Citrus Sinensis ID: 022403

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
MAQAEEAKEVSKLSSCDAYFEAIQSRKKLPHSLQETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEVKIS
cHHHHHHHHHccccccHHHHHHHHHHccccccHHHHHHHHHcccccccccccccccEEEECccccHHHHHHHHHHccccccccccccccccccHHHHHccEEEHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHccccccccccHHHHHHHHHHHHHHccHHHccccccccccHHHccHHHHHHHcccccccccHHHHHHHccccccCEEECccccHHHHHHHHHcccccccCEEcccccccEEEEEHHHHHHHHHHccccccHHHcccccccccccccccccccccc
****************DAYFEAIQ****LPHSLQETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAE************RLHEDFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEVK**
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MAQAEEAKEVSKLSSCDAYFEAIQSRKKLPHSLQETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEVKIS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
SNF1-related protein kinase regulatory subunit gamma-1-like Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants.probableQ9CAR3

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2V8Q, chain E
Confidence level:very confident
Coverage over the Query: 32-146,184-191,203-285
View the alignment between query and template
View the model in PyMOL
Template: 3ORG, chain A
Confidence level:confident
Coverage over the Query: 19-97,147,185-266
View the alignment between query and template
View the model in PyMOL