Citrus Sinensis ID: 022406

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
MSPTRLSLNFFFLLSFSLLIRKSFSSTAIINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSFDKIVEEGGDCTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC
ccccccccccccccccEEEEEEcccccccccccEEEEEcccccEEEEcccccHHHHHHHHHHHHccccccEEEccccccEEEcccEECccccccccccHHHHHHHHHHHHHHccccccccccEEEEEccccccccccccccccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccHHcccccEECcccccEEEEEEcccccccccccccccccccccEEEEEEEEEEccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccc
**P*RLSLNFFFLLSFSLLIRKSFSSTAIINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVA***********VRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQ******TPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSFDKIVEEGGDCTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC
xxxxxxxHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSPTRLSLNFFFLLSFSLLIRKSFSSTAIINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSFDKIVEEGGDCTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2JIG, chain A
Confidence level:very confident
Coverage over the Query: 29-249
View the alignment between query and template
View the model in PyMOL
Template: 2K72, chain A
Confidence level:confident
Coverage over the Query: 256-297
View the alignment between query and template
View the model in PyMOL