum_probs=44.3

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchhH
Q 022348          238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ  289 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~~  289 (298)
                      --+..+++.+++++|++++++++|||+.||++|.+.+|..+++-++....++
T Consensus       189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~  240 (269)
T d1rlma_         189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQ  240 (269)
T ss_dssp             CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHH
T ss_pred             hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHH
Confidence            3457899999999999999999999999999999999999877666544333

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=99.10  E-value=5.3e-11  Score=98.07  Aligned_cols=52  Identities=15%  Similarity=0.107  Sum_probs=43.8

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCch
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA  287 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~  287 (298)
                      ...-+...+..+++.++++++++++|||+.||+.|.+.+|..+++-++....
T Consensus       204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~  255 (283)
T d2b30a1         204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSA  255 (283)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHH
T ss_pred             CcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHH
Confidence            3445678999999999999999999999999999999999987765554333

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.09  E-value=4.5e-11  Score=97.65  Aligned_cols=49  Identities=8%  Similarity=0.113  Sum_probs=42.2

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCC
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      .+-.+..+++.+++++|++++++++|||+.||+.|.+.+|..+++-++.
T Consensus       183 ~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~  231 (260)
T d2rbka1         183 KGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAK  231 (260)
T ss_dssp             TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC
T ss_pred             CCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCC
Confidence            3445678999999999999999999999999999999999987655544

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.06  E-value=8.3e-11  Score=94.64  Aligned_cols=49  Identities=6%  Similarity=-0.031  Sum_probs=41.3

Q ss_pred             CCCHHHHHHHHHHh-CCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCc
Q 022348          238 KPDPSIYVTAAKRL-GISEKDCLVVEDSVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       238 KP~~~~~~~~~~~l-gi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      -.+..+...+++++ ++.++++++|||+.||++|.+.+|..+++-+....
T Consensus       178 ~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na~~~  227 (243)
T d1wzca1         178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHK  227 (243)
T ss_dssp             CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCT
T ss_pred             hccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCCChH
Confidence            34577889999998 48889999999999999999999999877665444

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=4e-10  Score=92.74  Aligned_cols=101  Identities=13%  Similarity=0.082  Sum_probs=67.8

Q ss_pred             HHhcCCCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEe----CCCCC----------CC
Q 022348          172 IIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA----GDDVK----------QK  237 (298)
Q Consensus       172 ~~~~~~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~----~~~~~----------~~  237 (298)
                      .+....+.+.||+.+++..|+++|++++|+|++....++..++++ ++..- . -.|++    -++.+          ..
T Consensus       128 ~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~l-g~~~~-n-i~I~sN~l~f~~~~~~~~~~~~~i~~  204 (291)
T d2bdua1         128 IVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQA-GVYHS-N-VKVVSNFMDFDENGVLKGFKGELIHV  204 (291)
T ss_dssp             HHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHT-TCCBT-T-EEEEEECEEECTTSBEEEECSSCCCT
T ss_pred             HHHhcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHc-CCCcc-C-ceEEeeEEEEeCCeeEeeccCCcccc
Confidence            333446789999999999999999999999999999999999998 77531 0 01222    01100          11


Q ss_pred             CCCHHHHHHHHH--HhCCCCCcEEEEecChhhHHHHHHcC
Q 022348          238 KPDPSIYVTAAK--RLGISEKDCLVVEDSVIGLQAATRAG  275 (298)
Q Consensus       238 KP~~~~~~~~~~--~lgi~~~~~~~vgD~~~Di~~a~~aG  275 (298)
                      .-+-........  +..-..++++++||+.+|+.||..+.
T Consensus       205 ~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~  244 (291)
T d2bdua1         205 FNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA  244 (291)
T ss_dssp             TCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred             ccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence            111122222222  22335678999999999999998764

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=99.03  E-value=5.7e-10  Score=89.95  Aligned_cols=53  Identities=11%  Similarity=0.089  Sum_probs=43.6

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       236 ~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      .+.-+..+.+.+++++|++++++++|||+.||+.|.+.+|..+++-+.....+
T Consensus       159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk  211 (244)
T d1s2oa1         159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELL  211 (244)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHH
T ss_pred             CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHH
Confidence            33445789999999999999999999999999999999998876545444443

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=98.88  E-value=9e-10  Score=87.62  Aligned_cols=44  Identities=9%  Similarity=-0.055  Sum_probs=35.6

Q ss_pred             CCCCHHHHHHHHH---HhCCCCCcEEEEecChhhHHHHHHcCCeEEE
Q 022348          237 KKPDPSIYVTAAK---RLGISEKDCLVVEDSVIGLQAATRAGMACVI  280 (298)
Q Consensus       237 ~KP~~~~~~~~~~---~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~  280 (298)
                      ...+....+.+++   ++|++++++++|||+.||++|.+.+|..+++
T Consensus       182 ~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV  228 (232)
T d1xvia_         182 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV  228 (232)
T ss_dssp             TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC
T ss_pred             CchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEEE
Confidence            3444666666664   5799999999999999999999999997643

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=98.74  E-value=5.6e-07  Score=77.33  Aligned_cols=107  Identities=14%  Similarity=0.133  Sum_probs=79.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHh------CCccccCcceEEeCCC-----------------C
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI------GMERFEGLDCFLAGDD-----------------V  234 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~------~l~~~~~fd~v~~~~~-----------------~  234 (298)
                      +...|.+..+|.+||++|.++.++||+.-..+...++.+.      |-+.-.-||.||....                 -
T Consensus       184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~  263 (458)
T d2bdea1         184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN  263 (458)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTT
T ss_pred             hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCC
Confidence            3457899999999999999999999999999999998887      3232223999887532                 0


Q ss_pred             C----CCCCC-H-----HHHHHHHHHhCCCCCcEEEEecCh-hhHHHHH-HcCCeEEEEcCC
Q 022348          235 K----QKKPD-P-----SIYVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYTS  284 (298)
Q Consensus       235 ~----~~KP~-~-----~~~~~~~~~lgi~~~~~~~vgD~~-~Di~~a~-~aG~~~v~~~~~  284 (298)
                      +    ..++. +     --...+.+-+|...+++++|||+. .||..++ ..||.|+.+--.
T Consensus       264 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  325 (458)
T d2bdea1         264 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  325 (458)
T ss_dssp             CCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred             CccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence            0    00110 0     126677788899999999999999 5988776 579999966443

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=98.70  E-value=2.6e-08  Score=75.77  Aligned_cols=90  Identities=17%  Similarity=0.209  Sum_probs=72.7

Q ss_pred             HHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecChh
Q 022348          187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI  266 (298)
Q Consensus       187 ~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~~~vgD~~~  266 (298)
                      .+..|+..|+.++++|......+....+.+ ++...      +.     ..+++...++.+++++|+++++|+||||+.|
T Consensus        40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l-~~~~~------~~-----~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~n  107 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRDSPILRRRIADL-GIKLF------FL-----GKLEKETACFDLMKQAGVTAEQTAYIGDDSV  107 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCCCHHHHHHHHHH-TCCEE------EE-----SCSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             HHHHHhhhcEEEEEecCCchhHHHHHHhhh-ccccc------cc-----ccccHHHHHHHHHHHhcCCcceeEEecCCcc
Confidence            477888999999999999988888888877 55432      22     2356678899999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEEcCCCchh
Q 022348          267 GLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       267 Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      |+++.+.+|+..++.++....+
T Consensus       108 Dl~~l~~~g~siap~nA~~~vk  129 (177)
T d1k1ea_         108 DLPAFAACGTSFAVADAPIYVK  129 (177)
T ss_dssp             GHHHHHHSSEEEECTTSCHHHH
T ss_pred             HHHHHhhCCeEEEcCCccHHHH
Confidence            9999999999876655544333

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.70  E-value=8.4e-08  Score=69.34  Aligned_cols=90  Identities=17%  Similarity=0.150  Sum_probs=70.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCcE
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC  258 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~~  258 (298)
                      .+.|++.+.++.|++.|++++++|+........+.+.+ |++.+      +.       .-.|+-...+.+++.-. ..+
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~l-gI~~v------~~-------~~~p~~k~~~v~~~q~~-~~v   85 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLDLV------IA-------EVLPHQKSEEVKKLQAK-EVV   85 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE------EC-------SCCHHHHHHHHHHHTTT-SCE
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhh-hhhhh------cc-------ccchhHHHHHHHHHHcC-CEE
Confidence            58899999999999999999999999999898888888 87644      21       12244444555665533 578


Q ss_pred             EEEecChhhHHHHHHcCCeEEEEcC
Q 022348          259 LVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       259 ~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      .||||+.||..+.+.+++...+..+
T Consensus        86 ~~vGDg~nD~~aL~~Advgia~~~~  110 (135)
T d2b8ea1          86 AFVGDGINDAPALAQADLGIAVGSG  110 (135)
T ss_dssp             EEEECSSSSHHHHHHSSEEEEECCC
T ss_pred             EEEeCCCCcHHHHHhCCeeeecCcc
Confidence            9999999999999999998655443

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.8e-07  Score=72.40  Aligned_cols=91  Identities=19%  Similarity=0.262  Sum_probs=60.7

Q ss_pred             CCCCChhHHHHHHHHHHCC-CeEEEEeCCChh------hHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHH
Q 022348          177 TVEPRPGVLRLMDEAKAAG-KKVAVCSAATKS------SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAK  249 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g-~~i~i~S~~~~~------~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~  249 (298)
                      .++++||+.+++..|++.| ..+.++|.....      .-...++++.+-...  ...+++.+     |-          
T Consensus        72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~--~~~~~t~~-----K~----------  134 (195)
T d1q92a_          72 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFL--EQIVLTRD-----KT----------  134 (195)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGG--GGEEECSC-----ST----------
T ss_pred             hCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCc--cEEEEccc-----cc----------
Confidence            4689999999999999865 467888876432      122346665333222  23444332     31          


Q ss_pred             HhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcCCCchh
Q 022348          250 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE  288 (298)
Q Consensus       250 ~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~~~~~~  288 (298)
                      .+..    -++|+|++.+++.+..+|+.+++...+++..
T Consensus       135 ~~~~----d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~  169 (195)
T d1q92a_         135 VVSA----DLLIDDRPDITGAEPTPSWEHVLFTACHNQH  169 (195)
T ss_dssp             TSCC----SEEEESCSCCCCSCSSCSSEEEEECCTTTTT
T ss_pred             eecC----eEEecCcHHHHHHHhcCCCeEEEECCCcccC
Confidence            1121    2899999999999999999999887766654

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=3.7e-08  Score=78.40  Aligned_cols=43  Identities=7%  Similarity=-0.173  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEec----ChhhHHHHHHcCCeEEEEcCCCc
Q 022348          241 PSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITYTSST  286 (298)
Q Consensus       241 ~~~~~~~~~~lgi~~~~~~~vgD----~~~Di~~a~~aG~~~v~~~~~~~  286 (298)
                      ..+.+.+   ++++++++++|||    +.||++|.+.+|..++++.++..
T Consensus       187 g~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~  233 (243)
T d2amya1         187 RYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED  233 (243)
T ss_dssp             GGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH
T ss_pred             HHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH
Confidence            3344444   4778999999999    67999999999977677766433

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.31  E-value=1.1e-06  Score=65.91  Aligned_cols=102  Identities=18%  Similarity=0.207  Sum_probs=71.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccC--cceEEeCCCC----------------CCCCCC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG--LDCFLAGDDV----------------KQKKPD  240 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~--fd~v~~~~~~----------------~~~KP~  240 (298)
                      ++.|++.+.++.|++.|++++++|+.....+..+.+++ |+.....  .+..+.+.+.                ....-.
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~-Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~   98 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI-GIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE   98 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHc-CCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence            57899999999999999999999999999999999998 8753210  1111111110                011233


Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEE
Q 022348          241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT  281 (298)
Q Consensus       241 ~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~  281 (298)
                      |+--..+.+.+.-....+.|+||+.||..+.+.|.+...+.
T Consensus        99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~  139 (168)
T d1wpga2          99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG  139 (168)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET
T ss_pred             hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec
Confidence            44444444444434467999999999999999999886553

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=3e-07  Score=72.81  Aligned_cols=44  Identities=2%  Similarity=-0.203  Sum_probs=32.4

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEecCh----hhHHHHHHcCCeEEEEcC
Q 022348          237 KKPDPSIYVTAAKRLGISEKDCLVVEDSV----IGLQAATRAGMACVITYT  283 (298)
Q Consensus       237 ~KP~~~~~~~~~~~lgi~~~~~~~vgD~~----~Di~~a~~aG~~~v~~~~  283 (298)
                      +-.+..+++.++   +.+++++++|||+.    ||++|.+.+|...+.+.+
T Consensus       183 ~vsKg~al~~L~---~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n  230 (244)
T d2fuea1         183 GWDKRYCLDSLD---QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS  230 (244)
T ss_dssp             TCSTTHHHHHHT---TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred             hccHHHHHHHHh---cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence            334456777665   45889999999974    999999999965454433

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.99  E-value=7.9e-07  Score=69.79  Aligned_cols=41  Identities=15%  Similarity=0.059  Sum_probs=30.8

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEecChhhHHHHHHcCCeEEEEcC
Q 022348          238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT  283 (298)
Q Consensus       238 KP~~~~~~~~~~~lgi~~~~~~~vgD~~~Di~~a~~aG~~~v~~~~  283 (298)
                      --+..+.+.+++     .+++++|||+.||+.|.+.+|..+.+-.|
T Consensus       158 ~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~~av~~g  198 (229)
T d1u02a_         158 VNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDALTIKVG  198 (229)
T ss_dssp             CCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTSEEEEES
T ss_pred             CCHHHHHHHHhc-----cccceeecCCCChHHHHhccCCeEEEEeC
Confidence            334566666653     36899999999999999999887655444

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.66  E-value=7.8e-05  Score=52.19  Aligned_cols=48  Identities=21%  Similarity=0.310  Sum_probs=36.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCC---------------hhhHHHHHHHHhCCccccCcceEEeC
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFLAG  231 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~---------------~~~~~~~l~~~~~l~~~~~fd~v~~~  231 (298)
                      .|.+++.+.|..|++.|+++.+.|+..               .......|+.+ |+.    ||.++.+
T Consensus        24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~-gI~----Yd~Li~g   86 (124)
T d1xpja_          24 LPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKH-QVP----YDEILVG   86 (124)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHT-TCC----CSEEEEC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHc-CCC----ceEEEEC
Confidence            588999999999999999999999884               23355567776 763    5766653

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.45  E-value=0.00018  Score=50.27  Aligned_cols=38  Identities=11%  Similarity=0.040  Sum_probs=31.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL  216 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~  216 (298)
                      .+.|++.+.|..|+++|+.+.+.|+..........+.+
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL   58 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC   58 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHH
Confidence            47889999999999999999999999876555545444

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.52  E-value=0.11  Score=39.79  Aligned_cols=42  Identities=12%  Similarity=0.079  Sum_probs=35.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       177 ~~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+.+.||+.++|+.+++. .+.+|+|.+-.+.++.....+ |..
T Consensus        79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~-gfp  120 (308)
T d1y8aa1          79 SAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMI-GVR  120 (308)
T ss_dssp             HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHT-TCC
T ss_pred             ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhc-CCC
Confidence            468999999999999988 889999998888888777776 663

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.00088  Score=50.21  Aligned_cols=95  Identities=15%  Similarity=0.120  Sum_probs=67.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHhCCCCCc
Q 022348          178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD  257 (298)
Q Consensus       178 ~~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~lgi~~~~  257 (298)
                      +..+||+.++|+.+.+. +.++|.|.+....+..+++.+ .-...  |...+..+.....+.   .+.+-++.+|-+.++
T Consensus        54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~l-dp~~~--~~~~~~r~~c~~~~~---~~~KdL~~l~~~l~~  126 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL-DKWGA--FRARLFRESCVFHRG---NYVKDLSRLGRDLRR  126 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH-CSSCC--EEEEECGGGSEEETT---EEECCGGGSCSCGGG
T ss_pred             EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHh-ccCCc--eeEEEEeeeeeecCC---cccccHhhcCCCHHH
Confidence            46899999999999988 999999999999999999988 44443  444444332211111   122245677888999


Q ss_pred             EEEEecChhhHHHHHHcCCeEE
Q 022348          258 CLVVEDSVIGLQAATRAGMACV  279 (298)
Q Consensus       258 ~~~vgD~~~Di~~a~~aG~~~v  279 (298)
                      +++|+|++.-...-...|+..-
T Consensus       127 vvivDd~~~~~~~~~~N~I~I~  148 (181)
T d1ta0a_         127 VLILDNSPASYVFHPDNAVPVA  148 (181)
T ss_dssp             EEEECSCGGGGTTCGGGBCCCC
T ss_pred             eEEEcCChhhhhcCccCeeEec
Confidence            9999999986655445566543

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=92.57  E-value=0.11  Score=40.47  Aligned_cols=49  Identities=24%  Similarity=0.277  Sum_probs=40.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEe
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA  230 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~  230 (298)
                      .+.|.+.++|++|+++|++++++|+.....+...++.+ ++...  ++.+++
T Consensus        21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l-~l~~~--~~~~i~   69 (271)
T d1rkqa_          21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKEL-HMEQP--GDYCIT   69 (271)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHT-TCCST--TCEEEE
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHh-cCcCC--CcEEEE
Confidence            46688999999999999999999999999899999887 77654  444443

>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: ThiG-like
family: ThiG-like
domain: Thiazole biosynthesis protein ThiG
species: Bacillus subtilis [TaxId: 1423]

Probab=91.01  E-value=2.4  Score=31.98  Aligned_cols=95  Identities=15%  Similarity=0.135  Sum_probs=70.0

Q ss_pred             CCCChhHHHHHH---HHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCC--CCCCCHHHHHHHHHHhC
Q 022348          178 VEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK--QKKPDPSIYVTAAKRLG  252 (298)
Q Consensus       178 ~~~~pg~~~~l~---~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~--~~KP~~~~~~~~~~~lg  252 (298)
                      ..++|+..++++   .|-+.|+.+..+++.+....+ .|+.. |-.     -..--+..+|  .+--+|..++.+.++..
T Consensus       105 ~~L~PD~~etl~Aae~Lv~eGF~VlpY~~~D~v~ak-~Le~~-Gc~-----avMPlgsPIGSg~Gl~n~~~l~~i~~~~~  177 (251)
T d1xm3a_         105 RSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLAR-KLEEL-GVH-----AIMPGASPIGSGQGILNPLNLSFIIEQAK  177 (251)
T ss_dssp             TTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHH-HHHHH-TCS-----CBEECSSSTTCCCCCSCHHHHHHHHHHCS
T ss_pred             CCcCCCHHHHHHHHHHHHhCCcEEEEecCCCHHHHH-HHHHc-CCh-----hHHHhhhhhhcCCCcCChHHHHHHHhcCC
Confidence            358888888875   577899999999999988554 45555 432     1222233333  56678999999999987


Q ss_pred             CCCCcEEEEecCh---hhHHHHHHcCCeEEEEcC
Q 022348          253 ISEKDCLVVEDSV---IGLQAATRAGMACVITYT  283 (298)
Q Consensus       253 i~~~~~~~vgD~~---~Di~~a~~aG~~~v~~~~  283 (298)
                      ++    +.|+=+.   +|...|-..|+..|++|+
T Consensus       178 vP----vIvDAGIG~pSdAa~AMElG~daVLvNT  207 (251)
T d1xm3a_         178 VP----VIVDAGIGSPKDAAYAMELGADGVLLNT  207 (251)
T ss_dssp             SC----BEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred             cc----EEEecCCCCHHHHHHHHHccCCEEEech
Confidence            64    6777554   799999999999998875

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=89.82  E-value=0.053  Score=39.83  Aligned_cols=16  Identities=31%  Similarity=0.650  Sum_probs=14.5

Q ss_pred             CccEEEEecCCccccc
Q 022348           66 SLQALIFDCDGVIIES   81 (298)
Q Consensus        66 ~~k~viFD~DGTL~d~   81 (298)
                      .+|+++||+||||.|.
T Consensus         4 ~ik~~i~DvDGVlTDG   19 (177)
T d1k1ea_           4 NIKFVITDVDGVLTDG   19 (177)
T ss_dssp             GCCEEEEECTTTTSCS
T ss_pred             cCeEEEEccCCcccCC
Confidence            6899999999999874

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=87.87  E-value=0.32  Score=36.30  Aligned_cols=42  Identities=17%  Similarity=0.283  Sum_probs=36.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCcc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER  221 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~  221 (298)
                      .+.+...++|++|+++|+.++++|+.....+...++.+ ++..
T Consensus        21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~-~~~~   62 (232)
T d1xvia_          21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTL-GLQG   62 (232)
T ss_dssp             CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHT-TCTT
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHh-ccCC
Confidence            35677899999999999999999999999999999887 7653

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=87.46  E-value=0.27  Score=37.72  Aligned_cols=41  Identities=10%  Similarity=0.166  Sum_probs=31.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHH---HHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~---~~l~~~~~l~  220 (298)
                      .++|++.++|+.|+++|+++.++||+......   ..++.+ |++
T Consensus        19 ~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~-G~~   62 (250)
T d2c4na1          19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATA-GVD   62 (250)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHT-TCC
T ss_pred             CcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhc-ccc
Confidence            57789999999999999999999997744333   445555 554

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.41  E-value=0.28  Score=37.69  Aligned_cols=37  Identities=16%  Similarity=0.182  Sum_probs=29.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHH
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN  215 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~  215 (298)
                      ...|++.++|++|++.|++++++||+.........++
T Consensus        18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~   54 (253)
T d1yv9a1          18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR   54 (253)
T ss_dssp             EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred             CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence            4668999999999999999999999775555555443

>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: PrpR receptor domain-like
family: PrpR receptor domain-like
domain: Propionate catabolism operon regulatory protein PrpR
species: Escherichia coli [TaxId: 562]

Probab=86.19  E-value=0.53  Score=34.45  Aligned_cols=85  Identities=18%  Similarity=0.205  Sum_probs=54.0

Q ss_pred             hHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCccccCcceEEeCCCCCCCCCCHHHHHHH---HHHhCCCCCcEE
Q 022348          183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA---AKRLGISEKDCL  259 (298)
Q Consensus       183 g~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~---~~~lgi~~~~~~  259 (298)
                      ++...|...++.+-++++++-.........+..+++++-    .....-        +++-.+.+   +++-|++    +
T Consensus        82 Dil~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~i----~~~~~~--------~~~e~~~~v~~l~~~G~~----v  145 (186)
T d2pjua1          82 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRL----DQRSYI--------TEEDARGQINELKANGTE----A  145 (186)
T ss_dssp             HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCE----EEEEES--------SHHHHHHHHHHHHHTTCC----E
T ss_pred             HHHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCce----EEEEec--------CHHHHHHHHHHHHHCCCC----E
Confidence            556666677777889999987765545555666546642    222111        12222223   3445764    6


Q ss_pred             EEecChhhHHHHHHcCCeEEEEcCC
Q 022348          260 VVEDSVIGLQAATRAGMACVITYTS  284 (298)
Q Consensus       260 ~vgD~~~Di~~a~~aG~~~v~~~~~  284 (298)
                      +|||+.. ...|++.|++.++++++
T Consensus       146 VVG~~~~-~~~A~~~Gl~~vli~S~  169 (186)
T d2pjua1         146 VVGAGLI-TDLAEEAGMTGIFIYSA  169 (186)
T ss_dssp             EEESHHH-HHHHHHTTSEEEESSCH
T ss_pred             EECChHH-HHHHHHcCCCEEEEeCH
Confidence            7999965 57889999999988765

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=84.65  E-value=0.4  Score=36.79  Aligned_cols=49  Identities=10%  Similarity=0.089  Sum_probs=33.8

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCChhh---HHHHHHHHhCCccccCcceEEe
Q 022348          180 PRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLA  230 (298)
Q Consensus       180 ~~pg~~~~l~~L~~~g~~i~i~S~~~~~~---~~~~l~~~~~l~~~~~fd~v~~  230 (298)
                      +.|++.++++.|++.|++++++||+....   +...++...++...  .+.+++
T Consensus        19 ~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~--~~~i~~   70 (253)
T d1wvia_          19 RIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTP--LETIYT   70 (253)
T ss_dssp             ECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCC--GGGEEE
T ss_pred             cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCcccc--cccccc
Confidence            67999999999999999999999976543   33334333354432  344544

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=84.05  E-value=0.6  Score=36.13  Aligned_cols=41  Identities=20%  Similarity=0.267  Sum_probs=35.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCChhhHHHHHHHHhCCc
Q 022348          179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME  220 (298)
Q Consensus       179 ~~~pg~~~~l~~L~~~g~~i~i~S~~~~~~~~~~l~~~~~l~  220 (298)
                      .+.+.+.+.|++|+++|++++++|+.....+...++.+ ++.
T Consensus        18 ~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l-~~~   58 (285)
T d1nrwa_          18 QVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPL-GIK   58 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGG-TCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHh-CCC
Confidence            35678999999999999999999999988888888877 664