Citrus Sinensis ID: 022414

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
Protein Sequence
MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLLVCK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHccccEEEEEEEcccccccHHHHHcccccEEEEEccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHHHcccccEEEcccccEEccEEHHHHHHHHHHHHcccccccEEccccccccHHHHHHHHHHHHcccccEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccHHcccEEEEEccccHHHHHHHHHHHHcccccEEEEEcccEHHHHHHHHHHccccEEEEEEcccccEEEEEEHEEEcccccccccccccccEEEHHHHHHHHHHHHHHHHHccEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccEHHHHHHHHHccccEEEEccccccccEEEHHHHHHHHHHHHcccccccEcccccccHHHHHHHHHHHHHHccccEEEEEc
Coil and Loop (DISEMBL)
maqeisngnhnsaskppptpsplrfskFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDnyftgskdnlrkwighprfelirhdvtepllieVDQIyhlacpaspifykynpvktiKTNVIGTLNMLGLAKRVGARILLTstsevygdplvhpqdesywgnvnpigvrscYDEGKRVAETLMFDYHRQHGIEIRIARIFntygprmniddgrVVSNFIAQairgepltvqapgtqtrsfcYVSDMVDGLIRLmegentgpinignpgeFTMLELAENVKEVNFYLGRLLVCK
Flexible Loop (DISEMBL)
maqeisngnhnsaskppptpSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDnyftgskdnlrkWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSevygdplvhpqdesywgnvNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIrgepltvqapgtqtrsFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLLVCK
Low Complexity Region (SEG)
MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLLVCK
Disordered region (IsUnstruct)
************************FSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLLVC*
Disordered Region (DISOPRED)
*****************************QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYL**LLVC*
Disordered Region (DISEMBL)
*******************PSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLLVCK
Disordered Region (DISPRO)
*****************PTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLLVCK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLLVCK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	297	2.2.26 [Sep-21-2011]
Q8NBZ7	420	UDP-glucuronic acid decar	yes	no	0.848	0.6	0.687	1e-102
Q5R885	420	UDP-glucuronic acid decar	yes	no	0.848	0.6	0.687	1e-102
Q91XL3	420	UDP-glucuronic acid decar	yes	no	0.848	0.6	0.687	1e-102
Q5PQX0	420	UDP-glucuronic acid decar	yes	no	0.848	0.6	0.687	1e-102
Q6DF08	421	UDP-glucuronic acid decar	yes	no	0.936	0.660	0.614	1e-101
Q6GMI9	418	UDP-glucuronic acid decar	yes	no	0.848	0.602	0.679	1e-101
Q57664	305	Putative UDP-glucose 4-ep	yes	no	0.814	0.793	0.348	1e-27
A4WAM3	660	Bifunctional polymyxin re	yes	no	0.818	0.368	0.309	2e-24
Q6D2F1	673	Bifunctional polymyxin re	yes	no	0.845	0.372	0.297	3e-24
C6DAW5	672	Bifunctional polymyxin re	yes	no	0.845	0.373	0.293	6e-24

>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1

 Score =  372 bits (956), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/253 (68%), Positives = 209/253 (82%), Gaps = 1/253 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 90  RILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328

Query: 274 FTMLELAENVKEV 286
            T+LE A+ +K +
Sbjct: 329 HTILEFAQLIKNL 341

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.
Homo sapiens (taxid: 9606)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 5

>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1

 Score =  372 bits (956), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/253 (68%), Positives = 209/253 (82%), Gaps = 1/253 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 90  RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328

Query: 274 FTMLELAENVKEV 286
            T+LE A+ +K +
Sbjct: 329 HTILEFAQLIKNL 341

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1

 Score =  372 bits (955), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/253 (68%), Positives = 209/253 (82%), Gaps = 1/253 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 90  RILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328

Query: 274 FTMLELAENVKEV 286
            T+LE A+ +K +
Sbjct: 329 HTILEFAQLIKNL 341

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1

 Score =  372 bits (954), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/253 (68%), Positives = 209/253 (82%), Gaps = 1/253 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 90  RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328

Query: 274 FTMLELAENVKEV 286
            T+LE A+ +K +
Sbjct: 329 HTILEFAQLIKNL 341

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1

 Score =  367 bits (941), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/288 (61%), Positives = 219/288 (76%), Gaps = 10/288 (3%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKN 58
           + ++I N   +   K PP        KF   +   RIL+TGGAGF+GSHL DKLM  + +
Sbjct: 63  LREKIQNLERSFTQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLM-MDGH 114

Query: 59  EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV 118
           EV VVDN+FTG K N+  WIGH  FELI HDV EPL IEVDQIYHLA PASP  Y YNP+
Sbjct: 115 EVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPI 174

Query: 119 KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE 178
           KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDE
Sbjct: 175 KTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDE 234

Query: 179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG 238
           GKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GE LTV   G
Sbjct: 235 GKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSG 294

Query: 239 TQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
            QTR+F YVSD+V+GL+ LM    + P+N+GNP E ++++ A  +K++
Sbjct: 295 EQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQL 342

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Xenopus tropicalis (taxid: 8364)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2

 Score =  367 bits (941), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 172/253 (67%), Positives = 208/253 (82%), Gaps = 1/253 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 88  RILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 146

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 147 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 206

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ+E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+G RM++
Sbjct: 207 PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHM 266

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GE LTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 267 NDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEE 326

Query: 274 FTMLELAENVKEV 286
            T+LE A+ +K +
Sbjct: 327 HTILEFAQLIKSL 339

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity). Essential during embryogenesis for craniofacial development.

Danio rerio (taxid: 7955)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0211 PE=3 SV=1

 Score =  123 bits (309), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 141/264 (53%), Gaps = 22/264 (8%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTGGAGFIGSH+VDKL+EN   +VI++DN  TG+K+N+     +P+ E +  D+ +  
Sbjct: 2   ILVTGGAGFIGSHIVDKLIENNY-DVIILDNLTTGNKNNI-----NPKAEFVNADIRDKD 55

Query: 95  LIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILLTS 146
           L E      V+ + H A   +      NPV     NV+GT+N+L + ++  +   +  +S
Sbjct: 56  LDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASS 115

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
              VYG+P   P DE++     PI   S Y   K V E  +  Y+R +GIE  I R  N 
Sbjct: 116 GGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNV 170

Query: 207 YGPRMN-IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP 265
           YG R +   +  V+S FI + ++ +   +   G QTR F YV D+    +  +  +N   
Sbjct: 171 YGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANLMALNWKNE-I 229

Query: 266 INIGNPGEFTMLELAENVK-EVNF 288
           +NIG   E ++ EL + +K E+ F
Sbjct: 230 VNIGTGKETSVNELFDIIKHEIGF 253

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|A4WAM3|ARNA_ENT38 Bifunctional polymyxin resistance protein ArnA OS=Enterobacter sp. (strain 638) GN=arnA PE=3 SV=1

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 138/268 (51%), Gaps = 25/268 (9%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L++++  EV  +D    GS D + ++IG+ RF  +  D++  
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNFEVYGLD---IGS-DAISRFIGNSRFHFVEGDISIH 372

Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPST 432

Query: 148 SEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           SEVYG     V  +D S    V PI   R  Y   K++ + +++ Y  + G+   + R F
Sbjct: 433 SEVYGMCSDKVFDEDHSNL-IVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPF 491

Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
           N  GPR++      I   R ++  I   + G P+ +   G Q R F  +SD ++ L R++
Sbjct: 492 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGRQKRCFTDISDGIEALFRII 551

Query: 259 EGENTGP----INIGNP-GEFTMLELAE 281
           E +N+      INIGNP  E ++ ELAE
Sbjct: 552 ENKNSNCDGQIINIGNPDNEASIKELAE 579

Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.

Enterobacter sp. (strain 638) (taxid: 399742)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 5

>sp|Q6D2F1|ARNA_ERWCT Bifunctional polymyxin resistance protein ArnA OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=arnA PE=3 SV=1

 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 137/276 (49%), Gaps = 25/276 (9%)

Query: 26  SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
           S+  +   R+L+ G  GFIG+HL ++L+ +++ E+  +D     S D + +++G PRF  
Sbjct: 316 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 371

Query: 86  IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
           +  D++      E  + + D I  L   A+PI Y  NP++  + +    L ++    R  
Sbjct: 372 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 431

Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
            RI+  STSEVYG  D     +D S    V PI   R  Y   K++ + +++ Y  ++G+
Sbjct: 432 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGL 490

Query: 197 EIRIARIFNTYGPRMNIDDG------RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
              + R FN  GPR++  D       R ++  I   + G P+ +   G Q R F  + D 
Sbjct: 491 RFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 550

Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
           ++ L R++E  N       INIGNP  E ++ EL E
Sbjct: 551 IEALFRVIENRNGQCDGQIINIGNPHNEASIRELGE 586

Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.

Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) (taxid: 218491)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 5

>sp|C6DAW5|ARNA_PECCP Bifunctional polymyxin resistance protein ArnA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3 SV=1

 Score =  111 bits (278), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 137/276 (49%), Gaps = 25/276 (9%)

Query: 26  SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
           S+  +   R+L+ G  GFIG+HL ++L+ +++ E+  +D     S D + +++G PRF  
Sbjct: 315 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 370

Query: 86  IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
           +  D++      E  + + D I  L   A+PI Y  NP++  + +    L ++    R  
Sbjct: 371 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 430

Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
            RI+  STSEVYG  D     +D S    V PI   R  Y   K++ + +++ Y  ++G+
Sbjct: 431 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGL 489

Query: 197 EIRIARIFNTYGPRMNIDDG------RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
              + R FN  GPR++  D       R ++  I   + G P+ +   G Q R F  + D 
Sbjct: 490 RFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 549

Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
           ++ L R++E  N       INIGNP  E ++ EL +
Sbjct: 550 IEALFRIIENRNGQCDGQIINIGNPHNEASIRELGD 585

Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.

Pectobacterium carotovorum subsp. carotovorum (strain PC1) (taxid: 561230)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	297
255575062	346	dtdp-glucose 4-6-dehydratase, putative [	0.962	0.826	0.965	1e-163
224100953	346	predicted protein [Populus trichocarpa]	0.962	0.826	0.954	1e-161
225449563	345	PREDICTED: UDP-glucuronic acid decarboxy	0.962	0.828	0.951	1e-161
224109544	346	predicted protein [Populus trichocarpa]	0.962	0.826	0.944	1e-161
192338748	346	UDP-D-glucuronate carboxy-lyase [Eucalyp	0.962	0.826	0.930	1e-159
388495536	346	unknown [Lotus japonicus]	0.962	0.826	0.919	1e-155
449459910	344	PREDICTED: UDP-glucuronic acid decarboxy	0.962	0.831	0.916	1e-155
356539032	342	PREDICTED: UDP-glucuronic acid decarboxy	0.949	0.824	0.936	1e-155
358248590	348	uncharacterized protein LOC100790835 [Gl	0.962	0.821	0.920	1e-155
60932273	343	UDP-glucuronic acid decarboxylase 3 [Pop	0.946	0.819	0.935	1e-154

>gi|255575062|ref|XP_002528436.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] gi|223532112|gb|EEF33919.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 276/286 (96%), Positives = 284/286 (99%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA+E+SNG+H+SASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV
Sbjct: 1   MAKEVSNGDHSSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IVVDNYFTGSKDNL+KWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVVDNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ+ESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQEESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+R EPLTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAVRNEPLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAE VKE+
Sbjct: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAETVKEL 286

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100953|ref|XP_002312082.1| predicted protein [Populus trichocarpa] gi|118487220|gb|ABK95438.1| unknown [Populus trichocarpa] gi|222851902|gb|EEE89449.1| predicted protein [Populus trichocarpa]

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 273/286 (95%), Positives = 281/286 (98%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA+E SNGNHNSA+K PPTPSPLRFSK+FQSNMRILVTGGAGFIGSHLVD+LMENEKNEV
Sbjct: 1   MAKEASNGNHNSATKAPPTPSPLRFSKYFQSNMRILVTGGAGFIGSHLVDRLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DNYFTGSKDNL+KWIGHPRFELIRHDVTEPLL+EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR EPLTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRNEPLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTM+ELAE VKE+
Sbjct: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMMELAETVKEL 286

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449563|ref|XP_002283871.1| PREDICTED: UDP-glucuronic acid decarboxylase 1 [Vitis vinifera] gi|147766093|emb|CAN65700.1| hypothetical protein VITISV_010481 [Vitis vinifera] gi|296086255|emb|CBI31696.3| unnamed protein product [Vitis vinifera]

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 272/286 (95%), Positives = 281/286 (98%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA+E+SNG+HNS +KPPPTPSPLR SKFFQSNMRILVTGGAGFIGSHLVDKLM+NEKNEV
Sbjct: 1   MAKEVSNGDHNSVTKPPPTPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMQNEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ+ESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQEESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE LTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGESLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           TRSFCYVSDMVDGL+RLMEG+NTGPINIGNPGEFTMLELAE VKE+
Sbjct: 241 TRSFCYVSDMVDGLVRLMEGDNTGPINIGNPGEFTMLELAETVKEL 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109544|ref|XP_002315231.1| predicted protein [Populus trichocarpa] gi|118483816|gb|ABK93800.1| unknown [Populus trichocarpa] gi|118485318|gb|ABK94518.1| unknown [Populus trichocarpa] gi|222864271|gb|EEF01402.1| predicted protein [Populus trichocarpa]

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 270/286 (94%), Positives = 282/286 (98%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           M++E SNG+HNSA+K PPTPSPLRFSKFFQSNMRIL+TGGAGFIGSHLVD+LMENEKNEV
Sbjct: 1   MSKEASNGDHNSAAKAPPTPSPLRFSKFFQSNMRILITGGAGFIGSHLVDRLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DNYFTGSKDNL+KWIGHPRFELIRHDVTEPLL+EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPL+HPQ+ESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQNESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR EPLTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRNEPLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTM+ELAENVKE+
Sbjct: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMIELAENVKEL 286

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192338748|gb|ACF04279.1| UDP-D-glucuronate carboxy-lyase [Eucalyptus grandis]

 Score =  565 bits (1457), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 266/286 (93%), Positives = 280/286 (97%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA++ SNG ++S +KPPPTPSPLRFSKFFQ NMRILVTGGAGFIGSHLVDKLMENEKNEV
Sbjct: 1   MAKQASNGENHSVAKPPPTPSPLRFSKFFQPNMRILVTGGAGFIGSHLVDKLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DN+FTG+K+NL+KWIGHPRFELIRHDVTEPLL+EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNFFTGTKENLKKWIGHPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIR+ARIFNTYGPRMNIDDGRVVSNFIAQA+RGEPLTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQAVRGEPLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTM+ELAE VKE+
Sbjct: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMIELAETVKEL 286

Source: Eucalyptus grandis

Species: Eucalyptus grandis

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495536|gb|AFK35834.1| unknown [Lotus japonicus]

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 263/286 (91%), Positives = 274/286 (95%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA + SNG+H  A K PP PSPLRFSKFFQ+NMRILVTGGAGFIGSHLVD+LMENEKNEV
Sbjct: 1   MATDSSNGDHQKAGKQPPLPSPLRFSKFFQANMRILVTGGAGFIGSHLVDRLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DN+FTGSKDNL+KWIGHPRFELIRHDVTE LL+EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNFFTGSKDNLKKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPL+HPQ ESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYH QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ PGT+
Sbjct: 181 RVAETLMFDYHTQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTR 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTM+ELAENVKE+
Sbjct: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMIELAENVKEL 286

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459910|ref|XP_004147689.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis sativus] gi|449523904|ref|XP_004168963.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis sativus]

 Score =  553 bits (1425), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/286 (91%), Positives = 276/286 (96%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA++ SNG+  +++K PP PSPLR +KFFQ+NMRILVTGGAGFIGSHLVD+LMENEKNEV
Sbjct: 1   MAKQSSNGDFYTSTKAPPPPSPLRSAKFFQANMRILVTGGAGFIGSHLVDRLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL+EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
            KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK
Sbjct: 121 TKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNF+AQAIR EPLTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFLAQAIRSEPLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           TRSFCYVSDMV+GLIRLMEG+NTGPINIGNPGEFTMLELAE VKE+
Sbjct: 241 TRSFCYVSDMVEGLIRLMEGDNTGPINIGNPGEFTMLELAETVKEL 286

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539032|ref|XP_003538004.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform 1 [Glycine max] gi|356539034|ref|XP_003538005.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform 2 [Glycine max]

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 264/282 (93%), Positives = 272/282 (96%)

Query: 5   ISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64
           ++  + N A+K PP PSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV D
Sbjct: 1   MATNSSNGATKQPPMPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVAD 60

Query: 65  NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 124
           NYFTGSKDNL++WIGHPRFELIRHDVTE LLIEVDQIYHLACPASPIFYKYNPVKTIKTN
Sbjct: 61  NYFTGSKDNLKRWIGHPRFELIRHDVTEQLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 120

Query: 125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE 184
           VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ ESYWGNVNPIGVRSCYDEGKRVAE
Sbjct: 121 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAE 180

Query: 185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF 244
           TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ PGTQTRSF
Sbjct: 181 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTQTRSF 240

Query: 245 CYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           CYVSDMVDGLIRLMEGENTGPINIGNPGEFTM+ELAENVKE+
Sbjct: 241 CYVSDMVDGLIRLMEGENTGPINIGNPGEFTMIELAENVKEL 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248590|ref|NP_001239907.1| uncharacterized protein LOC100790835 [Glycine max] gi|255641885|gb|ACU21211.1| unknown [Glycine max]

 Score =  551 bits (1421), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 265/288 (92%), Positives = 274/288 (95%), Gaps = 2/288 (0%)

Query: 1   MAQEISNGN--HNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKN 58
           MA + SNGN  H + +K PP PSPLRFSKFFQSNMRILVTGGAGFIGSHLVD+LMENEKN
Sbjct: 1   MATDSSNGNGHHQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKN 60

Query: 59  EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV 118
           EVIV DNYFTGSKDNL+KWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV
Sbjct: 61  EVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV 120

Query: 119 KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE 178
           KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ ESYWGNVNPIGVRSCYDE
Sbjct: 121 KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDE 180

Query: 179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG 238
           GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGEPLTVQ PG
Sbjct: 181 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQCPG 240

Query: 239 TQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           TQTRSFCYVSD+VDGLIRLMEG NTGPIN+GNPGEFTM ELAE VKE+
Sbjct: 241 TQTRSFCYVSDLVDGLIRLMEGSNTGPINLGNPGEFTMTELAETVKEL 288

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60932273|gb|AAX37336.1| UDP-glucuronic acid decarboxylase 3 [Populus tomentosa]

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 263/281 (93%), Positives = 269/281 (95%)

Query: 6   SNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65
           SNG+H +  KPPP+PSPLR SKF QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV DN
Sbjct: 3   SNGDHQTTVKPPPSPSPLRNSKFSQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADN 62

Query: 66  YFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNV 125
           YFTGSKDNLRKWIG PRFELIRHDVTEPLL+EVDQIYHLACPASPIFYKYNPVKTIKTNV
Sbjct: 63  YFTGSKDNLRKWIGQPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNV 122

Query: 126 IGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET 185
           IGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ ESYWGNVNPIGVRSCYDEGKRVAET
Sbjct: 123 IGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAET 182

Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC 245
           LMFDYHRQHGIE RIARIFNTYGPRMNIDDGRVVSNFIAQA+RGEPLTVQ PGTQTRSFC
Sbjct: 183 LMFDYHRQHGIEFRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFC 242

Query: 246 YVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           YVSDMVDGLIRLMEGENTGPINIGNPGEFTM ELAE VKE+
Sbjct: 243 YVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAETVKEL 283

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	297
TAIR|locus:2053275	343	UXS6 "UDP-XYL synthase 6" [Ara	0.956	0.827	0.905	3.9e-140
TAIR|locus:2078206	341	UXS5 "UDP-XYL synthase 5" [Ara	0.949	0.826	0.900	3.5e-139
TAIR|locus:2168539	357	UXS3 "UDP-glucuronic acid deca	0.925	0.770	0.912	1.3e-137
TAIR|locus:2081675	445	AUD1 "AT3G62830" [Arabidopsis	0.858	0.573	0.746	1.4e-103
UNIPROTKB|E1BV28	421	UXS1 "Uncharacterized protein"	0.885	0.624	0.671	1.8e-96
UNIPROTKB|E1BMI4	420	UXS1 "Uncharacterized protein"	0.885	0.626	0.667	5.3e-95
UNIPROTKB|F1PU61	414	UXS1 "Uncharacterized protein"	0.885	0.635	0.664	5.3e-95
UNIPROTKB|B3KV61	363	UXS1 "UDP-glucuronate decarbox	0.885	0.724	0.664	5.3e-95
UNIPROTKB|Q8NBZ7	420	UXS1 "UDP-glucuronic acid deca	0.885	0.626	0.664	5.3e-95
TIGR_CMR|GSU_1815	311	GSU_1815 "NAD-dependent epimer	0.841	0.803	0.686	5.3e-95

TAIR|locus:2053275 UXS6 "UDP-XYL synthase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1371 (487.7 bits), Expect = 3.9e-140, P = 3.9e-140
 Identities = 259/286 (90%), Positives = 270/286 (94%)

Query:     1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
             MA   SNG   + +KPPP PSPLR SKFFQSNMRILVTGGAGFIGSHLVDKLM+NEKNEV
Sbjct:     1 MASNSSNGT--TTTKPPPMPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMQNEKNEV 58

Query:    61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
             IV DNYFTGSKDNL+KWIGHPRFELIRHDVTEPL +EVDQIYHLACPASPIFYKYNPVKT
Sbjct:    59 IVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLFVEVDQIYHLACPASPIFYKYNPVKT 118

Query:   121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
             IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ ESYWGNVNPIGVRSCYDEGK
Sbjct:   119 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGK 178

Query:   181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
             RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGE LTVQ PGTQ
Sbjct:   179 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQ 238

Query:   241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
             TRSFCYVSDMV+GL+RLMEG+ TGPINIGNPGEFTM+ELAE VKE+
Sbjct:   239 TRSFCYVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAETVKEL 284

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=RCA

TAIR|locus:2078206 UXS5 "UDP-XYL synthase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1362 (484.5 bits), Expect = 3.5e-139, P = 3.5e-139
 Identities = 254/282 (90%), Positives = 271/282 (96%)

Query:     5 ISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64
             +++ +  ++ KPPP+PSPLR SKF QSNMRIL++GGAGFIGSHLVDKLMENEKNEVIV D
Sbjct:     1 MASSDKQTSPKPPPSPSPLRNSKFCQSNMRILISGGAGFIGSHLVDKLMENEKNEVIVAD 60

Query:    65 NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 124
             NYFTGSKDNL+KWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN
Sbjct:    61 NYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 120

Query:   125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE 184
             VIGTLNMLGLAKRVGARILLTSTSEVYGDPL+HPQ ESYWGNVNPIGVRSCYDEGKRVAE
Sbjct:   121 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAE 180

Query:   185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF 244
             TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGE LTVQ PGTQTRSF
Sbjct:   181 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSF 240

Query:   245 CYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
             CYVSDMVDGL+RLMEG++TGPINIGNPGEFTM+ELAE VKE+
Sbjct:   241 CYVSDMVDGLMRLMEGDDTGPINIGNPGEFTMVELAETVKEL 282

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=RCA;TAS

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2168539 UXS3 "UDP-glucuronic acid decarboxylase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
 Identities = 251/275 (91%), Positives = 265/275 (96%)

Query:    12 SASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK 71
             + +KPPP+PSPLR SKF Q NMRIL++GGAGFIGSHLVDKLMENEKNEV+V DNYFTGSK
Sbjct:    24 NTTKPPPSPSPLRNSKFCQPNMRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSK 83

Query:    72 DNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM 131
             +NL+KWIGHPRFELIRHDVTEPLLIEVD+IYHLACPASPIFYKYNPVKTIKTNVIGTLNM
Sbjct:    84 ENLKKWIGHPRFELIRHDVTEPLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNM 143

Query:   132 LGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYH 191
             LGLAKRVGARILLTSTSEVYGDPL+HPQ ESYWGNVNPIGVRSCYDEGKRVAETLMFDYH
Sbjct:   144 LGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYH 203

Query:   192 RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
             RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGE LTVQ PGTQTRSFCYVSDMV
Sbjct:   204 RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMV 263

Query:   252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
             DGLIRLMEG +TGPINIGNPGEFTM+ELAE VKE+
Sbjct:   264 DGLIRLMEGNDTGPINIGNPGEFTMVELAETVKEL 298

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0042732 "D-xylose metabolic process" evidence=RCA;IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

TAIR|locus:2081675 AUD1 "AT3G62830" [Arabidopsis thaliana (taxid:3702)]

 Score = 1026 (366.2 bits), Expect = 1.4e-103, P = 1.4e-103
 Identities = 191/256 (74%), Positives = 221/256 (86%)

Query:    30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
             +  +R++VTGGAGF+GSHLVD+LM    + VIVVDN+FTG K+N+     +P FE+IRHD
Sbjct:   116 RKGLRVVVTGGAGFVGSHLVDRLMARG-DTVIVVDNFFTGRKENVMHHFSNPNFEMIRHD 174

Query:    90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
             V EP+L+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct:   175 VVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 234

Query:   150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
             VYGDPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL  DYHR   +E+RIARIFNTYGP
Sbjct:   235 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGP 294

Query:   210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIG 269
             RM IDDGRVVSNF+AQA+R EPLTV   G QTRSF +VSD+V+GL+RLMEGE+ GP N+G
Sbjct:   295 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLG 354

Query:   270 NPGEFTMLELAENVKE 285
             NPGEFTMLELA+ V+E
Sbjct:   355 NPGEFTMLELAKVVQE 370

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS

GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS

GO:0016020 "membrane" evidence=TAS

GO:0042732 "D-xylose metabolic process" evidence=IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|E1BV28 UXS1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
 Identities = 178/265 (67%), Positives = 217/265 (81%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    80 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 137

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:   138 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 197

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ+E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   198 LLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 257

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV  PGTQTR+F YVSD+V+GL+ LM   
Sbjct:   258 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNSN 317

Query:   262 NTGPINIGNPGEFTMLELAENVKEV 286
              + P+N+GNP E T+LE A+ +K++
Sbjct:   318 VSSPVNLGNPEEHTILEFAQLIKKL 342

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E1BMI4 UXS1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
 Identities = 177/265 (66%), Positives = 214/265 (80%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RILVTGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    79 PVKFLSE-KDRKRILVTGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:   137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   197 LLLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM   
Sbjct:   257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316

Query:   262 NTGPINIGNPGEFTMLELAENVKEV 286
              + P+N+GNP E T+LE A+ +K +
Sbjct:   317 VSSPVNLGNPEEHTILEFAQLIKNL 341

GO:0050662 "coenzyme binding" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1PU61 UXS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
 Identities = 176/265 (66%), Positives = 214/265 (80%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    73 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 130

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:   131 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 190

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   191 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 250

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM   
Sbjct:   251 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 310

Query:   262 NTGPINIGNPGEFTMLELAENVKEV 286
              + P+N+GNP E T+LE A+ +K +
Sbjct:   311 VSSPVNLGNPEEHTILEFAQLIKNL 335

GO:0005739 "mitochondrion" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|B3KV61 UXS1 "UDP-glucuronate decarboxylase 1, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
 Identities = 176/265 (66%), Positives = 214/265 (80%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    22 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 79

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:    80 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 139

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 199

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM   
Sbjct:   200 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 259

Query:   262 NTGPINIGNPGEFTMLELAENVKEV 286
              + P+N+GNP E T+LE A+ +K +
Sbjct:   260 VSSPVNLGNPEEHTILEFAQLIKNL 284

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q8NBZ7 UXS1 "UDP-glucuronic acid decarboxylase 1" [Homo sapiens (taxid:9606)]

 Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
 Identities = 176/265 (66%), Positives = 214/265 (80%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:   137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM   
Sbjct:   257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316

Query:   262 NTGPINIGNPGEFTMLELAENVKEV 286
              + P+N+GNP E T+LE A+ +K +
Sbjct:   317 VSSPVNLGNPEEHTILEFAQLIKNL 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0033320 "UDP-D-xylose biosynthetic process" evidence=IEA

TIGR_CMR|GSU_1815 GSU_1815 "NAD-dependent epimerase/dehydratase family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
 Identities = 173/252 (68%), Positives = 214/252 (84%)

Query:    33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
             MRILVTGGAGFIGSHL ++L+E + ++V+ +DN+FTGSK N+ + +   RFE+IRHD+ E
Sbjct:     1 MRILVTGGAGFIGSHLCERLLE-QGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIE 59

Query:    93 PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
             P+L+EVD+IY+LACPASP+ Y+YNPVKTIKT+V+GT+NMLGLAKRV ARIL  STSEVYG
Sbjct:    60 PILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYG 119

Query:   153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
             DP +HPQ ESYWGNVNPIG+RSCYDEGKRVAETL+ DYHRQ+G++IRIARIFNTYGPRM 
Sbjct:   120 DPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMA 179

Query:   213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNP 271
               DGRVVSNF+ QA+RGE LTV   G+QTRSFCYV D++DGL+ LME +   GP+N+GNP
Sbjct:   180 EHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVNLGNP 239

Query:   272 GEFTMLELAENV 283
              E  ++E A  +
Sbjct:   240 EETPIIEFARRI 251

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=ISS

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6GMI9	UXS1_DANRE	4, ., 1, ., 1, ., 3, 5	0.6798	0.8484	0.6028	yes	no
Q6DF08	UXS1_XENTR	4, ., 1, ., 1, ., 3, 5	0.6145	0.9360	0.6603	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	297
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	0.0
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	1e-157
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	1e-153
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	7e-67
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-66
cd08946	200	cd08946, SDR_e, extended (e) SDRs	4e-56
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	6e-55
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-53
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	1e-49
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	1e-45
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	4e-43
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	5e-36
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	2e-33
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	3e-33
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	6e-33
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	3e-32
PLN02427	386	PLN02427, PLN02427, UDP-apiose/xylose synthase	1e-31
PRK11908	347	PRK11908, PRK11908, NAD-dependent epimerase/dehydr	2e-30
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	1e-28
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	4e-28
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	7e-28
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	8e-28
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	1e-27
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	8e-26
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	2e-24
PRK10217	355	PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase;	4e-22
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	9e-22
PRK08125	660	PRK08125, PRK08125, bifunctional UDP-glucuronic ac	3e-21
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	5e-21
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	9e-20
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	1e-19
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	4e-19
PRK10084	352	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase;	9e-19
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	3e-17
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	9e-17
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	7e-16
PRK15181	348	PRK15181, PRK15181, Vi polysaccharide biosynthesis	9e-16
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	4e-15
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	4e-15
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-14
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-14
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	9e-14
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	1e-13
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	4e-13
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	7e-13
cd05255	382	cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth	1e-12
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	4e-12
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	4e-12
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	7e-12
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	2e-11
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	4e-11
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	5e-11
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	6e-11
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	3e-10
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	3e-10
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	5e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-09
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	4e-09
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	5e-09
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	6e-09
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	7e-09
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	7e-09
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	8e-09
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	2e-08
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	9e-08
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	5e-07
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	1e-06
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	3e-06
TIGR01472	343	TIGR01472, gmd, GDP-mannose 4,6-dehydratase	3e-06
PRK11150	308	PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi	4e-06
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	6e-06
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	2e-05
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	3e-05
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	4e-05
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	9e-05
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-04
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-04
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	2e-04
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	6e-04
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	8e-04
PLN02572	442	PLN02572, PLN02572, UDP-sulfoquinovose synthase	0.003
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	0.003

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score =  517 bits (1334), Expect = 0.0
 Identities = 190/255 (74%), Positives = 220/255 (86%), Gaps = 2/255 (0%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
            RIL+TGGAGF+GSHL D+L+  + +EVI VDN+FTG K N+   IGHP FE IRHDVTE
Sbjct: 1   KRILITGGAGFLGSHLCDRLL-EDGHEVICVDNFFTGRKRNIEHLIGHPNFEFIRHDVTE 59

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
           PL +EVDQIYHLACPASP+ Y+YNP+KT+KTNV+GTLNMLGLAKRVGAR+LL STSEVYG
Sbjct: 60  PLYLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGARVLLASTSEVYG 119

Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
           DP VHPQ ESYWGNVNPIG RSCYDEGKRVAETL   YHRQHG+++RIARIFNTYGPRM+
Sbjct: 120 DPEVHPQPESYWGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGVDVRIARIFNTYGPRMH 179

Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNP 271
            +DGRVVSNFI QA+RGEP+TV   GTQTRSF YVSD+V+GLIRLM  +   GP+N+GNP
Sbjct: 180 PNDGRVVSNFIVQALRGEPITVYGDGTQTRSFQYVSDLVEGLIRLMNSDYFGGPVNLGNP 239

Query: 272 GEFTMLELAENVKEV 286
            EFT+LELAE VK++
Sbjct: 240 EEFTILELAELVKKL 254

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score =  445 bits (1146), Expect = e-157
 Identities = 192/253 (75%), Positives = 220/253 (86%), Gaps = 1/253 (0%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           +R++VTGGAGF+GSHLVD+LM    + VIVVDN+FTG K+N+     +P FELIRHDV E
Sbjct: 120 LRVVVTGGAGFVGSHLVDRLMARGDS-VIVVDNFFTGRKENVMHHFSNPNFELIRHDVVE 178

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
           P+L+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSEVYG
Sbjct: 179 PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 238

Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
           DPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL  DYHR   +E+RIARIFNTYGPRM 
Sbjct: 239 DPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMC 298

Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPG 272
           IDDGRVVSNF+AQA+R EPLTV   G QTRSF +VSD+V+GL+RLMEGE+ GP N+GNPG
Sbjct: 299 IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPG 358

Query: 273 EFTMLELAENVKE 285
           EFTMLELA+ V+E
Sbjct: 359 EFTMLELAKVVQE 371

Length = 442

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score =  435 bits (1121), Expect = e-153
 Identities = 197/257 (76%), Positives = 222/257 (86%), Gaps = 1/257 (0%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
           +  +RI+VTGGAGF+GSHLVDKL+    +EVIV+DN+FTG K+NL    G+PRFELIRHD
Sbjct: 118 RKRLRIVVTGGAGFVGSHLVDKLI-GRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHD 176

Query: 90  VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
           V EP+L+EVDQIYHLACPASP+ YKYNPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct: 177 VVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSE 236

Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
           VYGDPL HPQ E+YWGNVNPIG RSCYDEGKR AETL  DYHR  G+E+RIARIFNTYGP
Sbjct: 237 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGP 296

Query: 210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIG 269
           RM +DDGRVVSNF+AQ IR +P+TV   G QTRSF YVSD+VDGL+ LMEGE+ GP N+G
Sbjct: 297 RMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEHVGPFNLG 356

Query: 270 NPGEFTMLELAENVKEV 286
           NPGEFTMLELAE VKE 
Sbjct: 357 NPGEFTMLELAEVVKET 373

Length = 436

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score =  210 bits (537), Expect = 7e-67
 Identities = 102/265 (38%), Positives = 147/265 (55%), Gaps = 21/265 (7%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+LVTGGAGFIGSHLV++L+E   +EVIV+DN  TG K+NL +    P  + I  D+   
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERG-HEVIVLDNLSTGKKENLPE--VKPNVKFIEGDIRDD 57

Query: 92  ---EPLLIEVDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
              E     VD ++H A  AS P   + +P+K  + NV+GTLN+L  A++ G  R +  S
Sbjct: 58  ELVEFAFEGVDYVFHQAAQASVPRSIE-DPIKDHEVNVLGTLNLLEAARKAGVKRFVYAS 116

Query: 147 TSEVYGDPLVHPQDESYWGN-VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           +S VYGDP   P+DE +  N ++P  V       K   E     + R +G+     R FN
Sbjct: 117 SSSVYGDPPYLPKDEDHPPNPLSPYAV------SKYAGELYCQVFARLYGLPTVSLRYFN 170

Query: 206 TYGPRMNIDDGR--VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
            YGPR + + G   V+  FI +A++GEP T+   G QTR F YV D+V+  +        
Sbjct: 171 VYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAATAGAG 230

Query: 264 GPI-NIGNPGEFTMLELAENVKEVN 287
           G + NIG     ++ ELAE ++E+ 
Sbjct: 231 GEVYNIGTGKRTSVNELAELIREIL 255

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  209 bits (534), Expect = 2e-66
 Identities = 101/261 (38%), Positives = 136/261 (52%), Gaps = 13/261 (4%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MRILVTGGAGFIGSHLV++L+    ++V  +D    G        +     +L   D+ +
Sbjct: 1   MRILVTGGAGFIGSHLVERLLA-AGHDVRGLDRLRDGLDPL-LSGVEFVVLDLTDRDLVD 58

Query: 93  PLLIEV-DQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVG-ARILLTST-S 148
            L   V D + HLA  +S       +P + +  NV GTLN+L  A+  G  R +  S+ S
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVS 118

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
            VYGDP   P DE   G   P    + Y   K  AE L+  Y R +G+ + I R FN YG
Sbjct: 119 VVYGDPPPLPIDEDL-GPPRP---LNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYG 174

Query: 209 PRMNID-DGRVVSNFIAQAIRGEPL-TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI 266
           P    D    VVS FI Q ++GEP+  +   G+QTR F YV D+ D L+  +E  + G  
Sbjct: 175 PGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGGVF 234

Query: 267 NIGNPG-EFTMLELAENVKEV 286
           NIG+   E T+ ELAE V E 
Sbjct: 235 NIGSGTAEITVRELAEAVAEA 255

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score =  179 bits (457), Expect = 4e-56
 Identities = 82/238 (34%), Positives = 114/238 (47%), Gaps = 41/238 (17%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTGGAGFIGSHLV +L     +EV+V+D                              
Sbjct: 1   ILVTGGAGFIGSHLVRRL-LERGHEVVVIDRL---------------------------- 31

Query: 95  LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD 153
               D + HLA          NP +  +TNV+GTLN+L  A++ G  R +  S++ VYG 
Sbjct: 32  ----DVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASSASVYGS 87

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P   P++E       P+   S Y   K  AE L+  Y   +G+ + I R+ N YGP    
Sbjct: 88  PEGLPEEEETP--PRPL---SPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRP 142

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIG 269
               VV++FI +A+ G+PLTV   G QTR F +V D+V  ++  +E      G  NIG
Sbjct: 143 RLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYNIG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  180 bits (458), Expect = 6e-55
 Identities = 94/274 (34%), Positives = 133/274 (48%), Gaps = 29/274 (10%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
            +LVTG  GFIGSHL ++L+  E +EV  +D Y + +   L     H RF  I  DV + 
Sbjct: 1   NVLVTGADGFIGSHLTERLLR-EGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDA 59

Query: 94  LLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTST 147
             +E      D ++HLA   +  +    P+  ++TNV GTLN+L  A  +   R++ TST
Sbjct: 60  SEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHTST 119

Query: 148 SEVYGDPLVHPQDESYWGNVNPIGV----RSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
           SEVYG     P DE      +P+      RS Y   K+ A+ L + Y R  G+ + I R 
Sbjct: 120 SEVYGTAQDVPIDED-----HPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRP 174

Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE-- 261
           FNTYGPR       V+   I+Q   G+ L     G+ TR F +V D   G I +++    
Sbjct: 175 FNTYGPRQ--SARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFIDILDAIEA 232

Query: 262 --------NTGPINIGNPG-EFTMLELAENVKEV 286
                   +   I+IGNP  E  + EL E V  V
Sbjct: 233 VGEIINNGSGEEISIGNPAVELIVEELGEMVLIV 266

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  174 bits (442), Expect = 2e-53
 Identities = 82/249 (32%), Positives = 115/249 (46%), Gaps = 30/249 (12%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTGG GFIGSHLV +L++        V       +      +   R      D+T+P 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEG----YEVIVLGRRRRSES---LNTGRIRFHEGDLTDPD 53

Query: 95  LIE-------VDQIYHLA----CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RI 142
            +E        D + HLA      AS      +P   I+ NV+GTL +L  A+R G  R 
Sbjct: 54  ALERLLAEVQPDAVIHLAAQSGVGAS----FEDPADFIRANVLGTLRLLEAARRAGVKRF 109

Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           +  S+SEVYGD    P  E       P+G  S Y   K  AE L+  Y R +G+   I R
Sbjct: 110 VFASSSEVYGDVADPPITEDT-----PLGPLSPYAAAKLAAERLVEAYARAYGLRAVILR 164

Query: 203 IFNTYGPR-MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME-G 260
           +FN YGP   +     V+   I + + G+P+ +   GTQ R F YV D+   ++  +E  
Sbjct: 165 LFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHP 224

Query: 261 ENTGPINIG 269
           +     NIG
Sbjct: 225 DGGEIYNIG 233

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score =  166 bits (422), Expect = 1e-49
 Identities = 94/261 (36%), Positives = 131/261 (50%), Gaps = 17/261 (6%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RILVTGGAGFIGSHLVD+L+E E NEV+VVDN  +G ++N+     +  F  ++ D+ + 
Sbjct: 1   RILVTGGAGFIGSHLVDRLLE-EGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDT 59

Query: 94  L----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  + D ++HLA          +P   ++ NV+ T N+L   +  G  RI+  S+S
Sbjct: 60  ADKVAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFASSS 119

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
            VYG+  V P  E Y     PI   S Y   K  AE L+  Y    G +  I R  N  G
Sbjct: 120 TVYGEAKVIPTPEDY--PPLPI---SVYGASKLAAEALISAYAHLFGFQAWIFRFANIVG 174

Query: 209 PRMNIDDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLME--GENTGP 265
           PR       V+ +FI +  R    L V   G Q +S+ YVSD VD ++   E   E    
Sbjct: 175 PRST---HGVIYDFINKLKRNPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEGVNI 231

Query: 266 INIGNPGEFTMLELAENVKEV 286
            N+GN    ++ E+AE V E 
Sbjct: 232 FNLGNDDTISVNEIAEIVIEE 252

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score =  156 bits (396), Expect = 1e-45
 Identities = 87/270 (32%), Positives = 134/270 (49%), Gaps = 27/270 (10%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
           M+ILVTGGAGFIGS+ V  L+    + ++I +D   + G+ +NL      PR+  ++ D+
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPRYRFVKGDI 60

Query: 91  TEPLLI-------EVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
            +  L+       ++D + H A       S I    +P   I+TNV+GT  +L  A++ G
Sbjct: 61  CDAELVDRLFEEEKIDAVIHFAAESHVDRS-I---SDPEPFIRTNVLGTYTLLEAARKYG 116

Query: 140 A-RILLTSTSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
             R +  ST EVYGD        E+    + P    S Y   K  A+ L+  YHR +G+ 
Sbjct: 117 VKRFVHISTDEVYGDLLDDGEFTETS--PLAP---TSPYSASKAAADLLVRAYHRTYGLP 171

Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
           + I R  N YGP    +  +++  FI  A+ G+PL +   G   R + YV D    +  +
Sbjct: 172 VVITRCSNNYGPYQFPE--KLIPLFILNALDGKPLPIYGDGLNVRDWLYVEDHARAIELV 229

Query: 258 MEGENTGPI-NIGNPGEFTMLELAENVKEV 286
           +E    G I NIG   E T LEL + + E+
Sbjct: 230 LEKGRVGEIYNIGGGNELTNLELVKLILEL 259

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score =  149 bits (379), Expect = 4e-43
 Identities = 84/268 (31%), Positives = 114/268 (42%), Gaps = 22/268 (8%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           R LVTG  GFIGSHL ++L   E + V   D                   +L   +    
Sbjct: 2   RALVTGAGGFIGSHLAERLKA-EGHYVRGADWKSPEHMTQPTDDDEFHLVDLREMENCLK 60

Query: 94  LLIEVDQIYHLACPASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY 151
               VD ++HLA     + Y + N    +  N +   NML  A+  G  R L  S++ VY
Sbjct: 61  ATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLFASSACVY 120

Query: 152 GDPLVHPQDESYWGNVN--------PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
                 P+ +     V         P   +  Y   K   E L   Y+  +GIE RI R 
Sbjct: 121 ------PEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIVRF 174

Query: 204 FNTYGPRMNIDDGR-----VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            N YGPR   D GR      +   +A A  G+   +   G QTRSF Y+ D V+GL RLM
Sbjct: 175 HNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEGLRRLM 234

Query: 259 EGENTGPINIGNPGEFTMLELAENVKEV 286
           E +   P+N+G+    +M ELAE V   
Sbjct: 235 ESDFGEPVNLGSDEMVSMNELAEMVLSF 262

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score =  130 bits (329), Expect = 5e-36
 Identities = 89/265 (33%), Positives = 131/265 (49%), Gaps = 23/265 (8%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFT--GSKDNLRKWIGHPRFELIRHDVT 91
           +LVTG  GFIGSHLV+ L+         V+ N F   G  D     +   + E++  D+ 
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEV-KDKIEVVTGDIR 59

Query: 92  EPLLIE-----VDQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVG-ARILL 144
           +P  +       D ++HLA   + I Y Y  P   + TNV GTLN+L  A+ +G  +++ 
Sbjct: 60  DPDSVRKAMKGCDVVFHLAALIA-IPYSYIAPDSYVDTNVTGTLNVLQAARDLGVEKVVH 118

Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           TSTSEVYG     P DE +     P+  +S Y   K  A+ L   ++R     + I R F
Sbjct: 119 TSTSEVYGTAQYVPIDEKH-----PLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRPF 173

Query: 205 NTYGPRMNIDDGR-VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
           NTYGPR +    R V+   I Q   G+        + TR F YV+D V G I + E + T
Sbjct: 174 NTYGPRQS---ARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVRGFIAIAESDKT 230

Query: 264 -GP-INIGNPGEFTMLELAENVKEV 286
            G  INIG+  E ++ +  + + E+
Sbjct: 231 VGEVINIGSNFEISIGDTVKLIAEI 255

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score =  124 bits (314), Expect = 2e-33
 Identities = 81/270 (30%), Positives = 125/270 (46%), Gaps = 25/270 (9%)

Query: 33  MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVD--NYFTGSKDNLRKWIGHPRFELIRHD 89
           M+ILVTGGAGFIGS+ V  ++     + V+ +D   Y  G+ +NL      PR+  ++ D
Sbjct: 1   MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY-AGNLENLADVEDSPRYRFVQGD 59

Query: 90  VTEPLLIE-------VDQIYHLACPAS---PIFYKYNPVKTIKTNVIGTLNMLGLAKR-- 137
           + +  L++        D + H A  +     I     P   I+TNV+GT  +L  A++  
Sbjct: 60  ICDRELVDRLFKEYQPDAVVHFAAESHVDRSI---DGPAPFIQTNVVGTYTLLEAARKYW 116

Query: 138 VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
              R    ST EVYGD      D+  +    P    S Y   K  ++ L+  Y R +G+ 
Sbjct: 117 GKFRFHHISTDEVYGD---LGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLP 173

Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
             I R  N YGP    +  +++   I  A+ G+PL V   G Q R + YV D    +  +
Sbjct: 174 ATITRCSNNYGPYQFPE--KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLV 231

Query: 258 MEGENTGPI-NIGNPGEFTMLELAENVKEV 286
           +     G   NIG   E T LE+ + + E+
Sbjct: 232 LTKGKIGETYNIGGGNERTNLEVVKTICEL 261

Length = 340

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score =  123 bits (311), Expect = 3e-33
 Identities = 85/264 (32%), Positives = 126/264 (47%), Gaps = 18/264 (6%)

Query: 34  RILVTGGAGFIGSHLVDK-LMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
           RILVTGGAGFIGS+ V   L E+   EVIV+D   + G+ +NL     +PR+  ++ D+ 
Sbjct: 1   RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIG 60

Query: 92  EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARI 142
           +  L+       + D + H A  +        P   I+TNV+GT  +L   ++     R 
Sbjct: 61  DRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRF 120

Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
              ST EVYGD     +    +    P+   S Y   K  ++ L+  YHR +G+   I R
Sbjct: 121 HHISTDEVYGD----LEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITR 176

Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN 262
             N YGP    +  +++   I  A+ G+PL V   G Q R + YV D    +  ++E   
Sbjct: 177 CSNNYGPYQFPE--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR 234

Query: 263 TGPI-NIGNPGEFTMLELAENVKE 285
            G   NIG   E T LE+ E + E
Sbjct: 235 VGETYNIGGGNERTNLEVVETILE 258

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score =  122 bits (308), Expect = 6e-33
 Identities = 77/246 (31%), Positives = 112/246 (45%), Gaps = 23/246 (9%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELI------R 87
           R+L+ GG GFIGSHLVD L+E     V V D         L         + I      R
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQ-VRVFDRSI--PPYELPLG----GVDYIKGDYENR 53

Query: 88  HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL--AKRVGARILLT 145
            D+    L+ +D + HLA   +P     NP+  I+TNV  T+ +L    A  +G  I  +
Sbjct: 54  ADLES-ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           S   VYG P   P  ES      PI   S Y   K   E  +  Y   +G++  + RI N
Sbjct: 113 SGGTVYGVPEQLPISESD--PTLPI---SSYGISKLAIEKYLRLYQYLYGLDYTVLRISN 167

Query: 206 TYGPRMNIDDGR-VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
            YGP    D  + V+   + + +RGEP+ +   G   R + Y+ D+V+ L+ L+  +   
Sbjct: 168 PYGPGQRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLE 227

Query: 265 PI-NIG 269
            + NIG
Sbjct: 228 EVFNIG 233

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score =  121 bits (306), Expect = 3e-32
 Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 39/272 (14%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKWIGHPRFELIRH 88
           MR+L+TGGAGFIGS+L    ++    EVI  DN       G+   L+          +  
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQG-WEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHG 59

Query: 89  DV-----TEPLLIEVDQIYHLAC-PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--A 140
           D+      E L  ++D I H A  P+       +P    +TN +GTLN+L  A++    A
Sbjct: 60  DIRNRNDLEDLFEDIDLIIHTAAQPSVTTSAS-SPRLDFETNALGTLNVLEAARQHAPNA 118

Query: 141 RILLTSTSEVYGD-----PLVHPQDESYW----GNVNPIGV---------RSCYDEGKRV 182
             + TST++VYGD     PL   + E+ +       +P G+          S Y   K  
Sbjct: 119 PFIFTSTNKVYGDLPNYLPLE--ELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGA 176

Query: 183 AETLMFDYHRQHGIEIRIARIFNTYGPR-MNIDDGRVVSNFIAQAIRGEPLTVQAPG-TQ 240
           A+  + +Y R  G++  + R     GPR    +D   V+ F+  A+ G+PLT+   G  Q
Sbjct: 177 ADQYVQEYGRIFGLKTVVFRCGCLTGPRQFGTEDQGWVAYFLKCAVTGKPLTIFGYGGKQ 236

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGP---INIG 269
            R   + +D+V+  +R  +  +       NIG
Sbjct: 237 VRDVLHSADLVNLYLRQFQNPDRRKGEVFNIG 268

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase

 Score =  120 bits (303), Expect = 1e-31
 Identities = 91/291 (31%), Positives = 139/291 (47%), Gaps = 37/291 (12%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK----WIGHPRFEL--I 86
           + I + G  GFIGSHL +KLM    ++V+ +D Y    K  L      W G  +F    I
Sbjct: 15  LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINI 74

Query: 87  RHDVTEPLLIEV-DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
           +HD     LI++ D   +LA   +P  Y   P+ TI +N I  L ++        R++  
Sbjct: 75  KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 134

Query: 146 STSEVYGD------PLVHP--QDESYW---GNVNPI------GVRSCYDEGKRVAETLMF 188
           ST EVYG       P  HP  QD +++    + +P         R  Y   K++ E L++
Sbjct: 135 STCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIY 194

Query: 189 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAIRGEPLTVQAPGT 239
               ++G+E  I R FN  GPRM+   G         RV++ F    +R EPL +   G 
Sbjct: 195 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQ 254

Query: 240 QTRSFCYVSDMVDGLIRLME--GENTGPI-NIGNP-GEFTMLELAENVKEV 286
             R+F Y+ D ++ ++ ++E      G I N+GNP  E T+ +LAE + EV
Sbjct: 255 SQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEV 305

Length = 386

>gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional

 Score =  116 bits (293), Expect = 2e-30
 Identities = 79/273 (28%), Positives = 132/273 (48%), Gaps = 33/273 (12%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
            ++L+ G  GFIG HL  +++E    EV  +D       D L   + HPR      D+T 
Sbjct: 2   KKVLILGVNGFIGHHLSKRILETTDWEVYGMDM----QTDRLGDLVNHPRMHFFEGDITI 57

Query: 92  -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
                E  + + D I  L   A+P  Y   P++  + +    L ++  A + G  ++  S
Sbjct: 58  NKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117

Query: 147 TSEVYG---DPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
           TSEVYG   D    P + S   +G +N    R  Y   K++ + +++ Y  + G+   + 
Sbjct: 118 TSEVYGMCPDEEFDP-EASPLVYGPINK--PRWIYACSKQLMDRVIWAYGMEEGLNFTLF 174

Query: 202 RIFNTYGPRMNIDD--------GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG 253
           R FN  GP +  D          RVV+ F+   +RGEP+++   G+Q R+F  + D +D 
Sbjct: 175 RPFNWIGPGL--DSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDA 232

Query: 254 LIRLMEGEN---TGPI-NIGNPG-EFTMLELAE 281
           L++++E ++   +G I NIGNP    ++ ELA 
Sbjct: 233 LMKIIENKDGVASGKIYNIGNPKNNHSVRELAN 265

Length = 347

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score =  111 bits (281), Expect = 1e-28
 Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 45/285 (15%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           ++LVTGGAG+IGSH V +L+E    +V+V+DN   G ++ L   I   R E    D+ + 
Sbjct: 1   KVLVTGGAGYIGSHTVVELLE-AGYDVVVLDNLSNGHREAL-PRIEKIRIEFYEGDIRDR 58

Query: 94  LLIE-------VDQIYHLACPASPIFYKY------NPVKTIKTNVIGTLNMLGLAKRVGA 140
             ++       +D + H A        K        P+K    NV+GTLN+L   +  G 
Sbjct: 59  AALDKVFAEHKIDAVIHFAA------LKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGV 112

Query: 141 -RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
              + +S++ VYG+P   P  E       P+   + Y   K + E ++ D  +  G+   
Sbjct: 113 KNFVFSSSAAVYGEPETVPITEEA-----PLNPTNPYGRTKLMVEQILRDLAKAPGLNYV 167

Query: 200 IARIFNTYGPRMNID---DGRVVSN---FIAQAIRG--EPLTV------QAPGTQTRSFC 245
           I R FN  G   +     D ++ +N   ++ Q   G  E L +         GT  R + 
Sbjct: 168 ILRYFNPAGAHPSGLIGEDPQIPNNLIPYVLQVALGRREKLAIFGDDYPTPDGTCVRDYI 227

Query: 246 YVSDMVDG----LIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           +V D+ D     L +L  G  +   N+G    +++LE+ E  ++V
Sbjct: 228 HVVDLADAHVLALEKLENGGGSEIYNLGTGRGYSVLEVVEAFEKV 272

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score =  109 bits (276), Expect = 4e-28
 Identities = 70/267 (26%), Positives = 104/267 (38%), Gaps = 31/267 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-----PRFELIRH 88
           R L+TG  G  GS+L + L+E    EV  +      S       I H      R  L   
Sbjct: 1   RALITGITGQDGSYLAEFLLEK-GYEVHGIV---RRSSSFNTDRIDHLYINKDRITLHYG 56

Query: 89  DVTEPL-LIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK--RVG 139
           D+T+   L         D+IYHLA  +       +P  T + N +GTLN+L   +   + 
Sbjct: 57  DLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLD 116

Query: 140 ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
           AR    S+SE YG     PQ E+      P   RS Y   K  A+ +  +Y   +G+   
Sbjct: 117 ARFYQASSSEEYGKVQELPQSET-----TPFRPRSPYAVSKLYADWITRNYREAYGLFAV 171

Query: 200 IARIFNTYGPRMNIDDG-RVVSNFIAQAIRG--EPLTVQAPG--TQTRSFCYVSDMVDGL 254
             R+FN  GPR       R ++  +A+   G    L +   G     R +    D V+  
Sbjct: 172 NGRLFNHEGPRRGETFVTRKITRQVARIKAGLQPVLKL---GNLDAKRDWGDARDYVEAY 228

Query: 255 IRLMEGENTGPINIGNPGEFTMLELAE 281
             L++        I      ++ E  E
Sbjct: 229 WLLLQQGEPDDYVIATGETHSVREFVE 255

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score =  109 bits (275), Expect = 7e-28
 Identities = 82/296 (27%), Positives = 133/296 (44%), Gaps = 50/296 (16%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGS--KDNLRKWIGHPRFELIR 87
           M+ILVTG AGFIG H+  +L+E   +EV+ +DN   Y+     +  L        F+ ++
Sbjct: 1   MKILVTGAAGFIGFHVAKRLLE-RGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFVK 59

Query: 88  HDVTEPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 140
            D+ +   +       E D + HLA  A   +   NP   + +N++G LN+L L +  G 
Sbjct: 60  GDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHFGV 119

Query: 141 R-ILLTSTSEVYGDPLVHPQDESYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
           + ++  S+S VYG     P  E     V+ PI   S Y   K+  E +   Y   +GI  
Sbjct: 120 KHLVYASSSSVYGLNTKMPFSED--DRVDHPI---SLYAATKKANELMAHTYSHLYGIPT 174

Query: 199 RIARIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
              R F  YGP      GR    +  F    + G+P+ V   G  +R F Y+ D+V+G++
Sbjct: 175 TGLRFFTVYGPW-----GRPDMALFLFTKAILEGKPIDVFNDGNMSRDFTYIDDIVEGVV 229

Query: 256 RLM----------EGENTGP---------INIGNPGEFTMLELAENVKEVNFYLGR 292
           R +          + E   P          NIGN    + ++L + ++ +   LG+
Sbjct: 230 RALDTPAKPNPNWDAEAPDPSTSSAPYRVYNIGNN---SPVKLMDFIEALEKALGK 282

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score =  109 bits (274), Expect = 8e-28
 Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 35/281 (12%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPR-FELIRHDVTE 92
           +ILVTGGAG+IGSH V +L+E+   EV+++DN   GS++ L            +  D+ +
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGH-EVVILDNLSNGSREAL-PRGERITPVTFVEGDLRD 58

Query: 93  PLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
             L+       ++D + H A   +       P+K  + NV+GTLN+L   ++ G  + + 
Sbjct: 59  RELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIF 118

Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR-QHGIEIRIARI 203
           +S++ VYG+P   P  E       P+G  + Y   K ++E ++ D  +        I R 
Sbjct: 119 SSSAAVYGEPSSIPISEDS-----PLGPINPYGRSKLMSEQILRDLQKADPDWSYVILRY 173

Query: 204 FNTYGPRMNIDDGRVVSN------FIAQAIRG--EPLTV------QAPGTQTRSFCYVSD 249
           FN  G   + D G           +  Q   G  + LT+         GT  R + +V D
Sbjct: 174 FNVAGAHPSGDIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMD 233

Query: 250 MVDGLIRLME----GENTGPINIGNPGEFTMLELAENVKEV 286
           + D  +  +E    G  +   N+G    F++LE+ E  K+V
Sbjct: 234 LADAHLAALEYLLNGGGSHVYNLGYGQGFSVLEVIEAFKKV 274

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score =  108 bits (273), Expect = 1e-27
 Identities = 82/295 (27%), Positives = 128/295 (43%), Gaps = 64/295 (21%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
           M++LVTGGAG+IGSH V +L++   +EV+V+DN   G K  L K       +    D+  
Sbjct: 1   MKVLVTGGAGYIGSHTVRQLLKT-GHEVVVLDNLSNGHKIALLKLQF----KFYEGDLLD 55

Query: 92  EPLLIEV------DQIYHLACPASPIFYKY------NPVKTIKTNVIGTLNMLGLAKRVG 139
             LL  V      D + H A                NP+K    NV+GTLN++    + G
Sbjct: 56  RALLTAVFEENKIDAVVHFAA------SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG 109

Query: 140 AR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
            +  + +ST+ VYG+P   P  E+      P+   + Y   K ++E ++ D  + +  ++
Sbjct: 110 VKKFIFSSTAAVYGEPTTSPISETS-----PLAPINPYGRSKLMSEEILRDAAKANPFKV 164

Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE----PLTVQAP----------------- 237
            I R FN  G      DG      + Q   G     P+  +A                  
Sbjct: 165 VILRYFNVAGACP---DGT-----LGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTK 216

Query: 238 -GTQTRSFCYVSDMVDG----LIRLMEGENTGPINIGNPGEFTMLELAENVKEVN 287
            GT  R + +V D+ D     L  L EG +    N+G+   F++LE+ E  K+V 
Sbjct: 217 DGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVT 271

Length = 329

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score =  103 bits (260), Expect = 8e-26
 Identities = 82/275 (29%), Positives = 120/275 (43%), Gaps = 38/275 (13%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRK-----WIGHPRF-ELIR 87
           I+VTGGAGFIGS+LV  L E    +++VVDN   G K  NL       +I    F + +R
Sbjct: 2   IIVTGGAGFIGSNLVKALNERGITDILVVDNLSNGEKFKNLVGLKIADYIDKDDFKDWVR 61

Query: 88  HDVTEPLLIEVDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
               E   IE   I+H  AC  +      +    +  N   T  +L        R +  S
Sbjct: 62  KG-DENFKIEA--IFHQGACSDTTET---DGKYMMDNNYQYTKELLHYCLEKKIRFIYAS 115

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD-YHRQHGIE--IRIA-- 201
           ++ VYG+  +   ++    N+ P+ V   Y   K     L+FD + R+HG E   ++   
Sbjct: 116 SAAVYGNGSLGFAEDIETPNLRPLNV---YGYSK-----LLFDQWARRHGKEVLSQVVGL 167

Query: 202 RIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTV------QAPGTQTRSFCYVSDMVD 252
           R FN YGPR     GR   VV +   Q   GE + +       A G Q R F YV D+V 
Sbjct: 168 RYFNVYGPREY-HKGRMASVVFHLFNQIKAGEKVKLFKSSDGYADGEQLRDFVYVKDVVK 226

Query: 253 GLIRLME-GENTGPINIGNPGEFTMLELAENVKEV 286
             +  +E    +G  N+G     +  +LA    + 
Sbjct: 227 VNLFFLENPSVSGIFNVGTGRARSFNDLASATFKA 261

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 99.2 bits (248), Expect = 2e-24
 Identities = 72/274 (26%), Positives = 114/274 (41%), Gaps = 31/274 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHPRFELIRHDVTE 92
           +ILVTG  G +GS +V  L       V+     F  SK+ +L              +   
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENVV-----FRTSKELDLTDQ-----------EAVR 44

Query: 93  PLLIEV--DQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVGARILLT-STS 148
               +   D + HLA     I      P   ++ N++   N++  A R G + L+   +S
Sbjct: 45  AFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFLGSS 104

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF-NTY 207
            +Y D    P DES      P      Y   KR    L   Y +Q+G +  I+ +  N Y
Sbjct: 105 CIYPDLAPQPIDESDLLTGPPEPTNEGYAIAKRAGLKLCEAYRKQYGCDY-ISVMPTNLY 163

Query: 208 GPRMNID--DGRVVSNFIAQAIR-----GEPLTVQAPGTQTRSFCYVSDMVDGLIRLME- 259
           GP  N D  +  V+   I +        G+ +TV   GT  R F Y  D+   ++ L+E 
Sbjct: 164 GPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLYSDDLARAIVFLLEN 223

Query: 260 GENTGPINIGNPGEFTMLELAENVKEVNFYLGRL 293
            +    +N+G+  E ++ ELAE + EV  + G +
Sbjct: 224 YDEPIIVNVGSGVEISIRELAEAIAEVVGFKGEI 257

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional

 Score = 94.3 bits (234), Expect = 4e-22
 Identities = 77/269 (28%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
           +IL+TGGAGFIGS LV  ++    + V+VVD   + G+  +L       RF   + D+ +
Sbjct: 3   KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62

Query: 93  PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA---------- 135
              +         D + HLA  +        P   I+TN++GT  +L  A          
Sbjct: 63  RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122

Query: 136 KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
           K+   R    ST EVYGD  +H  D+ ++    P    S Y   K  ++ L+  + R +G
Sbjct: 123 KKSAFRFHHISTDEVYGD--LHSTDD-FFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179

Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
           +   I    N YGP    +  +++   I  A+ G+PL V   G Q R + YV D    L 
Sbjct: 180 LPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY 237

Query: 256 RLMEGENTGPI-NIGNPGEFTMLELAENV 283
            +      G   NIG   E   L++ E +
Sbjct: 238 CVATTGKVGETYNIGGHNERKNLDVVETI 266

Length = 355

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score = 94.8 bits (236), Expect = 9e-22
 Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 26/266 (9%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKN-EVIVVD--NYFTGSKDNLRKWIGHPRFELIRHDVT 91
           IL+TG AGFI SH+ ++L+ N  + +++V+D  +Y +  K NL      P F+ ++ D+ 
Sbjct: 9   ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK-NLNPSKSSPNFKFVKGDIA 67

Query: 92  EP-----LLI--EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RI 142
                  LLI   +D I H A          N  +  K N+ GT  +L   K  G   R 
Sbjct: 68  SADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127

Query: 143 LLTSTSEVYG----DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
           +  ST EVYG    D  V   + S     NP      Y   K  AE L+  Y R +G+ +
Sbjct: 128 IHVSTDEVYGETDEDADVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPV 181

Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRL 257
              R  N YGP  N    +++  FI  A++G+PL +   G+  RS+ Y  D+ +   + L
Sbjct: 182 ITTRGNNVYGP--NQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 239

Query: 258 MEGENTGPINIGNPGEFTMLELAENV 283
            +GE     NIG   E  ++++A+++
Sbjct: 240 HKGEVGHVYNIGTKKERRVIDVAKDI 265

Length = 668

>gnl|CDD|236156 PRK08125, PRK08125, bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

 Score = 93.5 bits (233), Expect = 3e-21
 Identities = 84/271 (30%), Positives = 138/271 (50%), Gaps = 31/271 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+ ++  EV  +D    GS D + +++GHPRF  +  D++  
Sbjct: 317 RVLILGVNGFIGNHLTERLLRDDNYEVYGLD---IGS-DAISRFLGHPRFHFVEGDISIH 372

Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPST 432

Query: 148 SEVYG---DPLVHPQDESYWGN--VNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
           SEVYG   D     +D S   N  V PI   R  Y   K++ + +++ Y  + G+   + 
Sbjct: 433 SEVYGMCTDK-YFDEDTS---NLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLF 488

Query: 202 RIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
           R FN  GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L 
Sbjct: 489 RPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF 548

Query: 256 RLMEGEN---TGPI-NIGNP-GEFTMLELAE 281
           R++E ++    G I NIGNP  E ++ ELAE
Sbjct: 549 RIIENKDNRCDGQIINIGNPDNEASIRELAE 579

Length = 660

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 91.4 bits (227), Expect = 5e-21
 Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 21/265 (7%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD---NYFTGSKDNLRKWIGHPRFELI 86
              +RI +TG  GFI SH+  +L   E + +I  D   N          ++      +L 
Sbjct: 19  SEKLRICITGAGGFIASHIARRLKA-EGHYIIASDWKKNEHMSEDMFCHEFH---LVDLR 74

Query: 87  RHDVTEPLLIEVDQIYHLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
             +    +   VD +++LA     + F + N    +  N + + NML  A+  G  R   
Sbjct: 75  VMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFY 134

Query: 145 TSTSEVYG-----DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
            S++ +Y      +  V  ++   W    P   +  Y   K   E L   Y +  GIE R
Sbjct: 135 ASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLATEELCKHYTKDFGIECR 190

Query: 200 IARIFNTYGPRMNIDDGR--VVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIR 256
           I R  N YGP      GR    + F  +A+   +   +   G QTRSF ++ + V+G++R
Sbjct: 191 IGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLR 250

Query: 257 LMEGENTGPINIGNPGEFTMLELAE 281
           L + +   P+NIG+    +M E+AE
Sbjct: 251 LTKSDFREPVNIGSDEMVSMNEMAE 275

Length = 370

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 86.5 bits (215), Expect = 9e-20
 Identities = 77/274 (28%), Positives = 112/274 (40%), Gaps = 50/274 (18%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS---KDNLRKWIGHPRFELIR 87
               ILVTGGAG IGS LV ++++    ++IV D            LR    H +   I 
Sbjct: 1   KGKTILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFII 60

Query: 88  HDVTEPLLI-------EVDQIYHLACPASPIFYK------YNPVKTIKTNVIGTLNMLGL 134
            DV +   +         D ++H A        K       NP + IKTNV+GT N++  
Sbjct: 61  GDVRDKERLRRAFKERGPDIVFHAAA------LKHVPSMEDNPEEAIKTNVLGTKNVIDA 114

Query: 135 AKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
           A   G  + +  ST            D++    VNP+ V       KRVAE L+   +  
Sbjct: 115 AIENGVEKFVCIST------------DKA----VNPVNV---MGATKRVAEKLLLAKNEY 155

Query: 194 HG-IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD 252
               +    R  N  G R     G V+  F  Q  +G PLTV  P   TR F  + + VD
Sbjct: 156 SSSTKFSTVRFGNVLGSR-----GSVLPLFKKQIKKGGPLTVTDPDM-TRFFMTIPEAVD 209

Query: 253 GLIRLME-GENTGPINIGNPGEFTMLELAENVKE 285
            +++    G+  G   +       +L+LAE + E
Sbjct: 210 LVLQACILGDGGGIFLLDMGPPVKILDLAEALIE 243

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 86.6 bits (215), Expect = 1e-19
 Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 42/259 (16%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEP 93
           I+VTGGAGFIGS+LV  L E    +++VVDN   G K  NL          +I   + + 
Sbjct: 1   IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLAD-------LVIADYIDKE 53

Query: 94  LLIE---------VDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
             ++         ++ I+H  AC  +    + +    ++ N   +  +L      G   +
Sbjct: 54  DFLDRLEKGAFGKIEAIFHQGACSDT---TETDGEYMMENNYQYSKRLLDWCAEKGIPFI 110

Query: 144 LTSTSEVYGD-PLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             S++  YGD      +       +N  G  +  +D+   V   ++ +      + +   
Sbjct: 111 YASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQ--YVRRRVLPEALSAQVVGL--- 165

Query: 202 RIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTVQ--------APGTQTRSFCYVSDM 250
           R FN YGPR     G+   V  +   Q   G    V+          G Q R F YV D+
Sbjct: 166 RYFNVYGPREY-HKGKMASVAFHLFNQIKAGG--NVKLFKSSEGFKDGEQLRDFVYVKDV 222

Query: 251 VDGLIRLMEGENTGPINIG 269
           VD  + L+E   +G  N+G
Sbjct: 223 VDVNLWLLENGVSGIFNLG 241

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 85.0 bits (211), Expect = 4e-19
 Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 46/270 (17%)

Query: 35  ILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           ILVTG  GF+GS+LV  L+    +   +V      GS   L         E++  D+T+ 
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRS----GSDAVLLD---GLPVEVVEGDLTDA 53

Query: 94  LLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
             +       D+++HLA   S  + K    +  +TNV GT N+L  A   G  R++ TS+
Sbjct: 54  ASLAAAMKGCDRVFHLAAFTSL-WAKDRK-ELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111

Query: 148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI---ARIF 204
               G P     DE+     N     + Y   K +AE  + +   + G+++ I   + +F
Sbjct: 112 IAALGGPPDGRIDET--TPWNERPFPNDYYRSKLLAELEVLEAAAE-GLDVVIVNPSAVF 168

Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
                      G  V +++   +   P     PG    SF  V D+ +G I  ME     
Sbjct: 169 GPGDEGPTS-TGLDVLDYLNGKLPAYP-----PGGT--SFVDVRDVAEGHIAAMEK---- 216

Query: 265 PINIGNPGE--------FTMLELAENVKEV 286
               G  GE         +  +L E + E+
Sbjct: 217 ----GRRGERYILGGENLSFKQLFETLAEI 242

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional

 Score = 84.8 bits (210), Expect = 9e-19
 Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 32/278 (11%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
           M+ILVTGGAGFIGS +V  ++ N ++ V+ VD   + G+ ++L       R+     D+ 
Sbjct: 1   MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60

Query: 92  EPLLIEVDQIY---------HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA------- 135
           +    E+D+I+         HLA  +        P   I+TN++GT  +L  A       
Sbjct: 61  D--RAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSAL 118

Query: 136 ---KRVGARILLTSTSEVYGDPLVHPQDES------YWGNVNPIGVRSCYDEGKRVAETL 186
              K+   R    ST EVYGD L HP +         +         S Y   K  ++ L
Sbjct: 119 DEDKKNAFRFHHISTDEVYGD-LPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHL 177

Query: 187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY 246
           +  + R +G+   +    N YGP    +  +++   I  A+ G+PL +   G Q R + Y
Sbjct: 178 VRAWLRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLY 235

Query: 247 VSDMVDGLIRLM-EGENTGPINIGNPGEFTMLELAENV 283
           V D    L +++ EG+     NIG   E   L++   +
Sbjct: 236 VEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTI 273

Length = 352

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 75/298 (25%), Positives = 115/298 (38%), Gaps = 65/298 (21%)

Query: 15  KPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN--------- 65
           +PP                 +LVTGG G IGS L  ++++    E+I+            
Sbjct: 234 RPPVALDTELIGAMLT-GKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLID 292

Query: 66  -YFTGSKDNLRKW--IGHPR-FELIRHDVTEPLLIEVDQIYHLACPASPIFYK------Y 115
                    L+    IG  R  + +   +      +VD ++H A        K      Y
Sbjct: 293 MELREKFPELKLRFYIGDVRDRDRVERAMEG---HKVDIVFHAAA------LKHVPLVEY 343

Query: 116 NPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS 174
           NP + IKTNV+GT N+   A + G  + +L ST +                 VNP  V  
Sbjct: 344 NPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA----------------VNPTNV-- 385

Query: 175 CYDEGKRVAETLMFDYHRQHGIE---IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP 231
                KR+AE L    +R          + R  N  G R     G V+  F  Q   G P
Sbjct: 386 -MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAEGGP 439

Query: 232 LTVQAPGTQTRSFCYVSDMVDGLIR---LMEGENTGPINIGNPGE-FTMLELAENVKE 285
           LTV  P   TR F  + + V  +++   + +G   G I + + GE   +++LA+ + E
Sbjct: 440 LTVTDP-DMTRFFMTIPEAVQLVLQAGAIAKG---GEIFVLDMGEPVKIIDLAKAMIE 493

Length = 588

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 78.7 bits (194), Expect = 9e-17
 Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 51/273 (18%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M++L+TGGAG IGSHL++ L+E   ++V+V+DN+ TG +++L     HP   ++   + +
Sbjct: 1   MKVLITGGAGQIGSHLIEHLLER-GHQVVVIDNFATGRREHLPD---HPNLTVVEGSIAD 56

Query: 93  PLLIEV-------DQIYHLACPASPIFYKYNP---VKTIKTNVIGTLNMLGLAKRVGA-R 141
             L++        D + H A  A+   YK +P    +   TNV+G  N++  AK+ G  R
Sbjct: 57  KALVDKLFGDFKPDAVVHTA--AA---YK-DPDDWYEDTLTNVVGGANVVQAAKKAGVKR 110

Query: 142 ILLTSTSEVYGDP-------LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
           ++   T+  YG         L HP          P G  S Y   K   E     Y    
Sbjct: 111 LIYFQTALCYGLKPMQQPIRLDHP--------RAPPG--SSYAISKTAGE----YYLELS 156

Query: 195 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT-RSFCYVSDMVDG 253
           G++    R+ N  GPR  I     +  F  +   G+   V    T T R F +V D+   
Sbjct: 157 GVDFVTFRLANVTGPRNVIGP---LPTFYQRLKAGKKCFV----TDTRRDFVFVKDLARV 209

Query: 254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKE 285
           + + ++G    G  +  +  + ++ EL + V E
Sbjct: 210 VDKALDGIRGHGAYHFSSGEDVSIKELFDAVVE 242

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 75.1 bits (185), Expect = 7e-16
 Identities = 64/241 (26%), Positives = 97/241 (40%), Gaps = 54/241 (22%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M+IL+TG  GFIG +L+ +L E + +++   D                   EL      +
Sbjct: 1   MKILITGAKGFIGKNLIARLKEQKDDDIFFYD-------------RESDESEL------D 41

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILLTSTSEV 150
             L   D I+HLA    P     +  +    NV  T  +L    R G +  ILL+S+ + 
Sbjct: 42  DFLQGADFIFHLAGVNRP----KDEAEFESGNVGLTERLLDALTRNGKKPPILLSSSIQA 97

Query: 151 YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG-- 208
             D              NP      Y + K  AE L+ +Y R+ G  + I R+ N +G  
Sbjct: 98  ALD--------------NP------YGKSKLAAEELLQEYARETGAPVYIYRLPNVFGKW 137

Query: 209 --PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI 266
             P  N      V+ F     R  P+ +  P     +  Y+ D+VD LI+L+EG  T   
Sbjct: 138 CRPNYN----SAVATFCYNIARDLPIQINDPAA-ELTLVYIDDVVDELIQLLEGAPTYSG 192

Query: 267 N 267
            
Sbjct: 193 G 193

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional

 Score = 76.3 bits (187), Expect = 9e-16
 Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 26/243 (10%)

Query: 26  SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RK 76
           +K   +  R L+TG AGFIGS L+++L+   +  VI +DN+ TG + NL          +
Sbjct: 9   TKLVLAPKRWLITGVAGFIGSGLLEELLFLNQT-VIGLDNFSTGYQHNLDDVRTSVSEEQ 67

Query: 77  WIGHPRFELIRHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM 131
           W    RF  I+ D+      +     VD + H A   S      +P+ T   N+ G LNM
Sbjct: 68  W---SRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNM 124

Query: 132 LGLAKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
           L  A+    +     ++S  YGD    P+ E   G   P+   S Y   K V E     +
Sbjct: 125 LTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGR--PL---SPYAVTKYVNELYADVF 179

Query: 191 HRQHGIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS 248
            R +       R FN +G R N +     V+  +I   ++ EP+ +   G+ +R FCY+ 
Sbjct: 180 ARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIE 239

Query: 249 DMV 251
           +++
Sbjct: 240 NVI 242

Length = 348

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 74.3 bits (183), Expect = 4e-15
 Identities = 83/292 (28%), Positives = 122/292 (41%), Gaps = 50/292 (17%)

Query: 28  FFQSNMRILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYF-TGSKDNL-RKWIG 79
           F+Q   R+LVTG  GF GS L   L E          +     N F   + DN      G
Sbjct: 1   FWQ-GKRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNKISSTRG 59

Query: 80  HPR-FELIRHDVTEPLLIEVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLA 135
             R    +R  + E    E + ++HLA  A P+    YK +PV+T +TNV+GT+N+L   
Sbjct: 60  DIRDLNALREAIRE---YEPEIVFHLA--AQPLVRLSYK-DPVETFETNVMGTVNLLEAI 113

Query: 136 KRVG-ARILLTSTSE-VYGDPLVHPQDESYWGNV--NPIGVRSCYDEGKRVAETLMFDYH 191
           +  G  + ++  TS+  Y +       E  WG    +P+G    Y   K  AE ++  Y 
Sbjct: 114 RETGSVKAVVNVTSDKCYEN------KEWGWGYRENDPLGGHDPYSSSKGCAELIISSYR 167

Query: 192 R---------QHGIEIRIARIFNTY-GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT 241
                     +HGI I  AR  N   G     D  R+V + I     GE + ++ P    
Sbjct: 168 NSFFNPENYGKHGIAIASARAGNVIGGGDWAED--RIVPDCIRAFEAGERVIIRNPNA-I 224

Query: 242 RSFCYVSDMVDGLIRLME------GENTGPINIGNPGE--FTMLELAENVKE 285
           R + +V + + G + L E       E     N G   E   T+LEL E +  
Sbjct: 225 RPWQHVLEPLSGYLLLAEKLYERGEEYAEAWNFGPDDEDAVTVLELVEAMAR 276

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 73.3 bits (181), Expect = 4e-15
 Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 62/277 (22%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKWIGHPRFELIRHDVT 91
           +LVTGG G IGS L  ++++    ++I+         +    LR+    P+      DV 
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQELRQEYNDPKLRFFIGDVR 60

Query: 92  EPLLIE-------VDQIYHLACPASPIFYK------YNPVKTIKTNVIGTLNMLGLAKRV 138
           +   +E       VD ++H A        K      YNP++ IKTNV+GT N+   A   
Sbjct: 61  DRERLERAMEQHGVDTVFHAAA------LKHVPLVEYNPMEAIKTNVLGTENVAEAAIEN 114

Query: 139 GA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF---DYHRQH 194
           G  + +L ST            D++    VNP  V       KR+AE L           
Sbjct: 115 GVEKFVLIST------------DKA----VNPTNV---MGATKRLAEKLFQAANRESGSG 155

Query: 195 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL 254
                + R  N  G R     G V+  F  Q   G P+TV  P   TR F  + + V  +
Sbjct: 156 KTRFSVVRFGNVLGSR-----GSVIPLFKKQIANGGPVTVTHP-DMTRFFMTIPEAVQLV 209

Query: 255 IR---LMEGENTGPI---NIGNPGEFTMLELAENVKE 285
           ++   + +G   G I   ++G P    +++LA+ +  
Sbjct: 210 LQAGAMGKG---GEIFVLDMGPP--VKIVDLAKAMIG 241

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 59/275 (21%), Positives = 88/275 (32%), Gaps = 61/275 (22%)

Query: 33  MRILVTGGAGFIGSHLVDKLMEN-----------------EKNEVIVVDNYFTGSKDNLR 75
           M+IL+ GG  FIG  LV++L+                   E  E IV D      +D L 
Sbjct: 1   MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDLPEGVEHIVGDRN---DRDALE 57

Query: 76  KWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA 135
           + +G   F+++           VD I             Y P +            L   
Sbjct: 58  ELLGGEDFDVV-----------VDTI------------AYTPRQV--------ERALDAF 86

Query: 136 KRVGARILLTSTSEVYGDPLVHPQDESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQ 193
           K    + +  S++ VY  P     + +         +     Y  GKR AE ++ +    
Sbjct: 87  KGRVKQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAA-- 144

Query: 194 HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG 253
                 I R    YGP          + F  +  RG P+ V   G     F +V D+   
Sbjct: 145 -AFPYTIVRPPYIYGPGDYTGRL---AYFFDRLARGRPILVPGDGHSLVQFIHVKDLARA 200

Query: 254 LIRLMEGE--NTGPINIGNPGEFTMLELAENVKEV 286
           L+          G  NI      T  EL E   + 
Sbjct: 201 LLGAAGNPKAIGGIFNITGDEAVTWDELLEACAKA 235

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 71.3 bits (175), Expect = 3e-14
 Identities = 62/232 (26%), Positives = 94/232 (40%), Gaps = 26/232 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
            +LVTGG+GF G  LV +L+E     V   D    G    L  W  HP  E ++ D+T+ 
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEA--LSAW-QHPNIEFLKGDITDR 57

Query: 94  LLIE-----VDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 146
             +E      D ++H A           P     + NV GT N+L   +R G +  + TS
Sbjct: 58  NDVEQALSGADCVFHTAAIVPL----AGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTS 113

Query: 147 TSEV-YGDPLVHPQDESYWGNVNPIGVRS--CYDEGKRVAETLMFDYHRQHGIEIRIARI 203
           +S V +G   +H  DE+      P        Y E K +AE ++ + + +  +     R 
Sbjct: 114 SSSVIFGGQNIHNGDETL-----PYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALRP 168

Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
              +GP     D  +V      A +G    V   G     F YV ++    I
Sbjct: 169 AGIFGPG----DQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHI 216

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 70.2 bits (172), Expect = 9e-14
 Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 53/264 (20%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-----PRFELIR 87
           MR+LVTGG+G+IGSH   +L++N  ++V+++DN    SK ++   I       P F  + 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVVILDN-LCNSKRSVLPVIERLGGKHPTF--VE 56

Query: 88  HDV-TEPLLIE------VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLG 133
            D+  E LL E      +D + H A           P+ Y  N       NV GTL ++ 
Sbjct: 57  GDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-------NVNGTLRLIS 109

Query: 134 LAKRVGAR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYH 191
             +    + ++ +S++ VYGD    P  ES+     P G  +S Y + K + E ++ D  
Sbjct: 110 AMRAANVKNLIFSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQ 164

Query: 192 R-QHGIEIRIARIFNTYGPR----MNIDDGRVVSN---FIAQAI--RGEPLTV------Q 235
           + Q    I + R FN  G      M  D   + +N   +IAQ    R + L +       
Sbjct: 165 KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT 224

Query: 236 APGTQTRSFCYVSDMVDGLIRLME 259
             GT  R + +V D+ DG +  ME
Sbjct: 225 EDGTGVRDYIHVMDLADGHVAAME 248

Length = 338

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 68.9 bits (169), Expect = 1e-13
 Identities = 64/266 (24%), Positives = 99/266 (37%), Gaps = 53/266 (19%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M+IL+TG  G +G+ L   L      EVI  D                   ++   D   
Sbjct: 1   MKILITGANGQLGTELRRALPGEF--EVIATD---------------RAELDITDPDAVL 43

Query: 93  PLLIEV--DQIYHLACPASPIFYK--YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148
            ++ E   D + + A  A     K    P      N  G  N+   A  VGAR++  ST 
Sbjct: 44  EVIRETRPDVVINAA--AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTD 101

Query: 149 EVY---GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
            V+           D       NP+ V   Y   K   E  +     +H I +R + ++ 
Sbjct: 102 YVFDGEKGGPYKETDT-----PNPLNV---YGRSKLAGEEAVRAAGPRHLI-LRTSWVYG 152

Query: 206 TYGPRMNIDDGRVVSNFIAQAIR----GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
            YG           +NF+   +R    G+ L V     Q  S  Y  D+ D ++ L+E E
Sbjct: 153 EYG-----------NNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKE 199

Query: 262 NTGPI-NIGNPGEFTMLELAENVKEV 286
             G + ++ N GE +  E A+ + E 
Sbjct: 200 KEGGVYHLVNSGECSWYEFAKAIFEE 225

Length = 281

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 67.8 bits (166), Expect = 4e-13
 Identities = 62/260 (23%), Positives = 98/260 (37%), Gaps = 37/260 (14%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEP 93
           ILVTG AG +G  L  +L  +    VI VD        + R+  G  P+ E +R D+ +P
Sbjct: 1   ILVTGAAGGLGRLLARRLAAS--PRVIGVD------GLDRRRPPGSPPKVEYVRLDIRDP 52

Query: 94  LLI------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
                    E D + HLA    P     +  +  + NV GT N+L      G  R+++TS
Sbjct: 53  AAADVFREREADAVVHLAFILDPP---RDGAERHRINVDGTQNVLDACAAAGVPRVVVTS 109

Query: 147 TSEVYG----DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIA 201
           +  VYG    +P    +D       +P      Y   K   E L+ ++ R+H  + + + 
Sbjct: 110 SVAVYGAHPDNPAPLTEDAP--LRGSP---EFAYSRDKAEVEQLLAEFRRRHPELNVTVL 164

Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
           R     GP           N     +    L V         F +  D+   L+  +   
Sbjct: 165 RPATILGPGT--------RNTTRDFLSPRRLPVPGGFDPPFQFLHEDDVARALVLAVRAG 216

Query: 262 NTGPINIGNPGEFTMLELAE 281
            TG  N+   G   +  +  
Sbjct: 217 ATGIFNVAGDGPVPLSLVLA 236

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 67.7 bits (166), Expect = 7e-13
 Identities = 80/288 (27%), Positives = 124/288 (43%), Gaps = 55/288 (19%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGSKDNLRKWIGHPRFELIRHDV 90
            ILVTGGAG+IGSH V +L+     +V+V+DN       +   +++  G     L+ H V
Sbjct: 7   TILVTGGAGYIGSHTVLQLLL-AGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKV 65

Query: 91  T-------EPLLIE--VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
                   E +      D + H A         A P+ Y  N       N++GT+N+L +
Sbjct: 66  DLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDN-------NLVGTINLLEV 118

Query: 135 AKRVGARILLTSTS-EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR- 192
             + G + L+ S+S  VYG P   P  E +     P+   + Y   K   E +  D H  
Sbjct: 119 MAKHGCKKLVFSSSATVYGQPEEVPCTEEF-----PLSATNPYGRTKLFIEEICRDIHAS 173

Query: 193 QHGIEIRIARIFNTYG--PRMNI-DDGRVVSN----FIAQ-AI-RGEPLTV------QAP 237
               +I + R FN  G  P   I +D + + N    ++ Q A+ R   LTV         
Sbjct: 174 DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKD 233

Query: 238 GTQTRSFCYVSDMVDG----LIRLMEGENTG--PINIGNPGEFTMLEL 279
           GT  R + +V D+ DG    L +L    + G    N+G     ++LE+
Sbjct: 234 GTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEM 281

Length = 352

>gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs

 Score = 67.4 bits (165), Expect = 1e-12
 Identities = 80/324 (24%), Positives = 107/324 (33%), Gaps = 85/324 (26%)

Query: 33  MRILVTGGAGFIG----SHLVDKLMENEKNEVIVVDNYFTGSKDN--------------- 73
           M++L+ GG G+ G     HL  +      +EV +VDN      D                
Sbjct: 1   MKVLILGGDGYCGWPTALHLSKR-----GHEVCIVDNLVRRRIDVELGLESLTPIASIHE 55

Query: 74  -LRKW---IGHPRFELIRHDVTEPLL-------IEVDQIYHLA----CPASPIFYKYNPV 118
            LR W    G    E    D  +           E D + H A     P S I  + +  
Sbjct: 56  RLRAWKELTGK-TIEFYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMI-DREHAN 113

Query: 119 KTIKTNVIGTLNMLGLAKRVG--ARILLTSTSEVYGDPLVHPQDESYWGNVN-------- 168
            T   NVIGTLN+L   K       ++   T   YG P +    E Y    +        
Sbjct: 114 YTQHNNVIGTLNLLFAIKEFDPDCHLVKLGTMGEYGTPNI-DIPEGYITIEHNGRRDTLP 172

Query: 169 -PIGVRSCYDEGKRVAETLMFDYHRQHGIEI---RIARIFNTYGPRMNIDD--------- 215
            P    S Y   K      +    +  GI I       ++ T       D+         
Sbjct: 173 YPKQAGSWYHLSKVHDSHNIMFACKAWGIRITDLNQGVVYGTKTEETEADERLINRFDYD 232

Query: 216 ---GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPG 272
              G V++ F  QA  G PLTV   G QTR F  + D V  L   +E       N    G
Sbjct: 233 GVFGTVLNRFCVQAAIGHPLTVYGKGGQTRGFISIRDTVQCLELALE-------NPAKAG 285

Query: 273 EFTML----------ELAENVKEV 286
           E+ +           ELAE V E 
Sbjct: 286 EYRVFNQFTEQFSVGELAEMVAEA 309

Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 69/278 (24%), Positives = 101/278 (36%), Gaps = 43/278 (15%)

Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL 95
            V G  G +GS +V KL              FT         +     EL   D+T    
Sbjct: 1   FVAGHRGLVGSAIVRKLEALG----------FT-------NLVLRTHKEL---DLTRQ-- 38

Query: 96  IEVDQIY---------HLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILL 144
            +V+  +           A     I     Y P   I+ N+    N++  A R G + LL
Sbjct: 39  ADVEAFFAKEKPTYVILAAAKVGGIHANMTY-PADFIRENLQIQTNVIDAAYRHGVKKLL 97

Query: 145 T-STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
              +S +Y      P  E+      P      Y   K     +   Y  Q+G +      
Sbjct: 98  FLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMP 157

Query: 204 FNTYGPRMN--IDDGRVVSNFIAQ----AIRGEPLTVQ-APGTQTRSFCYVSDMVDGLIR 256
            N YGP  N   ++  V+   I +       G P  V    G+  R F +V D+ D ++ 
Sbjct: 158 TNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF 217

Query: 257 LMEG-ENTGPINIGNPGEFTMLELAENVKEVNFYLGRL 293
           LM        +N+G+  E T+ ELAE VKEV  + G L
Sbjct: 218 LMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGEL 255

Length = 306

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 34/269 (12%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M++L+TG +GF+G  L ++L+ +  NE +++ +  +    +     G PR   I  D+  
Sbjct: 1   MKVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKAPS-----GAPRVTQIAGDLAV 55

Query: 93  PLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILL 144
           P LIE       D ++HLA   S      +     + NV GT N+L   ++ G   R + 
Sbjct: 56  PALIEALANGRPDVVFHLAAIVSGGAEA-DFDLGYRVNVDGTRNLLEALRKNGPKPRFVF 114

Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           TS+  VYG PL +P  +     ++P    S Y   K + E L+ DY R+  ++ R  R+ 
Sbjct: 115 TSSLAVYGLPLPNPVTDHT--ALDPA---SSYGAQKAMCELLLNDYSRRGFVDGRTLRL- 168

Query: 205 NTYGPRMNIDDGRVVSNFIAQA-----IRGEPLTVQAPGTQ-TRSFCYV-SDMVDGLIRL 257
               P + +  GR   N  A A     IR EPL  +  G        Y    +   +   
Sbjct: 169 ----PTVCVRPGR--PNKAASAFASTIIR-EPLVGEEAGLPVAEQLRYWLKSVATAVANF 221

Query: 258 MEGENTGPINIGNPGEFTMLELAENVKEV 286
           +          G   + T+  L+  V E 
Sbjct: 222 VHAAELPAEKFGPRRDLTLPGLSVTVGEE 250

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 64.3 bits (157), Expect = 7e-12
 Identities = 64/239 (26%), Positives = 91/239 (38%), Gaps = 39/239 (16%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           ++LVTG  GFIG  LVDKL+   +   I V N                  EL   D    
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRN-------AENAEPSVVLAELPDIDSFTD 53

Query: 94  LLIEVDQIYHLAC------PASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILL 144
           L + VD + HLA                Y  V     N   T  +   A R G +  + L
Sbjct: 54  LFLGVDAVVHLAARVHVMNDQGADPLSDYRKV-----NTELTRRLARAAARQGVKRFVFL 108

Query: 145 TSTSEVYGDPLVH-PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
            S+ +V G+  V  P DE+      P   +  Y   K  AE  + +     G+E+ I R 
Sbjct: 109 -SSVKVNGEGTVGAPFDET--DPPAP---QDAYGRSKLEAERALLELGASDGMEVVILRP 162

Query: 204 FNTYGPRMNIDDGRVVSNF--IAQAI-RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
              YGP +         NF  + + I RG PL   A   + RS   + ++VD +   + 
Sbjct: 163 PMVYGPGVR-------GNFARLMRLIDRGLPLPPGAVKNR-RSLVSLDNLVDAIYLCIS 213

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 23/193 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEV--IVVDNY-FTGSKDNLRK--WIGHPRFELIRH 88
             L+TG  G  GS+L  +L+  +  EV  I   +  F   + +L +   +  PR  L   
Sbjct: 4   VALITGITGQDGSYLA-ELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYG 62

Query: 89  DVTEP-----LLIEV--DQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVG- 139
           D+T+      +L EV  D+IY+LA  +   + ++  P  T   + IGTL +L   + +G 
Sbjct: 63  DLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFE-QPEYTADVDAIGTLRLLEAIRILGE 121

Query: 140 --ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
              R    STSE+YG     PQ E+      P   RS Y   K  A  +  +Y   +G+ 
Sbjct: 122 KKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGLF 176

Query: 198 IRIARIFNTYGPR 210
                +FN   P 
Sbjct: 177 ACNGILFNHESPL 189

Length = 345

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 61/265 (23%), Positives = 97/265 (36%), Gaps = 50/265 (18%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TG  G +G  LV +L   E   V+ +                  + +L   +  E 
Sbjct: 1   RILITGANGQLGRELVQQLS-PEGRVVVALT---------------RSQLDLTDPEALER 44

Query: 94  LL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151
           LL  I  D + + A        + +P K    N +   N+   A R GAR++  ST  V+
Sbjct: 45  LLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVF 104

Query: 152 ----GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
                 P     D       NP+ V   Y + K   E  +        I +R + ++   
Sbjct: 105 DGEGKRPY-REDDA-----TNPLNV---YGQSKLAGEQAVRAAGPNALI-VRTSWLYGGG 154

Query: 208 GPRMNIDDGRVVSNFIAQAIR----GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
           G R          NF+   +R    GE L V     Q  S  Y  D+   +  L++    
Sbjct: 155 GGR----------NFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLAR 202

Query: 264 --GPINIGNPGEFTMLELAENVKEV 286
             G  ++ N G+ +  E A+ + E 
Sbjct: 203 ARGVYHLANSGQCSWYEFAQAIFEE 227

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 61.6 bits (150), Expect = 5e-11
 Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 27/196 (13%)

Query: 36  LVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP- 93
           LVTGG GF+G H+V  L+ E E  EV V D  F+         +       I  DVT+  
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQ--VITYIEGDVTDKQ 58

Query: 94  ----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTS 148
                L   D + H A     +F K      +K NV GT N+L    + G R+L+ TS+ 
Sbjct: 59  DLRRALQGSDVVIHTAA-IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTSSM 117

Query: 149 EV-----YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL--------MFDYHRQHG 195
           EV     YG P+V+  + + +        +  Y E K +AE L        + +  R + 
Sbjct: 118 EVVGPNSYGQPIVNGDETTPY----ESTHQDPYPESKALAEKLVLKANGSTLKNGGRLYT 173

Query: 196 IEIRIARIFNTYGPRM 211
             +R A IF    P +
Sbjct: 174 CALRPAGIFGEGDPFL 189

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 48/202 (23%)

Query: 37  VTGGAGFIGSHLVDKLMENEKNEVIVV----DNYFTGSKDNLRKWIGHPRFELIRH---- 88
           +TG  GF+G  L++KL+ +     I       +  +  +   ++ + +  F+ ++     
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 89  -----DVTEPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIK-TNVIGTLNM 131
                D++EP L            EVD I H A  A+  F +  P   ++ TNV+GT  +
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNA--ATVNFVE--PYSDLRATNVLGTREV 116

Query: 132 LGLAKRVGARILL-TSTSEVYGDPLVHPQDE----------SYWGNVNPIGVRSCYDEGK 180
           L LAK++        ST+ V G+     +++             G  N       Y + K
Sbjct: 117 LRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNG------YTQSK 170

Query: 181 RVAETLMFDYHRQHGIEIRIAR 202
            +AE L+ +     G+ + I R
Sbjct: 171 WLAEQLVREAAG--GLPVVIYR 190

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 60.0 bits (145), Expect = 3e-10
 Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 29/258 (11%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           +L+TGG G  G+ ++ + ++ +  E+ +        +D++RK   + + +    DV +  
Sbjct: 7   LLITGGTGSFGNAVLRRFLDTDIKEIRIFSRD-EKKQDDMRKKYNNSKLKFYIGDVRDYR 65

Query: 95  LI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
            I      VD IYH A        +++P++ +KTNV+GT N+L  A   G  R++  ST 
Sbjct: 66  SILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAAIANGVKRVVCLST- 124

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
               D  V+P        +N +G+     E   VA++   D  +     I   R  N   
Sbjct: 125 ----DKAVYP--------INAMGISKAMMEKVMVAKSRNVDSSKT---VICGTRYGNVMA 169

Query: 209 PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINI 268
            R     G V+  F+     G+PLT+  P   TR    + D VD ++   E  N G I +
Sbjct: 170 SR-----GSVIPLFVDLIKAGKPLTITDP-NMTRFMMTLEDAVDLVLYAFEHGNNGDIFV 223

Query: 269 GNPGEFTMLELAENVKEV 286
                 T+  LA  +KE+
Sbjct: 224 QKAPAATIETLAIALKEL 241

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 59.7 bits (145), Expect = 3e-10
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 20/122 (16%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDV 90
           + VTGG GF+G HLV +L+EN    +++V +      +   +         R  ++  D+
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRS--ESLGEAHERIEEAGLEADRVRVLEGDL 58

Query: 91  TEP-----------LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
           T+P           L  +VD + H A  AS   ++       +TN+ GT ++L LA R+ 
Sbjct: 59  TQPNLGLSAAASRELAGKVDHVIHCA--ASY-DFQAPNEDAWRTNIDGTEHVLELAARLD 115

Query: 140 AR 141
            +
Sbjct: 116 IQ 117

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 58.9 bits (143), Expect = 5e-10
 Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 39/239 (16%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
             LV GG+GF+G HLV++L+      V V D   T   D         R +    D+T+P
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSS----SGRVQFHTGDLTDP 56

Query: 94  LLIE-------VDQIYHLACPAS----PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 142
             +E        + ++H A P       ++Y        K NV GT N++   ++ G + 
Sbjct: 57  QDLEKAFNEKGPNVVFHTASPDHGSNDDLYY--------KVNVQGTRNVIEACRKCGVKK 108

Query: 143 LL--TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG----I 196
           L+  +S S V+    +   DES      P   +  Y+E K +AE L+   +         
Sbjct: 109 LVYTSSASVVFNGQDIINGDESL---PYPDKHQDAYNETKALAEKLVLKANDPESGLLTC 165

Query: 197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
            +R A IF   GP     D ++V   +  A  G+       G     F YV ++    I
Sbjct: 166 ALRPAGIF---GPG----DRQLVPGLLKAAKNGKTKFQIGDGNNLFDFTYVENVAHAHI 217

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 27/129 (20%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF---TGSKDNLRKWI---GHPRFELI 86
           MR  VTGG GFIG  LV +L++  +   +    +      S   L       G  R   +
Sbjct: 1   MRYFVTGGTGFIGRRLVSRLLDRRREATV----HVLVRRQSLSRLEALAAYWGADRVVPL 56

Query: 87  RHDVTEPLL----------IEVDQIYHLACPASPIFYKYNP--VKTIKTNVIGTLNMLGL 134
             D+TEP L           ++D + HLA       Y            NV GT N++ L
Sbjct: 57  VGDLTEPGLGLSEADIAELGDIDHVVHLAA-----IYDLTADEEAQRAANVDGTRNVVEL 111

Query: 135 AKRVGARIL 143
           A+R+ A   
Sbjct: 112 AERLQAATF 120

Length = 657

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 32/276 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHD 89
            +LVTG  GFI SH+V++L++        V +        L+  +       R E +  D
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRS--LSKSAKLKALLKAAGYNDRLEFVIVD 58

Query: 90  VT------EPLLIEVDQIYHLACPASPIFYKYNPVKT--IKTNVIGTLNMLGLAKRVGA- 140
                   +  L  VD + H+   ASP  +     +   I   V GTLN+L  AK  G+ 
Sbjct: 59  DLTAPNAWDEALKGVDYVIHV---ASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSV 115

Query: 141 -RILLTSTSEVYGDPLVHPQ----DESYWGNVNPIGVRS--CYDEGKRVAETLMFDYHRQ 193
            R++LTS+    GDP          E  W ++          Y   K +AE   +++ ++
Sbjct: 116 KRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKE 175

Query: 194 HGIEIRIARIFNTY--GPRMNIDDGRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDM 250
           +  +  +  I   Y  GP +  D+    +  I + + G+ P            +  V D+
Sbjct: 176 NKPKFELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPF---GYVDVRDV 232

Query: 251 VDGLIRLME-GENTGPINIGNPGEFTMLELAENVKE 285
            D  +R +E  E  G   I + G F+  E+A+ ++E
Sbjct: 233 ADAHVRALESPEAAGQRFIVSAGPFSFQEIADLLRE 268

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 55.8 bits (135), Expect = 5e-09
 Identities = 53/263 (20%), Positives = 92/263 (34%), Gaps = 49/263 (18%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
             V G +G IG  +  + +     +V +V         +  K    P  E++  D  +  
Sbjct: 2   AHVLGASGPIGREVA-RELRRRGWDVRLVSR-------SGSKLAWLPGVEIVAADAMDAS 53

Query: 95  LIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
            +       D IYH A PA   + +  P   +  NV+        A+  GA+++L     
Sbjct: 54  SVIAAARGADVIYHCANPAYTRWEELFP--PLMENVVAA------AEANGAKLVLPGNVY 105

Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGK-RVA-ETLMFDYHRQHGIEIRIARIFNTY 207
           +YG     P  E       P        +G+ R   E  +   H +  I   I R  + Y
Sbjct: 106 MYGPQAGSPITEDT--PFQPTT-----RKGRIRAEMEERLLAAHAKGDIRALIVRAPDFY 158

Query: 208 GPRMNIDDGRVVSNFIAQAI----RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME---- 259
           GP         +++++  A+    +G+             + Y+ D+   L+ L E    
Sbjct: 159 GP-------GAINSWLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDA 211

Query: 260 -GENTGPINIGNPGEFTMLELAE 281
            GE     ++   G  T  EL  
Sbjct: 212 FGE---AWHLPGAGAITTRELIA 231

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 55.3 bits (134), Expect = 6e-09
 Identities = 66/271 (24%), Positives = 107/271 (39%), Gaps = 58/271 (21%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           +IL+TG  G +G  LV  L E    EVI                 G  R  L + D+T+P
Sbjct: 1   KILITGATGMLGRALVRLLKERGY-EVIG---------------TGRSRASLFKLDLTDP 44

Query: 94  L-LIEV------DQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
             + E       D I + A       C + P           + NV+   N+   AK VG
Sbjct: 45  DAVEEAIRDYKPDVIINCAAYTRVDKCESDPE-------LAYRVNVLAPENLARAAKEVG 97

Query: 140 ARILLTSTSEVY---GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
           AR++  ST  V+     P    +D       NP+ V   Y + K + E  + + + ++ I
Sbjct: 98  ARLIHISTDYVFDGKKGPYK-EEDAP-----NPLNV---YGKSKLLGEVAVLNANPRYLI 148

Query: 197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
            +R + +   YG   N      V   +  A   + + V     Q  S  Y +D+ D ++ 
Sbjct: 149 -LRTSWL---YGELKN--GENFVEWMLRLAAERKEVNVVH--DQIGSPTYAADLADAILE 200

Query: 257 LME-GENTGPINIGNPGEFTMLELAENVKEV 286
           L+E    TG  ++ N G  +  E A+ + + 
Sbjct: 201 LIERNSLTGIYHLSNSGPISKYEFAKLIADA 231

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 55.3 bits (133), Expect = 7e-09
 Identities = 61/283 (21%), Positives = 103/283 (36%), Gaps = 49/283 (17%)

Query: 35  ILVTGGAGFIGSHLVDKLME-------------NEKNEVIVVDNYFTGSKDNLRKWIGHP 81
           +LVTG +GF+ SH+V++L+E               K    ++D         L    G  
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLD---------LDAKPGR- 50

Query: 82  RFELIRHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
             EL   D+T+    +        ++H+A P S  F   +P + IK  + GTLN L  A 
Sbjct: 51  -LELAVADLTDEQSFDEVIKGCAGVFHVATPVS--FSSKDPNEVIKPAIGGTLNALKAAA 107

Query: 137 RVGA--RILLTSTSEVYGDPLVHPQ----DESYWGNVN-------PIGVRSCYDEGKRVA 183
              +  R +LTS++     P  + +    DE  W              V   Y   K +A
Sbjct: 108 AAKSVKRFVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWV---YAASKTLA 164

Query: 184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA-PGTQTR 242
           E   + +  ++ I++       T G   + +     S +    I G      A       
Sbjct: 165 EKAAWKFADENNIDLITVIPTLTIGTIFDSETPS-SSGWAMSLITGNEGVSPALALIPPG 223

Query: 243 SFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKE 285
            + +V D+    I  +E        I   G F    L + +++
Sbjct: 224 YYVHVVDICLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRK 266

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 55.6 bits (134), Expect = 7e-09
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 23/168 (13%)

Query: 36  LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNL---RKWIGHPRFELIRHDV 90
           LVTGG GF+G H++  L+E ++   E+ V+D  F    + +    K  G      I  D+
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAF--GPELIEHFEKSQGKTYVTDIEGDI 60

Query: 91  T--EPLLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL- 144
                L      V  + H A     +F   N  +  + NV GT  +L    +   + L+ 
Sbjct: 61  KDLSFLFRACQGVSVVIHTAAIVD-VFGPPNYEELEEVNVNGTQAVLEACVQNNVKRLVY 119

Query: 145 TSTSEV-----YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM 187
           TS+ EV      G P+ +  +++ + + +       Y   K +AE ++
Sbjct: 120 TSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPP----YASSKLLAENIV 163

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 55.3 bits (134), Expect = 8e-09
 Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 31/184 (16%)

Query: 37  VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP----RFELIRHDVTE 92
           VTG +GFIGS LV +L++        V +   G +  +   +       R +L + D+ +
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRD--PGDEKKVAHLLELEGAKERLKLFKADLLD 60

Query: 93  PLLIE-----VDQIYHLACPASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGA--RILL 144
               +      D ++H+A P    F  +    + I+  V GTLN+L    +  +  R++ 
Sbjct: 61  YGSFDAAIDGCDGVFHVASP--VDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVF 118

Query: 145 T-STSEVYGDPLVHPQ---DESYWGNVNPIGVRSC------YDEGKRVAETLMFDYHRQH 194
           T S + V  +P        DES W +++      C      Y   K +AE   +++  ++
Sbjct: 119 TSSVAAVVWNPNRGEGKVVDESCWSDLD-----FCKKTKLWYALSKTLAEKAAWEFAEEN 173

Query: 195 GIEI 198
           G+++
Sbjct: 174 GLDL 177

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 39/263 (14%)

Query: 29  FQSNMRILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYFT--GSKDNLRKWIGH 80
           F    ++LVTG  GF GS L   L+E          +     N F        +    G 
Sbjct: 1   FWQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGD 60

Query: 81  PR-FELIRHDVTEPLLIEVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAK 136
            R    +R  + E    + + ++HLA  A P+    Y   P++T +TNV+GT+N+L   +
Sbjct: 61  IRDAAKLRKAIAE---FKPEIVFHLA--AQPLVRKSYAD-PLETFETNVMGTVNLLEAIR 114

Query: 137 RVG---ARILLTSTSEVYGDPLVHPQDESYWG--NVNPIGVRSCYDEGKRVAETLMFDYH 191
            +G   A + +T + + Y +      DE  WG    +P+G    Y   K  AE ++  Y 
Sbjct: 115 AIGSVKAVVNVT-SDKCYRN------DEWVWGYRETDPLGGHDPYSSSKACAELVIASYR 167

Query: 192 R-------QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF 244
                    HGI+I  AR  N  G     +D R++ + I      + + ++ P   TR +
Sbjct: 168 SSFFGVANFHGIKIASARAGNVIGGGDWAED-RLIPDVIRAFSSNKIVIIRNP-DATRPW 225

Query: 245 CYVSDMVDGLIRLMEGENTGPIN 267
            +V + + G + L E   TG   
Sbjct: 226 QHVLEPLSGYLLLAEKLFTGQAE 248

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 52.3 bits (126), Expect = 9e-08
 Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 40/207 (19%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVV------------------DNYFTGSKDNLR 75
            +L+TG  GF+G++L+ +L++ +    I                      Y         
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGL--NLWDE 58

Query: 76  KWIGHPRFELIRHDVTEPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIKTN 124
             +   R +++  D+++P L            EVD I H    A+ + + Y   +    N
Sbjct: 59  LEL--SRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIH--NGAN-VNWVYPYEELKPAN 113

Query: 125 VIGTLNMLGLA-KRVGARILLTSTSEVYGDPLVHPQDESYWGN--VNPIGVRSCYDEGKR 181
           V+GT  +L LA       +   ST  V+     +  D+    +   +  G+ + Y + K 
Sbjct: 114 VLGTKELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGYIQSKW 173

Query: 182 VAETLMFDYHRQHGIEIRIARIFNTYG 208
           VAE L+ +   + G+ + I R  N +G
Sbjct: 174 VAEKLLREAANR-GLPVAIIRPGNIFG 199

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 56/182 (30%), Positives = 74/182 (40%), Gaps = 30/182 (16%)

Query: 34  RILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGHPRFE--LIRHDV 90
           RIL+TGG G IGS L   L +   K+ VI  D         +RK   H          DV
Sbjct: 1   RILITGGLGQIGSELAKLLRKRYGKDNVIASD---------IRKPPAHVVLSGPFEYLDV 51

Query: 91  TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
            +   +E       +  I HLA   S +  K NP      N+ G  N+L LA+    RI 
Sbjct: 52  LDFKSLEEIVVNHKITWIIHLAALLSAVGEK-NPPLAWDVNMNGLHNVLELAREHNLRIF 110

Query: 144 LTSTSEVYGD--PLVH-PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
           + ST   +G   P  + P D        P   R+ Y   K  AE L   YH + G++ R 
Sbjct: 111 VPSTIGAFGPTTPRNNTPDDTI----QRP---RTIYGVSKVAAELLGEYYHHKFGVDFRS 163

Query: 201 AR 202
            R
Sbjct: 164 LR 165

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 23/118 (19%)

Query: 29  FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-----GHPRF 83
             +N  IL+TGG G  G   + +L+EN   + I++  Y   S+D L++W        P  
Sbjct: 1   MFNNKSILITGGTGSFGKAFISRLLENYNPKKIII--Y---SRDELKQWEMQQKFPAPCL 55

Query: 84  ELIRHDVT-----EPLLIEVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNML 132
                DV         L  VD + H A     PA+    +YNP + I+TN+ G  N++
Sbjct: 56  RFFIGDVRDKERLTRALRGVDYVVHAAALKQVPAA----EYNPFECIRTNINGAQNVI 109

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 16/122 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           M++LVTG  GF+GS +V  L+E  E+  V+V          + R   G    E++  D+ 
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPT------SDRRNLEGLD-VEIVEGDLR 53

Query: 92  EPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLT 145
           +P  +         ++H+A  A    +  +P +    NV GT N+L  A   G  R++ T
Sbjct: 54  DPASLRKAVAGCRALFHVA--ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYT 111

Query: 146 ST 147
           S+
Sbjct: 112 SS 113

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 42/144 (29%), Positives = 58/144 (40%), Gaps = 28/144 (19%)

Query: 73  NLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML 132
           NLR+ I          D  +P      +IY+LA  +        P  T   + IGTL +L
Sbjct: 69  NLRRII----------DEIKP-----TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLL 113

Query: 133 ------GLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL 186
                 GL K V  +    STSE+YG     PQ+E+      P   RS Y   K  A  +
Sbjct: 114 EAVRTLGLIKSV--KFYQASTSELYGKVQEIPQNET-----TPFYPRSPYAAAKLYAHWI 166

Query: 187 MFDYHRQHGIEIRIARIFNTYGPR 210
             +Y   +G+      +FN   PR
Sbjct: 167 TVNYREAYGLFAVNGILFNHESPR 190

Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343

>gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK 71
          I+VTGGAGFIGS++V  L +    +++VVDN   G+K
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK 38

Length = 308

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 59/276 (21%), Positives = 92/276 (33%), Gaps = 57/276 (20%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTG  G +G  L   L   E+   +V               +  P  +L   +    L
Sbjct: 1   ILVTGANGQLGRELTRLL--AERGVEVVA--------------LDRPELDLTDPEAVAAL 44

Query: 95  LIEV--DQIYHLACPASPIFY------KYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
           + E   D + + A       Y      +  P      N +G  N+       GA ++  S
Sbjct: 45  VREARPDVVVNAA------AYTAVDKAESEPELAYAVNALGPGNLAEACAARGAPLIHIS 98

Query: 147 TSEVY-GDPLV--HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
           T  V+ G         D        P+ V   Y   K   E  +   + +H I +R A +
Sbjct: 99  TDYVFDGAKGGPYREDDP-----TGPLNV---YGRTKLAGEQAVLAANPRHLI-LRTAWV 149

Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
           +  YG   N      V   +  A   + L V     Q  S     D+ D L+ L+     
Sbjct: 150 YGEYGN--NF-----VKTMLRLAAERDELRVVD--DQLGSPTSARDLADALLALIRKRLR 200

Query: 264 GP-----INIGNPGEFTMLELAENV-KEVNFYLGRL 293
           GP      ++   GE +  + A  +  E     GR+
Sbjct: 201 GPALAGTYHLAGSGETSWYDFARAIFDEAGADGGRV 236

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 43/219 (19%), Positives = 75/219 (34%), Gaps = 43/219 (19%)

Query: 33  MRILVTGGAGFIGSHLVDKLMEN----------EKNE----------VIVVDNYFTGSKD 72
             +L+TG  GF+G++L+ +L++            +++            +  ++   S D
Sbjct: 1   RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSAD 60

Query: 73  NLRKWIGH---PRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL 129
            +    G    P   L      E L   VD I H    A+ + + +   +    NV+GT 
Sbjct: 61  RVEVVAGDLAEPDLGLSERTWQE-LAENVDLIIH---NAALVNHVFPYSELRGANVLGTA 116

Query: 130 NMLGLAKRVGARIL-LTSTSEVYGDPLVH-------PQDESYWGNVNPIGVRSCYDEGKR 181
            +L LA     + L   S+  V                  +        G    Y   K 
Sbjct: 117 EVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAG---GYGRSKW 173

Query: 182 VAETLMFDYHRQHGIEIRIARIFNTYGP----RMNIDDG 216
           VAE L+ +   + G+ + I R     G      +N  D 
Sbjct: 174 VAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDF 211

Length = 382

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 34/152 (22%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKN-EVIVV----DNYFTGSKD--NLRKWIGHPRFEL 85
             +L+TG  GF+G  L++KL+ +  +   I +     +  +  +    L K     R   
Sbjct: 1   KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60

Query: 86  -----------IRHDVTEP-----------LLIEVDQIYHLACPASPIFYKYNPVKTIKT 123
                      I  D++EP           L+ EV+ I H A  A+  F +    + +  
Sbjct: 61  LNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCA--ATVTFDERLD-EALSI 117

Query: 124 NVIGTLNMLGLAKRV--GARILLTSTSEVYGD 153
           NV+GTL +L LAKR       +  ST+ V GD
Sbjct: 118 NVLGTLRLLELAKRCKKLKAFVHVSTAYVNGD 149

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 20/127 (15%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW-IGHPRFELIRHDVTEP 93
           IL+ G  GFIG  L  +L+  + +EV ++       ++  R          ++  D+ + 
Sbjct: 1   ILILGATGFIGRALARELL-EQGHEVTLLV------RNTKRLSKEDQEPVAVVEGDLRDL 53

Query: 94  LLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
             +      VD + HLA   +P   +       + +V GT N+L  AK  G    +  S+
Sbjct: 54  DSLSDAVQGVDVVIHLA--GAPRDTRDF----CEVDVEGTRNVLEAAKEAGVKHFIFISS 107

Query: 148 SEVYGDP 154
              YGD 
Sbjct: 108 LGAYGDL 114

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 43.2 bits (102), Expect = 9e-05
 Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 35/211 (16%)

Query: 35  ILVTGGAGFIGSHLVDKLMEN-----------EKNEVIVVDNYFTGSKDNLRKW---IGH 80
           +L+TG  GF+G++L+++L+               +E   ++      +   R W   +  
Sbjct: 2   VLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSY-RLWHEDLAR 60

Query: 81  PRFELIRHDVTEPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL 129
            R E++  D++EP L             VD I H     +   Y Y+ ++    NV+GT 
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVN-WVYPYSELR--GANVLGTR 117

Query: 130 NMLGLAKRVGARIL-LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF 188
            +L LA    A+ L   ST  V     +    E       P G+   Y + K VAE L+ 
Sbjct: 118 EVLRLAASGRAKPLHYVSTISVGAAIDLSTVTEDDATVTPPPGLAGGYAQSKWVAELLV- 176

Query: 189 DYHRQHGIEIRIAR----IFNTYGPRMNIDD 215
                 G+ + I R    + N+Y   +N  D
Sbjct: 177 REASDRGLPVTIVRPGRILGNSYTGAINSSD 207

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65
          M+ILVTG  GF+G  +V +L+   +   +    
Sbjct: 1  MKILVTGATGFVGGAVVRELL--ARGHEVRAAV 31

Length = 275

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 33/124 (26%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           +LVTGG+G IG  +   L      +V+VV                  R +++ H+     
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVS-----------------RRDVVVHNAAILD 43

Query: 95  LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK-----RVGARILLTSTSE 149
              +  +                 + I+ NV+GT  +L  A+     +   R +L S+  
Sbjct: 44  DGRLIDL-----------TGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILISSVA 92

Query: 150 VYGD 153
               
Sbjct: 93  GLFG 96

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score = 42.1 bits (98), Expect = 2e-04
 Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 17/187 (9%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEP 93
           + VTG  G+I S +V  L+E        V N       +LR+   G  R  L + D+ + 
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query: 94  LLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
             ++      D ++H A P +      +P + ++  V G   ++  A      R+++TS+
Sbjct: 73  EALKAAIDGCDGVFHTASPVTD-----DPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127

Query: 148 -SEVYGDPLVHPQ---DESYWGNVNPI-GVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
              VY DP   P+   DES W +++     ++ Y  GK VAE   ++  ++ G+++ +  
Sbjct: 128 IGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query: 203 IFNTYGP 209
                GP
Sbjct: 188 PVLVLGP 194

Length = 342

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 10/75 (13%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP- 93
           +LVTG  G++G  LV +L++ E ++V         S + L       R  ++R D+ +P 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQ-EGHQVRA----LVRSPEKLADRPWSERVTVVRGDLEDPE 55

Query: 94  ----LLIEVDQIYHL 104
                L  +D  Y+L
Sbjct: 56  SLRAALEGIDTAYYL 70

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score = 40.0 bits (93), Expect = 8e-04
 Identities = 43/199 (21%), Positives = 92/199 (46%), Gaps = 34/199 (17%)

Query: 35  ILVTGGAGFIGSHLVDKLM--------------ENEKNEVIVVDNYFTGSKDNLRKWIGH 80
           + VTG +G+I S +V  L+              + +K E ++      G+K+ L+ +   
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLA---LDGAKERLKLF--- 61

Query: 81  PRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT--IKTNVIGTLNMLGLAKRV 138
            + +L+     E  +   D ++H    ASP+F+     +T  I   + GT+N+L   K  
Sbjct: 62  -KADLLEESSFEQAIEGCDAVFH---TASPVFFTVKDPQTELIDPALKGTINVLNTCKET 117

Query: 139 GA--RILLTSTSE--VYGDPLVHPQ---DESYWGNVNPI-GVRSCYDEGKRVAETLMFDY 190
            +  R++LTS++   ++  P +      DE+++ + +     ++ Y   K +AE   +++
Sbjct: 118 PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEF 177

Query: 191 HRQHGIEIRIARIFNTYGP 209
            + +GI++ +       GP
Sbjct: 178 AKDNGIDMVVLNPGFICGP 196

Length = 322

>gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 72/313 (23%), Positives = 104/313 (33%), Gaps = 99/313 (31%)

Query: 34  RILVTGGAGFIG----SHLVDKLMENEKNEVIVVDNY----------------FTGSKDN 73
           +++V GG G+ G     HL  +       EV +VDN                      + 
Sbjct: 49  KVMVIGGDGYCGWATALHLSKR-----GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHER 103

Query: 74  LRKW--IGHPRFELIRHDVTEPLLI-------EVDQIYHL----ACPASPIFYKYNPVKT 120
           +R+W  +     EL   D+ +   +       E D + H     + P S I      V T
Sbjct: 104 VRRWKEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRS-RAVFT 162

Query: 121 IKTNVIGTLNMLGLAK--RVGARILLTSTSEVYGDP-------------------LVHPQ 159
              NVIGTLN+L   K       ++   T   YG P                   L +P+
Sbjct: 163 QHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPK 222

Query: 160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI---EIRIARIFNTYGPRMNIDD- 215
             S           S Y   K      +    +  GI   ++    ++        +D+ 
Sbjct: 223 QAS-----------SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEE 271

Query: 216 -----------GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
                      G  ++ F  QA  G PLTV   G QTR F  + D V    R +E     
Sbjct: 272 LINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTV----RCIE----- 322

Query: 265 PINIGNP---GEF 274
            I I NP   GEF
Sbjct: 323 -IAIANPAKPGEF 334

Length = 442

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 33 MRILVTGGAGFIGSHLVDKLMEN 55
          M++ VTG  GFIGS +V +L+  
Sbjct: 1  MKVFVTGATGFIGSAVVRELVAA 23

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	297
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
PLN00016	378	RNA-binding protein; Provisional	99.98
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.98
PLN02778	298	3,5-epimerase/4-reductase	99.98
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.97
PLN02583	297	cinnamoyl-CoA reductase	99.97
CHL00194	317	ycf39 Ycf39; Provisional	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.97
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.97
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.96
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.96
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.96
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.94
PLN02503	605	fatty acyl-CoA reductase 2	99.94
PRK12320	699	hypothetical protein; Provisional	99.94
PRK05865	854	hypothetical protein; Provisional	99.94
PLN02260	668	probable rhamnose biosynthetic enzyme	99.93
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.92
PRK06482	276	short chain dehydrogenase; Provisional	99.91
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.91
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.91
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.91
PRK09135	249	pteridine reductase; Provisional	99.9
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.89
PRK05875	276	short chain dehydrogenase; Provisional	99.89
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.89
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.89
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.89
PRK08263	275	short chain dehydrogenase; Provisional	99.88
PRK07067	257	sorbitol dehydrogenase; Provisional	99.88
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.88
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.87
PRK07775	274	short chain dehydrogenase; Provisional	99.87
PRK06914	280	short chain dehydrogenase; Provisional	99.87
PLN03209	576	translocon at the inner envelope of chloroplast su	99.87
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.87
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.87
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.86
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.86
PRK07074	257	short chain dehydrogenase; Provisional	99.86
PRK06180	277	short chain dehydrogenase; Provisional	99.86
PRK06138	252	short chain dehydrogenase; Provisional	99.86
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.86
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07774	250	short chain dehydrogenase; Provisional	99.86
PRK05876	275	short chain dehydrogenase; Provisional	99.86
PRK07890	258	short chain dehydrogenase; Provisional	99.85
PRK06701	290	short chain dehydrogenase; Provisional	99.85
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.85
PRK12827	249	short chain dehydrogenase; Provisional	99.85
PRK07806	248	short chain dehydrogenase; Provisional	99.85
PRK06128	300	oxidoreductase; Provisional	99.85
PRK12829	264	short chain dehydrogenase; Provisional	99.84
PRK06194	287	hypothetical protein; Provisional	99.84
PRK05717	255	oxidoreductase; Validated	99.84
PRK12746	254	short chain dehydrogenase; Provisional	99.84
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.84
PRK12828	239	short chain dehydrogenase; Provisional	99.84
PRK06182	273	short chain dehydrogenase; Validated	99.84
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.84
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.84
PLN02253	280	xanthoxin dehydrogenase	99.84
PRK06500	249	short chain dehydrogenase; Provisional	99.84
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
PRK07060	245	short chain dehydrogenase; Provisional	99.83
KOG2774	366	consensus NAD dependent epimerase [General functio	99.83
PRK06123	248	short chain dehydrogenase; Provisional	99.83
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.83
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.82
PRK07985	294	oxidoreductase; Provisional	99.82
PRK08628	258	short chain dehydrogenase; Provisional	99.82
PRK09134	258	short chain dehydrogenase; Provisional	99.82
PRK06841	255	short chain dehydrogenase; Provisional	99.82
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.82
PRK06179	270	short chain dehydrogenase; Provisional	99.82
PRK06181	263	short chain dehydrogenase; Provisional	99.82
PRK12744	257	short chain dehydrogenase; Provisional	99.82
PRK09186	256	flagellin modification protein A; Provisional	99.82
PRK06523	260	short chain dehydrogenase; Provisional	99.81
PRK07856	252	short chain dehydrogenase; Provisional	99.81
PRK06196	315	oxidoreductase; Provisional	99.81
PRK12937	245	short chain dehydrogenase; Provisional	99.81
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.81
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.81
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK06398	258	aldose dehydrogenase; Validated	99.81
PRK07814	263	short chain dehydrogenase; Provisional	99.81
PRK05993	277	short chain dehydrogenase; Provisional	99.81
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.81
PRK07024	257	short chain dehydrogenase; Provisional	99.81
PRK07825	273	short chain dehydrogenase; Provisional	99.81
PRK09242	257	tropinone reductase; Provisional	99.81
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK12939	250	short chain dehydrogenase; Provisional	99.8
PRK08264	238	short chain dehydrogenase; Validated	99.8
PRK08324	681	short chain dehydrogenase; Validated	99.8
PRK12743	256	oxidoreductase; Provisional	99.8
PRK07041	230	short chain dehydrogenase; Provisional	99.8
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.8
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.8
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.8
PRK06114	254	short chain dehydrogenase; Provisional	99.8
PRK08339	263	short chain dehydrogenase; Provisional	99.8
PRK10538	248	malonic semialdehyde reductase; Provisional	99.8
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.8
PRK12747	252	short chain dehydrogenase; Provisional	99.79
PRK07326	237	short chain dehydrogenase; Provisional	99.79
PRK08219	227	short chain dehydrogenase; Provisional	99.79
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.79
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.79
PRK07063	260	short chain dehydrogenase; Provisional	99.79
PRK05650	270	short chain dehydrogenase; Provisional	99.79
PRK08589	272	short chain dehydrogenase; Validated	99.79
PRK07478	254	short chain dehydrogenase; Provisional	99.79
PRK07035	252	short chain dehydrogenase; Provisional	99.79
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.79
PRK07577	234	short chain dehydrogenase; Provisional	99.79
PRK08643	256	acetoin reductase; Validated	99.79
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.79
PRK07454	241	short chain dehydrogenase; Provisional	99.79
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.78
PRK08265	261	short chain dehydrogenase; Provisional	99.78
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK12742	237	oxidoreductase; Provisional	99.78
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.78
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.78
PRK05867	253	short chain dehydrogenase; Provisional	99.78
PRK06949	258	short chain dehydrogenase; Provisional	99.78
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.78
PRK09291	257	short chain dehydrogenase; Provisional	99.78
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK05872	296	short chain dehydrogenase; Provisional	99.78
PRK07904	253	short chain dehydrogenase; Provisional	99.77
PRK07069	251	short chain dehydrogenase; Validated	99.77
PRK07109	334	short chain dehydrogenase; Provisional	99.77
PRK06483	236	dihydromonapterin reductase; Provisional	99.77
PRK06101	240	short chain dehydrogenase; Provisional	99.77
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.77
PRK05866	293	short chain dehydrogenase; Provisional	99.77
PRK07677	252	short chain dehydrogenase; Provisional	99.77
PRK08017	256	oxidoreductase; Provisional	99.77
PRK06172	253	short chain dehydrogenase; Provisional	99.77
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.77
PRK08226	263	short chain dehydrogenase; Provisional	99.77
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.76
PRK07102	243	short chain dehydrogenase; Provisional	99.76
PRK08251	248	short chain dehydrogenase; Provisional	99.76
PRK08703	239	short chain dehydrogenase; Provisional	99.76
PRK06139	330	short chain dehydrogenase; Provisional	99.76
PRK08267	260	short chain dehydrogenase; Provisional	99.76
COG2910	211	Putative NADH-flavin reductase [General function p	99.76
PRK08278	273	short chain dehydrogenase; Provisional	99.76
PRK07576	264	short chain dehydrogenase; Provisional	99.76
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.76
PRK07062	265	short chain dehydrogenase; Provisional	99.75
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.75
PRK06057	255	short chain dehydrogenase; Provisional	99.75
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.75
PRK07831	262	short chain dehydrogenase; Provisional	99.75
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.75
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.75
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.75
PRK06197	306	short chain dehydrogenase; Provisional	99.75
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.75
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.75
PRK05693	274	short chain dehydrogenase; Provisional	99.75
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.74
PRK09072	263	short chain dehydrogenase; Provisional	99.74
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.74
PRK06198	260	short chain dehydrogenase; Provisional	99.73
PRK05854	313	short chain dehydrogenase; Provisional	99.73
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.73
PRK06484	520	short chain dehydrogenase; Validated	99.73
PRK06924	251	short chain dehydrogenase; Provisional	99.72
PRK07832	272	short chain dehydrogenase; Provisional	99.72
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.72
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK06940	275	short chain dehydrogenase; Provisional	99.71
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK06125	259	short chain dehydrogenase; Provisional	99.7
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK05884	223	short chain dehydrogenase; Provisional	99.7
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.69
PRK07023	243	short chain dehydrogenase; Provisional	99.69
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.69
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.69
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.69
PRK05855	582	short chain dehydrogenase; Validated	99.69
PLN02780	320	ketoreductase/ oxidoreductase	99.68
PRK07791	286	short chain dehydrogenase; Provisional	99.68
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.68
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.68
PRK06953	222	short chain dehydrogenase; Provisional	99.68
PRK07578	199	short chain dehydrogenase; Provisional	99.68
PRK07201	657	short chain dehydrogenase; Provisional	99.68
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.65
PRK12367	245	short chain dehydrogenase; Provisional	99.65
PRK05599	246	hypothetical protein; Provisional	99.64
PRK08177	225	short chain dehydrogenase; Provisional	99.64
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.63
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.63
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.63
PRK06484	520	short chain dehydrogenase; Validated	99.63
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.6
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.6
KOG0725	270	consensus Reductases with broad range of substrate	99.58
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.56
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.56
PLN00015	308	protochlorophyllide reductase	99.55
KOG1208	314	consensus Dehydrogenases with different specificit	99.55
PRK08303	305	short chain dehydrogenase; Provisional	99.54
PRK08862	227	short chain dehydrogenase; Provisional	99.53
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.52
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.52
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.51
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.5
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.48
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.46
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.46
COG1028	251	FabG Dehydrogenases with different specificities (	99.43
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.39
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.39
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.38
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.35
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.33
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.32
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.3
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.2
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.16
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.15
PTZ00325	321	malate dehydrogenase; Provisional	99.01
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.95
PRK06720	169	hypothetical protein; Provisional	98.9
PRK08309	177	short chain dehydrogenase; Provisional	98.86
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.78
PLN00106	323	malate dehydrogenase	98.78
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.61
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.57
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.55
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.52
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.44
PRK05086	312	malate dehydrogenase; Provisional	98.42
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.38
PRK09620	229	hypothetical protein; Provisional	98.38
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.36
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.35
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.26
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.23
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.22
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.17
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.16
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.09
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.02
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.01
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	98.01
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.98
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.97
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.96
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.96
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.95
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.93
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.86
PLN02383	344	aspartate semialdehyde dehydrogenase	97.86
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.85
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.85
PRK14982	340	acyl-ACP reductase; Provisional	97.84
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.84
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.84
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.82
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.8
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.79
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.72
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.7
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	97.69
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.65
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.61
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.55
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.49
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.49
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.48
COG3268	382	Uncharacterized conserved protein [Function unknow	97.48
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.47
PRK05442	326	malate dehydrogenase; Provisional	97.47
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.47
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.46
PLN02602	350	lactate dehydrogenase	97.45
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.45
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.45
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.43
PRK06223	307	malate dehydrogenase; Reviewed	97.42
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.41
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	97.41
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.4
PRK04148	134	hypothetical protein; Provisional	97.39
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.38
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.37
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.37
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.37
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.33
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.33
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	97.32
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.3
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.29
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.27
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.27
PTZ00117	319	malate dehydrogenase; Provisional	97.25
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.25
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.24
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	97.24
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.23
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.21
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.17
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	97.16
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.09
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.06
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.05
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	97.03
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.01
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	96.99
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.99
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.86
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.85
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.85
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.83
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.78
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	96.78
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.78
PRK08328	231	hypothetical protein; Provisional	96.75
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.73
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.71
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.7
PRK13303	265	L-aspartate dehydrogenase; Provisional	96.68
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.68
PRK09496	453	trkA potassium transporter peripheral membrane com	96.68
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.66
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.66
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.64
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.62
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.59
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.58
PRK08223	287	hypothetical protein; Validated	96.55
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.55
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.49
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.46
PRK09496	453	trkA potassium transporter peripheral membrane com	96.45
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.45
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.45
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.43
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.4
COG4982	866	3-oxoacyl-[acyl-carrier protein]	96.38
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.36
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.33
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.32
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.32
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.3
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.3
TIGR02130	275	dapB_plant dihydrodipicolinate reductase. This nar	96.28
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.24
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.2
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.2
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.19
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.18
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	96.17
PRK05562	223	precorrin-2 dehydrogenase; Provisional	96.17
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.15
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	96.13
TIGR01408	1008	Ube1 ubiquitin-activating enzyme E1. This model re	96.12
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.11
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	96.1
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.09
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.08
PRK08655	437	prephenate dehydrogenase; Provisional	96.0
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.99
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.99
PRK13535	336	erythrose 4-phosphate dehydrogenase; Provisional	95.93
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.92
PRK07411	390	hypothetical protein; Validated	95.91
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.9
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.86
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.85
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.84
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	95.82
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	95.77
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	95.77
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.74
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.71
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.71
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.68
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.65
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.58
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.56
PRK07417	279	arogenate dehydrogenase; Reviewed	95.53
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	95.53
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.52
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.5
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	95.49
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.49
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	95.48
PLN00203	519	glutamyl-tRNA reductase	95.45
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	95.45
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	95.45
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.44
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.42
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.4
PLN03096	395	glyceraldehyde-3-phosphate dehydrogenase A; Provis	95.4
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	95.35
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.35
PRK06444	197	prephenate dehydrogenase; Provisional	95.32
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.26
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.25
KOG4777	361	consensus Aspartate-semialdehyde dehydrogenase [Am	95.21
PRK13304	265	L-aspartate dehydrogenase; Reviewed	95.2
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.13
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.13
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.12
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.02
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.01
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	94.99
PRK04690	468	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.99
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.97
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	94.96
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	94.94
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.88
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.87
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	94.86
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.79
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.79
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.78
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.64
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.62
PRK14851	679	hypothetical protein; Provisional	94.61
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.58
PRK08955	334	glyceraldehyde-3-phosphate dehydrogenase; Validate	94.53
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	94.5
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	94.5
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	94.48
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.46

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.1e-43  Score=278.21  Aligned_cols=270  Identities=77%  Similarity=1.210  Sum_probs=255.4

Q ss_pred             cccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEE
Q 022414           24 RFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        24 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~  103 (297)
                      .......++++|+||||.||||+||++.|..+| ++|++++-........+..+.....++.+..|...+.+.++|-|+|
T Consensus        19 ~~~~~p~~~lrI~itGgaGFIgSHLvdkLm~eg-h~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~Iyh   97 (350)
T KOG1429|consen   19 REQVKPSQNLRILITGGAGFIGSHLVDKLMTEG-HEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYH   97 (350)
T ss_pred             hhcccCCCCcEEEEecCcchHHHHHHHHHHhcC-CeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhh
Confidence            333334457999999999999999999999999 9999999998888888888888899999999999999999999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (297)
                      +|++.++.....++.+++..|..++.+++..|++.+.||++.||+.+||++..++..|+.|.+..|..|++.|...|..+
T Consensus        98 LAapasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~a  177 (350)
T KOG1429|consen   98 LAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVA  177 (350)
T ss_pred             hccCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHH
Confidence            99999998889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCC
Q 022414          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT  263 (297)
Q Consensus       184 e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  263 (297)
                      |.++..+.++.++.+.|.|+.+.|||++..++.+.+..++.+.+++.++.++++|.+.++|.+++|+++.++.+++.+..
T Consensus       178 E~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~  257 (350)
T KOG1429|consen  178 ETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR  257 (350)
T ss_pred             HHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc
Confidence            99999999999999999999999999999998999999999999999999999999999999999999999999999999


Q ss_pred             ccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          264 GPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       264 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +.+|+++++.+|+.||++.+.+..|....++
T Consensus       258 ~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~  288 (350)
T KOG1429|consen  258 GPVNIGNPGEFTMLELAEMVKELIGPVSEIE  288 (350)
T ss_pred             CCcccCCccceeHHHHHHHHHHHcCCCccee
Confidence            9999999999999999999999998776554

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1e-42  Score=304.80  Aligned_cols=265  Identities=74%  Similarity=1.206  Sum_probs=225.6

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      +..+.|||+|||||||||++|++.|+++| ++|++++|......+..........++++..|+.+....++|+|||+|+.
T Consensus       116 ~~~~~mkILVTGatGFIGs~Lv~~Ll~~G-~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~D~ViHlAa~  194 (436)
T PLN02166        116 IGRKRLRIVVTGGAGFVGSHLVDKLIGRG-DEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLEVDQIYHLACP  194 (436)
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCCCccHhHhhhhccCCceEEEECccccccccCCCEEEECcee
Confidence            33467999999999999999999999999 99999998643333222222233468899999998888899999999987


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM  187 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~  187 (297)
                      ..+.....++.+.+..|+.++.+++++|++.+++||++||.++|+.....+.+|+.+...++..|.+.|+.+|.++|+.+
T Consensus       195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~  274 (436)
T PLN02166        195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLA  274 (436)
T ss_pred             ccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHH
Confidence            65544456788889999999999999999999999999999999987666778876655567777889999999999999


Q ss_pred             HHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCccEE
Q 022414          188 FDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPIN  267 (297)
Q Consensus       188 ~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~  267 (297)
                      +.+.+..+++++++||+++|||+.......++..++..+..++.+.+++++++.++++|++|+|++++.+++....|+||
T Consensus       275 ~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~~giyN  354 (436)
T PLN02166        275 MDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEHVGPFN  354 (436)
T ss_pred             HHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCCCceEE
Confidence            99988889999999999999998654445677888888888888888899999999999999999999999877688999


Q ss_pred             ecCCCcccHHHHHHHHHHhhcccCce
Q 022414          268 IGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       268 i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      +++++.+|+.|+++.+.+.+|.+..+
T Consensus       355 Igs~~~~Si~ela~~I~~~~g~~~~i  380 (436)
T PLN02166        355 LGNPGEFTMLELAEVVKETIDSSATI  380 (436)
T ss_pred             eCCCCcEeHHHHHHHHHHHhCCCCCe
Confidence            99999999999999999999976544

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=4.5e-42  Score=301.30  Aligned_cols=263  Identities=73%  Similarity=1.196  Sum_probs=224.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      .++|||||||||||||++|++.|+++| ++|++++|......+.........+++++.+|+.+....++|+|||+|+...
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G-~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~~~  195 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARG-DSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILLEVDQIYHLACPAS  195 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCc-CEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhcCCCEEEEeeeecc
Confidence            457999999999999999999999999 9999998754333332222333457889999999888889999999998766


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHH
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD  189 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  189 (297)
                      +.....++.+.++.|+.++.+++++|++.++|||++||..+|+.....+.+|+.|...+|..+.+.|+.+|.++|+.+..
T Consensus       196 ~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~  275 (442)
T PLN02206        196 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMD  275 (442)
T ss_pred             hhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHH
Confidence            54455678889999999999999999999999999999999987766677787665556666778899999999999999


Q ss_pred             HHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCccEEec
Q 022414          190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIG  269 (297)
Q Consensus       190 ~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i~  269 (297)
                      +.+..+++++++||+.+|||+.......++..++..+..++++.+++++++.++++|++|+|++++.++++...|.||++
T Consensus       276 y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~~g~yNIg  355 (442)
T PLN02206        276 YHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLG  355 (442)
T ss_pred             HHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCCCceEEEc
Confidence            88888999999999999999864434457778888888888888889999999999999999999999987767899999


Q ss_pred             CCCcccHHHHHHHHHHhhcccCce
Q 022414          270 NPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       270 ~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      +++.+++.|+++.+.+.+|.+..+
T Consensus       356 s~~~~sl~Elae~i~~~~g~~~~i  379 (442)
T PLN02206        356 NPGEFTMLELAKVVQETIDPNAKI  379 (442)
T ss_pred             CCCceeHHHHHHHHHHHhCCCCce
Confidence            999999999999999999876544

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.5e-40  Score=285.96  Aligned_cols=256  Identities=27%  Similarity=0.348  Sum_probs=211.1

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc------CCCceEEEecccCCcc-----cC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI------GHPRFELIRHDVTEPL-----LI   96 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~-----~~   96 (297)
                      +.+.+|+|+|||||||||++|++.|+++| ++|++++|........+....      ....+.++.+|+.+..     ..
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLN-QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            44567999999999999999999999999 999999986543222221111      1135788999998753     45


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      ++|+|||+|+.........++...+++|+.++.+++++|++.++ +|||+||..+||.....+..|+     ++..|.+.
T Consensus        90 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~-----~~~~p~~~  164 (348)
T PRK15181         90 NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEE-----RIGRPLSP  164 (348)
T ss_pred             CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCC-----CCCCCCCh
Confidence            79999999997665455567788899999999999999999998 8999999999987655555565     45567788


Q ss_pred             HHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHH
Q 022414          176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                      |+.+|.++|++++.+.++.+++++++||+.+|||+..+..  ..+++.++..+..++++.+++++.+.++++|++|+|++
T Consensus       165 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a  244 (348)
T PRK15181        165 YAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQA  244 (348)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHH
Confidence            9999999999999988888999999999999999865432  24678888888888888888999999999999999999


Q ss_pred             HHHHHhcC----CCccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          254 LIRLMEGE----NTGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       254 ~~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      ++.++..+    .+++||+++++.+|++|+++.+.+.++.
T Consensus       245 ~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~  284 (348)
T PRK15181        245 NLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNL  284 (348)
T ss_pred             HHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCc
Confidence            98877643    2579999999999999999999998873

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=6.7e-40  Score=259.13  Aligned_cols=253  Identities=31%  Similarity=0.451  Sum_probs=225.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCC-CCccchhhhcCCCceEEEecccCCcccC-------CcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~-------~~d~vi~  103 (297)
                      |++|||||.||||+++++.++++.. .+|+.+++-.- .+.+.+..+...++..++++|++|..+.       ++|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            7899999999999999999999863 45777776432 3445566666678999999999986432       5999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCC--CCCCCCCCCCCCCCCCChHHHh
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVH--PQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~--~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      .|+-+....+-..|..+++.|+.++.+|++++++...  ||+|+||..|||.-...  .++|.     +|..|.++|.+|
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~-----tp~~PsSPYSAS  155 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTET-----TPYNPSSPYSAS  155 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccC-----CCCCCCCCcchh
Confidence            9999888888899999999999999999999999884  99999999999987553  56777     899999999999


Q ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHh
Q 022414          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (297)
Q Consensus       180 K~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  259 (297)
                      |+.+..+++.+...+|++++|.|+++-|||+.-+  ..+++.++...+.|+++++.|+|.+.+||+||+|-++++..++.
T Consensus       156 KAasD~lVray~~TYglp~~ItrcSNNYGPyqfp--EKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~  233 (340)
T COG1088         156 KAASDLLVRAYVRTYGLPATITRCSNNYGPYQFP--EKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLT  233 (340)
T ss_pred             hhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCc--hhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHh
Confidence            9999999999999999999999999999999755  46899999999999999999999999999999999999999999


Q ss_pred             cCC-CccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          260 GEN-TGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       260 ~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      ++. +++|||+++...+-.|+++.|++.+|++..
T Consensus       234 kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~  267 (340)
T COG1088         234 KGKIGETYNIGGGNERTNLEVVKTICELLGKDKP  267 (340)
T ss_pred             cCcCCceEEeCCCccchHHHHHHHHHHHhCcccc
Confidence            988 779999999999999999999999998765

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.9e-39  Score=256.83  Aligned_cols=253  Identities=29%  Similarity=0.448  Sum_probs=216.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-------CCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~~a  105 (297)
                      |+||||||.||||++.+.+|++.| ++|++++.-.....+.+...    .+.++++|+.|...       .++|.|||+|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G-~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTG-HEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCC-CeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence            789999999999999999999999 99999999877766554422    26899999998743       3799999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      |.....++-+.|.++++.|+.++.+|++++++.|+ +|||.||+.+||.+...|++|+     .+..|.++||.+|.+.|
T Consensus        76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~-----~~~~p~NPYG~sKlm~E  150 (329)
T COG1087          76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISET-----SPLAPINPYGRSKLMSE  150 (329)
T ss_pred             cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCC-----CCCCCCCcchhHHHHHH
Confidence            99998889999999999999999999999999999 8999999999999999999999     78889899999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCC------C-ChhHHHHHHHHHHcCCC-eEEecC------CceeEeeeeHHHH
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNI------D-DGRVVSNFIAQAIRGEP-LTVQAP------GTQTRSFCYVSDM  250 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~------~-~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~i~v~Dv  250 (297)
                      ++++.+.+..+++++++|-.++.|...+.      . ..++++..++....... +.++|+      |...||+|||.|+
T Consensus       151 ~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DL  230 (329)
T COG1087         151 EILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDL  230 (329)
T ss_pred             HHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHH
Confidence            99999999999999999999988865321      1 13567777766554443 666664      6677999999999


Q ss_pred             HHHHHHHHhcCC----CccEEecCCCcccHHHHHHHHHHhhcccCceee
Q 022414          251 VDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       251 a~~~~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      |++.+.+++.-.    +.+||+++|.-.|..|+++.++++.|.+.++..
T Consensus       231 A~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~  279 (329)
T COG1087         231 ADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEI  279 (329)
T ss_pred             HHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceee
Confidence            999998876422    458999999999999999999999998766543

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=4.3e-37  Score=264.74  Aligned_cols=255  Identities=28%  Similarity=0.476  Sum_probs=205.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccC-Cc-----ccCCcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-EP-----LLIEVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~-----~~~~~d~vi~~  104 (297)
                      +|+|+|||||||||++|++.|+++ | ++|++++|+...    ........+++++.+|+. +.     ...++|+|||+
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~-~~V~~~~r~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~   75 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTD-WEVYGMDMQTDR----LGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPL   75 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCC-CeEEEEeCcHHH----HHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEEC
Confidence            479999999999999999999986 6 899999985321    112223346889999997 43     23479999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCC-CCC-CCCCChHHHhHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGN-VNP-IGVRSCYDEGKRV  182 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~-~~~-~~~~~~Y~~sK~~  182 (297)
                      |+...+.....++...++.|+.++.+++++|++.+.||||+||..+||.....+.+|+.... ..+ ..|.+.|+.+|.+
T Consensus        76 aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~  155 (347)
T PRK11908         76 VAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQL  155 (347)
T ss_pred             cccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHH
Confidence            99766555567788889999999999999999988899999999999876554555553211 011 2456789999999


Q ss_pred             HHHHHHHHHHHhCCcEEEEeeccccCCCCCCC------ChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHH
Q 022414          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNID------DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       183 ~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      +|+.++.+....+++++++||+.+|||+....      ..+++..++..+..++++.+++++++.++++|++|+|++++.
T Consensus       156 ~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~  235 (347)
T PRK11908        156 MDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMK  235 (347)
T ss_pred             HHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHH
Confidence            99999999888899999999999999985421      135778888888888888888888999999999999999999


Q ss_pred             HHhcCC----CccEEecCC-CcccHHHHHHHHHHhhcccC
Q 022414          257 LMEGEN----TGPINIGNP-GEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       257 ~~~~~~----~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +++++.    ++.||++++ ..+|+.|+++.+.+.+|...
T Consensus       236 ~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~  275 (347)
T PRK11908        236 IIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP  275 (347)
T ss_pred             HHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc
Confidence            998752    568999987 47999999999999998543

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=1.4e-36  Score=265.04  Aligned_cols=259  Identities=30%  Similarity=0.440  Sum_probs=198.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh--cCCCceEEEecccCCcc-----cCCcCEEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPL-----LIEVDQIYH  103 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~-----~~~~d~vi~  103 (297)
                      ..|+|||||||||||++|++.|+++|.++|++++|+...........  ....+++++.+|+.+..     ..++|+|||
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViH   92 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTIN   92 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEE
Confidence            35899999999999999999999983289999998643221111000  01136899999998763     347999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCC-----------CC---
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNV-----------NP---  169 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~-----------~~---  169 (297)
                      +|+.........++.+.+..|+.++.+++++|++.+.||||+||..+||.....+.+|+.....           .+   
T Consensus        93 lAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~  172 (386)
T PLN02427         93 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIF  172 (386)
T ss_pred             cccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccccc
Confidence            9997654444455667778899999999999998887999999999998754333333221100           00   


Q ss_pred             ---CCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCC---------ChhHHHHHHHHHHcCCCeEEecC
Q 022414          170 ---IGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID---------DGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       170 ---~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                         ..+.+.|+.+|.++|+.+..+.+..+++++++||++||||+....         ...++..++..+..++++.++++
T Consensus       173 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~  252 (386)
T PLN02427        173 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDG  252 (386)
T ss_pred             CCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECC
Confidence               123467999999999999998887899999999999999985321         12355666677778888888888


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC---CccEEecCC-CcccHHHHHHHHHHhhcc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNP-GEFTMLELAENVKEVNFY  289 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~-~~~s~~e~~~~i~~~~g~  289 (297)
                      +++.++++|++|+|++++.+++++.   +++||++++ +.+++.|+++.+.+.+|.
T Consensus       253 g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        253 GQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             CCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            8999999999999999999998763   458999997 589999999999999884

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.3e-36  Score=258.83  Aligned_cols=252  Identities=23%  Similarity=0.230  Sum_probs=201.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhhcC------CCceEEEecccCCccc-----C--Cc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG------HPRFELIRHDVTEPLL-----I--EV   98 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~------~~~~~~~~~Dl~~~~~-----~--~~   98 (297)
                      |+||||||+||||+++++.|++.| ++|++++|+.... .+.+.....      ..+++++.+|++|...     .  ++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKG-YEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKP   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCC-CEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCC
Confidence            689999999999999999999999 9999999875321 111221110      2358899999998631     2  57


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC----eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~  174 (297)
                      |+|||+|+.........++...+++|+.++.+++++|++.++    +|||+||..+||.....+.+|+     .+..|.+
T Consensus        80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~  154 (343)
T TIGR01472        80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-----TPFYPRS  154 (343)
T ss_pred             CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-----CCCCCCC
Confidence            999999997655444455677778899999999999999874    7999999999997655566776     5677888


Q ss_pred             hHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCC-ChhHHHHHHHHHHcCCC-eEEecCCceeEeeeeHHHHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      .|+.+|.++|.+++.++++.++++++.|+.++|||+.... -...+..++..+..++. ..+++++++.++|+|++|+|+
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~  234 (343)
T TIGR01472       155 PYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVE  234 (343)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHH
Confidence            9999999999999999888889999999999999974221 12344455556666653 345588999999999999999


Q ss_pred             HHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          253 GLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       253 ~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      +++.+++++..+.||+++++++|+.|+++.+.+.+|.+
T Consensus       235 a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~  272 (343)
T TIGR01472       235 AMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKT  272 (343)
T ss_pred             HHHHHHhcCCCccEEecCCCceeHHHHHHHHHHHcCCC
Confidence            99999987767899999999999999999999999964

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=7.5e-36  Score=262.74  Aligned_cols=263  Identities=27%  Similarity=0.311  Sum_probs=199.4

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc----------------chhhh--cCCCceEEEec
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------NLRKW--IGHPRFELIRH   88 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----------------~~~~~--~~~~~~~~~~~   88 (297)
                      ....++|+||||||+||||++|++.|+++| ++|+++++......+                .+...  ....+++++.+
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~  120 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRG-YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVG  120 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEEC
Confidence            344568999999999999999999999999 999998754221110                01000  01235889999


Q ss_pred             ccCCccc-------CCcCEEEEccCCCCCcccccC---hhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCC
Q 022414           89 DVTEPLL-------IEVDQIYHLACPASPIFYKYN---PVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLV  156 (297)
Q Consensus        89 Dl~~~~~-------~~~d~vi~~a~~~~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~  156 (297)
                      |++|...       .++|+|||+|+.........+   ....++.|+.++.+++++|++.++  +||++||..+||... 
T Consensus       121 Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-  199 (442)
T PLN02572        121 DICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-  199 (442)
T ss_pred             CCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-
Confidence            9988632       258999999976443222222   345578999999999999999986  699999999998643 


Q ss_pred             CCCCCCCCC-------C--CCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC------------
Q 022414          157 HPQDESYWG-------N--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD------------  215 (297)
Q Consensus       157 ~~~~e~~~~-------~--~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~------------  215 (297)
                      .+.+|....       .  ..+..|.+.|+.+|.++|.+++.+++.++++++++||+++|||+.....            
T Consensus       200 ~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        200 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence            233332110       0  0245677889999999999999998888999999999999999854310            


Q ss_pred             ---hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-Cc---cEEecCCCcccHHHHHHHHHHh--
Q 022414          216 ---GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TG---PINIGNPGEFTMLELAENVKEV--  286 (297)
Q Consensus       216 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~---~~~i~~~~~~s~~e~~~~i~~~--  286 (297)
                         ...+..++.....++++.+++++++.++++|++|+|++++.+++++. .|   +||+++ +.+|+.|+++.+.+.  
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~  358 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGE  358 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHH
Confidence               24566777777788888888999999999999999999999998653 33   689976 689999999999999  


Q ss_pred             -hcccCc
Q 022414          287 -NFYLGR  292 (297)
Q Consensus       287 -~g~~~~  292 (297)
                       +|.+..
T Consensus       359 ~~g~~~~  365 (442)
T PLN02572        359 KLGLDVE  365 (442)
T ss_pred             hhCCCCC
Confidence             776543

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=4.6e-36  Score=259.35  Aligned_cols=250  Identities=30%  Similarity=0.402  Sum_probs=200.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEE-EEecCCCCCc-cchhhhcCCCceEEEecccCCccc-----C--CcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLL-----I--EVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~-~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~-----~--~~d~vi  102 (297)
                      +|+|||||||||||+++++.|+++| ++++ +++|...... ..+........+.++.+|+++...     .  ++|+||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi   79 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINET-SDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM   79 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcC-CCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence            4789999999999999999999999 6544 4554322111 111111122357888999987632     1  489999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc---------CC-eEEEEecceeecCCC--CCCCCCCCCCCCCCC
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---------GA-RILLTSTSEVYGDPL--VHPQDESYWGNVNPI  170 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~-r~v~~Ss~~~~~~~~--~~~~~e~~~~~~~~~  170 (297)
                      |+||..........+...+++|+.++.+++++|++.         ++ ++|++||..+|+...  ..+++|+     .+.
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~-----~~~  154 (355)
T PRK10217         80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET-----TPY  154 (355)
T ss_pred             ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC-----CCC
Confidence            999976544445567889999999999999999863         45 899999999998642  3356666     566


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  250 (297)
                      .|.+.|+.+|.++|.+++.+.++.+++++++||+++|||+..+  ..++..++.....++++.+++++++.++++|++|+
T Consensus       155 ~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~  232 (355)
T PRK10217        155 APSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP--EKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDH  232 (355)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc--ccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHH
Confidence            6788999999999999999988889999999999999998643  34677777777788878888999999999999999


Q ss_pred             HHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          251 VDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       251 a~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      |++++.+++.+. ++.||+++++.+|+.|+++.+.+.+|.
T Consensus       233 a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~  272 (355)
T PRK10217        233 ARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEE  272 (355)
T ss_pred             HHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcc
Confidence            999999998765 678999999999999999999999885

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=4.5e-36  Score=277.11  Aligned_cols=256  Identities=30%  Similarity=0.507  Sum_probs=208.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi  102 (297)
                      ..+|+|||||||||||++|++.|+++ | ++|++++|......    ......+++++.+|+++.      ...++|+||
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g-~~V~~l~r~~~~~~----~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi  387 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDN-YEVYGLDIGSDAIS----RFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVL  387 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCC-cEEEEEeCCchhhh----hhcCCCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence            46899999999999999999999986 7 99999998653221    122234688999999864      235899999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCC-CCCC-CCCChHHHhH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGN-VNPI-GVRSCYDEGK  180 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~-~~~~-~~~~~Y~~sK  180 (297)
                      |+|+...+.....++...+++|+.++.+++++|++.+.+|||+||.++||.....+++|+.+.. ..+. .|.+.|+.+|
T Consensus       388 HlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK  467 (660)
T PRK08125        388 PLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSK  467 (660)
T ss_pred             ECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHH
Confidence            9999776655566777889999999999999999998899999999999976555667764321 0122 3456899999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCC------ChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHH
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID------DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      .++|++++.+.+.++++++++||+++|||+....      ...++..++..+..++++.+.+++++.++++|++|+|+++
T Consensus       468 ~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~  547 (660)
T PRK08125        468 QLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_pred             HHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHH
Confidence            9999999999888899999999999999985321      1346778888888888888888999999999999999999


Q ss_pred             HHHHhcCC----CccEEecCCC-cccHHHHHHHHHHhhccc
Q 022414          255 IRLMEGEN----TGPINIGNPG-EFTMLELAENVKEVNFYL  290 (297)
Q Consensus       255 ~~~~~~~~----~~~~~i~~~~-~~s~~e~~~~i~~~~g~~  290 (297)
                      +.+++++.    +++||+++++ .+|++|+++.+.+.+|.+
T Consensus       548 ~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        548 FRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             HHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence            99998753    4589999985 799999999999999854

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1.6e-35  Score=256.09  Aligned_cols=257  Identities=26%  Similarity=0.355  Sum_probs=200.7

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEE
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIY  102 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi  102 (297)
                      +.-.+|+|+|||||||||+++++.|.++| ++|++++|.......   .  ......++.+|+++..     ..++|+||
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G-~~V~~v~r~~~~~~~---~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vi   90 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEG-HYIIASDWKKNEHMS---E--DMFCHEFHLVDLRVMENCLKVTKGVDHVF   90 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCC-CEEEEEEeccccccc---c--ccccceEEECCCCCHHHHHHHHhCCCEEE
Confidence            33457999999999999999999999999 999999985422111   0  0113567888998752     34799999


Q ss_pred             EccCCCCCcc-cccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCC----CCCCCCCCCCCCCCCCChH
Q 022414          103 HLACPASPIF-YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVH----PQDESYWGNVNPIGVRSCY  176 (297)
Q Consensus       103 ~~a~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~----~~~e~~~~~~~~~~~~~~Y  176 (297)
                      |+|+...... ...++...+..|+.++.+++++|++.++ +|||+||.++|+.....    +..|+.   ..+..|.+.|
T Consensus        91 h~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~---~~p~~p~s~Y  167 (370)
T PLN02695         91 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESD---AWPAEPQDAY  167 (370)
T ss_pred             EcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCccc---CCCCCCCCHH
Confidence            9998653221 2234455677899999999999999998 89999999999865321    234431   0256678899


Q ss_pred             HHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHc-CCCeEEecCCceeEeeeeHHHHHHH
Q 022414          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIR-GEPLTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                      +.+|.++|+.++.+..+.+++++++||+.+|||+.....  ......++..+.. +.++.+++++++.++++|++|++++
T Consensus       168 g~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~a  247 (370)
T PLN02695        168 GLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEG  247 (370)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHH
Confidence            999999999999988888999999999999999754332  1234556665554 4677888999999999999999999


Q ss_pred             HHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          254 LIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       254 ~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      ++.+++.+..+.||+++++.+|++|+++.+.+..|.+.++
T Consensus       248 i~~~~~~~~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i  287 (370)
T PLN02695        248 VLRLTKSDFREPVNIGSDEMVSMNEMAEIALSFENKKLPI  287 (370)
T ss_pred             HHHHHhccCCCceEecCCCceeHHHHHHHHHHHhCCCCCc
Confidence            9998887667899999999999999999999999875443

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=5e-35  Score=251.33  Aligned_cols=254  Identities=21%  Similarity=0.243  Sum_probs=202.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhhc-----CCCceEEEecccCCccc-------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWI-----GHPRFELIRHDVTEPLL-------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~-----~~~~~~~~~~Dl~~~~~-------~   96 (297)
                      .++|+||||||+||||+++++.|++.| ++|++++|..... .+.+....     ...++.++.+|+++...       .
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKG-YEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCC-CEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            347899999999999999999999999 9999998864321 11222111     12358899999987632       1


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC------eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA------RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      ++|+|||+|+.........++...+++|+.++.+++++|++.++      +||++||..+||.... +++|+     .+.
T Consensus        83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~-----~~~  156 (340)
T PLN02653         83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSET-----TPF  156 (340)
T ss_pred             CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCC-----CCC
Confidence            47999999997654444556777789999999999999998874      7999999999997654 66676     567


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCCeEE-ecCCceeEeeeeHH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTV-QAPGTQTRSFCYVS  248 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~  248 (297)
                      .|.+.|+.+|.++|.+++.+++++++.++..|+.++|||+..... ...+..++..+..+....+ ++++++.++++|++
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~  236 (340)
T PLN02653        157 HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAG  236 (340)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHH
Confidence            788899999999999999998888888889999999999743211 1234455556666665543 48899999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          249 DMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       249 Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      |+|++++.++++...+.||+++++++|+.|+++.+.+.+|.+
T Consensus       237 D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        237 DYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             HHHHHHHHHHhcCCCCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence            999999999987667899999999999999999999999864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=4.5e-35  Score=271.79  Aligned_cols=254  Identities=27%  Similarity=0.411  Sum_probs=206.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecCCCC-CccchhhhcCCCceEEEecccCCcc-------cCCcCEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTG-SKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQI  101 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~-------~~~~d~v  101 (297)
                      .+|+|||||||||||++|++.|+++| .++|++++|.... ....+.......+++++.+|+++..       ..++|+|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V   84 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI   84 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence            46999999999999999999999983 2789988874211 1111111112347889999998752       2479999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCCCCC---CCCCCCCCCCCCCCCChH
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHP---QDESYWGNVNPIGVRSCY  176 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~~~~---~~e~~~~~~~~~~~~~~Y  176 (297)
                      ||+|+.........++.+.++.|+.++.+++++|++.+ + ||||+||..+||.....+   ..|+     .+..|.+.|
T Consensus        85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~-----~~~~p~~~Y  159 (668)
T PLN02260         85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEA-----SQLLPTNPY  159 (668)
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCcccc-----CCCCCCCCc
Confidence            99999776544455677888999999999999999987 6 899999999998764332   2333     455677889


Q ss_pred             HHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHH
Q 022414          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      +.+|.++|++++.+.++.+++++++||+.||||+...  ..+++.++.....++.+.+++++++.++++|++|+|+++..
T Consensus       160 ~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~--~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~  237 (668)
T PLN02260        160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEV  237 (668)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc--ccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHH
Confidence            9999999999999888889999999999999998543  34677777777888888888999999999999999999999


Q ss_pred             HHhcCC-CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          257 LMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       257 ~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +++++. +++||+++++.+++.|+++.+.+.+|.+.
T Consensus       238 ~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~  273 (668)
T PLN02260        238 VLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDP  273 (668)
T ss_pred             HHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCC
Confidence            998765 77999999999999999999999999754

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=7.7e-35  Score=251.45  Aligned_cols=250  Identities=28%  Similarity=0.411  Sum_probs=198.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC-CCccchhhhcCCCceEEEecccCCccc-------CCcCEEEEc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHL  104 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~~  104 (297)
                      |||+|||||||||+++++.|+++|...|+++++... ...+..........+.++.+|+++...       .++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            689999999999999999999998334665655321 111122221112357788999998631       258999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc---------CC-eEEEEecceeecCCCC----------CCCCCCCC
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---------GA-RILLTSTSEVYGDPLV----------HPQDESYW  164 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~-r~v~~Ss~~~~~~~~~----------~~~~e~~~  164 (297)
                      |+.........++.+.+++|+.++.+++++|++.         ++ +||++||.++|+....          .+++|+  
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~--  158 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET--  158 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc--
Confidence            9976543344567888999999999999999874         44 8999999999985311          124454  


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                         ++..|.+.|+.+|.++|++++.+++..+++++++|++.+|||+...  ..++..++..+..+..+.+++++++.+++
T Consensus       159 ---~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  233 (352)
T PRK10084        159 ---TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYGKGDQIRDW  233 (352)
T ss_pred             ---CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc--cchHHHHHHHHhcCCCeEEeCCCCeEEee
Confidence               5667888999999999999999988889999999999999998532  34677777777878778888999999999


Q ss_pred             eeHHHHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          245 CYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      +|++|+|++++.+++++. ++.||+++++.+++.|+++.+.+.+|.
T Consensus       234 v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~  279 (352)
T PRK10084        234 LYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDE  279 (352)
T ss_pred             EEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhcc
Confidence            999999999999988765 679999999999999999999999885

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=6.5e-35  Score=250.09  Aligned_cols=249  Identities=22%  Similarity=0.324  Sum_probs=190.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc-hhhhcC-CCceEEEecccCCcc-----cCCcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-LRKWIG-HPRFELIRHDVTEPL-----LIEVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~Dl~~~~-----~~~~d~vi  102 (297)
                      .++|+|+||||+||||+++++.|+++| ++|+++.|+....... +..... ...++++.+|+++..     +.++|+||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   86 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERG-YTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF   86 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence            357899999999999999999999999 9999999865432111 111111 135788899998753     34799999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecc-eeecCCCC---CCCCCCCCCCCC-CCCCCChH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS-EVYGDPLV---HPQDESYWGNVN-PIGVRSCY  176 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~-~~~~~~~~---~~~~e~~~~~~~-~~~~~~~Y  176 (297)
                      |+|+..     ..++...++.|+.++.+++++|++.++ |||++||. .+|+....   .+++|+.|...+ +..|.+.|
T Consensus        87 h~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y  161 (342)
T PLN02214         87 HTASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWY  161 (342)
T ss_pred             EecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHH
Confidence            999864     245678889999999999999999998 89999996 57875332   246777654322 34467789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHH
Q 022414          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      +.+|.++|++++.+.++.+++++++||+.||||+........+..++ ....++... .  +++.++|+|++|+|++++.
T Consensus       162 ~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~  237 (342)
T PLN02214        162 CYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-Y--ANLTQAYVDVRDVALAHVL  237 (342)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-C--CCCCcCeeEHHHHHHHHHH
Confidence            99999999999999888899999999999999986432222233333 334444332 2  3557899999999999999


Q ss_pred             HHhcCC-CccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          257 LMEGEN-TGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       257 ~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      +++++. .|.||+++ +.+++.|+++.+.+.++.
T Consensus       238 al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~  270 (342)
T PLN02214        238 VYEAPSASGRYLLAE-SARHRGEVVEILAKLFPE  270 (342)
T ss_pred             HHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCC
Confidence            999875 67999987 578999999999999863

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=2.6e-36  Score=251.72  Aligned_cols=227  Identities=27%  Similarity=0.341  Sum_probs=178.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-------cCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-------~~~~d~vi~~a  105 (297)
                      ||||||||+|++|++|++.|.++| ++|+++.|.                    ..|+.+..       ..++|+|||||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~-~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~~pd~Vin~a   59 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERG-YEVIATSRS--------------------DLDLTDPEAVAKLLEAFKPDVVINCA   59 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTS-EEEEEESTT--------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCC-CEEEEeCch--------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence            899999999999999999999998 999999874                    34554431       23699999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      +.+.+...+.+++..+.+|+.++.+++++|.+.|+++||+||..||+.....+++|+     +++.|.+.||.+|.++|+
T Consensus        60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~-----d~~~P~~~YG~~K~~~E~  134 (286)
T PF04321_consen   60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTED-----DPPNPLNVYGRSKLEGEQ  134 (286)
T ss_dssp             ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TT-----S----SSHHHHHHHHHHH
T ss_pred             eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccC-----CCCCCCCHHHHHHHHHHH
Confidence            998888888999999999999999999999999999999999999988777778888     688899999999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCC--
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT--  263 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--  263 (297)
                      .+++..    -++.|+|++++||+.    ..+++..++..+.+++.+.+..  +..+.+++++|+|+++..++++...  
T Consensus       135 ~v~~~~----~~~~IlR~~~~~g~~----~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~  204 (286)
T PF04321_consen  135 AVRAAC----PNALILRTSWVYGPS----GRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGA  204 (286)
T ss_dssp             HHHHH-----SSEEEEEE-SEESSS----SSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-G
T ss_pred             HHHHhc----CCEEEEecceecccC----CCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhccccc
Confidence            987633    378999999999993    3568889999998998887654  6788999999999999999998775  


Q ss_pred             ---ccEEecCCCcccHHHHHHHHHHhhcccC-ceee
Q 022414          264 ---GPINIGNPGEFTMLELAENVKEVNFYLG-RLLV  295 (297)
Q Consensus       264 ---~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~  295 (297)
                         |+||+++++.+|+.||++.+.+.+|.+. .+.+
T Consensus       205 ~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~  240 (286)
T PF04321_consen  205 SPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKP  240 (286)
T ss_dssp             GG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEE
T ss_pred             ccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEe
Confidence               9999999999999999999999999997 4443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=8.1e-35  Score=250.75  Aligned_cols=252  Identities=23%  Similarity=0.283  Sum_probs=200.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-------CCcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi  102 (297)
                      +++|+|+||||+||||+++++.|+++| ++|++++|+................+.++.+|+++...       .++|+||
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   80 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELG-AEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVF   80 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCC-CEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence            357999999999999999999999999 99999998754332211111112357788999987631       2579999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCCC-CCCCCCCCCCCCCCCCCChHHHh
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLV-HPQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~~-~~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      |+|+.........++...+++|+.++.+++++|++.+ + ++|++||..+|+.... .+.+|+     .+..|.+.|+.+
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~-----~~~~p~~~Y~~s  155 (349)
T TIGR02622        81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRET-----DPLGGHDPYSSS  155 (349)
T ss_pred             ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccC-----CCCCCCCcchhH
Confidence            9999655545566788899999999999999999877 5 8999999999986422 345555     456677889999


Q ss_pred             HHHHHHHHHHHHHHh-------CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHH
Q 022414          180 KRVAETLMFDYHRQH-------GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       180 K~~~e~~~~~~~~~~-------~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      |.++|.+++.++...       +++++++||+.+|||+... ..++++.++.....++.+.+ +++++.++|+|++|+|+
T Consensus       156 K~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~  233 (349)
T TIGR02622       156 KACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA-EDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLS  233 (349)
T ss_pred             HHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch-hhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHH
Confidence            999999999887654       8999999999999997422 24577888888888887765 67899999999999999


Q ss_pred             HHHHHHhcC------CCccEEecCC--CcccHHHHHHHHHHhhcc
Q 022414          253 GLIRLMEGE------NTGPINIGNP--GEFTMLELAENVKEVNFY  289 (297)
Q Consensus       253 ~~~~~~~~~------~~~~~~i~~~--~~~s~~e~~~~i~~~~g~  289 (297)
                      +++.++++.      .++.||++++  ++++..|+++.+.+.++.
T Consensus       234 a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~  278 (349)
T TIGR02622       234 GYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG  278 (349)
T ss_pred             HHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence            999887642      2579999975  689999999999987653

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=1.9e-35  Score=248.97  Aligned_cols=225  Identities=21%  Similarity=0.157  Sum_probs=183.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-------CCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~~a  105 (297)
                      |+||||||+||||+++++.|+++| . |++++|...                .+.+|++|...       .++|+|||||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~-V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   62 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-N-LIALDVHST----------------DYCGDFSNPEGVAETVRKIRPDVIVNAA   62 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-C-EEEeccccc----------------cccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            689999999999999999999998 4 788877421                23467776521       2589999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      +.........++...+++|+.++.+++++|++.|+++||+||..+|+.....+++|+     ++..|.+.|+.+|.++|+
T Consensus        63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~-----~~~~P~~~Yg~sK~~~E~  137 (299)
T PRK09987         63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQET-----DATAPLNVYGETKLAGEK  137 (299)
T ss_pred             ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCC-----CCCCCCCHHHHHHHHHHH
Confidence            987765566778888899999999999999999999999999999987766678887     677888899999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC--CceeEeeeeHHHHHHHHHHHHhcCC-
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP--GTQTRSFCYVSDMVDGLIRLMEGEN-  262 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~~-  262 (297)
                      .++.+.    .+++++|++++|||+.    .+++..++..+.+++++.++++  +.+.+...+++|+++++..++..+. 
T Consensus       138 ~~~~~~----~~~~ilR~~~vyGp~~----~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~  209 (299)
T PRK09987        138 ALQEHC----AKHLIFRTSWVYAGKG----NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV  209 (299)
T ss_pred             HHHHhC----CCEEEEecceecCCCC----CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC
Confidence            987653    3579999999999973    3577788888888888888776  5555555567777888877776544 


Q ss_pred             CccEEecCCCcccHHHHHHHHHHhhc
Q 022414          263 TGPINIGNPGEFTMLELAENVKEVNF  288 (297)
Q Consensus       263 ~~~~~i~~~~~~s~~e~~~~i~~~~g  288 (297)
                      .|+||+++++.+|+.|+++.+.+..+
T Consensus       210 ~giyni~~~~~~s~~e~~~~i~~~~~  235 (299)
T PRK09987        210 AGLYHLVASGTTTWHDYAALVFEEAR  235 (299)
T ss_pred             CCeEEeeCCCCccHHHHHHHHHHHHH
Confidence            68999999999999999999988654

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=5.5e-35  Score=247.84  Aligned_cols=238  Identities=22%  Similarity=0.286  Sum_probs=183.6

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc---------c-----cCCcCE
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP---------L-----LIEVDQ  100 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---------~-----~~~~d~  100 (297)
                      |+||||+||||++|++.|+++| ++++++.|+...... ..        ++.++|+.|.         .     ..++|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g-~~~v~~~~~~~~~~~-~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~   71 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTK-FV--------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEA   71 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCC-CceEEEecCCCcchH-HH--------hhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence            8999999999999999999999 766666554322111 00        1112222221         1     126899


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhH
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      |||+||.....  ..++...++.|+.++.+++++|++.+++||++||.++|+.....+.+|+     ++..|.+.|+.+|
T Consensus        72 Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK  144 (308)
T PRK11150         72 IFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEER-----EYEKPLNVYGYSK  144 (308)
T ss_pred             EEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccC-----CCCCCCCHHHHHH
Confidence            99999865432  2244567899999999999999999999999999999997654455555     4667778899999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEe-cCCceeEeeeeHHHHHHHHHHH
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQ-APGTQTRSFCYVSDMVDGLIRL  257 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~  257 (297)
                      .++|+.++.+....+++++++||+++|||+.....  ......+...+.++....++ ++++..++++|++|+|++++.+
T Consensus       145 ~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~  224 (308)
T PRK11150        145 FLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWF  224 (308)
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHH
Confidence            99999999988778999999999999999864421  22344555667777655444 5667789999999999999999


Q ss_pred             HhcCCCccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          258 MEGENTGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       258 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      ++...++.||+++++.+|+.|+++.+.+.+|.
T Consensus       225 ~~~~~~~~yni~~~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        225 WENGVSGIFNCGTGRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             HhcCCCCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence            98776789999999999999999999999884

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=4.2e-35  Score=242.98  Aligned_cols=247  Identities=28%  Similarity=0.350  Sum_probs=191.1

Q ss_pred             EEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccCCCC
Q 022414           36 LVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLACPAS  109 (297)
Q Consensus        36 lItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~~~~  109 (297)
                      |||||+||+|++|+++|+++|. ++|+++++........  ........+++++|+++.     ++.++|+|||+|++..
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~   78 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP   78 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence            6999999999999999999994 6888888765433211  111112344999999986     5668999999998765


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCC-CCCC---CCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL-VHPQ---DESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~-~~~~---~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      ... ....+.++++|+.++++++++|++.++ ||||+||..+++.+. ..++   +|+.+   .+..+...|..+|.++|
T Consensus        79 ~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~---~~~~~~~~Y~~SK~~AE  154 (280)
T PF01073_consen   79 PWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTP---YPSSPLDPYAESKALAE  154 (280)
T ss_pred             ccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCc---ccccccCchHHHHHHHH
Confidence            422 456778999999999999999999999 899999999987622 2222   33321   23336678999999999


Q ss_pred             HHHHHHHH---H--hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHh
Q 022414          185 TLMFDYHR---Q--HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (297)
Q Consensus       185 ~~~~~~~~---~--~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  259 (297)
                      +++++...   +  ..+.++++||+.||||+..    .+.+.+......+......+++....++++++|+|.+++.+.+
T Consensus       155 ~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~----~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~  230 (280)
T PF01073_consen  155 KAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ----RLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQ  230 (280)
T ss_pred             HHHHhhcccccccccceeEEEEeccEEeCcccc----cccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHH
Confidence            99988765   2  2489999999999999843    3455566666666566666888889999999999999987654


Q ss_pred             ---cC---C---CccEEecCCCccc-HHHHHHHHHHhhcccCc
Q 022414          260 ---GE---N---TGPINIGNPGEFT-MLELAENVKEVNFYLGR  292 (297)
Q Consensus       260 ---~~---~---~~~~~i~~~~~~s-~~e~~~~i~~~~g~~~~  292 (297)
                         .+   .   ++.|++.+++++. +.||...+.+.+|.+.+
T Consensus       231 ~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~  273 (280)
T PF01073_consen  231 ALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPP  273 (280)
T ss_pred             HhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCC
Confidence               23   1   5689999999998 99999999999999853

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=7.5e-35  Score=237.77  Aligned_cols=225  Identities=36%  Similarity=0.567  Sum_probs=191.6

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-------CCcCEEEEccCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLACP  107 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~~a~~  107 (297)
                      |||||||||||++++++|+++| ++|+.+.|...........    .++.++.+|+.+...       .++|+|||+|+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKG-HEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT-TEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcC-Ccccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeecc
Confidence            7999999999999999999999 8888888864332211111    278999999997632       157999999987


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      ........+....+..|+.++.+++++|++.++ ++|++||..+|+.....+.+|+     .+..|.+.|+.+|...|+.
T Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~-----~~~~~~~~Y~~~K~~~e~~  150 (236)
T PF01370_consen   76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDED-----SPINPLSPYGASKRAAEEL  150 (236)
T ss_dssp             SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETT-----SGCCHSSHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccccccccccccc
Confidence            543334467888899999999999999999999 9999999999998866777777     5667888899999999999


Q ss_pred             HHHHHHHhCCcEEEEeeccccCCC-CCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--C
Q 022414          187 MFDYHRQHGIEIRIARIFNTYGPR-MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (297)
Q Consensus       187 ~~~~~~~~~~~~~ivrp~~v~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~  263 (297)
                      ++.+.++++++++++||+.+|||. .......++..++..+..++++.+++++++.++++|++|+|++++.+++++.  +
T Consensus       151 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  230 (236)
T PF01370_consen  151 LRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAG  230 (236)
T ss_dssp             HHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTT
T ss_pred             ccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCC
Confidence            999998889999999999999999 2223356889999999999999999999999999999999999999999998  7


Q ss_pred             ccEEec
Q 022414          264 GPINIG  269 (297)
Q Consensus       264 ~~~~i~  269 (297)
                      +.||++
T Consensus       231 ~~yNig  236 (236)
T PF01370_consen  231 GIYNIG  236 (236)
T ss_dssp             EEEEES
T ss_pred             CEEEeC
Confidence            899985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.5e-34  Score=232.97  Aligned_cols=225  Identities=28%  Similarity=0.325  Sum_probs=198.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-------cCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-------~~~~d~vi~~a  105 (297)
                      |+|||||++|++|.+|++.|. .+ ++|++++|..                    .|+++..       ..++|+|||+|
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~-~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GE-FEVIATDRAE--------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CC-ceEEeccCcc--------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            569999999999999999998 55 9999998842                    4555542       23699999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      +.+.....+.+++..+.+|..++.+++++|++.|.++||+||.+||....+.++.|+     +++.|.+.||.||.+.|.
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~-----D~~~P~nvYG~sKl~GE~  133 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKET-----DTPNPLNVYGRSKLAGEE  133 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCC-----CCCCChhhhhHHHHHHHH
Confidence            999999999999999999999999999999999999999999999988888889998     788999999999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-Cc
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TG  264 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~  264 (297)
                      .++.+    +-+..|+|.+++||...    .+|+..+++....++.+.+.  .++..+++++.|+|+++..+++... .|
T Consensus       134 ~v~~~----~~~~~I~Rtswv~g~~g----~nFv~tml~la~~~~~l~vv--~Dq~gsPt~~~dlA~~i~~ll~~~~~~~  203 (281)
T COG1091         134 AVRAA----GPRHLILRTSWVYGEYG----NNFVKTMLRLAKEGKELKVV--DDQYGSPTYTEDLADAILELLEKEKEGG  203 (281)
T ss_pred             HHHHh----CCCEEEEEeeeeecCCC----CCHHHHHHHHhhcCCceEEE--CCeeeCCccHHHHHHHHHHHHhccccCc
Confidence            98764    45689999999999863    57999999988999888764  4788899999999999999999886 56


Q ss_pred             cEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          265 PINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       265 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +||+++....||.||++.|.+.++.+..++
T Consensus       204 ~yH~~~~g~~Swydfa~~I~~~~~~~~~v~  233 (281)
T COG1091         204 VYHLVNSGECSWYEFAKAIFEEAGVDGEVI  233 (281)
T ss_pred             EEEEeCCCcccHHHHHHHHHHHhCCCcccc
Confidence            999999989999999999999999776443

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=5.3e-34  Score=242.85  Aligned_cols=251  Identities=32%  Similarity=0.476  Sum_probs=203.2

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecCCCC-CccchhhhcCCCceEEEecccCCcc-----cC--CcCEEEEc
Q 022414           34 RILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTG-SKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIYHL  104 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi~~  104 (297)
                      +|+||||||+||+++++.|++.| .++|++++|.... ..+.+.......++.++.+|+++..     ..  ++|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            58999999999999999999986 3688888764321 2222222222246788899998863     22  38999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC--CeEEEEecceeecCCCCC-CCCCCCCCCCCCCCCCChHHHhHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTSEVYGDPLVH-PQDESYWGNVNPIGVRSCYDEGKR  181 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~r~v~~Ss~~~~~~~~~~-~~~e~~~~~~~~~~~~~~Y~~sK~  181 (297)
                      |+.........++...+++|+.++.+++++|++.+  +++|++||..+|+..... +.+|+     .+..|.+.|+.+|.
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~-----~~~~~~~~Y~~sK~  155 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTET-----TPLAPSSPYSASKA  155 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCC-----CCCCCCCchHHHHH
Confidence            98765444456677889999999999999999864  489999999999865433 45665     45667788999999


Q ss_pred             HHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       182 ~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      .+|.+++.++.+.+++++++||+.+|||....  ..+++.++..+..+..+.+++++++.++++|++|+|+++..++++.
T Consensus       156 ~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~  233 (317)
T TIGR01181       156 ASDHLVRAYHRTYGLPALITRCSNNYGPYQFP--EKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG  233 (317)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeccccCCCCCc--ccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC
Confidence            99999999888889999999999999997543  3577788888888888888888999999999999999999999876


Q ss_pred             C-CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          262 N-TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       262 ~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      . ++.||+++++.+++.|+++.+.+.+|.+.
T Consensus       234 ~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~  264 (317)
T TIGR01181       234 RVGETYNIGGGNERTNLEVVETILELLGKDE  264 (317)
T ss_pred             CCCceEEeCCCCceeHHHHHHHHHHHhCCCc
Confidence            5 56999999999999999999999999653

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=2.5e-34  Score=234.94  Aligned_cols=254  Identities=22%  Similarity=0.275  Sum_probs=196.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc--chhhhcC-CCceEEEecccCCc-----ccCCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD--NLRKWIG-HPRFELIRHDVTEP-----LLIEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~Dl~~~-----~~~~~d~vi  102 (297)
                      .+|+|+|||||||||++|++.|+++| |+|+++.|+......  .+.++-. ..++..+.+|+++.     +..++|.||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rG-Y~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf   83 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRG-YTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF   83 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCC-CEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence            57999999999999999999999999 999999998765322  2333322 33588999999987     456899999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCC-----CCCCCCCCCCCCCCCC-CCCC
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDP-----LVHPQDESYWGNVNPI-GVRS  174 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~-----~~~~~~e~~~~~~~~~-~~~~  174 (297)
                      |+|.+....... ...+.+.+.+.++.+++++|++.. + |+|++||.++...+     ....++|+.|...+-. ....
T Consensus        84 H~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~  162 (327)
T KOG1502|consen   84 HTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKL  162 (327)
T ss_pred             EeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHH
Confidence            999876653333 455789999999999999999998 6 89999998875432     2346777777543321 1226


Q ss_pred             hHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      .|..+|..+|+..++++++.+++.+.+.|+.|+||...+.. +.....+.+...|....   ..+....++|++|||++.
T Consensus       163 ~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l-~~s~~~~l~~i~G~~~~---~~n~~~~~VdVrDVA~AH  238 (327)
T KOG1502|consen  163 WYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSL-NSSLNALLKLIKGLAET---YPNFWLAFVDVRDVALAH  238 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccccc-chhHHHHHHHHhccccc---CCCCceeeEeHHHHHHHH
Confidence            89999999999999999999999999999999999987642 23334444555554322   224445699999999999


Q ss_pred             HHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          255 IRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       255 ~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +.+++++. .|.|.+.+ +..++.|+++.+.+.+..-.
T Consensus       239 v~a~E~~~a~GRyic~~-~~~~~~ei~~~l~~~~P~~~  275 (327)
T KOG1502|consen  239 VLALEKPSAKGRYICVG-EVVSIKEIADILRELFPDYP  275 (327)
T ss_pred             HHHHcCcccCceEEEec-CcccHHHHHHHHHHhCCCCC
Confidence            99999999 66776666 56679999999999887543

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=2.6e-33  Score=241.97  Aligned_cols=259  Identities=25%  Similarity=0.367  Sum_probs=199.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc---chhhhc--CCCceEEEecccCCccc-------C
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKWI--GHPRFELIRHDVTEPLL-------I   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---~~~~~~--~~~~~~~~~~Dl~~~~~-------~   96 (297)
                      ++++|+|+|||||||+|+++++.|+++| ++|++++|.......   .+....  ...++.++.+|+.+...       .
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAG-YKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            4457899999999999999999999999 999999875432211   111111  12357889999987631       2


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      ++|.|||+|+.........++...++.|+.++.+++++|++.++ +||++||..+|+.....+++|+     .+..+.+.
T Consensus        81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~~~~~~  155 (352)
T PLN02240         81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-----FPLSATNP  155 (352)
T ss_pred             CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCCCCCCH
Confidence            68999999987654444567778899999999999999999987 8999999999987666677787     56777789


Q ss_pred             HHHhHHHHHHHHHHHHHH-hCCcEEEEeeccccCCCCCC------C--ChhHHHHHHHHHHcCC--CeEEec------CC
Q 022414          176 YDEGKRVAETLMFDYHRQ-HGIEIRIARIFNTYGPRMNI------D--DGRVVSNFIAQAIRGE--PLTVQA------PG  238 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~-~~~~~~ivrp~~v~G~~~~~------~--~~~~~~~~~~~~~~~~--~~~~~~------~~  238 (297)
                      |+.+|.++|++++.+... .+++++++|++.+||++...      .  ...++. ++..+..++  .+.+++      ++
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g  234 (352)
T PLN02240        156 YGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMP-YVQQVAVGRRPELTVFGNDYPTKDG  234 (352)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHH-HHHHHHhCCCCceEEeCCCCCCCCC
Confidence            999999999999988654 47889999999999975321      0  112333 344444443  345554      67


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcC----C--CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGE----N--TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~----~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      .+.++++|++|+|++++.++++.    .  ++.||+++++++|++|+++.+.+.+|.+.++.
T Consensus       235 ~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~  296 (352)
T PLN02240        235 TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLK  296 (352)
T ss_pred             CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCce
Confidence            88999999999999998887642    2  46999999999999999999999999765543

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=8.2e-33  Score=237.61  Aligned_cols=254  Identities=26%  Similarity=0.403  Sum_probs=192.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh--cCCCceEEEecccCCccc-------CCcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPLL-------IEVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~-------~~~d~vi~  103 (297)
                      |+|+|||||||||+++++.|+++| ++|++++|........+...  ....++.++.+|+++...       .++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            689999999999999999999999 99999876533222211111  112356778899987631       25899999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC-CCCChHHHhHH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI-GVRSCYDEGKR  181 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~-~~~~~Y~~sK~  181 (297)
                      +|+..........+.+.++.|+.++.+++++|++.++ +||++||..+|+.....+++|+     ++. .|.+.|+.+|.
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~-----~~~~~p~~~Y~~sK~  154 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVES-----FPTGTPQSPYGKSKL  154 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccc-----cCCCCCCChhHHHHH
Confidence            9987654334455677889999999999999999998 8999999999987655667776     343 56788999999


Q ss_pred             HHHHHHHHHHHHh-CCcEEEEeeccccCCCCC----CC----ChhHHHHHHHHHHcCC--CeEEec------CCceeEee
Q 022414          182 VAETLMFDYHRQH-GIEIRIARIFNTYGPRMN----ID----DGRVVSNFIAQAIRGE--PLTVQA------PGTQTRSF  244 (297)
Q Consensus       182 ~~e~~~~~~~~~~-~~~~~ivrp~~v~G~~~~----~~----~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~  244 (297)
                      ++|++++.+++.. +++++++|++.+||+...    +.    ...++.. +..+..+.  .+.+++      ++.+.+++
T Consensus       155 ~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  233 (338)
T PRK10675        155 MVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPY-IAQVAVGRRDSLAIFGNDYPTEDGTGVRDY  233 (338)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHH-HHHHHhcCCCceEEeCCcCCCCCCcEEEee
Confidence            9999999987653 789999999999997421    11    1223333 33344332  344544      57788999


Q ss_pred             eeHHHHHHHHHHHHhcC---C-CccEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          245 CYVSDMVDGLIRLMEGE---N-TGPINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~---~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      +|++|+|++++.+++..   . +++||+++++.+|+.|+++.+.+.+|.+.++
T Consensus       234 v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  286 (338)
T PRK10675        234 IHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNY  286 (338)
T ss_pred             EEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCe
Confidence            99999999999988752   2 4689999999999999999999999976543

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=3.4e-33  Score=238.63  Aligned_cols=252  Identities=20%  Similarity=0.269  Sum_probs=189.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---C-CCceEEEecccCCcc-----cCCcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---G-HPRFELIRHDVTEPL-----LIEVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~-~~~~~~~~~Dl~~~~-----~~~~d~  100 (297)
                      ..+|+|+||||+||||+++++.|+++| ++|+++.|+...... .....   . ..++.++.+|+++..     ..++|+
T Consensus         3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   80 (325)
T PLN02989          3 DGGKVVCVTGASGYIASWIVKLLLFRG-YTINATVRDPKDRKK-TDHLLALDGAKERLKLFKADLLDEGSFELAIDGCET   80 (325)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEEcCCcchhh-HHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCE
Confidence            346999999999999999999999999 999988886543221 11111   1 136888999999863     346999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-CC-eEEEEecceeecCCC-----CCCCCCCCCCCCCC-CCC
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGDPL-----VHPQDESYWGNVNP-IGV  172 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~~~~~~~~-----~~~~~e~~~~~~~~-~~~  172 (297)
                      |||+||.........++...+++|+.++.+++++|.+. ++ +||++||..+|+...     ..+++|+.+..... ..+
T Consensus        81 vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~  160 (325)
T PLN02989         81 VFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEER  160 (325)
T ss_pred             EEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccc
Confidence            99999965432333456778899999999999999885 45 899999988765432     23466664332111 112


Q ss_pred             CChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHH
Q 022414          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      .+.|+.+|.++|+.++.+.++++++++++||+++|||+..+.. ++...++..+..++...  +  .+.++|+|++|+|+
T Consensus       161 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~-~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~  235 (325)
T PLN02989        161 KQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTL-NFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVAL  235 (325)
T ss_pred             ccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCC-CchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHH
Confidence            4679999999999999998888999999999999999865432 24445555555555432  2  34578999999999


Q ss_pred             HHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          253 GLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       253 ~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      +++.+++++. ++.||++ ++.+|+.|+++.+.+.++.
T Consensus       236 a~~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~  272 (325)
T PLN02989        236 AHVKALETPSANGRYIID-GPVVTIKDIENVLREFFPD  272 (325)
T ss_pred             HHHHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCC
Confidence            9999998765 6799995 5689999999999999973

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.5e-33  Score=235.48  Aligned_cols=249  Identities=39%  Similarity=0.530  Sum_probs=199.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCc-CEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEV-DQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~-d~vi~~a~  106 (297)
                      |+|||||||||||++|++.|+++| ++|++++|.........      ..+.++.+|+++..     ..+. |+|||+|+
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa   73 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAG-HDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAA   73 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCC-CeEEEEeCCCccccccc------cccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence            459999999999999999999999 99999999654433221      35778888877752     2234 99999999


Q ss_pred             CCCCccccc-ChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCC-CCCCCCCCCCCCCCCCCCCChHHHhHHHH
Q 022414          107 PASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDP-LVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (297)
Q Consensus       107 ~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~-~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (297)
                      ......... ++.+.+..|+.++.+++++|++.++ ++||.||.++++.. ...+.+|+.    .+..|.+.|+.+|.++
T Consensus        74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~----~~~~p~~~Yg~sK~~~  149 (314)
T COG0451          74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL----GPPRPLNPYGVSKLAA  149 (314)
T ss_pred             cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc----CCCCCCCHHHHHHHHH
Confidence            776443333 4567899999999999999999888 89998887877655 233566653    2455555899999999


Q ss_pred             HHHHHHHHHHhCCcEEEEeeccccCCCCCCCCh-hHHHHHHHHHHcCCC-eEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG-RVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       184 e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      |+.+..+....+++++++||+.+|||+...... .+...++.....+.+ ....+++...++++|++|++++++.+++++
T Consensus       150 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  229 (314)
T COG0451         150 EQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENP  229 (314)
T ss_pred             HHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCC
Confidence            999999988778999999999999999765422 355555666676765 566677888899999999999999999998


Q ss_pred             CCccEEecCCC-cccHHHHHHHHHHhhcccCc
Q 022414          262 NTGPINIGNPG-EFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       262 ~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~  292 (297)
                      ..+.||++++. .+++.|+++.+.+.+|....
T Consensus       230 ~~~~~ni~~~~~~~~~~e~~~~~~~~~~~~~~  261 (314)
T COG0451         230 DGGVFNIGSGTAEITVRELAEAVAEAVGSKAP  261 (314)
T ss_pred             CCcEEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence            75599999987 89999999999999998754

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3.9e-33  Score=240.62  Aligned_cols=259  Identities=22%  Similarity=0.260  Sum_probs=183.3

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEE
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIY  102 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi  102 (297)
                      -.+.+|+||||||+||||++++++|+++| ++|++++|+...............+++++.+|+.+..     ..++|+||
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRG-YTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF   84 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence            34567999999999999999999999999 9999998864322221111112246888999998762     34699999


Q ss_pred             EccCCCCCcc--cccChhh-----hHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCCC-----CCCCCCCCCCCC
Q 022414          103 HLACPASPIF--YKYNPVK-----TIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLV-----HPQDESYWGNVN  168 (297)
Q Consensus       103 ~~a~~~~~~~--~~~~~~~-----~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~~-----~~~~e~~~~~~~  168 (297)
                      |+|+......  ...++..     .++.|+.++.+++++|++.+ + +||++||.++|+....     .+++|+.+...+
T Consensus        85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~  164 (353)
T PLN02896         85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPID  164 (353)
T ss_pred             ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHH
Confidence            9999765432  2233443     34455689999999998875 6 8999999999985321     345555322111


Q ss_pred             ----CCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCe--EEecC---Cc
Q 022414          169 ----PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL--TVQAP---GT  239 (297)
Q Consensus       169 ----~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~  239 (297)
                          +..+.+.|+.+|.++|++++.+.++++++++++||+++|||+....-..++..++.. ..+...  ...+.   ..
T Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~  243 (353)
T PLN02896        165 HVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSP-ITGDSKLFSILSAVNSRM  243 (353)
T ss_pred             HhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHH-hcCCcccccccccccccc
Confidence                223446899999999999999998889999999999999998643222233333322 233221  11111   11


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      ..++|+|++|+|++++.+++.+. .+.|+ ++++.+++.|+++.+.+.++.
T Consensus       244 ~~~dfi~v~Dva~a~~~~l~~~~~~~~~~-~~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        244 GSIALVHIEDICDAHIFLMEQTKAEGRYI-CCVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             CceeEEeHHHHHHHHHHHHhCCCcCccEE-ecCCCCCHHHHHHHHHHhCCC
Confidence            23699999999999999998765 56775 456889999999999999874

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=4.3e-33  Score=236.14  Aligned_cols=237  Identities=26%  Similarity=0.316  Sum_probs=184.1

Q ss_pred             EEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-------cCCcCEEEEccCCC
Q 022414           36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIYHLACPA  108 (297)
Q Consensus        36 lItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-------~~~~d~vi~~a~~~  108 (297)
                      ||||||||||++|++.|++.| ++|+++.+..                   .+|+++..       ..++|+|||+|+..
T Consensus         1 lItGa~GfiG~~l~~~L~~~g-~~v~~~~~~~-------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~   60 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALG-FTNLVLRTHK-------------------ELDLTRQADVEAFFAKEKPTYVILAAAKV   60 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCC-CcEEEeeccc-------------------cCCCCCHHHHHHHHhccCCCEEEEeeeee
Confidence            699999999999999999999 7766554321                   24555431       23589999999875


Q ss_pred             CC-cccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC-hHHHhHHHHHH
Q 022414          109 SP-IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS-CYDEGKRVAET  185 (297)
Q Consensus       109 ~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~-~Y~~sK~~~e~  185 (297)
                      .. .....++.+.++.|+.++.+++++|++.++ ++|++||..+|+.....+++|+.+.. .+..|.+ .|+.+|.++|+
T Consensus        61 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK~~~e~  139 (306)
T PLN02725         61 GGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLT-GPPEPTNEWYAIAKIAGIK  139 (306)
T ss_pred             cccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhcc-CCCCCCcchHHHHHHHHHH
Confidence            42 123356677889999999999999999998 89999999999976666777775432 1333433 59999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCC--ChhHHHHHHH----HHHcCCCeEE-ecCCceeEeeeeHHHHHHHHHHHH
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIA----QAIRGEPLTV-QAPGTQTRSFCYVSDMVDGLIRLM  258 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~--~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~~  258 (297)
                      .++.+.+..+++++++||+.+|||+....  ...+++.++.    ....+.++.+ ++++++.++++|++|++++++.++
T Consensus       140 ~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~  219 (306)
T PLN02725        140 MCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLM  219 (306)
T ss_pred             HHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHH
Confidence            99988888899999999999999985321  1233444443    3344555554 678899999999999999999999


Q ss_pred             hcCC-CccEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          259 EGEN-TGPINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       259 ~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      ++.. .+.||+++++.+++.|+++.+.+.+|.+..+
T Consensus       220 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~  255 (306)
T PLN02725        220 RRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGEL  255 (306)
T ss_pred             hccccCcceEeCCCCcccHHHHHHHHHHHhCCCCce
Confidence            8754 6789999999999999999999999876544

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=7.1e-33  Score=237.78  Aligned_cols=253  Identities=22%  Similarity=0.276  Sum_probs=185.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc--hhhhcCCCceEEEecccCCcc-----cCCcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN--LRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~  104 (297)
                      +|+|+||||+||||++|++.|+++| ++|+++.|+.......  +..+....+++++.+|+++..     ..++|+|||+
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   87 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKG-YAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHV   87 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCC-CEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence            6899999999999999999999999 8999888865322110  111111135888999998763     3479999999


Q ss_pred             cCCCCCcccccCh-hhhHHHhHHHHHHHHHHHHHc-CC-eEEEEecceeecCCC----CCCCCCCCCCCC----CCCCCC
Q 022414          105 ACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGDPL----VHPQDESYWGNV----NPIGVR  173 (297)
Q Consensus       105 a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~~~~~~~~----~~~~~e~~~~~~----~~~~~~  173 (297)
                      |+....  ...++ ...+++|+.++.+++++|.+. ++ +||++||..+|+...    ..+.+|+.|...    .+..|.
T Consensus        88 A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~  165 (338)
T PLN00198         88 ATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPT  165 (338)
T ss_pred             CCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCcc
Confidence            986421  22233 346789999999999999886 46 899999999998532    234555543211    123466


Q ss_pred             ChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEec-CCc----eeEeeeeHH
Q 022414          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA-PGT----QTRSFCYVS  248 (297)
Q Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~v~  248 (297)
                      ++|+.+|.++|.+++.+.++.+++++++||+.+|||+.......++. ++.....++.+.+.+ .+.    +.++++|++
T Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~  244 (338)
T PLN00198        166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISITHVE  244 (338)
T ss_pred             chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcceeEHH
Confidence            78999999999999999888899999999999999985432222222 233455565554433 222    237999999


Q ss_pred             HHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          249 DMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       249 Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      |+|++++.+++.+. .+.| +++++.+++.|+++.+.+.++.
T Consensus       245 D~a~a~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~~~  285 (338)
T PLN00198        245 DVCRAHIFLAEKESASGRY-ICCAANTSVPELAKFLIKRYPQ  285 (338)
T ss_pred             HHHHHHHHHhhCcCcCCcE-EEecCCCCHHHHHHHHHHHCCC
Confidence            99999999998865 5677 5666789999999999988763

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=7e-33  Score=236.33  Aligned_cols=250  Identities=21%  Similarity=0.310  Sum_probs=187.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc----CCCceEEEecccCCcc-----cCCcCEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPL-----LIEVDQI  101 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~-----~~~~d~v  101 (297)
                      .+++|+|||||||||++++++|+++| ++|+++.|+..... ......    ....++++.+|+++..     ..++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   81 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRG-YTVKATVRDLTDRK-KTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAV   81 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCCcchH-HHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEE
Confidence            46899999999999999999999999 99999888654322 111111    1246889999998763     3479999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-CC-eEEEEecceee--cCC---CCCCCCCCCCCCCC-CCCCC
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVY--GDP---LVHPQDESYWGNVN-PIGVR  173 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~~~~--~~~---~~~~~~e~~~~~~~-~~~~~  173 (297)
                      ||+|+..... ......+.+++|+.++.+++++|++. ++ |||++||.+++  +..   ....++|+.|.... +..+.
T Consensus        82 ih~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  160 (322)
T PLN02986         82 FHTASPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK  160 (322)
T ss_pred             EEeCCCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccc
Confidence            9999864321 12223456899999999999999986 67 89999998764  332   12346676553211 11245


Q ss_pred             ChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHH
Q 022414          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                      +.|+.+|.++|..++.+.++++++++++||+++|||...+. .++...++..+..++.+  ++  .+.++++|++|+|++
T Consensus       161 ~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~-~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a  235 (322)
T PLN02986        161 NWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPT-LNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALA  235 (322)
T ss_pred             cchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCC-CCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHH
Confidence            78999999999999999888899999999999999986442 12233455555555543  22  456799999999999


Q ss_pred             HHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       254 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      ++.+++++. ++.||++ ++.+++.|+++.+.+.++.
T Consensus       236 ~~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~  271 (322)
T PLN02986        236 HIKALETPSANGRYIID-GPIMSVNDIIDILRELFPD  271 (322)
T ss_pred             HHHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCC
Confidence            999999876 6789995 5789999999999999874

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2e-33  Score=220.67  Aligned_cols=251  Identities=28%  Similarity=0.442  Sum_probs=215.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecCCCCC-ccchhhhcCCCceEEEecccCCccc-------CCcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGS-KDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~  103 (297)
                      ++++||||.||||++.+..+.+.- .+..+.++.-.-.. ...+.+....++..++++|+.+...       .++|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            899999999999999999998873 25555555433211 2233444456789999999988632       36999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCCCC-CCCCCCCCCCCCCChHHHhH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQD-ESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~-e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      .|+.+.......++.+....|+.++..++++++..|.  +|||+||..|||++...... |.     +.+.|.++|.++|
T Consensus        87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~-----s~~nPtnpyAasK  161 (331)
T KOG0747|consen   87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEA-----SLLNPTNPYAASK  161 (331)
T ss_pred             hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccccc-----ccCCCCCchHHHH
Confidence            9998887777888888999999999999999999964  79999999999998776655 55     7888899999999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhc
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                      +++|+.++++..+++++++++|..+||||+..+  -..++.++.....+++.++.|+|.+.++++|++|+++++..++++
T Consensus       162 aAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~--~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K  239 (331)
T KOG0747|consen  162 AAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYP--EKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK  239 (331)
T ss_pred             HHHHHHHHHHhhccCCcEEEEeccCccCCCcCh--HHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999765  357788888778899999999999999999999999999999999


Q ss_pred             CC-CccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          261 EN-TGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       261 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      ++ +.+|||++.++.+..|+++.+.+.++..
T Consensus       240 g~~geIYNIgtd~e~~~~~l~k~i~eli~~~  270 (331)
T KOG0747|consen  240 GELGEIYNIGTDDEMRVIDLAKDICELFEKR  270 (331)
T ss_pred             CCccceeeccCcchhhHHHHHHHHHHHHHHh
Confidence            88 8899999999999999999999988773

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=1e-32  Score=231.73  Aligned_cols=224  Identities=26%  Similarity=0.321  Sum_probs=183.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----c--CCcCEEEEccC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----L--IEVDQIYHLAC  106 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~--~~~d~vi~~a~  106 (297)
                      ||+|||||||||+++++.|+++| ++|++++|.                    .+|+.+..     +  .++|+|||+|+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g-~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~   59 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEG-RVVVALTSS--------------------QLDLTDPEALERLLRAIRPDAVVNTAA   59 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcC-CEEEEeCCc--------------------ccCCCCHHHHHHHHHhCCCCEEEECCc
Confidence            58999999999999999999999 999999884                    13333321     1  24799999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      ..........+...++.|+.++.+++++|++.+.++|++||.++|+.....+++|+     ++..|.+.|+.+|..+|+.
T Consensus        60 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~-----~~~~~~~~Y~~~K~~~E~~  134 (287)
T TIGR01214        60 YTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYRED-----DATNPLNVYGQSKLAGEQA  134 (287)
T ss_pred             cccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCC-----CCCCCcchhhHHHHHHHHH
Confidence            76543334456778899999999999999998889999999999987656677777     4556778899999999999


Q ss_pred             HHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC--CCc
Q 022414          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE--NTG  264 (297)
Q Consensus       187 ~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~~~  264 (297)
                      ++.+    +.+++++||+.+||++..   ..++..++..+..+..+.+.+  +..++++|++|+|+++..+++.+  .++
T Consensus       135 ~~~~----~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~  205 (287)
T TIGR01214       135 IRAA----GPNALIVRTSWLYGGGGG---RNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARG  205 (287)
T ss_pred             HHHh----CCCeEEEEeeecccCCCC---CCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCC
Confidence            8764    678999999999999832   346666777777776666544  45689999999999999999886  378


Q ss_pred             cEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          265 PINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       265 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      +||+++++.+++.|+++.+.+.+|.+..
T Consensus       206 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~  233 (287)
T TIGR01214       206 VYHLANSGQCSWYEFAQAIFEEAGADGL  233 (287)
T ss_pred             eEEEECCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999998753

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.7e-32  Score=234.05  Aligned_cols=250  Identities=20%  Similarity=0.258  Sum_probs=184.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc--hhhhc-CCCceEEEecccCCcc-----cCCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN--LRKWI-GHPRFELIRHDVTEPL-----LIEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~--~~~~~-~~~~~~~~~~Dl~~~~-----~~~~d~vi  102 (297)
                      .+|+|||||||||||+++++.|+++| ++|+++.|+.......  +.... ...+++++.+|+++..     +.++|+||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRG-YTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCC-CEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence            36899999999999999999999999 9999999864332111  11111 1246889999998763     35799999


Q ss_pred             EccCCCCCcccccCh-hhhHHHhHHHHHHHHHHHHHc-CC-eEEEEeccee--ecCCC---CCCCCCCCCCCCC-CCCCC
Q 022414          103 HLACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEV--YGDPL---VHPQDESYWGNVN-PIGVR  173 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~~~--~~~~~---~~~~~e~~~~~~~-~~~~~  173 (297)
                      |+|+....  ...++ ...+++|+.++.+++++|++. ++ |||++||.++  |+...   ..+++|+.+.... +....
T Consensus        82 h~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~  159 (322)
T PLN02662         82 HTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESK  159 (322)
T ss_pred             EeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhccc
Confidence            99986532  22334 367899999999999999987 77 8999999763  64321   2345555321110 01123


Q ss_pred             ChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHH
Q 022414          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                      +.|+.+|..+|+.++.+.++.+++++++||+.+|||...+.. ......+..+..++..    .+++.++++|++|+|++
T Consensus       160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~i~v~Dva~a  234 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTL-NTSAEAILNLINGAQT----FPNASYRWVDVRDVANA  234 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCC-CchHHHHHHHhcCCcc----CCCCCcCeEEHHHHHHH
Confidence            579999999999999988888999999999999999854321 2333444555555432    23467899999999999


Q ss_pred             HHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       254 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      ++.+++++. .|.|+++ ++.+++.|+++.+.+.++.
T Consensus       235 ~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        235 HIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPT  270 (322)
T ss_pred             HHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCC
Confidence            999999865 6789987 5789999999999998774

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=4.5e-32  Score=230.71  Aligned_cols=244  Identities=25%  Similarity=0.308  Sum_probs=188.2

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc---------cCCcCEEEEcc
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL---------LIEVDQIYHLA  105 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---------~~~~d~vi~~a  105 (297)
                      |||||||||||+++++.|.++|.++|++++|.....  .+...    ....+..|+.+..         ..++|+|||+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A   74 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNL----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG   74 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhh----hheeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence            699999999999999999999933788887754221  11111    1123445555431         14799999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      +....  ...++...+++|+.++.+++++|++.+++||++||.++|+... .+.+|+.    .+..|.+.|+.+|..+|.
T Consensus        75 ~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~-~~~~e~~----~~~~p~~~Y~~sK~~~e~  147 (314)
T TIGR02197        75 ACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGE-AGFREGR----ELERPLNVYGYSKFLFDQ  147 (314)
T ss_pred             cccCc--cccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCC-CCccccc----CcCCCCCHHHHHHHHHHH
Confidence            86542  3456777889999999999999999988999999999998753 3444542    233467889999999999


Q ss_pred             HHHHHHH--HhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEe------cCCceeEeeeeHHHHHHHHH
Q 022414          186 LMFDYHR--QHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQ------APGTQTRSFCYVSDMVDGLI  255 (297)
Q Consensus       186 ~~~~~~~--~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~v~Dva~~~~  255 (297)
                      .++++..  ..+++++++||+.+|||+.....  ..++..++..+..++.+.++      +++++.++++|++|++++++
T Consensus       148 ~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~  227 (314)
T TIGR02197       148 YVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNL  227 (314)
T ss_pred             HHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHH
Confidence            9987543  23578999999999999864321  24566777777777776654      45778899999999999999


Q ss_pred             HHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          256 RLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       256 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      .++.....++||+++++++|+.|+++.+.+.+|.+.
T Consensus       228 ~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~  263 (314)
T TIGR02197       228 WLLENGVSGIFNLGTGRARSFNDLADAVFKALGKDE  263 (314)
T ss_pred             HHHhcccCceEEcCCCCCccHHHHHHHHHHHhCCCC
Confidence            999885578999999999999999999999999764

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=1e-31  Score=229.75  Aligned_cols=255  Identities=29%  Similarity=0.448  Sum_probs=196.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-------CCcCEEEEccC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLAC  106 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~~a~  106 (297)
                      ||+||||||+||+++++.|+++| ++|++++|......+.+.......++.++.+|+++...       .++|+|||+||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag   79 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESG-HEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAG   79 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCC-CeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECcc
Confidence            58999999999999999999999 89988876443322222221111257788899987632       26999999999


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      .........++.+.+..|+.++.+++++|.+.++ ++|++||.++|+.....+++|+     ++..|...|+.+|..+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~-----~~~~~~~~y~~sK~~~e~  154 (328)
T TIGR01179        80 LIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISED-----SPLGPINPYGRSKLMSER  154 (328)
T ss_pred             ccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCcccc-----CCCCCCCchHHHHHHHHH
Confidence            7654444456677889999999999999999987 8999999999987655567777     456677889999999999


Q ss_pred             HHHHHHHH-hCCcEEEEeeccccCCCCCCC-------ChhHHHHHHHHHH-cCCCeEEec------CCceeEeeeeHHHH
Q 022414          186 LMFDYHRQ-HGIEIRIARIFNTYGPRMNID-------DGRVVSNFIAQAI-RGEPLTVQA------PGTQTRSFCYVSDM  250 (297)
Q Consensus       186 ~~~~~~~~-~~~~~~ivrp~~v~G~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~v~Dv  250 (297)
                      .++.++.+ .+++++++||+.+||+.....       ...++..+..... ....+.+++      +++..++++|++|+
T Consensus       155 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~  234 (328)
T TIGR01179       155 ILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDL  234 (328)
T ss_pred             HHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHH
Confidence            99998776 789999999999999864221       1234444444433 233444433      46778899999999


Q ss_pred             HHHHHHHHhcC----CCccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          251 VDGLIRLMEGE----NTGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       251 a~~~~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      |++++.++...    .++.||+++++++|+.|+++.+.+.+|.+..+.
T Consensus       235 a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~  282 (328)
T TIGR01179       235 ADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVE  282 (328)
T ss_pred             HHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceE
Confidence            99999998752    267999999999999999999999999876543

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=1e-31  Score=231.68  Aligned_cols=251  Identities=22%  Similarity=0.303  Sum_probs=180.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC----CCceEEEecccCCcc-----cCCcCEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPL-----LIEVDQI  101 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~-----~~~~d~v  101 (297)
                      ..|+||||||+||||+++++.|+++| ++|+++.|+..... .+.....    ...+.++.+|+++..     ..++|+|
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~V   81 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERG-YTVRATVRDPANVK-KVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGV   81 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCC-CEEEEEEcCcchhH-HHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEE
Confidence            46899999999999999999999999 99999988643221 1111111    125788999998753     3479999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCC-CCC-CCCCCCCCCC----CCCCC
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPL-VHP-QDESYWGNVN----PIGVR  173 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~-~~~-~~e~~~~~~~----~~~~~  173 (297)
                      ||+|+..... ........+++|+.++.+++++|++.+ + ||||+||..+|+... ..+ ++|+.+...+    +..+.
T Consensus        82 iH~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  160 (351)
T PLN02650         82 FHVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTG  160 (351)
T ss_pred             EEeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccccc
Confidence            9999865321 122234678999999999999999987 5 899999997765432 222 4565442211    12344


Q ss_pred             ChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHH
Q 022414          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      +.|+.+|.++|.+++.+.++++++++++||+++|||+..... ..++..+ . ...+.... .+. .+.++++|++|+|+
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~-~-~~~~~~~~-~~~-~~~r~~v~V~Dva~  236 (351)
T PLN02650        161 WMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITAL-S-LITGNEAH-YSI-IKQGQFVHLDDLCN  236 (351)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHH-H-HhcCCccc-cCc-CCCcceeeHHHHHH
Confidence            689999999999999999888999999999999999854321 1122211 1 12232211 122 23479999999999


Q ss_pred             HHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          253 GLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       253 ~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      +++.+++++. .+.| +++++.+++.|+++.+.+.++.
T Consensus       237 a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~  273 (351)
T PLN02650        237 AHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPE  273 (351)
T ss_pred             HHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcc
Confidence            9999998765 5677 6666889999999999998763

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=1.1e-30  Score=222.37  Aligned_cols=233  Identities=24%  Similarity=0.305  Sum_probs=181.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~  104 (297)
                      ++|+|+||||+||||+++++.|+++| .++|++++|+.... ..+.......++.++.+|++|..     ..++|+|||+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~   81 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ-WEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA   81 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence            47999999999999999999999985 26898888864321 11222222246889999999863     3469999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (297)
                      ||.........++.+.+++|+.++.+++++|++.++ +||++||...                   ..|.+.|+.+|.++
T Consensus        82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~-------------------~~p~~~Y~~sK~~~  142 (324)
T TIGR03589        82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA-------------------ANPINLYGATKLAS  142 (324)
T ss_pred             cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC-------------------CCCCCHHHHHHHHH
Confidence            997654334556778899999999999999999998 8999999532                   23346799999999


Q ss_pred             HHHHHHHHH---HhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCC-CeEEecCCceeEeeeeHHHHHHHHHHHHh
Q 022414          184 ETLMFDYHR---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (297)
Q Consensus       184 e~~~~~~~~---~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  259 (297)
                      |++++.+..   ..+++++++||+++|||+.     .+++.+......+. .+++ +++.+.++|+|++|+|++++.+++
T Consensus       143 E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-----~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~  216 (324)
T TIGR03589       143 DKLFVAANNISGSKGTRFSVVRYGNVVGSRG-----SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLE  216 (324)
T ss_pred             HHHHHHHHhhccccCcEEEEEeecceeCCCC-----CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHh
Confidence            999877543   4689999999999999862     35666666666665 4665 467888999999999999999998


Q ss_pred             cCCCccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          260 GENTGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       260 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      +...+..++.++..+++.|+++.+.+..+.
T Consensus       217 ~~~~~~~~~~~~~~~sv~el~~~i~~~~~~  246 (324)
T TIGR03589       217 RMLGGEIFVPKIPSMKITDLAEAMAPECPH  246 (324)
T ss_pred             hCCCCCEEccCCCcEEHHHHHHHHHhhCCe
Confidence            764444346666789999999999997654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=5.6e-31  Score=227.50  Aligned_cols=255  Identities=17%  Similarity=0.168  Sum_probs=185.1

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-------CCCceEEEecccCCcc-----c
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-------GHPRFELIRHDVTEPL-----L   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~-----~   95 (297)
                      ...++|+||||||+||||+++++.|+++| ++|+++.|+.... +.+..+.       ....+.++.+|+++..     .
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G-~~V~~~~r~~~~~-~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHG-YSVRIAVDTQEDK-EKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEeCCHHHH-HHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            44568999999999999999999999999 9999888753221 1111110       0125788899998863     3


Q ss_pred             CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-CC-eEEEEecc--eeecCC--CC--CCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTS--EVYGDP--LV--HPQDESYWGNV  167 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~--~~~~~~--~~--~~~~e~~~~~~  167 (297)
                      .++|.|||+++.................|+.++.+++++|++. ++ ||||+||.  .+|+..  ..  ..++|+.+...
T Consensus       127 ~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~  206 (367)
T PLN02686        127 DGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE  206 (367)
T ss_pred             HhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCCh
Confidence            4799999999876443221222345678999999999999986 67 89999996  467642  11  23556544322


Q ss_pred             -CCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          168 -NPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       168 -~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                       .+..|.+.|+.+|.++|++++.+....+++++++||+++|||+.......   .++ ....+. +.+.+++  .++++|
T Consensus       207 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~---~~~-~~~~g~-~~~~g~g--~~~~v~  279 (367)
T PLN02686        207 SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNST---ATI-AYLKGA-QEMLADG--LLATAD  279 (367)
T ss_pred             hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCCh---hHH-HHhcCC-CccCCCC--CcCeEE
Confidence             23456678999999999999998888899999999999999985322111   122 233443 4444544  357999


Q ss_pred             HHHHHHHHHHHHhcC---C-CccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          247 VSDMVDGLIRLMEGE---N-TGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       247 v~Dva~~~~~~~~~~---~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      ++|+|++++.+++..   . ++.| +++++.+++.|+++.+.+.+|.+..
T Consensus       280 V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~  328 (367)
T PLN02686        280 VERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPIN  328 (367)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC
Confidence            999999999999852   2 4567 8888999999999999999997643

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=8.8e-31  Score=232.97  Aligned_cols=256  Identities=18%  Similarity=0.177  Sum_probs=190.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcC--CCeEEEEecCCCCCcc--chh-hh-----c--------------CCCceEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYFTGSKD--NLR-KW-----I--------------GHPRFEL   85 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~--~~~-~~-----~--------------~~~~~~~   85 (297)
                      ..+|+|+|||||||+|++|++.|++.+  ..+|+++.|.......  .+. .+     +              ...++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            458999999999999999999999864  2478999997653221  111 11     0              0157899


Q ss_pred             EecccCCc------------ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-CC-eEEEEecceee
Q 022414           86 IRHDVTEP------------LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVY  151 (297)
Q Consensus        86 ~~~Dl~~~------------~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~~~~  151 (297)
                      +.+|++++            ...++|+|||+|+....   ..++...+++|+.++.+++++|++. ++ +|||+||.++|
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy  165 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC  165 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence            99999732            12369999999987653   4567888999999999999999986 56 79999999999


Q ss_pred             cCCCCCCCCCCCCCCC--------------------------------------------C---CCCCCChHHHhHHHHH
Q 022414          152 GDPLVHPQDESYWGNV--------------------------------------------N---PIGVRSCYDEGKRVAE  184 (297)
Q Consensus       152 ~~~~~~~~~e~~~~~~--------------------------------------------~---~~~~~~~Y~~sK~~~e  184 (297)
                      |.... .+.|..+...                                            +   ...+.+.|+.+|.++|
T Consensus       166 G~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE  244 (491)
T PLN02996        166 GEKSG-LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGE  244 (491)
T ss_pred             cCCCc-eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHH
Confidence            86432 1222111100                                            0   1112357999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCCCCh-----hHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHh
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG-----RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  259 (297)
                      +++..+.  .+++++++||++|||++..+...     .....++..+..+....+.+++++.++++||+|+|++++.++.
T Consensus       245 ~lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~  322 (491)
T PLN02996        245 MLLGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMA  322 (491)
T ss_pred             HHHHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHH
Confidence            9998764  37999999999999998655321     1223444445566666677999999999999999999999887


Q ss_pred             cC-----CCccEEecCC--CcccHHHHHHHHHHhhcccC
Q 022414          260 GE-----NTGPINIGNP--GEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       260 ~~-----~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~  291 (297)
                      ..     ...+||++++  .++|+.|+++.+.+.++..+
T Consensus       323 ~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p  361 (491)
T PLN02996        323 AHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP  361 (491)
T ss_pred             HhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence            52     2458999998  88999999999999887654

>PLN00016 RNA-binding protein; Provisional

Probab=99.98  E-value=1.6e-30  Score=226.10  Aligned_cols=232  Identities=19%  Similarity=0.252  Sum_probs=181.7

Q ss_pred             cCCCEEEEE----cCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccch----h--hhcCCCceEEEecccCCc----cc
Q 022414           30 QSNMRILVT----GGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----R--KWIGHPRFELIRHDVTEP----LL   95 (297)
Q Consensus        30 ~~~~~ilIt----GatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~----~--~~~~~~~~~~~~~Dl~~~----~~   95 (297)
                      .++|+|+||    |||||||++|++.|+++| ++|++++|+........    .  ..+...+++++.+|+.+.    ..
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~  128 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAG-HEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAG  128 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCC-CEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhcc
Confidence            345899999    999999999999999999 99999999764321100    0  011123588899999763    12


Q ss_pred             CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~  174 (297)
                      .++|+|||+++.                +..++.+++++|++.|+ +|||+||.++|+.....+..|+     ++..|..
T Consensus       129 ~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~-----~~~~p~~  187 (378)
T PLN00016        129 AGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEG-----DAVKPKA  187 (378)
T ss_pred             CCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCC-----CcCCCcc
Confidence            479999998742                13467889999999999 8999999999987655555555     3444422


Q ss_pred             hHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                          +|..+|.+++    +.+++++++||+.+|||...   ..+...++..+..+.++.+++++.+.++++|++|+|+++
T Consensus       188 ----sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~---~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai  256 (378)
T PLN00016        188 ----GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNN---KDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMF  256 (378)
T ss_pred             ----hHHHHHHHHH----HcCCCeEEEeceeEECCCCC---CchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHH
Confidence                7999998764    35899999999999999743   234455666777888888778889999999999999999


Q ss_pred             HHHHhcCC--CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          255 IRLMEGEN--TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       255 ~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +.+++++.  ++.||+++++.+|+.|+++.+.+.+|.+..++
T Consensus       257 ~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~  298 (378)
T PLN00016        257 ALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIV  298 (378)
T ss_pred             HHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCcee
Confidence            99999864  67899999999999999999999999876543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.98  E-value=5.9e-30  Score=219.03  Aligned_cols=245  Identities=22%  Similarity=0.330  Sum_probs=184.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~a~~  107 (297)
                      |+|+||||+||||+++++.|+++| ++|++++|+......     +...+++++.+|+.+..     ..++|+|||+|+.
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~   74 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQG-EEVRVLVRPTSDRRN-----LEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAAD   74 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCC-CEEEEEEecCccccc-----cccCCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence            689999999999999999999999 999999996433211     11236888999998752     3478999999975


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCC-CCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDP-LVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~-~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      ..  ....++...++.|+.++.++++++++.++ ++|++||..+|+.. ...+.+|+...  .+..+...|+.+|.++|+
T Consensus        75 ~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~e~  150 (328)
T TIGR03466        75 YR--LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPS--SLDDMIGHYKRSKFLAEQ  150 (328)
T ss_pred             cc--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCC--CcccccChHHHHHHHHHH
Confidence            42  23455778889999999999999999988 89999999999853 33456665211  111224579999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCc-
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG-  264 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~-  264 (297)
                      .++.+..+.+++++++||+.+||++....  .....++.....+......   +...+++|++|+|++++.+++++..+ 
T Consensus       151 ~~~~~~~~~~~~~~ilR~~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~~~~~  225 (328)
T TIGR03466       151 AALEMAAEKGLPVVIVNPSTPIGPRDIKP--TPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERGRIGE  225 (328)
T ss_pred             HHHHHHHhcCCCEEEEeCCccCCCCCCCC--CcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCCCCCc
Confidence            99999887799999999999999985321  1122333333433322222   23368999999999999999887654 


Q ss_pred             cEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          265 PINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       265 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      .|++ +++.+++.|+++.+.+.+|.+.+.
T Consensus       226 ~~~~-~~~~~s~~e~~~~i~~~~g~~~~~  253 (328)
T TIGR03466       226 RYIL-GGENLTLKQILDKLAEITGRPAPR  253 (328)
T ss_pred             eEEe-cCCCcCHHHHHHHHHHHhCCCCCC
Confidence            5655 568899999999999999976543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.98  E-value=4.3e-30  Score=215.86  Aligned_cols=224  Identities=19%  Similarity=0.252  Sum_probs=167.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~  110 (297)
                      ..|+||||||+||||++|++.|+++| ++|+...+... ..+            .+..|+.+   .++|+|||+||....
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g-~~V~~~~~~~~-~~~------------~v~~~l~~---~~~D~ViH~Aa~~~~   70 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQG-IDFHYGSGRLE-NRA------------SLEADIDA---VKPTHVFNAAGVTGR   70 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCC-CEEEEecCccC-CHH------------HHHHHHHh---cCCCEEEECCcccCC
Confidence            35899999999999999999999999 88875432110 001            11222222   368999999997753


Q ss_pred             cc---cccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCC------CCCCCCCCCCCCCCCCCChHHHhHH
Q 022414          111 IF---YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLV------HPQDESYWGNVNPIGVRSCYDEGKR  181 (297)
Q Consensus       111 ~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~------~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (297)
                      ..   ...++.+.+++|+.++.+++++|++.+++++++||.++|+....      .+++|+.    .+..+.+.|+.+|.
T Consensus        71 ~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~----~p~~~~s~Yg~sK~  146 (298)
T PLN02778         71 PNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEED----TPNFTGSFYSKTKA  146 (298)
T ss_pred             CCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCC----CCCCCCCchHHHHH
Confidence            22   34678889999999999999999999998888888888865321      1345542    23345578999999


Q ss_pred             HHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       182 ~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      ++|.++..+.     +..++|+..++|++..     ....++..+..++.+...+     .++++++|++++++.+++.+
T Consensus       147 ~~E~~~~~y~-----~~~~lr~~~~~~~~~~-----~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~  211 (298)
T PLN02778        147 MVEELLKNYE-----NVCTLRVRMPISSDLS-----NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRN  211 (298)
T ss_pred             HHHHHHHHhh-----ccEEeeecccCCcccc-----cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCC
Confidence            9999998765     3467888777776421     1233566777776654332     26999999999999999876


Q ss_pred             CCccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          262 NTGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       262 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      ..|.||+++++.+|+.|+++.+++.+|.+
T Consensus       212 ~~g~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        212 LTGIYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             CCCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            67899999999999999999999999963

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.97  E-value=1.9e-29  Score=212.43  Aligned_cols=239  Identities=18%  Similarity=0.177  Sum_probs=171.6

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCcc--
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIF--  112 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~~--  112 (297)
                      ||||||+||||+++++.|+++| ++|++++|+.........     ..+.....+.......++|+|||+|+......  
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~   74 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDG-HEVTILTRSPPAGANTKW-----EGYKPWAPLAESEALEGADAVINLAGEPIADKRW   74 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcC-CEEEEEeCCCCCCCcccc-----eeeecccccchhhhcCCCCEEEECCCCCcccccC
Confidence            6899999999999999999999 999999997654322110     11111111222234568999999998654321  


Q ss_pred             cccChhhhHHHhHHHHHHHHHHHHHcCC---eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHH
Q 022414          113 YKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD  189 (297)
Q Consensus       113 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  189 (297)
                      ....+...++.|+.++.+++++|++.++   ++++.|+..+|+.....+++|+     .+..+...|+..+...|..+..
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~-----~~~~~~~~~~~~~~~~e~~~~~  149 (292)
T TIGR01777        75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEE-----DSPAGDDFLAELCRDWEEAAQA  149 (292)
T ss_pred             CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcc-----cCCCCCChHHHHHHHHHHHhhh
Confidence            1223556778999999999999999986   3566677778887655667776     3334445566667667766554


Q ss_pred             HHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-CccEEe
Q 022414          190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINI  268 (297)
Q Consensus       190 ~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i  268 (297)
                      . .+.+++++++||+.+|||..     +....+........... .++++..++++|++|+|+++..+++++. .+.||+
T Consensus       150 ~-~~~~~~~~ilR~~~v~G~~~-----~~~~~~~~~~~~~~~~~-~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~  222 (292)
T TIGR01777       150 A-EDLGTRVVLLRTGIVLGPKG-----GALAKMLPPFRLGLGGP-LGSGRQWFSWIHIEDLVQLILFALENASISGPVNA  222 (292)
T ss_pred             c-hhcCCceEEEeeeeEECCCc-----chhHHHHHHHhcCcccc-cCCCCcccccEeHHHHHHHHHHHhcCcccCCceEe
Confidence            3 34589999999999999963     12333332222111112 3778899999999999999999998865 789999


Q ss_pred             cCCCcccHHHHHHHHHHhhcccC
Q 022414          269 GNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       269 ~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      ++++.+|+.|+++.+.+.+|.+.
T Consensus       223 ~~~~~~s~~di~~~i~~~~g~~~  245 (292)
T TIGR01777       223 TAPEPVRNKEFAKALARALHRPA  245 (292)
T ss_pred             cCCCccCHHHHHHHHHHHhCCCC
Confidence            99999999999999999999653

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.97  E-value=2.3e-29  Score=211.84  Aligned_cols=246  Identities=16%  Similarity=0.165  Sum_probs=176.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc--cchhhhc-CCCceEEEecccCCc-----ccCCcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWI-GHPRFELIRHDVTEP-----LLIEVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~-~~~~~~~~~~Dl~~~-----~~~~~d~v  101 (297)
                      ..+++|+|||||||||+++++.|+++| ++|+++.|+.....  +.+.... ...++.++.+|+++.     .+.++|.|
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v   82 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRG-YTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGL   82 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEE
Confidence            346899999999999999999999999 99999998532111  1111111 123688899999876     34579999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-CC-eEEEEecceeecC--C---CCCCCCCCCCCCCC-CCCCC
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGD--P---LVHPQDESYWGNVN-PIGVR  173 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~~~~~~--~---~~~~~~e~~~~~~~-~~~~~  173 (297)
                      +|+++....  ...+..+.+++|+.++.+++++|.+. ++ |+|++||...+..  .   ...+++|+.|.... ...+.
T Consensus        83 ~~~~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  160 (297)
T PLN02583         83 FCCFDPPSD--YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFK  160 (297)
T ss_pred             EEeCccCCc--ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcc
Confidence            998754322  12345678999999999999999886 56 8999999876431  1   12345666443211 11122


Q ss_pred             ChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHH
Q 022414          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                      ..|+.+|..+|+.++.+.++.+++++++||++||||......     .    ...+.. ....  +..+.++|++|+|++
T Consensus       161 ~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~-----~----~~~~~~-~~~~--~~~~~~v~V~Dva~a  228 (297)
T PLN02583        161 LWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN-----P----YLKGAA-QMYE--NGVLVTVDVNFLVDA  228 (297)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch-----h----hhcCCc-ccCc--ccCcceEEHHHHHHH
Confidence            369999999999999998777999999999999999853321     0    122221 1112  234579999999999


Q ss_pred             HHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       254 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      ++.+++++. .+.|+++++....+.++++.+.+.++.-
T Consensus       229 ~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~  266 (297)
T PLN02583        229 HIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLI  266 (297)
T ss_pred             HHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCC
Confidence            999999877 6677777755556788999999987753

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.97  E-value=1.2e-29  Score=215.53  Aligned_cols=221  Identities=14%  Similarity=0.175  Sum_probs=170.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~~  107 (297)
                      |+|+|||||||+|+++++.|+++| ++|++++|+.... .    .+...+++++.+|+++.     .+.++|+|||+++.
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g-~~V~~l~R~~~~~-~----~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~   74 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEG-YQVRCLVRNLRKA-S----FLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTS   74 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcChHHh-h----hHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence            689999999999999999999999 9999999964221 1    11124788999999876     35689999998753


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      .     ..++....++|+.++.+++++|++.|+ |||++||.....                  .+...|..+|..+|+.
T Consensus        75 ~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~------------------~~~~~~~~~K~~~e~~  131 (317)
T CHL00194         75 R-----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ------------------YPYIPLMKLKSDIEQK  131 (317)
T ss_pred             C-----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc------------------cCCChHHHHHHHHHHH
Confidence            2     234455678899999999999999999 899999864321                  0113488999999987


Q ss_pred             HHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--Cc
Q 022414          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG  264 (297)
Q Consensus       187 ~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~  264 (297)
                      ++    +.+++++++||+.+|+..        +..+......+.+..+ ..+.+.++++|++|+|++++.+++++.  ++
T Consensus       132 l~----~~~l~~tilRp~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~  198 (317)
T CHL00194        132 LK----KSGIPYTIFRLAGFFQGL--------ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNK  198 (317)
T ss_pred             HH----HcCCCeEEEeecHHhhhh--------hhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCc
Confidence            74    468999999999887531        1112222233444443 455677899999999999999998764  67


Q ss_pred             cEEecCCCcccHHHHHHHHHHhhcccCceee
Q 022414          265 PINIGNPGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       265 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      +||+++++.+|+.|+++.+.+.+|.+..+..
T Consensus       199 ~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~  229 (317)
T CHL00194        199 TFPLVGPKSWNSSEIISLCEQLSGQKAKISR  229 (317)
T ss_pred             EEEecCCCccCHHHHHHHHHHHhCCCCeEEe
Confidence            9999999999999999999999998766554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=2.5e-29  Score=218.43  Aligned_cols=237  Identities=19%  Similarity=0.203  Sum_probs=181.6

Q ss_pred             cccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc--hhhhc-CCCceEEEecccCCcc-----c
Q 022414           24 RFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN--LRKWI-GHPRFELIRHDVTEPL-----L   95 (297)
Q Consensus        24 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~--~~~~~-~~~~~~~~~~Dl~~~~-----~   95 (297)
                      .+......+|+|+|||||||||++++++|+++| ++|++++|+.......  ..... ...+++++.+|++|..     .
T Consensus        52 ~~~~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~  130 (390)
T PLN02657         52 SFRSKEPKDVTVLVVGATGYIGKFVVRELVRRG-YNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVL  130 (390)
T ss_pred             cccccCCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHH
Confidence            333445668999999999999999999999999 9999999975432110  11111 1247889999999863     1


Q ss_pred             C----CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           96 I----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        96 ~----~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      .    ++|+||||++....     ...+.+++|+.++.+++++|++.|+ +||++||.++++                  
T Consensus       131 ~~~~~~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~------------------  187 (390)
T PLN02657        131 FSEGDPVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK------------------  187 (390)
T ss_pred             HHhCCCCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC------------------
Confidence            2    59999999874321     1234567889999999999999998 899999987652                  


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE-eeeeHHH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR-SFCYVSD  249 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D  249 (297)
                       |...|..+|...|+.+..  ...+++++++||+.+||+.         ...+..+..++++.++++++..+ .++|++|
T Consensus       188 -p~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~---------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~D  255 (390)
T PLN02657        188 -PLLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL---------GGQVEIVKDGGPYVMFGDGKLCACKPISEAD  255 (390)
T ss_pred             -cchHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc---------HHHHHhhccCCceEEecCCcccccCceeHHH
Confidence             123588999999998865  3468999999999999743         12345556777777778887644 6799999


Q ss_pred             HHHHHHHHHhcCC--CccEEecCC-CcccHHHHHHHHHHhhcccCceeec
Q 022414          250 MVDGLIRLMEGEN--TGPINIGNP-GEFTMLELAENVKEVNFYLGRLLVC  296 (297)
Q Consensus       250 va~~~~~~~~~~~--~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~  296 (297)
                      +|++++.++.++.  +++||++++ +.+|+.|+++.+.+.+|.+.+++.+
T Consensus       256 lA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~v  305 (390)
T PLN02657        256 LASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKV  305 (390)
T ss_pred             HHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEc
Confidence            9999999997654  679999986 5899999999999999987766543

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=1.2e-29  Score=204.18  Aligned_cols=257  Identities=27%  Similarity=0.419  Sum_probs=209.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhh---hc-CCCceEEEecccCCccc-------CCcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---WI-GHPRFELIRHDVTEPLL-------IEVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~---~~-~~~~~~~~~~Dl~~~~~-------~~~d~  100 (297)
                      .++||||||.||||+|.+-+|+++| +.|++++.-.....+.+..   +. ...++.++++|+.|..+       .++|.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~g-y~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~   80 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRG-YGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA   80 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCC-CcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence            5789999999999999999999999 9999998876554443332   22 23589999999998733       36999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCC-CCChHHH
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG-VRSCYDE  178 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~~~Y~~  178 (297)
                      |+|.|+.-....+-++|..++..|+.++.++++.+++.++ .+|+.||+.+||.+..-|++|+     .+.. |.++|+.
T Consensus        81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~-----~~t~~p~~pyg~  155 (343)
T KOG1371|consen   81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEE-----DPTDQPTNPYGK  155 (343)
T ss_pred             EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCc-----CCCCCCCCcchh
Confidence            9999998888888888999999999999999999999998 7999999999999999999998     5555 8888999


Q ss_pred             hHHHHHHHHHHHHHHhCCcEEEEeeccccC--CCCCCCC------hhHHHHHHHHHHc---------CCCeEEecCCcee
Q 022414          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYG--PRMNIDD------GRVVSNFIAQAIR---------GEPLTVQAPGTQT  241 (297)
Q Consensus       179 sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G--~~~~~~~------~~~~~~~~~~~~~---------~~~~~~~~~~~~~  241 (297)
                      +|.+.|..+..+.+..++.++.+|-++++|  |......      .+..+ .+.+..-         +.... ..+|+..
T Consensus       156 tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~-t~dgt~v  233 (343)
T KOG1371|consen  156 TKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYT-TIDGTIV  233 (343)
T ss_pred             hhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCccc-ccCCCee
Confidence            999999999999988889999999999999  4321111      12222 1111111         12222 2356889


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccHHHHHHHHHHhhcccCceeec
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKEVNFYLGRLLVC  296 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  296 (297)
                      ++++|+-|.|+..+.++.+..    -++||+..+...+..+|+.++++..|.+.++..+
T Consensus       234 rdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v  292 (343)
T KOG1371|consen  234 RDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVV  292 (343)
T ss_pred             ecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCcccc
Confidence            999999999999999998765    4599999999999999999999999999766544

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-29  Score=231.22  Aligned_cols=247  Identities=25%  Similarity=0.266  Sum_probs=183.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHH--hcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc----------cCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLM--ENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL----------LIE   97 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~--~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~----------~~~   97 (297)
                      |+|||||||||||++|++.|+  +.| ++|++++|+..  ...+...   ....+++++.+|+.+..          +.+
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g-~~V~~l~R~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~   77 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRRQS--LSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGD   77 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCC-CEEEEEECcch--HHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcC
Confidence            689999999999999999999  467 99999999532  1222221   12246889999998742          257


Q ss_pred             cCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChH
Q 022414           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (297)
                      +|+|||||+....   ........++|+.++.+++++|++.++ +|||+||..+|+... ...+|+.+.  .+..+.+.|
T Consensus        78 ~D~Vih~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~-~~~~e~~~~--~~~~~~~~Y  151 (657)
T PRK07201         78 IDHVVHLAAIYDL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYE-GVFREDDFD--EGQGLPTPY  151 (657)
T ss_pred             CCEEEECceeecC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCcc-Cccccccch--hhcCCCCch
Confidence            9999999986543   234566778999999999999999988 899999999998643 234444322  122344679


Q ss_pred             HHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-----hhHHHHHHHHHHcC-CCeEEecCCceeEeeeeHHHH
Q 022414          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-----GRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDM  250 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dv  250 (297)
                      +.+|.++|+.+++   ..+++++++||+.+||+......     ..++..++..+... ..+...+.+....+++|++|+
T Consensus       152 ~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddv  228 (657)
T PRK07201        152 HRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYV  228 (657)
T ss_pred             HHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHH
Confidence            9999999999864   34899999999999998643211     11222333333211 123344556677899999999


Q ss_pred             HHHHHHHHhcCC--CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          251 VDGLIRLMEGEN--TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       251 a~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      |+++..++..+.  ++.||+++++++++.|+++.+.+.+|.+.
T Consensus       229 a~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        229 ADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             HHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence            999999987654  56999999999999999999999999865

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=7.2e-29  Score=206.96  Aligned_cols=253  Identities=25%  Similarity=0.305  Sum_probs=199.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCc-----ccCCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEP-----LLIEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~-----~~~~~d~vi  102 (297)
                      ++.+++||||+||+|++++++|++++ ..++++++....... ......  ....++++++|+.+.     ++.++ .|+
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv   80 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV   80 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence            46789999999999999999999998 578888888653211 111111  256789999999876     45578 888


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCC-CCCCCCCCCCCCCCCCChHHHhH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVH-PQDESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~-~~~e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      |||+...+.....+++.++++|+.++.+++++|++.|+ ++||+||..|....... ..+|+..   .|......|+.+|
T Consensus        81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p---~p~~~~d~Y~~sK  157 (361)
T KOG1430|consen   81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLP---YPLKHIDPYGESK  157 (361)
T ss_pred             EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCC---CccccccccchHH
Confidence            88887666666667889999999999999999999999 89999999997766552 3344421   1222335799999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHh-
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME-  259 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~-  259 (297)
                      ..+|+++.+.+...++.++.+||+.||||++    ..+++.+...+..+..+...++++..-++++++.||.+.+.+.. 
T Consensus       158 a~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd----~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~a  233 (361)
T KOG1430|consen  158 ALAEKLVLEANGSDDLYTCALRPPGIYGPGD----KRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARA  233 (361)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEccccccCCCC----ccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHH
Confidence            9999999988765579999999999999984    55778888888888888877888888999999999887764332 


Q ss_pred             ---c-CC--CccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          260 ---G-EN--TGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       260 ---~-~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                         . +.  ++.|+|.++.++...++...+.+.+|....
T Consensus       234 L~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~  272 (361)
T KOG1430|consen  234 LLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLP  272 (361)
T ss_pred             HHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCC
Confidence               2 22  558999999999888888899999998765

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.97  E-value=1.1e-28  Score=194.40  Aligned_cols=236  Identities=19%  Similarity=0.230  Sum_probs=173.7

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-cCCcCEEEEccCCCCCcc-
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-LIEVDQIYHLACPASPIF-  112 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~d~vi~~a~~~~~~~-  112 (297)
                      |+|||||||||++|+..|.+.| |+|++++|+.+.....+..     .+.  ..|-.+.. ..++|+|||+||..-... 
T Consensus         1 IliTGgTGlIG~~L~~~L~~~g-h~v~iltR~~~~~~~~~~~-----~v~--~~~~~~~~~~~~~DavINLAG~~I~~rr   72 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGG-HQVTILTRRPPKASQNLHP-----NVT--LWEGLADALTLGIDAVINLAGEPIAERR   72 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCC-CeEEEEEcCCcchhhhcCc-----ccc--ccchhhhcccCCCCEEEECCCCcccccc
Confidence            6899999999999999999999 9999999987655443321     122  22222222 227999999999665433 


Q ss_pred             -cccChhhhHHHhHHHHHHHHHHHHHcCC---eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHH
Q 022414          113 -YKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (297)
Q Consensus       113 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~  188 (297)
                       ..+..+..++..+..+..+.++..+...   .+|.-|.+..||......++|+.     +. ....-...-..-|....
T Consensus        73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~-----~~-g~~Fla~lc~~WE~~a~  146 (297)
T COG1090          73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEES-----PP-GDDFLAQLCQDWEEEAL  146 (297)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCC-----CC-CCChHHHHHHHHHHHHh
Confidence             3344667788999999999999986554   36666667779999888888872     22 11223333334444433


Q ss_pred             HHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-CccEE
Q 022414          189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPIN  267 (297)
Q Consensus       189 ~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~  267 (297)
                      .. +..+.+++++|.|.|.++.     ..++..++...+-+--.++ |+|+++++|||++|+++++.+++++.. .|.||
T Consensus       147 ~a-~~~gtRvvllRtGvVLs~~-----GGaL~~m~~~fk~glGG~~-GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N  219 (297)
T COG1090         147 QA-QQLGTRVVLLRTGVVLSPD-----GGALGKMLPLFKLGLGGKL-GSGRQWFSWIHIEDLVNAILFLLENEQLSGPFN  219 (297)
T ss_pred             hh-hhcCceEEEEEEEEEecCC-----CcchhhhcchhhhccCCcc-CCCCceeeeeeHHHHHHHHHHHHhCcCCCCccc
Confidence            32 3458999999999999987     3455555543333322233 999999999999999999999999987 99999


Q ss_pred             ecCCCcccHHHHHHHHHHhhcccC
Q 022414          268 IGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       268 i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      ++++.+++..+|.+.+.++++.+.
T Consensus       220 ~taP~PV~~~~F~~al~r~l~RP~  243 (297)
T COG1090         220 LTAPNPVRNKEFAHALGRALHRPA  243 (297)
T ss_pred             ccCCCcCcHHHHHHHHHHHhCCCc
Confidence            999999999999999999999654

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=2.5e-28  Score=210.24  Aligned_cols=237  Identities=27%  Similarity=0.356  Sum_probs=203.7

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc---chhhhcCCCceEEEecccCCccc-----C--
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKWIGHPRFELIRHDVTEPLL-----I--   96 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~-----~--   96 (297)
                      .....+|+|+||||+|-||+++++++++.+..++++++|+..+..+   +++...+..++.++-+|+.|.+.     .  
T Consensus       245 ~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~  324 (588)
T COG1086         245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH  324 (588)
T ss_pred             HhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence            3445799999999999999999999999987899999997654332   23333334678889999998732     2  


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      ++|+|||+|+.-.....+.+|.+.++.|+.+++|++++|.++|+ +||.+||..                   ..+|.+.
T Consensus       325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK-------------------AV~PtNv  385 (588)
T COG1086         325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK-------------------AVNPTNV  385 (588)
T ss_pred             CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc-------------------ccCCchH
Confidence            49999999998777778999999999999999999999999999 899999965                   3456688


Q ss_pred             HHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHH
Q 022414          176 YDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      ||.+|..+|+.+..+....   +..+..+|.|+|.|..     ++.++-+.+++.+|+++++ .+++-.+-|+.+.|.++
T Consensus       386 mGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-----GSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~  459 (588)
T COG1086         386 MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQ  459 (588)
T ss_pred             hhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-----CCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHH
Confidence            9999999999999987643   3899999999999976     6789999999999999987 67888899999999999


Q ss_pred             HHHHHHhcCCCc-cEEecCCCcccHHHHHHHHHHhhc
Q 022414          253 GLIRLMEGENTG-PINIGNPGEFTMLELAENVKEVNF  288 (297)
Q Consensus       253 ~~~~~~~~~~~~-~~~i~~~~~~s~~e~~~~i~~~~g  288 (297)
                      .++.+.....+| +|.+.-|++++..|+++.+.+..|
T Consensus       460 LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         460 LVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             HHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            999999888744 788888899999999999999998

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.97  E-value=2.1e-29  Score=204.34  Aligned_cols=231  Identities=26%  Similarity=0.343  Sum_probs=174.0

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceE----EEecccCCcc-----cC--CcCE
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFE----LIRHDVTEPL-----LI--EVDQ  100 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~----~~~~Dl~~~~-----~~--~~d~  100 (297)
                      ||||||+|.||++|+++|++.+..++++++++.....+...++   ....++.    .+.+|+.|..     ..  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999998678999999754433222222   2233443    3477887752     23  7999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHh
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      |||+|+.-.....+.+|.+.++.|+.++.+++++|.+.++ +||++||.-+                   .+|.+.||.+
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA-------------------v~PtnvmGat  141 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA-------------------VNPTNVMGAT  141 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC-------------------SS--SHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc-------------------CCCCcHHHHH
Confidence            9999998777778899999999999999999999999999 8999999754                   3466889999


Q ss_pred             HHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHH
Q 022414          180 KRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       180 K~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      |..+|+++..++...   +..+.++|.|+|.|..     ++.++-+.+++.+|+++.+ .+++-.+-++.+++.++.++.
T Consensus       142 KrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-----GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~  215 (293)
T PF02719_consen  142 KRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-----GSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQ  215 (293)
T ss_dssp             HHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-----TSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-----CcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHH
Confidence            999999999887654   5899999999999965     6789999999999999988 567888999999999999999


Q ss_pred             HHhcCC-CccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          257 LMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       257 ~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      +..... +.+|.+.-|+++++.|+++.+.+.+|..
T Consensus       216 a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  216 AAALAKGGEIFVLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             HHHH--TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred             HHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence            988876 5578888889999999999999999853

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.96  E-value=1e-27  Score=208.20  Aligned_cols=253  Identities=22%  Similarity=0.277  Sum_probs=182.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCc--cchhhhc----------CCCceEEEecccCCcc------
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSK--DNLRKWI----------GHPRFELIRHDVTEPL------   94 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~--~~~~~~~----------~~~~~~~~~~Dl~~~~------   94 (297)
                      +|+|||||||+|+++++.|+++|. .+|+++.|+.....  +.+...+          ...++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            589999999999999999999973 46999999754211  1111110          0047889999987642      


Q ss_pred             -----cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           95 -----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        95 -----~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                           ..++|+|||+|+....   ........+.|+.++.+++++|.+.++ +|+++||.++|+.....+..++......
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~  157 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTP  157 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccccc
Confidence                 2369999999986542   344566778999999999999999888 6999999999876433322333211111


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCC--CChhHHHHHHHHHHcCCCeEEecCCc-eeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI--DDGRVVSNFIAQAIRGEPLTVQAPGT-QTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i  245 (297)
                      ...+.+.|+.+|..+|.+++.+... +++++++||+.+||+....  ....++..++.........   .... ...+++
T Consensus       158 ~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~~  233 (367)
T TIGR01746       158 PPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY---PDSPELTEDLT  233 (367)
T ss_pred             ccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC---CCCCccccCcc
Confidence            2233467999999999999887654 8999999999999974321  1123455555544443322   2222 356799


Q ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      |++|+|++++.++..+.    ++.||+++++.+++.|+++.+.+ .|.+.+++
T Consensus       234 ~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~  285 (367)
T TIGR01746       234 PVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLV  285 (367)
T ss_pred             cHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcC
Confidence            99999999999988765    46899999999999999999999 88765543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=6.6e-28  Score=189.82  Aligned_cols=254  Identities=24%  Similarity=0.249  Sum_probs=207.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc---h--hhhcCCCceEEEecccCCcc-------cCCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---L--RKWIGHPRFELIRHDVTEPL-------LIEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~---~--~~~~~~~~~~~~~~Dl~~~~-------~~~~d   99 (297)
                      +|++||||-||+-|++|++.|++.| ++|.++.|........   +  .+.....++.++.+|++|..       ..++|
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekG-Y~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKG-YEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcC-cEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            6889999999999999999999999 9999999975433322   1  12233446889999999873       34799


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChH
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (297)
                      -|+|+|+.+....+.+.|..+.+++..++.+++++.+-.+   +||.+.||+..||.....|..|.     +|+.|+++|
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~-----TPFyPrSPY  155 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPY  155 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccC-----CCCCCCCHH
Confidence            9999999988888899999999999999999999998865   48999999999999988899998     899999999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCCeE-EecCCceeEeeeeHHHHHHHH
Q 022414          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLT-VQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      +.+|.-+..+..++.+.+++-.+.-...+-=+|...... .+-+..-+..+..|..-. ..|+-+..+||.|+.|.+++|
T Consensus       156 AvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~m  235 (345)
T COG1089         156 AVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAM  235 (345)
T ss_pred             HHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHH
Confidence            999999999999998888875554444443344322111 123344445566665432 348999999999999999999


Q ss_pred             HHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          255 IRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       255 ~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +.+++++....|.++.|+..|.+||++...+..|++.
T Consensus       236 wlmLQq~~PddyViATg~t~sVrefv~~Af~~~g~~l  272 (345)
T COG1089         236 WLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDL  272 (345)
T ss_pred             HHHHccCCCCceEEecCceeeHHHHHHHHHHHcCceE
Confidence            9999999999999999999999999999999999654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=2.1e-27  Score=180.87  Aligned_cols=243  Identities=27%  Similarity=0.354  Sum_probs=200.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCC--eEEEEecCCCCCccchhhhcCCCceEEEecccCCc-------ccCCcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-------LLIEVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------~~~~~d~vi  102 (297)
                      +|||||||++|.+|++|.+.+.+.| .  +=.++.-                   .-++||++.       ...++..||
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~-~~~e~wvf~~-------------------skd~DLt~~a~t~~lF~~ekPthVI   60 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQG-FDDENWVFIG-------------------SKDADLTNLADTRALFESEKPTHVI   60 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcC-CCCcceEEec-------------------cccccccchHHHHHHHhccCCceee
Confidence            4899999999999999999999987 3  1111111                   113455554       234689999


Q ss_pred             EccCCCCCcc-cccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhH
Q 022414          103 HLACPASPIF-YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       103 ~~a~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      |+|+...-.. ....+.+++..|+.-.-++++.|-+.|+ +++++.|+++|.+..+.|++|....+..|.+...+|..+|
T Consensus        61 hlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAK  140 (315)
T KOG1431|consen   61 HLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAK  140 (315)
T ss_pred             ehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHH
Confidence            9998654322 2345678899999999999999999999 8999999999999999999999888887878888999999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHc----CC-CeEEecCCceeEeeeeHHHHHHH
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIR----GE-PLTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                      .++.-..+.+.++++..++.+-|.++|||.++...  +..++.+++.+..    +. .+.+||.|...+.++|++|+|++
T Consensus       141 r~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l  220 (315)
T KOG1431|consen  141 RMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADL  220 (315)
T ss_pred             HHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHH
Confidence            99888889999999999999999999999986543  4577888776543    33 58899999999999999999999


Q ss_pred             HHHHHhcCC-CccEEecCCC--cccHHHHHHHHHHhhcccCcee
Q 022414          254 LIRLMEGEN-TGPINIGNPG--EFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       254 ~~~~~~~~~-~~~~~i~~~~--~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      ++.++.+=. -...+++.|+  ++|++|+++.+.++++..+++.
T Consensus       221 ~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~  264 (315)
T KOG1431|consen  221 FIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLV  264 (315)
T ss_pred             HHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEE
Confidence            999998754 5578888886  8999999999999999998775

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.94  E-value=2.8e-26  Score=188.24  Aligned_cols=214  Identities=24%  Similarity=0.285  Sum_probs=127.1

Q ss_pred             EEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCC--ccchhhh---------c---CCCceEEEecccCCccc------
Q 022414           37 VTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGS--KDNLRKW---------I---GHPRFELIRHDVTEPLL------   95 (297)
Q Consensus        37 ItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~--~~~~~~~---------~---~~~~~~~~~~Dl~~~~~------   95 (297)
                      |||||||+|++|+++|++.+. .+|+++.|.....  .+.+...         .   ...++.++.+|++++.+      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999982 2999999975321  1222111         1   14689999999998632      


Q ss_pred             -----CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCC-----CC
Q 022414           96 -----IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDES-----YW  164 (297)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~-----~~  164 (297)
                           .++|+|||||+..+.   ..+..+..+.|+.++.++++.|.+.+. +|+|+||..+.+..... ..|.     ..
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~---~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~-~~~~~~~~~~~  156 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNF---NAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGT-IEEKVYPEEED  156 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SB---S-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT---SSS-HHH--
T ss_pred             hhccccccceeeecchhhhh---cccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCc-ccccccccccc
Confidence                 259999999987653   446667889999999999999997665 89999995554443321 1111     01


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCC-CC-ChhHHHHHHHHHHc-CCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN-ID-DGRVVSNFIAQAIR-GEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~-~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~  241 (297)
                      .........+.|..||+.+|++++++.++.++++.|+||+.|+|...+ .. ...+...++..... +......++.+..
T Consensus       157 ~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  236 (249)
T PF07993_consen  157 DLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDAR  236 (249)
T ss_dssp             EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT
T ss_pred             cchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCce
Confidence            111223344689999999999999999888999999999999993221 11 22334444444444 3323344555566


Q ss_pred             EeeeeHHHHHHHH
Q 022414          242 RSFCYVSDMVDGL  254 (297)
Q Consensus       242 ~~~i~v~Dva~~~  254 (297)
                      .++++|+.+|++|
T Consensus       237 ~d~vPVD~va~aI  249 (249)
T PF07993_consen  237 LDLVPVDYVARAI  249 (249)
T ss_dssp             --EEEHHHHHHHH
T ss_pred             EeEECHHHHHhhC
Confidence            9999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.94  E-value=1e-24  Score=195.65  Aligned_cols=253  Identities=17%  Similarity=0.164  Sum_probs=179.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC--CeEEEEecCCCCCc--cchh-hhc-------------------CCCceEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSK--DNLR-KWI-------------------GHPRFELI   86 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~--~~~~-~~~-------------------~~~~~~~~   86 (297)
                      .+|+|||||||||||++|++.|++.+.  .+|+++.|......  +.+. .++                   ...++..+
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            589999999999999999999998752  47899999754321  1221 110                   02468889


Q ss_pred             ecccCCcc-----------cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecC
Q 022414           87 RHDVTEPL-----------LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGD  153 (297)
Q Consensus        87 ~~Dl~~~~-----------~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~  153 (297)
                      .+|+++..           ..++|+|||+|+...   ...++...+++|+.++.+++++|++.+ . +|||+||.++||.
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~---f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~  274 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTT---FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQ  274 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccc---cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecC
Confidence            99998862           135999999998764   345678889999999999999999875 4 7999999999987


Q ss_pred             CCCCCCCCCCCCCC---------------------------------C---------------------CCCCCChHHHh
Q 022414          154 PLVHPQDESYWGNV---------------------------------N---------------------PIGVRSCYDEG  179 (297)
Q Consensus       154 ~~~~~~~e~~~~~~---------------------------------~---------------------~~~~~~~Y~~s  179 (297)
                      .. ..+.|..+...                                 .                     .....+.|..+
T Consensus       275 ~~-G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~T  353 (605)
T PLN02503        275 RQ-GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFT  353 (605)
T ss_pred             CC-CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHH
Confidence            53 22333322100                                 0                     01112679999


Q ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-----hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHH
Q 022414          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-----GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       180 K~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      |..+|+.+++..  .+++++|+||+.|.+....+-+     .......+.....|..-.+.++++...++|+|+.|++++
T Consensus       354 K~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~  431 (605)
T PLN02503        354 KAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNAT  431 (605)
T ss_pred             HHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHH
Confidence            999999998654  4799999999999543222210     011111111122333233668899999999999999999


Q ss_pred             HHHHhc-C-----CCccEEecCC--CcccHHHHHHHHHHhhcc
Q 022414          255 IRLMEG-E-----NTGPINIGNP--GEFTMLELAENVKEVNFY  289 (297)
Q Consensus       255 ~~~~~~-~-----~~~~~~i~~~--~~~s~~e~~~~i~~~~g~  289 (297)
                      +.+... .     ...+||++++  .+++|.++.+.+.+.+..
T Consensus       432 i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        432 LAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             HHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            988431 1     1468999988  899999999999886654

>PRK12320 hypothetical protein; Provisional

Probab=99.94  E-value=9.5e-25  Score=198.01  Aligned_cols=198  Identities=22%  Similarity=0.350  Sum_probs=152.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc----cCCcCEEEEccCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL----LIEVDQIYHLACPA  108 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~----~~~~d~vi~~a~~~  108 (297)
                      |||+||||+||||+++++.|+++| ++|++++|.....        ...+++++++|+.+..    ..++|+|||+|+..
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G-~~Vi~ldr~~~~~--------~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~   71 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAG-HTVSGIAQHPHDA--------LDPRVDYVCASLRNPVLQELAGEADAVIHLAPVD   71 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCChhhc--------ccCCceEEEccCCCHHHHHHhcCCCEEEEcCccC
Confidence            689999999999999999999999 9999999853211        1246888999998763    24799999999753


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHH
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~  188 (297)
                      ..        .....|+.++.+++++|++.|+|+||+||.+  |..             .      .|.    .+|.++.
T Consensus        72 ~~--------~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~~--G~~-------------~------~~~----~aE~ll~  118 (699)
T PRK12320         72 TS--------APGGVGITGLAHVANAAARAGARLLFVSQAA--GRP-------------E------LYR----QAETLVS  118 (699)
T ss_pred             cc--------chhhHHHHHHHHHHHHHHHcCCeEEEEECCC--CCC-------------c------ccc----HHHHHHH
Confidence            21        1125799999999999999999999999863  321             0      021    3565543


Q ss_pred             HHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCccEEe
Q 022414          189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINI  268 (297)
Q Consensus       189 ~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i  268 (297)
                          .++++++++|++++|||+......+++..++.....++++          .++|++|++++++.+++.+..|+||+
T Consensus       119 ----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI----------~vIyVdDvv~alv~al~~~~~GiyNI  184 (699)
T PRK12320        119 ----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPI----------RVLHLDDLVRFLVLALNTDRNGVVDL  184 (699)
T ss_pred             ----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCce----------EEEEHHHHHHHHHHHHhCCCCCEEEE
Confidence                3468999999999999975443345666666554444433          35899999999999998776789999


Q ss_pred             cCCCcccHHHHHHHHHHh
Q 022414          269 GNPGEFTMLELAENVKEV  286 (297)
Q Consensus       269 ~~~~~~s~~e~~~~i~~~  286 (297)
                      ++++.+|+.|+.+.+...
T Consensus       185 G~~~~~Si~el~~~i~~~  202 (699)
T PRK12320        185 ATPDTTNVVTAWRLLRSV  202 (699)
T ss_pred             eCCCeeEHHHHHHHHHHh
Confidence            999999999998888765

>PRK05865 hypothetical protein; Provisional

Probab=99.94  E-value=9.8e-25  Score=201.78  Aligned_cols=194  Identities=23%  Similarity=0.349  Sum_probs=152.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~a~~  107 (297)
                      |+|+||||+||||+++++.|+++| ++|++++|+....       . ..++.++.+|+.+..     ..++|+|||+|+.
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G-~~Vv~l~R~~~~~-------~-~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~   71 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQG-HEVVGIARHRPDS-------W-PSSADFIAADIRDATAVESAMTGADVVAHCAWV   71 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCchhh-------c-ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCc
Confidence            689999999999999999999999 9999999863211       1 125788899998752     3579999999975


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      ...         .+++|+.++.+++++|++.++ +||++||..                              |.++|++
T Consensus        72 ~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------------K~aaE~l  112 (854)
T PRK05865         72 RGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------------QPRVEQM  112 (854)
T ss_pred             ccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------------HHHHHHH
Confidence            421         458899999999999999998 899999842                              7788887


Q ss_pred             HHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--Cc
Q 022414          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG  264 (297)
Q Consensus       187 ~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~  264 (297)
                      +.    +++++++++||+++|||+.    ..+    +..+.. ......+++...++++|++|+|++++.+++++.  ++
T Consensus       113 l~----~~gl~~vILRp~~VYGP~~----~~~----i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~gg  179 (854)
T PRK05865        113 LA----DCGLEWVAVRCALIFGRNV----DNW----VQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSG  179 (854)
T ss_pred             HH----HcCCCEEEEEeceEeCCCh----HHH----HHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCC
Confidence            64    3589999999999999962    122    222222 222223445667899999999999999987543  67


Q ss_pred             cEEecCCCcccHHHHHHHHHHhh
Q 022414          265 PINIGNPGEFTMLELAENVKEVN  287 (297)
Q Consensus       265 ~~~i~~~~~~s~~e~~~~i~~~~  287 (297)
                      +||+++++.+|+.|+++.+.+..
T Consensus       180 vyNIgsg~~~Si~EIae~l~~~~  202 (854)
T PRK05865        180 PVNLAAPGELTFRRIAAALGRPM  202 (854)
T ss_pred             eEEEECCCcccHHHHHHHHhhhh
Confidence            99999999999999999998753

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.93  E-value=1.2e-24  Score=202.17  Aligned_cols=221  Identities=18%  Similarity=0.250  Sum_probs=158.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEE-EEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .+.||||||||+||||++|++.|.++| ++|. ...+  -...+.+.            .++   ...++|+|||||+.+
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g-~~v~~~~~~--l~d~~~v~------------~~i---~~~~pd~Vih~Aa~~  439 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQG-IAYEYGKGR--LEDRSSLL------------ADI---RNVKPTHVFNAAGVT  439 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCC-CeEEeeccc--cccHHHHH------------HHH---HhhCCCEEEECCccc
Confidence            356899999999999999999999999 8873 2211  00000010            111   113689999999977


Q ss_pred             CC---cccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCC------CCCCCCCCCCCCCCCCCCChHHHh
Q 022414          109 SP---IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPL------VHPQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       109 ~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~------~~~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      ..   .....++...+++|+.++.+++++|++.|++++++||.++|+...      ..+++|++    .+..+.+.|+.+
T Consensus       440 ~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~----~~~~~~~~Yg~s  515 (668)
T PLN02260        440 GRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEED----KPNFTGSFYSKT  515 (668)
T ss_pred             CCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCC----CCCCCCChhhHH
Confidence            42   234567888999999999999999999999889999999986421      23566663    233345889999


Q ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCC-eEEecCCceeEeeeeHHHHHHHHHHHH
Q 022414          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (297)
Q Consensus       180 K~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~  258 (297)
                      |.++|++++.+.     ++.++|+.++||.... ...+|+..++    +... +.+ .     .+...++|++.+++.++
T Consensus       516 K~~~E~~~~~~~-----~~~~~r~~~~~~~~~~-~~~nfv~~~~----~~~~~~~v-p-----~~~~~~~~~~~~~~~l~  579 (668)
T PLN02260        516 KAMVEELLREYD-----NVCTLRVRMPISSDLS-NPRNFITKIS----RYNKVVNI-P-----NSMTVLDELLPISIEMA  579 (668)
T ss_pred             HHHHHHHHHhhh-----hheEEEEEEecccCCC-CccHHHHHHh----ccceeecc-C-----CCceehhhHHHHHHHHH
Confidence            999999998763     3567788888864321 1234444443    3332 222 1     24677888998888888


Q ss_pred             hcCCCccEEecCCCcccHHHHHHHHHHhhc
Q 022414          259 EGENTGPINIGNPGEFTMLELAENVKEVNF  288 (297)
Q Consensus       259 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g  288 (297)
                      +.+.+|+||+++++.+|+.||++.+.+.++
T Consensus       580 ~~~~~giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        580 KRNLRGIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             HhCCCceEEecCCCcCcHHHHHHHHHHhcC
Confidence            765579999999999999999999999874

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.92  E-value=2.2e-23  Score=164.41  Aligned_cols=231  Identities=17%  Similarity=0.192  Sum_probs=184.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-----CCcCEEEEc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-----~~~d~vi~~  104 (297)
                      ..+-.+-|+|||||+|+.++..|.+.| ..|++-.|..+...-.+...-....+-+...|+.|++.     +...+|||+
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~G-SQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINL  137 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMG-SQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINL  137 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcC-CeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence            346778999999999999999999999 99999999765554444433344578888999998743     468999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (297)
                      .|--    ++.....+.++|..+++.|++.|++.|+ |||++|+...                  .....+-|-.+|+++
T Consensus       138 IGrd----~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga------------------nv~s~Sr~LrsK~~g  195 (391)
T KOG2865|consen  138 IGRD----YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA------------------NVKSPSRMLRSKAAG  195 (391)
T ss_pred             eccc----cccCCcccccccchHHHHHHHHHHhhChhheeehhhccc------------------cccChHHHHHhhhhh
Confidence            9732    2222334558899999999999999999 9999999763                  123336699999999


Q ss_pred             HHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC-ceeEeeeeHHHHHHHHHHHHhcCC
Q 022414          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG-TQTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       184 e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      |..+++.    -...+|+||+.+||..     .+|+..+.....+-..+++++.| +.....+++.|||++|+.++..|.
T Consensus       196 E~aVrda----fPeAtIirPa~iyG~e-----Drfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~  266 (391)
T KOG2865|consen  196 EEAVRDA----FPEATIIRPADIYGTE-----DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD  266 (391)
T ss_pred             HHHHHhh----CCcceeechhhhcccc-----hhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcc
Confidence            9998764    3457899999999986     46766666666667778888776 455689999999999999999988


Q ss_pred             --CccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          263 --TGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       263 --~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                        +.+|.+.+++...+.|+++.+-+...+..+
T Consensus       267 s~Gktye~vGP~~yql~eLvd~my~~~~~~~r  298 (391)
T KOG2865|consen  267 SMGKTYEFVGPDRYQLSELVDIMYDMAREWPR  298 (391)
T ss_pred             ccCceeeecCCchhhHHHHHHHHHHHHhhccc
Confidence              669999999999999999999887766443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.5e-23  Score=172.19  Aligned_cols=232  Identities=16%  Similarity=0.157  Sum_probs=164.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~d   99 (297)
                      .|+++||||+|+||+++++.|+++| +.|+++.|+..... .+.... ..++.++.+|+++..            ..++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g-~~v~~~~r~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARG-DRVAATVRRPDALD-DLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999 89999998642211 111111 236888999998762            23589


Q ss_pred             EEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       100 ~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      +|||+||.......    .+++...+++|+.++.++++++    ++.+. ++|++||.....                +.
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~  142 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI----------------AY  142 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc----------------CC
Confidence            99999997654322    2335667889999999999997    55565 899999965431                22


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccc---cCCCCCCCC-----hhHHHHHHHHHHcCCCeEEecCCc
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNT---YGPRMNIDD-----GRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v---~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                      .+.+.|+.+|.+.|.+++.+.++   .+++++++||+.+   ||++.....     .......+..........+     
T Consensus       143 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  217 (276)
T PRK06482        143 PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAI-----  217 (276)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCC-----
Confidence            23467999999999999888765   5899999999988   555432110     0111111222222222211     


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                          +.+++|++++++.++..+. ...|+++++...+..|+++.+.+.++...
T Consensus       218 ----~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  266 (276)
T PRK06482        218 ----PGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALEAQK  266 (276)
T ss_pred             ----CCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHHHHH
Confidence                3578999999999998765 55799999888899888888888776544

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.91  E-value=2.5e-23  Score=174.54  Aligned_cols=207  Identities=17%  Similarity=0.164  Sum_probs=148.9

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----c------CC-cCEE
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----L------IE-VDQI  101 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~------~~-~d~v  101 (297)
                      +|+||||||++|++++++|+++| ++|++++|+.....        ..+++.+.+|+.|..     +      .+ +|.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g-~~V~~~~R~~~~~~--------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v   71 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAAS-VPFLVASRSSSSSA--------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAV   71 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCC-CcEEEEeCCCcccc--------CCCCccccccCCCHHHHHHHHhcccCcCCceeEE
Confidence            58999999999999999999999 99999999764321        135666778887752     2      46 8999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhH
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      +++++...      +       ......+++++|++.|+ |||++||..++..                 .      ..+
T Consensus        72 ~~~~~~~~------~-------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-----------------~------~~~  115 (285)
T TIGR03649        72 YLVAPPIP------D-------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG-----------------G------PAM  115 (285)
T ss_pred             EEeCCCCC------C-------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC-----------------C------chH
Confidence            99875321      0       12345689999999999 8999998654311                 0      012


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhc
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                      ...|.++++   ..+++++++||+++|+.....       .....+.....+. .+.++...++++++|+|++++.++.+
T Consensus       116 ~~~~~~l~~---~~gi~~tilRp~~f~~~~~~~-------~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~  184 (285)
T TIGR03649       116 GQVHAHLDS---LGGVEYTVLRPTWFMENFSEE-------FHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTD  184 (285)
T ss_pred             HHHHHHHHh---ccCCCEEEEeccHHhhhhccc-------ccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcC
Confidence            233444322   148999999999888543110       0112222323333 35678889999999999999999998


Q ss_pred             CC--CccEEecCCCcccHHHHHHHHHHhhcccCceeec
Q 022414          261 EN--TGPINIGNPGEFTMLELAENVKEVNFYLGRLLVC  296 (297)
Q Consensus       261 ~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  296 (297)
                      +.  ++.|++.+++.+|+.|+++.+.+++|.+.+...+
T Consensus       185 ~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~  222 (285)
T TIGR03649       185 KVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKL  222 (285)
T ss_pred             CCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeC
Confidence            65  6789999999999999999999999998765543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.91  E-value=2e-22  Score=201.81  Aligned_cols=253  Identities=19%  Similarity=0.173  Sum_probs=180.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC---CCeEEEEecCCCCCcc--chhhhc---------CCCceEEEecccCCcc---
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE---KNEVIVVDNYFTGSKD--NLRKWI---------GHPRFELIRHDVTEPL---   94 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g---~~~v~~~~r~~~~~~~--~~~~~~---------~~~~~~~~~~Dl~~~~---   94 (297)
                      .++|+|||||||+|+++++.|++++   ..+|+++.|.......  .+....         ...++.++.+|+.+..   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5899999999999999999999875   3789999996432211  111100         0136889999997542   


Q ss_pred             --------cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCC----------
Q 022414           95 --------LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL----------  155 (297)
Q Consensus        95 --------~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~----------  155 (297)
                              ..++|+|||+|+....   ..........|+.++.+++++|++.++ +|+|+||..+|+...          
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~ 1127 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQ 1127 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhh
Confidence                    1369999999986542   234445556899999999999999887 799999999986421          


Q ss_pred             --CCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCC--ChhHHHHHHHHHHcCCC
Q 022414          156 --VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEP  231 (297)
Q Consensus       156 --~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~  231 (297)
                        ...+.|+.+....+..+.+.|+.+|..+|.++..+.+. +++++++||+.|||+.....  ...++..++.....-..
T Consensus      1128 ~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~ 1206 (1389)
T TIGR03443      1128 AGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGL 1206 (1389)
T ss_pred             ccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCC
Confidence              11233332222223334567999999999999887654 89999999999999864332  12345555544433222


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      .   .+....+++++++|+|++++.++.++.    ..+||+.++..+++.++++.+.+. |.+.+
T Consensus      1207 ~---p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~ 1267 (1389)
T TIGR03443      1207 I---PNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVE 1267 (1389)
T ss_pred             c---CCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCC
Confidence            2   334556899999999999999987664    237999998899999999999764 55443

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.91  E-value=9.7e-23  Score=167.68  Aligned_cols=223  Identities=18%  Similarity=0.238  Sum_probs=151.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------cc-CCcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LL-IEVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~-~~~d~vi  102 (297)
                      ..+|+|+||||||++|++++++|+++| ++|+++.|+.......+.   ...+++++++|+++.      .. .++|+||
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKG-FAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI   90 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence            346899999999999999999999999 999999986432211111   123688899999873      12 4799999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR  181 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (297)
                      +++|....    .++...+..|..++.++++++++.++ |+|++||..+|+.....+..+..    ....+...|...|.
T Consensus        91 ~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~----~~~~~~~~~~~~k~  162 (251)
T PLN00141         91 CATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAY----IFLNLFGLTLVAKL  162 (251)
T ss_pred             ECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcch----hHHHHHHHHHHHHH
Confidence            99875421    12223346788899999999999988 89999999998754322211110    01111223445677


Q ss_pred             HHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       182 ~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      .+|++++    ..+++++++||++++++...                +. ..+.........+++.+|+|++++.++..+
T Consensus       163 ~~e~~l~----~~gi~~~iirpg~~~~~~~~----------------~~-~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~  221 (251)
T PLN00141        163 QAEKYIR----KSGINYTIVRPGGLTNDPPT----------------GN-IVMEPEDTLYEGSISRDQVAEVAVEALLCP  221 (251)
T ss_pred             HHHHHHH----hcCCcEEEEECCCccCCCCC----------------ce-EEECCCCccccCcccHHHHHHHHHHHhcCh
Confidence            7777654    35899999999999976421                00 111111111235799999999999999887


Q ss_pred             C--CccEEecCC---CcccHHHHHHHHHH
Q 022414          262 N--TGPINIGNP---GEFTMLELAENVKE  285 (297)
Q Consensus       262 ~--~~~~~i~~~---~~~s~~e~~~~i~~  285 (297)
                      .  ...+.+.+.   ...++.+++..+++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        222 ESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             hhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            6  456777653   23689999888765

>PRK09135 pteridine reductase; Provisional

Probab=99.90  E-value=6.8e-22  Score=162.56  Aligned_cols=217  Identities=14%  Similarity=0.109  Sum_probs=149.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC---CCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~------------   94 (297)
                      .++++|+||||+|+||+++++.|+++| ++|++++|+.....+.+...+.   ...+.++.+|+++..            
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAG-YRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999999 9999999864332222221111   235788899998753            


Q ss_pred             cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc----CCeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ..++|+|||+||......    ..+++...++.|+.++.++++++.+.    +..++.+++....               
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------  147 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE---------------  147 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc---------------
Confidence            125899999999654322    22346678899999999999999642    2245555553211               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       .+..+...|+.+|...|.+++.+..+.  +++++++||+.++||.....   +..........+..+.         .+
T Consensus       148 -~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~  214 (249)
T PRK09135        148 -RPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNS---FDEEARQAILARTPLK---------RI  214 (249)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccccc---CCHHHHHHHHhcCCcC---------CC
Confidence             345566789999999999999988764  58999999999999974221   1112222223322221         12


Q ss_pred             eeHHHHHHHHHHHHhcCC---CccEEecCCCccc
Q 022414          245 CYVSDMVDGLIRLMEGEN---TGPINIGNPGEFT  275 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s  275 (297)
                      .+++|+|++++.++....   +..|+++++..++
T Consensus       215 ~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        215 GTPEDIAEAVRFLLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             cCHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence            358999999976665432   4579999887654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.89  E-value=1.6e-21  Score=161.14  Aligned_cols=249  Identities=19%  Similarity=0.205  Sum_probs=168.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC--ccchhhhc---------CCCceEEEecccCCccc------
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--KDNLRKWI---------GHPRFELIRHDVTEPLL------   95 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~~---------~~~~~~~~~~Dl~~~~~------   95 (297)
                      +++|+||||||+|.+++.+|+.+-..+|+|+.|.....  .+.+.+.+         ...+++.+.+|+..+.+      
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999999998746999999975421  12222222         23588999999986532      


Q ss_pred             -----CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCe-EEEEecceeecCCCCCCCCCC----CCC
Q 022414           96 -----IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLVHPQDES----YWG  165 (297)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-~v~~Ss~~~~~~~~~~~~~e~----~~~  165 (297)
                           ..+|.|||+|+..+   .-.++.+....|+.++..+++.|..-..| ++|+||++++........+++    ...
T Consensus        81 ~~~La~~vD~I~H~gA~Vn---~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~  157 (382)
T COG3320          81 WQELAENVDLIIHNAALVN---HVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT  157 (382)
T ss_pred             HHHHhhhcceEEecchhhc---ccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence                 24999999998764   34566777789999999999999888774 999999999765433222221    111


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCC--CChhHHHHHHHHHHcCCCeEEecC------
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI--DDGRVVSNFIAQAIRGEPLTVQAP------  237 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------  237 (297)
                      ......+.++|+.||+.+|..+++.... |+++.|+|||.|.|+..+.  ....++..++..+.+-...+....      
T Consensus       158 ~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~p  236 (382)
T COG3320         158 RNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLDMLP  236 (382)
T ss_pred             ccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchhhCc
Confidence            1122335578999999999999999877 9999999999999987622  223466677776665443321110      


Q ss_pred             --CceeEeeeeHHHHHHHHHHHHhcCC--CccEE-ecCCCcccHHHHHHHHHH
Q 022414          238 --GTQTRSFCYVSDMVDGLIRLMEGEN--TGPIN-IGNPGEFTMLELAENVKE  285 (297)
Q Consensus       238 --~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~-i~~~~~~s~~e~~~~i~~  285 (297)
                        -........+.-+++++..+..++.  -..|+ ..-|..+...++.+-+.+
T Consensus       237 ~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         237 VDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             cceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence              1111222233334444444443333  22343 344678899998887776

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.5e-21  Score=160.81  Aligned_cols=234  Identities=18%  Similarity=0.097  Sum_probs=163.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~------------   94 (297)
                      +.+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.   ...++.++.+|+.+..            
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAG-AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999 899999986433222111111   1236778899998752            


Q ss_pred             cCCcCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      ..++|++||++|.....     ...++....+++|+.+...+++++.+    .+. +++++||...+.            
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~------------  151 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN------------  151 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC------------
Confidence            12689999999854321     12233566788999999999887754    233 799999987642            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                          +..+.+.|+.+|.+.|.+++.+..+.   ++++++++|+.+.++.......  ............+         .
T Consensus       152 ----~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~---------~  216 (276)
T PRK05875        152 ----THRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE--SPELSADYRACTP---------L  216 (276)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc--CHHHHHHHHcCCC---------C
Confidence                22234679999999999999887664   5899999999887764321100  0111111222111         1


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc----cHHHHHHHHHHhhcccC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF----TMLELAENVKEVNFYLG  291 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~----s~~e~~~~i~~~~g~~~  291 (297)
                      ..+++++|+|+++.++++.+.    +..++++++..+    +..|+++.+.+..|..+
T Consensus       217 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  274 (276)
T PRK05875        217 PRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLRG  274 (276)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHhh
Confidence            236789999999999998765    457899888776    88888888887776654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=2.3e-21  Score=159.25  Aligned_cols=214  Identities=16%  Similarity=0.097  Sum_probs=152.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ++|+|+||||||++|+++++.|+++| ++|+++.|......+.+.....  ..++.++.+|+.+..            ..
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAG-ADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 8888877764433222222211  245888999998763            13


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|+|||++|......    ..+.+...++.|+.+..++++.+    ++.+. ++|++||...+..              
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~--------------  149 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG--------------  149 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC--------------
Confidence            6899999999654433    23345677889999999998887    45566 8999999876522              


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                        ......|..+|.+.+.+++.++.+   .+++++++||+.++++.....   ........   ....       ....+
T Consensus       150 --~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~---~~~~~~~~---~~~~-------~~~~~  214 (249)
T PRK12825        150 --WPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT---IEEAREAK---DAET-------PLGRS  214 (249)
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc---cchhHHhh---hccC-------CCCCC
Confidence              223467999999999999877665   589999999999999874321   11111111   0011       11238


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      ++.+|+++++..++++..    +..|+++++..+
T Consensus       215 ~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        215 GTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             cCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            899999999999997653    557888877543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.89  E-value=8.2e-22  Score=152.47  Aligned_cols=248  Identities=19%  Similarity=0.207  Sum_probs=193.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhhcCC------CceEEEecccCCcc-------cC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIGH------PRFELIRHDVTEPL-------LI   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~------~~~~~~~~Dl~~~~-------~~   96 (297)
                      ..+..||||-||+=|+.|++.|+.+| ++|.++.|....- ....+.+...      ....+..+|++|..       ..
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~Kg-YeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKG-YEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCC-ceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            35679999999999999999999999 9999988876542 2333333322      24567889999873       34


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC----CeEEEEecceeecCCCCCCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG----ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  172 (297)
                      +++-|+|+|+......+.+-++.+.++...++++|+++.+.++    +||...||...||.....|..|.     +|+.|
T Consensus       106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~-----TPFyP  180 (376)
T KOG1372|consen  106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSET-----TPFYP  180 (376)
T ss_pred             CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccC-----CCCCC
Confidence            7999999999877766667777777888899999999998876    48999999999999888888888     79999


Q ss_pred             CChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCC-ChhHHHHHHH----HHHc--CCCeEEecCCceeEeee
Q 022414          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID-DGRVVSNFIA----QAIR--GEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~-~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~i  245 (297)
                      +++|+.+|..+-..+.++...+++   ...-|.+|-- .++. +.+|+..-+-    .+.-  ...+.+ |+-+..+||.
T Consensus       181 RSPYa~aKmy~~WivvNyREAYnm---fAcNGILFNH-ESPRRGenFVTRKItRsvakI~~gqqe~~~L-GNL~a~RDWG  255 (376)
T KOG1372|consen  181 RSPYAAAKMYGYWIVVNYREAYNM---FACNGILFNH-ESPRRGENFVTRKITRSVAKISLGQQEKIEL-GNLSALRDWG  255 (376)
T ss_pred             CChhHHhhhhheEEEEEhHHhhcc---eeeccEeecC-CCCccccchhhHHHHHHHHHhhhcceeeEEe-cchhhhcccc
Confidence            999999999999888887777654   2233444422 1221 2345544333    2222  223443 8888999999


Q ss_pred             eHHHHHHHHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          246 YVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      |..|.+++|+.++++....-|.++.|+..|.+||++.....+|+
T Consensus       256 hA~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~  299 (376)
T KOG1372|consen  256 HAGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGE  299 (376)
T ss_pred             hhHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCc
Confidence            99999999999999999999999999999999999998888874

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-21  Score=162.00  Aligned_cols=217  Identities=15%  Similarity=0.041  Sum_probs=148.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      .++++++||||+|+||+++++.|+++| ++|++++|+.....+....... ...+.++++|+++...            .
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAG-AAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            346899999999999999999999999 8999999975333222222211 1357788999987631            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHH----HHHHHHHH-HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIG----TLNMLGLA-KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|+||||+|......    ..+.....+++|+.+    +..+++++ ++.+. ++|++||...+.              
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~--------------  149 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE--------------  149 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC--------------
Confidence            4899999999754322    223355667789998    56666666 66666 899999975432              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhH-------HHHHHHHHHcCCCeEEec
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRV-------VSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~  236 (297)
                        +..+...|+.+|...+.+++.++++   .+++++++||+.++++.........       .......++        .
T Consensus       150 --~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  219 (262)
T PRK13394        150 --ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVM--------L  219 (262)
T ss_pred             --CCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHH--------h
Confidence              1223356999999999998888765   4799999999999987521100000       001111111        1


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      .+....++++++|++++++.++..+.    +..|+++++
T Consensus       220 ~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        220 GKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence            23334679999999999999998653    345666665

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.89  E-value=7.7e-22  Score=154.63  Aligned_cols=176  Identities=28%  Similarity=0.425  Sum_probs=132.9

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccCCCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLACPAS  109 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~~~~  109 (297)
                      |+|+||||++|+.++++|+++| ++|+++.|+..+..+       ..+++++++|+.+.     .+.++|+||++++...
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~-~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRG-HEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCC-CEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhc
Confidence            7999999999999999999999 999999997543222       46899999999887     3558999999997543


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHH
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~  188 (297)
                      .             ......++++++++.++ |++++|+.+++...........      . .....|...|...|+.++
T Consensus        73 ~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~e~~~~  132 (183)
T PF13460_consen   73 K-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDED------K-PIFPEYARDKREAEEALR  132 (183)
T ss_dssp             T-------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGT------C-GGGHHHHHHHHHHHHHHH
T ss_pred             c-------------cccccccccccccccccccceeeeccccCCCCCccccccc------c-cchhhhHHHHHHHHHHHH
Confidence            2             16678899999999999 8999999998874422111110      0 011457888888887763


Q ss_pred             HHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEe-cCCceeEeeeeHHHHHHHHHHHHhc
Q 022414          189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ-APGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       189 ~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                          +.+++|+++||+.+||+....                  ..+. ..+....++++.+|+|++++.++++
T Consensus       133 ----~~~~~~~ivrp~~~~~~~~~~------------------~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  133 ----ESGLNWTIVRPGWIYGNPSRS------------------YRLIKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             ----HSTSEEEEEEESEEEBTTSSS------------------EEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             ----hcCCCEEEEECcEeEeCCCcc------------------eeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence                458999999999999986321                  1111 1334445899999999999999874

...

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.1e-21  Score=160.28  Aligned_cols=232  Identities=14%  Similarity=0.110  Sum_probs=161.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~~   98 (297)
                      ++++|+||||+|+||+++++.|+++| ++|++++|+.....+ +.... ...+.++++|+++...            .++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g-~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERG-DRVVATARDTATLAD-LAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHH-HHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999 999999986432211 11111 2357788999987521            368


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+..                
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------  142 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA----------------  142 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC----------------
Confidence            99999999765432    23456678899999988877775    55555 8999999776532                


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC-----ChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID-----DGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                      ......|+.+|.+.+.+.+.+..+   .+++++++||+.+..+.....     .......+...+...         ...
T Consensus       143 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  213 (275)
T PRK08263        143 FPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ---------WSE  213 (275)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH---------HHh
Confidence            223356999999999998888764   689999999998877653210     000111111111111         111


Q ss_pred             Eee-eeHHHHHHHHHHHHhcCC-CccEEecC-CCcccHHHHHHHHHHhhccc
Q 022414          242 RSF-CYVSDMVDGLIRLMEGEN-TGPINIGN-PGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       242 ~~~-i~v~Dva~~~~~~~~~~~-~~~~~i~~-~~~~s~~e~~~~i~~~~g~~  290 (297)
                      ..+ +.++|+|++++.+++.+. .+.|++.+ ++.+++.++.+.+.+.-+.+
T Consensus       214 ~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (275)
T PRK08263        214 RSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEEWE  265 (275)
T ss_pred             ccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHHHH
Confidence            234 789999999999999876 44555544 36789999999998875554

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-21  Score=161.16  Aligned_cols=225  Identities=15%  Similarity=0.113  Sum_probs=153.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++++++||||+|+||.++++.|+++| ++|++++|+.....+ +.... ...+.++.+|+++..            ..+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G-~~v~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEG-ARVVIADIKPARARL-AALEI-GPAAIAVSLDVTRQDSIDRIVAAAVERFGG   80 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEcCCHHHHHH-HHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999 999999986433222 11112 235788899998762            136


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc------CCeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV------GARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +|++||++|......    ..+++...+++|+.++..+++++.+.      +.++|++||....                
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~----------------  144 (257)
T PRK07067         81 IDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR----------------  144 (257)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC----------------
Confidence            899999998654322    23456677899999999999998542      2479999996432                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      .+..+...|+.+|.+.+.+.+.++.+   .+++++.++|+.++++..... ......... ...+.....++.......+
T Consensus       145 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  222 (257)
T PRK07067        145 RGEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQV-DALFARYEN-RPPGEKKRLVGEAVPLGRM  222 (257)
T ss_pred             CCCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhh-hhhhhhccC-CCHHHHHHHHhhcCCCCCc
Confidence            12224467999999999999888764   579999999999998753211 000100000 0000000011222234568


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      ++++|+|+++++++..+.    +..|++++|+.++
T Consensus       223 ~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        223 GVPDDLTGMALFLASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             cCHHHHHHHHHHHhCcccccccCcEEeecCCEeCC
Confidence            899999999999998754    4688998876543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.88  E-value=9.3e-21  Score=155.98  Aligned_cols=214  Identities=18%  Similarity=0.106  Sum_probs=149.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ++|+|+||||+|++|+++++.|+++| ++|++++|+............. ...+.++.+|+.+..            ...
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADG-AEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 9999999974322222111111 134888999998752            126


Q ss_pred             cCEEEEccCCCCCc----ccccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|+|||++|.....    ...+++...++.|+.++..+++++.    +.+. ++|++||...+.               .
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~---------------~  148 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR---------------V  148 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc---------------c
Confidence            89999999876542    2234456778999999999988873    4455 799999986641               1


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|+.+|.+.+.+++.+..+   .++++.++||+.++|+.........   +........++         ..++
T Consensus       149 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~~~~~~~~~---------~~~~  216 (251)
T PRK12826        149 GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ---WAEAIAAAIPL---------GRLG  216 (251)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH---HHHHHHhcCCC---------CCCc
Confidence            2223457999999999999887765   4799999999999998642221111   11112222111         1478


Q ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      +++|+|++++.++..+.    +..|++.+|.
T Consensus       217 ~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        217 EPEDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            99999999999887653    4567776653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.87  E-value=6.7e-21  Score=157.22  Aligned_cols=217  Identities=20%  Similarity=0.150  Sum_probs=147.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCcc------------cCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      +++++||||+|+||+++++.|+++| ++|++++|+...... +...+  ...++.++++|+.+..            ..+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g-~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAG-ANVVVNDLGEAGAEA-AAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999 899999996432221 22211  1236888999998863            235


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|+|||+++......    ...+....++.|+.++..+++.+    ++.++ ++|++||...+..               
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~---------------  143 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA---------------  143 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC---------------
Confidence            899999998754322    12334556788999888887776    55666 8999998765432               


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeE-----EecCCce
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLT-----VQAPGTQ  240 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  240 (297)
                       ......|..+|.+.+.+.+.+..+   .+++++++||+.++++..    ...+......  .+....     ....+..
T Consensus       144 -~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  216 (255)
T TIGR01963       144 -SPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLV----EKQIADQAKT--RGIPEEQVIREVMLPGQP  216 (255)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH----HHHHHhhhcc--cCCCchHHHHHHHHccCc
Confidence             112356999999999998877654   379999999999998741    1111111000  000000     0112334


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      .+++++++|+|++++++++.+.    ++.|+++++.
T Consensus       217 ~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       217 TKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGW  252 (255)
T ss_pred             cccCcCHHHHHHHHHHHcCccccCccceEEEEcCcc
Confidence            5679999999999999997642    3468887654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.5e-20  Score=155.41  Aligned_cols=216  Identities=13%  Similarity=0.069  Sum_probs=146.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      +.+++++||||+|+||+++++.|+++| ++|+++.|+.....+...... ....+.++.+|+++..            ..
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAG-FPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            446899999999999999999999999 899998886432221111111 1235778889998763            22


Q ss_pred             CcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||+||.......    .+++...+++|+.++.++++.+.    +.+. +||++||...+..              
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~--------------  152 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ--------------  152 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC--------------
Confidence            58999999997543222    23345667899999999988864    3334 7999999876532              


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                        ......|+.+|.+.|.+++.+..+.   +++++++|||.+.++............++.......       ......+
T Consensus       153 --~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  223 (274)
T PRK07775        153 --RPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG-------QARHDYF  223 (274)
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc-------ccccccc
Confidence              2223569999999999999887654   899999999887654311111111222222211111       1112458


Q ss_pred             eeHHHHHHHHHHHHhcCCC-ccEEec
Q 022414          245 CYVSDMVDGLIRLMEGENT-GPINIG  269 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~~-~~~~i~  269 (297)
                      ++++|+|++++.+++++.+ ..||+.
T Consensus       224 ~~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        224 LRASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             cCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence            9999999999999988763 356664

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.7e-21  Score=158.47  Aligned_cols=223  Identities=15%  Similarity=0.108  Sum_probs=151.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCccc-----------C
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL-----------I   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~-----------~   96 (297)
                      ++++++||||+|++|+++++.|+++| ++|++++|+.....+......   ...++.++.+|+++...           .
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKG-YLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcC
Confidence            35789999999999999999999999 999999986433222111111   12368889999988632           2


Q ss_pred             CcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||+|.......    .++....+++|+.++..+++.+    ++.+. ++|++||.....               
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~---------------  145 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV---------------  145 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC---------------
Confidence            57999999987654322    2345567889999988888775    55555 899999865431               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHH---HhCCcEEEEeeccccCCCCCCCC---------hhHHHHHHHHHHcCCCeEEe
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPRMNIDD---------GRVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ivrp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  235 (297)
                       +..+...|+.+|...+.+++.++.   ..+++++++||+.++++......         .......+..+.....    
T Consensus       146 -~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  220 (280)
T PRK06914        146 -GFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHIN----  220 (280)
T ss_pred             -CCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHh----
Confidence             222346799999999999888763   35899999999999887432110         0001111111111000    


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC-CccEEecCCCcccHH
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTML  277 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~  277 (297)
                         .....+++++|+|++++.+++++. ...|+++++..+++.
T Consensus       221 ---~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (280)
T PRK06914        221 ---SGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL  260 (280)
T ss_pred             ---hhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence               112357889999999999999887 446777766655444

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.87  E-value=1.4e-20  Score=166.26  Aligned_cols=222  Identities=14%  Similarity=0.093  Sum_probs=150.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc----------CCCceEEEecccCCcc-----c
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----------GHPRFELIRHDVTEPL-----L   95 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~-----~   95 (297)
                      .+++|+||||+|+||++++++|++.| ++|+++.|+..........+.          ...++.++.+|+.+..     +
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G-~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            46899999999999999999999999 999999996543221111110          0135788999998753     4


Q ss_pred             CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~  174 (297)
                      .++|+|||++|....  ...+....+++|+.++.+++++|++.++ |||++||.+.+...    ....      ......
T Consensus       158 ggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~~------~~~sk~  225 (576)
T PLN03209        158 GNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPAA------ILNLFW  225 (576)
T ss_pred             cCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----cccc------chhhHH
Confidence            579999999986532  1123456678999999999999999998 89999998753111    0000      112334


Q ss_pred             hHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      .|..+|..+|..+.    ..+++++++|||+++++.......             ..+............+..+|||+++
T Consensus       226 ~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t-------------~~v~~~~~d~~~gr~isreDVA~vV  288 (576)
T PLN03209        226 GVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET-------------HNLTLSEEDTLFGGQVSNLQVAELM  288 (576)
T ss_pred             HHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccccc-------------cceeeccccccCCCccCHHHHHHHH
Confidence            57778888888774    368999999999998874321100             1111111111112357899999999


Q ss_pred             HHHHhcCC---CccEEecCCCc---ccHHHHHHH
Q 022414          255 IRLMEGEN---TGPINIGNPGE---FTMLELAEN  282 (297)
Q Consensus       255 ~~~~~~~~---~~~~~i~~~~~---~s~~e~~~~  282 (297)
                      ++++.++.   ..++.+.++..   ..+.++++.
T Consensus       289 vfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~  322 (576)
T PLN03209        289 ACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAK  322 (576)
T ss_pred             HHHHcCchhccceEEEEEeCCCCCCCCHHHHHHh
Confidence            99998664   56788877653   345555443

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=3.5e-20  Score=153.00  Aligned_cols=219  Identities=16%  Similarity=0.082  Sum_probs=151.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~   95 (297)
                      ...+++++||||+|+||+++++.|+++| ++|++++|+.....+....+-. ..++.++++|+++..            .
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAG-AEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3567999999999999999999999999 8999999864332221111111 124778899998752            2


Q ss_pred             CCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHHc----CC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ..+|++||++|.......    .++.+..+.+|+.++..+++++.+.    +. ++|++||....               
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~---------------  150 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA---------------  150 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc---------------
Confidence            358999999997643322    2334567789999999999888653    44 89999987543               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                       .+......|+.+|.+.+.+++.++.+   .+++++.++|+.+.++.......  ...+...+....+         ...
T Consensus       151 -~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~--~~~~~~~~~~~~~---------~~~  218 (255)
T PRK07523        151 -LARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA--DPEFSAWLEKRTP---------AGR  218 (255)
T ss_pred             -cCCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc--CHHHHHHHHhcCC---------CCC
Confidence             12234467999999999999888763   58999999999998875211000  0111122222221         124


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      +..++|+|+++++++....    +..+++.+|..+|
T Consensus       219 ~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        219 WGKVEELVGACVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence            6789999999999997644    3467887765443

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.87  E-value=4e-20  Score=153.10  Aligned_cols=213  Identities=15%  Similarity=0.118  Sum_probs=144.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-C-CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G-HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+..  .+.....+ . ...+.++.+|+++..            .
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G-~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEG-ARVVLVDRSEL--VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCchH--HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 99999998632  11111111 1 235778899998752            2


Q ss_pred             CCcCEEEEccCCCCC-c----ccccChhhhHHHhHHHHHHHHHH----HHHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      .++|++||+||.... .    ...++....++.|+.+...+++.    +++.+. ++|++||...++.            
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------  150 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------  150 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------
Confidence            368999999985321 1    12334556678888877655544    445565 8999999876531            


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCC---------CCChhHHHHHHHHHHcCCCeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMN---------IDDGRVVSNFIAQAIRGEPLT  233 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~  233 (297)
                            ....|+.+|.+.+.+.+.++.+.   +++++.++|+.+++|...         .........+......+.++.
T Consensus       151 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (260)
T PRK12823        151 ------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK  224 (260)
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc
Confidence                  11359999999999999988764   899999999999997410         001112333333333333322


Q ss_pred             EecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       234 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                               .+.+++|+|+++++++....    +..+++.+|+
T Consensus       225 ---------~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        225 ---------RYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             ---------cCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence                     24578999999999987653    3467776653

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.86  E-value=1.7e-20  Score=155.11  Aligned_cols=218  Identities=17%  Similarity=0.093  Sum_probs=145.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc------------CC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      .+++++||||+|+||+++++.|+++| ++|++++|+.....+...... ...++..+.+|+++...            .+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEG-AKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 999999997543322222111 12467889999987631            25


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHH----HHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNM----LGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l----~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|+|||++|.......    ..+....++.|+.++..+    +.++++.+. +||++||...+.                
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~----------------  145 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV----------------  145 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc----------------
Confidence            8999999986544322    223445677888885444    444555666 899999976542                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCe-----EEecCCce
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL-----TVQAPGTQ  240 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  240 (297)
                      +....+.|+.+|.+.+.+.+.+..+   .++.+.+++|+.+++|....    .+......  .+...     ..+.....
T Consensus       146 ~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~  219 (258)
T PRK12429        146 GSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK----QIPDLAKE--RGISEEEVLEDVLLPLVP  219 (258)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh----hhhhhccc--cCCChHHHHHHHHhccCC
Confidence            2223467999999999998887655   36999999999999876321    11110000  00000     00011122


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      ...+++++|+|++++.++..+.    +..|++++|
T Consensus       220 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        220 QKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             ccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            3569999999999999987643    345677664

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=4.1e-20  Score=152.14  Aligned_cols=217  Identities=15%  Similarity=0.076  Sum_probs=147.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+++++||||+|+||+++++.|+++| ++|++++|+.....+....+.....+.++.+|+.+...            .+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEG-ARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999 89999999754322222211112357889999987622            25


Q ss_pred             cCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +|+|||++|......     ..+++.+.++.|+.++..+++.+.+    .+. +||++||...+.               
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------  146 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR---------------  146 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC---------------
Confidence            899999998643221     2344566788999887777766643    455 799999987653               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +..+...|+.+|...+.+++.++.+   .+++++.++|+.+.++.....................         ....+
T Consensus       147 -~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  216 (251)
T PRK07231        147 -PRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI---------PLGRL  216 (251)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC---------CCCCC
Confidence             2333467999999999999888765   3799999999998765421100000001111122211         11246


Q ss_pred             eeHHHHHHHHHHHHhcCC---Ccc-EEecCCC
Q 022414          245 CYVSDMVDGLIRLMEGEN---TGP-INIGNPG  272 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~---~~~-~~i~~~~  272 (297)
                      ++++|+|++++.++..+.   +|. +.+.++.
T Consensus       217 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        217 GTPEDIANAALFLASDEASWITGVTLVVDGGR  248 (251)
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCeEEECCCc
Confidence            899999999999997654   454 5665543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.86  E-value=4.4e-21  Score=156.13  Aligned_cols=218  Identities=20%  Similarity=0.196  Sum_probs=149.5

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccCCCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLACPAS  109 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~~~~  109 (297)
                      |+|+||||.+|+++++.|++.+ ++|+++.|+..   ......+...+++++.+|+.+.     .+.++|+||++.+...
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~-~~V~~l~R~~~---~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAG-FSVRALVRDPS---SDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT-GCEEEEESSSH---HHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred             CEEECCccHHHHHHHHHHHhCC-CCcEEEEeccc---hhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence            7999999999999999999988 99999999752   2222223335788899999876     4679999998876442


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHH
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~  188 (297)
                                  ........+++++|++.|+ +||+ ||...-..       +.     ....|.......|...|+.++
T Consensus        77 ------------~~~~~~~~~li~Aa~~agVk~~v~-ss~~~~~~-------~~-----~~~~p~~~~~~~k~~ie~~l~  131 (233)
T PF05368_consen   77 ------------PSELEQQKNLIDAAKAAGVKHFVP-SSFGADYD-------ES-----SGSEPEIPHFDQKAEIEEYLR  131 (233)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHT-SEEEE-SEESSGTT-------TT-----TTSTTHHHHHHHHHHHHHHHH
T ss_pred             ------------hhhhhhhhhHHHhhhccccceEEE-EEeccccc-------cc-----ccccccchhhhhhhhhhhhhh
Confidence                        1134567899999999999 5664 55332110       00     122222335567777777764


Q ss_pred             HHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHH-HHcCC--CeEEecCCceeEeee-eHHHHHHHHHHHHhcCC-C
Q 022414          189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQ-AIRGE--PLTVQAPGTQTRSFC-YVSDMVDGLIRLMEGEN-T  263 (297)
Q Consensus       189 ~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~i-~v~Dva~~~~~~~~~~~-~  263 (297)
                      +    .+++++++||++.+..        +...+... ...+.  ...+.++++....++ ..+|++++++.++.++. .
T Consensus       132 ~----~~i~~t~i~~g~f~e~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~  199 (233)
T PF05368_consen  132 E----SGIPYTIIRPGFFMEN--------LLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH  199 (233)
T ss_dssp             H----CTSEBEEEEE-EEHHH--------HHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT
T ss_pred             h----ccccceeccccchhhh--------hhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHh
Confidence            4    4899999999876532        11111110 11221  356777877666665 99999999999999976 3


Q ss_pred             ---ccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          264 ---GPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       264 ---~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                         ..+++++ +.+|+.|+++.+.+.+|.+.+..
T Consensus       200 ~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v~y~  232 (233)
T PF05368_consen  200 NNGKTIFLAG-ETLTYNEIAAILSKVLGKKVKYV  232 (233)
T ss_dssp             TEEEEEEEGG-GEEEHHHHHHHHHHHHTSEEEEE
T ss_pred             cCCEEEEeCC-CCCCHHHHHHHHHHHHCCccEEe
Confidence               3556655 88999999999999999987654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.6e-20  Score=152.47  Aligned_cols=226  Identities=14%  Similarity=0.078  Sum_probs=156.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~~d   99 (297)
                      +++++||||+|+||+++++.|+++| ++|++++|+.....+ +.+.+...++..+++|+.+...            .++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g-~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAG-DRVLALDIDAAALAA-FADALGDARFVPVACDLTDAASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999 899999986433222 2222223467888999987631            2589


Q ss_pred             EEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       100 ~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      ++||++|.......    .+.....+..|+.+...+++++    ++.+. +++++||...+..                 
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------  142 (257)
T PRK07074         80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-----------------  142 (257)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-----------------
Confidence            99999987543221    1223445678999888888777    33455 7999998653210                 


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      .....|+.+|.+.+.+++.++++.   +++++.++|+.++++....... ....+.......         ....+++++
T Consensus       143 ~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~  212 (257)
T PRK07074        143 LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA-ANPQVFEELKKW---------YPLQDFATP  212 (257)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc-cChHHHHHHHhc---------CCCCCCCCH
Confidence            012359999999999999988654   6999999999998875321100 011222222111         112468999


Q ss_pred             HHHHHHHHHHHhcCC---Cc-cEEecCCCcccHHHHHHHHHHh
Q 022414          248 SDMVDGLIRLMEGEN---TG-PINIGNPGEFTMLELAENVKEV  286 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~---~~-~~~i~~~~~~s~~e~~~~i~~~  286 (297)
                      +|++++++.++....   .| .+++.+|.....+|+.+.+.+.
T Consensus       213 ~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~  255 (257)
T PRK07074        213 DDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTLE  255 (257)
T ss_pred             HHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence            999999999997542   34 5678888888899999887653

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.3e-20  Score=155.89  Aligned_cols=219  Identities=12%  Similarity=0.031  Sum_probs=147.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~~   98 (297)
                      .+++++||||+|+||+++++.|+++| ++|++++|+..... .+.... ..++..+.+|+++...            .++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~-~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAG-HRVVGTVRSEAARA-DFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCc-CEEEEEeCCHHHHH-HHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            35889999999999999999999999 99999999643211 111111 2357788999987632            258


Q ss_pred             CEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |+|||+||........    ++....+++|+.++.++++++.    +.+. ++|++||...+.                +
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~----------------~  143 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI----------------T  143 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC----------------C
Confidence            9999999975433222    2345668999999999998853    3444 899999976542                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC---hhHHH---HHHHHHHcCCCeEEecCCce
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD---GRVVS---NFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~  240 (297)
                      ..+...|+.+|...|.+++.++.+   .++++++++|+.+.++......   .....   ............   ..+  
T Consensus       144 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--  218 (277)
T PRK06180        144 MPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREA---KSG--  218 (277)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHh---hcc--
Confidence            234467999999999999888765   4899999999999876422110   00011   111111110000   011  


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCCCccEEecCCCcc
Q 022414          241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEF  274 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~~~~~~i~~~~~~  274 (297)
                       ..+..++|+|++++.+++.+....+++.+++..
T Consensus       219 -~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~~~  251 (277)
T PRK06180        219 -KQPGDPAKAAQAILAAVESDEPPLHLLLGSDAL  251 (277)
T ss_pred             -CCCCCHHHHHHHHHHHHcCCCCCeeEeccHHHH
Confidence             235679999999999999877555555554443

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.86  E-value=9.7e-21  Score=156.02  Aligned_cols=216  Identities=17%  Similarity=0.118  Sum_probs=146.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      .++++++||||+|+||+++++.|+++| ++|+++.|+.....+..........+.++++|+++...            .+
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREG-ARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCC-CeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999 99999998754322222222123457889999988621            36


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|+|||++|......    ..+++...++.|+.++..+.+.+    ++.+. +++++||.....                
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~----------------  145 (252)
T PRK06138         82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA----------------  145 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc----------------
Confidence            899999999754322    22335566889999887766655    45565 899999976532                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhH-HHHHHHHHHcCCCeEEecCCceeEee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRV-VSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      +......|+.+|.+.+.+++.+..+.   +++++.++|+.++++......... .+..........        .....+
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  217 (252)
T PRK06138        146 GGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNRF  217 (252)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCCC
Confidence            11223569999999999999887654   799999999999887531100000 001111111111        011236


Q ss_pred             eeHHHHHHHHHHHHhcCC---Ccc-EEecC
Q 022414          245 CYVSDMVDGLIRLMEGEN---TGP-INIGN  270 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~---~~~-~~i~~  270 (297)
                      ++++|+|++++.++.++.   .|. +.+.+
T Consensus       218 ~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  247 (252)
T PRK06138        218 GTAEEVAQAALFLASDESSFATGTTLVVDG  247 (252)
T ss_pred             cCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            789999999999998865   454 44444

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=4.4e-20  Score=152.49  Aligned_cols=214  Identities=14%  Similarity=0.064  Sum_probs=148.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      +|+++||||+|+||+++++.|.++| ++|++++|......+.....+.  ..++.++.+|+++..            ..+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAG-FDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999 8999998864322222222211  235788999999852            136


Q ss_pred             cCEEEEccCCCCCcc------cccChhhhHHHhHHHHHHHHHHHHHc-----C-----C-eEEEEecceeecCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKRV-----G-----A-RILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-----~-----~-r~v~~Ss~~~~~~~~~~~~~  160 (297)
                      +|++||++|......      ..+++...+++|+.++..+++++.+.     +     . +++++||...+.        
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--------  152 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--------  152 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc--------
Confidence            899999998754221      22446667899999999998887542     1     3 699999977642        


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                              +..+.+.|+.+|.+.+.+++.++.+   .++++++++|+.+.++....    +...+......+ ..+    
T Consensus       153 --------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~----~~~~~~~~~~~~-~~~----  215 (256)
T PRK12745        153 --------VSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP----VTAKYDALIAKG-LVP----  215 (256)
T ss_pred             --------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc----cchhHHhhhhhc-CCC----
Confidence                    1223356999999999999988764   58999999999998865321    112221211111 111    


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                         ...+.+++|+|+++..++....    +..|++.++..+
T Consensus       216 ---~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        216 ---MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             ---cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence               1247799999999999886542    447888776443

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2.3e-20  Score=153.73  Aligned_cols=219  Identities=12%  Similarity=-0.030  Sum_probs=148.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc-hhhhcC-CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-LRKWIG-HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+++|+||||+|+||++++++|+++| ++|++..|+....... ...... ...+.++.+|+++..            .
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEG-SLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999 8888777643221111 111111 124667889998752            2


Q ss_pred             CCcCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      .++|+|||+||........    +.....+++|+.+...+++++.+.   +.++|++||...+.                
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------  146 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR----------------  146 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC----------------
Confidence            3689999999975433222    223467889999999988888653   23799999987652                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      +..+.+.|+.+|...+.+++.++.+.  ++.+.+++|+.+.++..... ..............  .      .....+++
T Consensus       147 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~-~~~~~~~~~~~~~~--~------~~~~~~~~  217 (252)
T PRK06077        147 PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESL-FKVLGMSEKEFAEK--F------TLMGKILD  217 (252)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhh-hhcccccHHHHHHh--c------CcCCCCCC
Confidence            34455779999999999999988765  68999999999977642100 00000000011110  0      11235899


Q ss_pred             HHHHHHHHHHHHhcCC--CccEEecCCCcc
Q 022414          247 VSDMVDGLIRLMEGEN--TGPINIGNPGEF  274 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~--~~~~~i~~~~~~  274 (297)
                      ++|+|++++.+++.+.  ++.|++++|..+
T Consensus       218 ~~dva~~~~~~~~~~~~~g~~~~i~~g~~~  247 (252)
T PRK06077        218 PEEVAEFVAAILKIESITGQVFVLDSGESL  247 (252)
T ss_pred             HHHHHHHHHHHhCccccCCCeEEecCCeec
Confidence            9999999999997654  568898887543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.86  E-value=8.2e-20  Score=149.83  Aligned_cols=214  Identities=14%  Similarity=0.090  Sum_probs=148.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ++++|+|+||||+|++|+++++.|+++| ++|++++|+............ ...++.++.+|+.+..            .
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADG-AKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3456899999999999999999999999 889999997533221111111 1235778889998763            1


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ..+|+|||++|......    ..++..+.++.|+.+..++++++.    +.+. ++|++||.....              
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~--------------  146 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT--------------  146 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc--------------
Confidence            24799999998754322    223345678899999999988884    4565 899999875431              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +..+...|..+|.+.+.+.+.+.++   .++++.++||+.++++....    +............+         ...
T Consensus       147 --~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~----~~~~~~~~~~~~~~---------~~~  211 (246)
T PRK05653        147 --GNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG----LPEEVKAEILKEIP---------LGR  211 (246)
T ss_pred             --CCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh----hhHHHHHHHHhcCC---------CCC
Confidence              1223456999999999998887754   47999999999999886311    11112122222111         135


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      +++++|+|+++.+++....    +..|++++|.
T Consensus       212 ~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        212 LGQPEEVANAVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            7889999999999987643    3467777654

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.2e-20  Score=152.72  Aligned_cols=213  Identities=19%  Similarity=0.168  Sum_probs=150.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-C-CCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G-HPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~------------   95 (297)
                      .++|+++||||+|+||+++++.|+++| ++|++++|+...... +...+ . ...+.++.+|+++...            
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g-~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREG-ASVVVADINAEGAER-VAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            357999999999999999999999999 999999996432221 21211 1 2356788999997632            


Q ss_pred             CCcCEEEEccCCCCC-------cccccChhhhHHHhHHHHHHHHHHHHHc----C-CeEEEEecceeecCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASP-------IFYKYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      .++|+|||+||....       ....+++...+++|+.++.++++++.+.    + .++|++||...+.           
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------  150 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-----------  150 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-----------
Confidence            258999999996531       1123445567889999999999888653    2 3899999987652           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                              +.+.|+.+|.+.|.+++.+.++.   ++.+.+++|+.+..+.....   ....+......+.+..       
T Consensus       151 --------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~~~~~~~~~~~~~~~-------  212 (250)
T PRK07774        151 --------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV---TPKEFVADMVKGIPLS-------  212 (250)
T ss_pred             --------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc---CCHHHHHHHHhcCCCC-------
Confidence                    12469999999999999988764   69999999998877653211   1112333333333221       


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                        .+.+++|+|++++.++....    ++.|++.+++.++
T Consensus       213 --~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        213 --RMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             --CCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeecc
Confidence              14578999999999987642    4578888876543

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.3e-19  Score=150.98  Aligned_cols=235  Identities=12%  Similarity=0.025  Sum_probs=155.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      +++++++||||+|+||+++++.|+++| ++|++.+|+.....+....+.. ...+.++.+|+++...            .
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G-~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRG-ARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999 8999998864332222211111 1257788999987621            2


Q ss_pred             CcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHH----HcC--CeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||+||.......    .++....+++|+.++..+++++.    +.+  .++|++||...+.              
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~--------------  148 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV--------------  148 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc--------------
Confidence            58999999997543322    23355678999999999888874    344  3799999987652              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +..+...|+.+|.+.+.+.+.+..+   .++++.+++|+.+.++....    ..................+......+
T Consensus       149 --~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (275)
T PRK05876        149 --PNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN----SERIRGAACAQSSTTGSPGPLPLQDD  222 (275)
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc----hhhhcCcccccccccccccccccccc
Confidence              3334567999999877777666644   47999999999988764211    00000000000011112233334567


Q ss_pred             eeeHHHHHHHHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          244 FCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      +++++|+|+.++.++.++  ..|.+.  ....+.++.....+....
T Consensus       223 ~~~~~dva~~~~~ai~~~--~~~~~~--~~~~~~~~~~~~~~~~~~  264 (275)
T PRK05876        223 NLGVDDIAQLTADAILAN--RLYVLP--HAASRASIRRRFERIDRT  264 (275)
T ss_pred             CCCHHHHHHHHHHHHHcC--CeEEec--ChhhHHHHHHHHHHHHHh
Confidence            899999999999999875  334443  345566666666655443

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1e-19  Score=150.39  Aligned_cols=215  Identities=14%  Similarity=0.124  Sum_probs=147.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~------------   95 (297)
                      ..+|+|+||||+|+||+++++.|+++| ++|++++|+.....+ +...+.  ...+.++.+|+++...            
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAG-ADVVLAARTAERLDE-VAAEIDDLGRRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcC-CEEEEEeCCHHHHHH-HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 999999986533222 222221  2357889999987621            


Q ss_pred             CCcCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHHHHc----CCeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++||+||.....     ...+++...++.|+.++..+++++.+.    +-++|++||...+.              
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~--------------  146 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH--------------  146 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc--------------
Confidence            3689999999864331     123456678899999999999998652    23799999976532              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChh-------HHHHHHHHHHcCCCeEEec
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGR-------VVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~  236 (297)
                        +..+...|+.+|...+.+++.++.+   .+++++.++|+.++++........       -............      
T Consensus       147 --~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  218 (258)
T PRK07890        147 --SQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS------  218 (258)
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC------
Confidence              2233467999999999999988865   379999999999999852110000       0011111111111      


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                         ....+.+++|+|++++.+++...   .| .+.+.++
T Consensus       219 ---~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg  254 (258)
T PRK07890        219 ---DLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCG  254 (258)
T ss_pred             ---CccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence               11246789999999999987532   33 4455544

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.2e-19  Score=149.76  Aligned_cols=215  Identities=17%  Similarity=0.138  Sum_probs=150.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------   94 (297)
                      ..++|+++||||+|+||.++++.|+++| ++|+++.|+.....+.....+.  ..++.++.+|+++..            
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEG-ADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4457999999999999999999999999 9999998865332222222222  235778899998752            


Q ss_pred             cCCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ..++|++||+||......     ..+++...+++|+.+...+++++.+.   +.++|++||...+...            
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~------------  189 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN------------  189 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC------------
Confidence            125899999998653221     22345678899999999999998653   2389999998876321            


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                          .....|+.+|.+.+.+++.++.+.   +++++.++|+.++.+.....   ........+....         ....
T Consensus       190 ----~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~---~~~~~~~~~~~~~---------~~~~  253 (290)
T PRK06701        190 ----ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD---FDEEKVSQFGSNT---------PMQR  253 (290)
T ss_pred             ----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc---cCHHHHHHHHhcC---------CcCC
Confidence                122469999999999999888764   79999999999988753211   1111222221111         1234


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      +.+++|+|+++++++....   .| .+++.++.
T Consensus       254 ~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        254 PGQPEELAPAYVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence            7889999999999998754   33 56776653

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.85  E-value=1.6e-19  Score=148.27  Aligned_cols=212  Identities=15%  Similarity=0.083  Sum_probs=147.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~------------   95 (297)
                      .++++++||||+|+||+++++.|+++| ++|+++.+......+.....+.  ..++.++.+|+++...            
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEG-AKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            347899999999999999999999999 8888765533222222212111  1357889999988631            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ..+|+|||+||......    ..+.+++.+++|+.++..+++++.+    .+. ++|++||...+.              
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------------  148 (247)
T PRK12935         83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA--------------  148 (247)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC--------------
Confidence            24899999999755432    2245677889999999999888864    333 899999965432              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +..+...|+.+|.+.+.+.+.+..+.   ++++++++|+.+.++....    ...........+.         ....
T Consensus       149 --~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~----~~~~~~~~~~~~~---------~~~~  213 (247)
T PRK12935        149 --GGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE----VPEEVRQKIVAKI---------PKKR  213 (247)
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh----ccHHHHHHHHHhC---------CCCC
Confidence              11234569999999999988877653   8999999999987654211    1112222222221         1235


Q ss_pred             eeeHHHHHHHHHHHHhcCC---CccEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TGPINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~~~~i~~~  271 (297)
                      +++++|++++++.+++...   +..|++.++
T Consensus       214 ~~~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        214 FGQADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             CcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence            7899999999999987652   557888775

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.7e-19  Score=147.11  Aligned_cols=209  Identities=17%  Similarity=0.130  Sum_probs=146.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cC--CCceEEEecccCCccc----------
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IG--HPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~--~~~~~~~~~Dl~~~~~----------   95 (297)
                      ++|+++||||+|+||+++++.|+++| ++|+++.|......+.....   +.  ...+.++.+|+.+...          
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADG-ADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999 89999877543333222211   11  2367889999987621          


Q ss_pred             --CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH-----HcCC-eEEEEecceeecCCCCCCCCCCC
Q 022414           96 --IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK-----RVGA-RILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                        .++|.|||++|......    ..+++...+++|+.+...+++++.     +.+. ++|++||...+..          
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------  153 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG----------  153 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC----------
Confidence              35899999999765322    233456678999999999999997     4455 7999999776532          


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                            ..+...|..+|.+.+.+++.+..+   .++++++++|+.++++.....   +..   .......+.        
T Consensus       154 ------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~---~~~---~~~~~~~~~--------  213 (249)
T PRK12827        154 ------NRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA---APT---EHLLNPVPV--------  213 (249)
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc---chH---HHHHhhCCC--------
Confidence                  223356999999999998888765   379999999999998763221   111   111221111        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                       ..+.+++|+|+++..++....   +| .+++.++
T Consensus       214 -~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        214 -QRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             -cCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence             124578999999999887643   34 5566543

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.4e-20  Score=151.73  Aligned_cols=219  Identities=15%  Similarity=0.098  Sum_probs=146.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~------------   95 (297)
                      +++++++||||+|+||+++++.|+++| ++|+++.|+.....+.+...+.  ..++.++++|+++...            
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAG-AHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCC-CEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            346899999999999999999999999 9999998864322222222111  2357788999987631            


Q ss_pred             CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  172 (297)
                      .++|++||+||....  ...++...+++|+.++.++++++.+.   +.++|++||........    .       .+...
T Consensus        83 ~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~-------~~~~~  149 (248)
T PRK07806         83 GGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----V-------KTMPE  149 (248)
T ss_pred             CCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----c-------cCCcc
Confidence            258999999986432  23345667789999999999999864   23899999864321110    0       11112


Q ss_pred             CChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHH
Q 022414          173 RSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  249 (297)
                      ...|+.+|.+.|.+++.+..+   .++++++++|+.+-++...    .+..............       ...++++++|
T Consensus       150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~~~~d  218 (248)
T PRK07806        150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA----TLLNRLNPGAIEARRE-------AAGKLYTVSE  218 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh----hhhccCCHHHHHHHHh-------hhcccCCHHH
Confidence            467999999999999988754   4688999998776654311    0000000000000000       1136899999


Q ss_pred             HHHHHHHHHhcCC--CccEEecCCCc
Q 022414          250 MVDGLIRLMEGEN--TGPINIGNPGE  273 (297)
Q Consensus       250 va~~~~~~~~~~~--~~~~~i~~~~~  273 (297)
                      +|++++.+++.+.  +..|++++++.
T Consensus       219 va~~~~~l~~~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        219 FAAEVARAVTAPVPSGHIEYVGGADY  244 (248)
T ss_pred             HHHHHHHHhhccccCccEEEecCccc
Confidence            9999999999764  44688888754

>PRK06128 oxidoreductase; Provisional

Probab=99.85  E-value=3.1e-19  Score=150.71  Aligned_cols=217  Identities=15%  Similarity=0.076  Sum_probs=152.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhhcC--CCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG--HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++..++.... .+.....+.  ..++.++.+|+++..            
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G-~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREG-ADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcC-CEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999999 8998877653221 112222221  235778899998752            


Q ss_pred             cCCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ..++|++||+||......     ..+++...+++|+.++..+++++.+.   +.++|++||...+..             
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-------------  198 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP-------------  198 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC-------------
Confidence            236899999999643211     23457778999999999999999753   348999999887632             


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                         ......|+.+|.+.+.+++.++.+   .+++++.++||.+.++.....  .........+....+         ...
T Consensus       199 ---~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~--~~~~~~~~~~~~~~p---------~~r  264 (300)
T PRK06128        199 ---SPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG--GQPPEKIPDFGSETP---------MKR  264 (300)
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC--CCCHHHHHHHhcCCC---------CCC
Confidence               222356999999999999988865   489999999999998863211  011122222222211         124


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      +.+.+|+|.++++++....    +..+++.+|..+
T Consensus       265 ~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        265 PGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence            6789999999999987644    346788876544

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8.6e-20  Score=151.42  Aligned_cols=220  Identities=21%  Similarity=0.186  Sum_probs=145.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++++++||||+|+||+++++.|+++| ++|+++.|+..... .+.......++.++.+|+++..            ..+
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAG-ARVHVCDVSEAALA-ATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999 89999999643222 2222222225688899998763            136


Q ss_pred             cCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHH----HHcCC--eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA--RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        98 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      +|+|||++|.....     ...++....++.|+.++..+++++    ++.+.  +++++||.....              
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~--------------  152 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL--------------  152 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc--------------
Confidence            89999999976221     123445678899999999988877    33343  477777654321              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEE-e---cCCc
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV-Q---APGT  239 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~  239 (297)
                        +......|+.+|.+.|.+++.++.+   .+++++++||+.++++...    ..........  +..... .   ....
T Consensus       153 --~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~  224 (264)
T PRK12829        153 --GYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR----RVIEARAQQL--GIGLDEMEQEYLEKI  224 (264)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH----HHhhhhhhcc--CCChhHHHHHHHhcC
Confidence              1222356999999999999888765   3799999999999998631    1111100000  000000 0   0000


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      ....+++++|+|+++..++....    +..|++++|..
T Consensus       225 ~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        225 SLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence            11348999999999998886432    34678877643

>PRK06194 hypothetical protein; Provisional

Probab=99.84  E-value=5.2e-20  Score=154.61  Aligned_cols=228  Identities=10%  Similarity=0.022  Sum_probs=144.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------CC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      +++++|||||+|+||+++++.|+++| ++|++++|+.....+....... ..++.++.+|+++...            .+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALG-MKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 9999999864332222222211 2357789999987621            24


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcC-------CeEEEEecceeecCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVG-------ARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~-------~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                      +|+|||+||.......    .+++...+++|+.++.++++++    .+.+       .++|++||...+..         
T Consensus        84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------  154 (287)
T PRK06194         84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA---------  154 (287)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC---------
Confidence            8999999998654322    2345566889999998877764    3332       27999999876532         


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh-----CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                             ......|+.+|.+.+.+++.+..+.     ++++..+.|+.+..+-...             ..+.+..+.++
T Consensus       155 -------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~-------------~~~~~~~~~~~  214 (287)
T PRK06194        155 -------PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS-------------ERNRPADLANT  214 (287)
T ss_pred             -------CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc-------------cccCchhcccC
Confidence                   1233569999999999998887654     3667777887775432110             11111122222


Q ss_pred             CceeEe---------------eeeHHHHHHHHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          238 GTQTRS---------------FCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       238 ~~~~~~---------------~i~v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      +.+.++               .++++|+|+.++.++..+  ..+...  .+....++...+.+..+.+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~  280 (287)
T PRK06194        215 APPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAIRAG--RFYIYS--HPQALASVRTRMEDIVQQRNP  280 (287)
T ss_pred             ccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHHHcC--CeEEEc--CHHHHHHHHHHHHHHHHhcCC
Confidence            222222               267888888888877533  222222  233455666666665555443

>PRK05717 oxidoreductase; Validated

Probab=99.84  E-value=3e-19  Score=147.37  Aligned_cols=215  Identities=14%  Similarity=0.061  Sum_probs=147.5

Q ss_pred             cccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc----------
Q 022414           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        26 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~----------   95 (297)
                      +.+...+|+++||||+|+||+++++.|+++| ++|++++|+.....+ ..+.. ...+.++++|+++...          
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g-~~v~~~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEG-WQVVLADLDRERGSK-VAKAL-GENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcC-CEEEEEcCCHHHHHH-HHHHc-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4456678999999999999999999999999 999999875432221 11112 2357788999997521          


Q ss_pred             --CCcCEEEEccCCCCCcc------cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCC
Q 022414           96 --IEVDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 --~~~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                        .++|++||+||......      ..+++...+++|+.++..+++++.+    .+.++|++||...+..          
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~----------  150 (255)
T PRK05717         81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS----------  150 (255)
T ss_pred             HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC----------
Confidence              25899999999764321      2334567889999999999999964    2347899988765421          


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                            ......|+.+|.+.+.+.+.++++.  ++++..++|+.+.++......   ...+........+         .
T Consensus       151 ------~~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~---~~~~~~~~~~~~~---------~  212 (255)
T PRK05717        151 ------EPDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRR---AEPLSEADHAQHP---------A  212 (255)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccccc---chHHHHHHhhcCC---------C
Confidence                  1123569999999999999988775  489999999999887532110   0111111111111         1


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ..+.+++|+|.++..++....   .| .+.+.++
T Consensus       213 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  246 (255)
T PRK05717        213 GRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGG  246 (255)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence            136789999999998887543   33 4555544

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.1e-19  Score=150.03  Aligned_cols=213  Identities=15%  Similarity=0.084  Sum_probs=144.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCCCccchhhhcC-CCceEEEecccCCccc-------------
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-------------   95 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~-------------   95 (297)
                      ++++++||||+|+||+++++.|+++| ++|+++ .|+.....+....... ...+.++.+|+++...             
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G-~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDG-ALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999 888775 5543221111112211 2357789999988621             


Q ss_pred             -----CCcCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHHHHc--CC-eEEEEecceeecCCCCCCCCCCC
Q 022414           96 -----IEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRV--GA-RILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~--~~-r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                           .++|++||+||........    ......+++|+.++.++++++.+.  .. ++|++||..++.           
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~-----------  152 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL-----------  152 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC-----------
Confidence                 2589999999976543322    223556779999999999988763  23 799999987653           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                           +..+...|+.+|.+.+.+++.+..+   .++++++++|+.++++.......  -..+ ........        .
T Consensus       153 -----~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--~~~~-~~~~~~~~--------~  216 (254)
T PRK12746        153 -----GFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD--DPEI-RNFATNSS--------V  216 (254)
T ss_pred             -----CCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc--ChhH-HHHHHhcC--------C
Confidence                 2233456999999999998887764   47999999999998875211000  0111 11111111        1


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      ...+++++|+|+++..++..+.    +..|++.++
T Consensus       217 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        217 FGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             cCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            1246789999999998887653    447888765

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.84  E-value=8.4e-20  Score=151.07  Aligned_cols=222  Identities=18%  Similarity=0.107  Sum_probs=146.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc------------cC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      +++|+||||+|+||+++++.|.++| ++|++++|+.....+.....   .....+.++.+|+++..            ..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEG-YRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999 99999998643322221111   11135888999998752            13


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||+||......    ..+++...+++|+.++..+++++.+    .+  .++|++||.....              
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~--------------  146 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV--------------  146 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc--------------
Confidence            6899999998665332    2233556778999998777766643    45  2899998865311              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHc--CCCeEEecCCcee
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR--GEPLTVQAPGTQT  241 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  241 (297)
                        +......|+.+|.+.+.+++.++.+   .+++++.++|+.++++....   ..++.+......  +.......++...
T Consensus       147 --~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (259)
T PRK12384        147 --GSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ---SLLPQYAKKLGIKPDEVEQYYIDKVPL  221 (259)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh---hhhHHHHHhcCCChHHHHHHHHHhCcc
Confidence              1112356999999999998888753   58999999999888764321   122221111000  0000001112233


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      ..+++++|+++++++++.+..    +..|++++|+.
T Consensus       222 ~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        222 KRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             cCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence            568899999999999987653    34688887654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.9e-19  Score=147.11  Aligned_cols=204  Identities=16%  Similarity=0.100  Sum_probs=145.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++++++||||+|+||+++++.|+++| ++|++++|+.....+.... +....+.++.+|+.+..            ..+
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARG-ARVALIGRGAAPLSQTLPG-VPADALRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCC-CeEEEEeCChHhHHHHHHH-HhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999 9999999975433322222 22235677889998752            226


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|+|||++|......    ..+++.+.+..|..++..+++++.    +.+. ++|++||...+..               
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------  147 (239)
T PRK12828         83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA---------------  147 (239)
T ss_pred             cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC---------------
Confidence            899999998653221    223345667899999999888874    3455 8999999876632               


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                       ..+...|+.+|.+.+.+++.+.+.   .++++..+||+.++++.....               ..      ......++
T Consensus       148 -~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~---------------~~------~~~~~~~~  205 (239)
T PRK12828        148 -GPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD---------------MP------DADFSRWV  205 (239)
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc---------------CC------chhhhcCC
Confidence             123356999999999988877654   479999999999998742100               00      01112378


Q ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      +++|+|+++..++.++.    +..+.+.++.
T Consensus       206 ~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        206 TPEQIAAVIAFLLSDEAQAITGASIPVDGGV  236 (239)
T ss_pred             CHHHHHHHHHHHhCcccccccceEEEecCCE
Confidence            99999999999998653    3356666654

>PRK06182 short chain dehydrogenase; Validated

Probab=99.84  E-value=1.8e-19  Score=150.22  Aligned_cols=209  Identities=14%  Similarity=0.065  Sum_probs=142.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      ++++++||||+|+||+++++.|+++| ++|++++|+...    +.... ..++.++.+|+++..            ..++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G-~~V~~~~r~~~~----l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i   75 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQG-YTVYGAARRVDK----MEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRI   75 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHH----HHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999 999999986432    22221 235788999998862            1268


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHH----HHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGT----LNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~----~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++||+||......    ..+++...+++|+.+.    ..++..+++.+. ++|++||.....                +
T Consensus        76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----------------~  139 (273)
T PRK06182         76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI----------------Y  139 (273)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC----------------C
Confidence            99999999765432    2344667788898875    444556667776 899999965421                1


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCCh--------hHHHH----HHHHHHcCCCeEE
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG--------RVVSN----FIAQAIRGEPLTV  234 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~--------~~~~~----~~~~~~~~~~~~~  234 (297)
                      ......|+.+|.+.+.+.+.+..+   .++++++++|+.+.++.......        .....    +...+...     
T Consensus       140 ~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  214 (273)
T PRK06182        140 TPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRST-----  214 (273)
T ss_pred             CCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHh-----
Confidence            112246999999999988776643   58999999999998875311000        00000    11111111     


Q ss_pred             ecCCceeEeeeeHHHHHHHHHHHHhcCC-CccEEecC
Q 022414          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINIGN  270 (297)
Q Consensus       235 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~  270 (297)
                          .....+.+++|+|++++.++.... ...|++..
T Consensus       215 ----~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~  247 (273)
T PRK06182        215 ----YGSGRLSDPSVIADAISKAVTARRPKTRYAVGF  247 (273)
T ss_pred             ----hccccCCCHHHHHHHHHHHHhCCCCCceeecCc
Confidence                112346799999999999999765 34566544

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.84  E-value=2.8e-19  Score=147.29  Aligned_cols=210  Identities=17%  Similarity=0.099  Sum_probs=146.7

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------c
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.      ...  ....+..+++|+++..            .
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G-~~v~~~~~~~------~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAG-AKVIGFDQAF------LTQ--EDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEecch------hhh--cCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            34567999999999999999999999999 9999999864      111  1235788899998752            1


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++||++|......    ..+++...+++|+.+...+++++.+    .+. +++++||....               
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~---------------  139 (252)
T PRK08220         75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH---------------  139 (252)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc---------------
Confidence            24899999999764322    2345667889999999999888743    343 79999997543               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC-h-----hHHHHHHHHHHcCCCeEEecC
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-G-----RVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~  237 (297)
                       .+..+...|+.+|...+.+++.+..+   .++++++++|+.++++...... .     ............+        
T Consensus       140 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  210 (252)
T PRK08220        140 -VPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG--------  210 (252)
T ss_pred             -cCCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc--------
Confidence             12334467999999999999888876   6899999999999987531100 0     0000011111111        


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                       .....+++++|+|+++++++....   .| ...+.+|
T Consensus       211 -~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg  247 (252)
T PRK08220        211 -IPLGKIARPQEIANAVLFLASDLASHITLQDIVVDGG  247 (252)
T ss_pred             -CCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCC
Confidence             112357899999999999997643   33 4455554

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.84  E-value=3.9e-19  Score=146.27  Aligned_cols=215  Identities=18%  Similarity=0.133  Sum_probs=146.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------cCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ++++++||||+|+||+++++.|+++| ++|++++|+.....+...... ...++.++.+|+++..            ..+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEG-AKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999 999999886533222111111 1236888999998752            125


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||++|.......    .......+++|+.+...+++++.    +.+. +++++||...+...              
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~--------------  146 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS--------------  146 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC--------------
Confidence            8999999986432221    22345678899999998887774    4555 89999998776321              


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCCh--hHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        .....|+.+|.+.+.+++.++.+.   ++++++++|+.++++.......  .....+...+....+.         ..
T Consensus       147 --~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  215 (250)
T TIGR03206       147 --SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL---------GR  215 (250)
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------cC
Confidence              223569999999999998887663   7999999999998874211000  0001122222222211         12


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      +...+|+|+++..++....    +..+++++|
T Consensus       216 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       216 LGQPDDLPGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             CcCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence            4578999999999887654    346777664

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PLN02253 xanthoxin dehydrogenase

Probab=99.84  E-value=4.4e-19  Score=148.46  Aligned_cols=221  Identities=20%  Similarity=0.119  Sum_probs=147.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------C
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|......+.........++.++++|+++...            .
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHG-AKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3457999999999999999999999999 99999988643222111111112368889999998622            2


Q ss_pred             CcCEEEEccCCCCCc------ccccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEeccee-ecCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEV-YGDPLVHPQDESYW  164 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~-~~~~~~~~~~e~~~  164 (297)
                      ++|++||+||.....      ...+++...+++|+.++..+++++.+    .+. +++++||... ++.           
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------  162 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG-----------  162 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-----------
Confidence            589999999975321      12344677899999999998887754    232 7888887654 221           


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCC---Ch---hHHHHHHHHHHcCCCeEEe
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID---DG---RVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~---~~---~~~~~~~~~~~~~~~~~~~  235 (297)
                            .....|+.+|.+.|.+.+.++.+.   ++++..++|+.+.++.....   ..   ..+..+.........+   
T Consensus       163 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---  233 (280)
T PLN02253        163 ------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL---  233 (280)
T ss_pred             ------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC---
Confidence                  112469999999999999888763   79999999999987642110   00   0111111111111111   


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                           ....++++|+|+++++++....    +..+++.+|...+
T Consensus       234 -----~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
T PLN02253        234 -----KGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCT  272 (280)
T ss_pred             -----cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhc
Confidence                 0124689999999999987654    3467777764443

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4e-19  Score=146.09  Aligned_cols=204  Identities=17%  Similarity=0.135  Sum_probs=140.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++++++||||+|+||+++++.|+++| ++|++++|+.....+... .+ ..++.++++|+++..            ..+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEG-ARVAITGRDPASLEAARA-EL-GESALVIRADAGDVAAQKALAQALAEAFGR   80 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEecCCHHHHHHHHH-Hh-CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999 899999886422211111 11 135778889998752            135


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH---cCCeEEEEeccee-ecCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR---VGARILLTSTSEV-YGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~r~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~  169 (297)
                      +|++||+||......    ..+++...+++|+.++..+++++.+   .+.++|++||... ++                 
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~-----------------  143 (249)
T PRK06500         81 LDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG-----------------  143 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC-----------------
Confidence            899999998754322    2345667889999999999999975   3347777776443 32                 


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCC--ChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      ......|+.+|.+.|.+++.++.+.   ++++++++|+.+++|.....  .......+...+....++.         .+
T Consensus       144 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  214 (249)
T PRK06500        144 MPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RF  214 (249)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CC
Confidence            1223579999999999998887653   79999999999998742110  0111222333333322221         24


Q ss_pred             eeHHHHHHHHHHHHhcCC
Q 022414          245 CYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~  262 (297)
                      ..++|+|+++.+++..+.
T Consensus       215 ~~~~~va~~~~~l~~~~~  232 (249)
T PRK06500        215 GTPEEIAKAVLYLASDES  232 (249)
T ss_pred             cCHHHHHHHHHHHcCccc
Confidence            578999999999887544

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=6.6e-19  Score=144.92  Aligned_cols=215  Identities=15%  Similarity=0.070  Sum_probs=143.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEE-EecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~-~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      .+++++||||+|+||+++++.|+++| ++|++ ..|+.....+....... ..++.++.+|+++...            .
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g-~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEG-YDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 88766 45543222111111111 2357888999988631            2


Q ss_pred             CcCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||++|........    ++....+++|+.++..+++++.+    .+. +||++||...+.               
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------------  146 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR---------------  146 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc---------------
Confidence            589999999865432222    22344678999998888888854    344 899999976532               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +..+...|+.+|.+.+.+++.+..+   .+++++.++|+.+..+.......  ...+........+         ...+
T Consensus       147 -~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~---------~~~~  214 (250)
T PRK08063        147 -YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPN--REELLEDARAKTP---------AGRM  214 (250)
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccC--chHHHHHHhcCCC---------CCCC
Confidence             2233467999999999999888765   47999999999998765211100  0112222111111         1236


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      ++++|+|++++.++..+.    +..+++.+|..
T Consensus       215 ~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        215 VEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             cCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence            899999999999997653    34667766543

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.83  E-value=6.3e-19  Score=144.57  Aligned_cols=210  Identities=17%  Similarity=0.144  Sum_probs=145.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~v  101 (297)
                      ..+++++||||+|+||+++++.|.++| ++|++++|+....    .......+..++.+|+++..        ..++|++
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g-~~V~~~~r~~~~~----~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~v   81 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRG-ARVVAAARNAAAL----DRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGL   81 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCC-CEEEEEeCCHHHH----HHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            457899999999999999999999999 8999999864321    11111124567888998753        1258999


Q ss_pred             EEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414          102 YHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus       102 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      ||++|......    ..+++.+.++.|+.+...+++++.+    .+  -++|++||...+.                +..
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~  145 (245)
T PRK07060         82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV----------------GLP  145 (245)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC----------------CCC
Confidence            99998754322    2234556778999999999888855    23  3899999987653                222


Q ss_pred             CCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHH
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  248 (297)
                      ....|+.+|.+.+.+++.++.+   .+++++.++|+.++++........  ......+....         ....+++++
T Consensus       146 ~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~  214 (245)
T PRK07060        146 DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD--PQKSGPMLAAI---------PLGRFAEVD  214 (245)
T ss_pred             CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC--HHHHHHHHhcC---------CCCCCCCHH
Confidence            3456999999999999888765   479999999999998753210000  01111111111         113478999


Q ss_pred             HHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          249 DMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       249 Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      |+|++++.+++.+.   +| .+++.+|
T Consensus       215 d~a~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK07060        215 DVAAPILFLLSDAASMVSGVSLPVDGG  241 (245)
T ss_pred             HHHHHHHHHcCcccCCccCcEEeECCC
Confidence            99999999998764   34 5666554

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.83  E-value=2.8e-19  Score=137.61  Aligned_cols=245  Identities=19%  Similarity=0.199  Sum_probs=181.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-------CCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi  102 (297)
                      ..-+|||||+-|++|..++..|... |...|++-+-.. ....    .+  ....++..|+.|...       .++|++|
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~K-Pp~~----V~--~~GPyIy~DILD~K~L~eIVVn~RIdWL~  115 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVK-PPAN----VT--DVGPYIYLDILDQKSLEEIVVNKRIDWLV  115 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccC-Cchh----hc--ccCCchhhhhhccccHHHhhcccccceee
Confidence            3578999999999999999999766 534555433221 1111    11  234567788887632       3699999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (297)
                      |..+..+. ..+.+.....++|+.+..++++.|++.+.++..-|+++.||...+..-+.+.    +-..|++.||.||..
T Consensus       116 HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdl----tIQRPRTIYGVSKVH  190 (366)
T KOG2774|consen  116 HFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDL----TIQRPRTIYGVSKVH  190 (366)
T ss_pred             eHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCe----eeecCceeechhHHH
Confidence            98765432 2345555667899999999999999999999999999999977554333332    456789999999999


Q ss_pred             HHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       183 ~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      +|.+-+.+..+.++.+..+|.+.++.......+ ..+........+++++....-.++.+.++.+.+|+-++++.++..+
T Consensus       191 AEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~  270 (366)
T KOG2774|consen  191 AELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAAD  270 (366)
T ss_pred             HHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCC
Confidence            999998888888999999998877754321111 1233444455555555555567889999999999999999999887


Q ss_pred             C----CccEEecCCCcccHHHHHHHHHHhhc
Q 022414          262 N----TGPINIGNPGEFTMLELAENVKEVNF  288 (297)
Q Consensus       262 ~----~~~~~i~~~~~~s~~e~~~~i~~~~g  288 (297)
                      .    .+.||+.+ -.++..|++..+.+.+.
T Consensus       271 ~~~lkrr~ynvt~-~sftpee~~~~~~~~~p  300 (366)
T KOG2774|consen  271 SQSLKRRTYNVTG-FSFTPEEIADAIRRVMP  300 (366)
T ss_pred             HHHhhhheeeece-eccCHHHHHHHHHhhCC
Confidence            6    66899987 78999999999998764

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.83  E-value=7.1e-19  Score=144.54  Aligned_cols=211  Identities=17%  Similarity=0.151  Sum_probs=141.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      +++++||||+|+||.++++.|+++| +.|++..+......+.....+.  ...+.++.+|+++..            ...
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G-~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERG-YAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC-CeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999 8887776433221111211111  135778899999762            125


Q ss_pred             cCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc------C--CeEEEEecceee-cCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV------G--ARILLTSTSEVY-GDPLVHPQDESY  163 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~------~--~r~v~~Ss~~~~-~~~~~~~~~e~~  163 (297)
                      +|++||+||......     ..+++...+++|+.++..+++++.+.      +  .++|++||...+ +..         
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  151 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP---------  151 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC---------
Confidence            899999999754322     22345577899999999888877542      1  258999987543 211         


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                             .....|+.+|.+.+.+++.++.+.   +++++++||+.++++.....   ..+..........++.       
T Consensus       152 -------~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~---~~~~~~~~~~~~~p~~-------  214 (248)
T PRK06123        152 -------GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG---GEPGRVDRVKAGIPMG-------  214 (248)
T ss_pred             -------CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc---CCHHHHHHHHhcCCCC-------
Confidence                   111359999999999999887764   79999999999999853211   1112222222222221       


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                        .+.+++|++++++.++....    +..|++.++
T Consensus       215 --~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        215 --RGGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             --CCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence              13478999999999887642    346777654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=1.5e-18  Score=143.49  Aligned_cols=216  Identities=16%  Similarity=0.086  Sum_probs=147.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      .++++++||||+|+||.++++.|+++| ++|++++|+............. ..++.++.+|+++...            .
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAG-ARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            357999999999999999999999999 8999999864322211111111 2357789999998521            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc-----CC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-----GA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||+||......    ..+.+...++.|+.++..+++++.+.     +. ++|++||...+.....          
T Consensus        89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~----------  158 (259)
T PRK08213         89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP----------  158 (259)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc----------
Confidence            5899999998643222    22335567889999999999987654     44 8999999765432110          


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        ...+...|..+|.+.+.+++.++++.   ++++.+++|+.+-.+..    ...++.+...+..+.++.         .
T Consensus       159 --~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~----~~~~~~~~~~~~~~~~~~---------~  223 (259)
T PRK08213        159 --EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT----RGTLERLGEDLLAHTPLG---------R  223 (259)
T ss_pred             --cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch----hhhhHHHHHHHHhcCCCC---------C
Confidence              11234679999999999999887753   68999999988765531    223344444444333221         2


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +...+|+|+++..++....   +| .+++.++
T Consensus       224 ~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        224 LGDDEDLKGAALLLASDASKHITGQILAVDGG  255 (259)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            4468999999988887653   44 4555543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.82  E-value=2.1e-18  Score=141.77  Aligned_cols=211  Identities=12%  Similarity=0.056  Sum_probs=145.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~   95 (297)
                      .++|+++||||+|+||.+++++|+++| ++|++++|+..   +.....+.  ...+..+.+|+++..            .
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G-~~vi~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAG-ADIVGAGRSEP---SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCchH---HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999 99999998542   11111111  235788999998762            1


Q ss_pred             CCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cC-C-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG-A-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      .++|++||+||.......    .+++++.+++|+.+...+++++.+    .+ . ++|++||...+...           
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  147 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG-----------  147 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC-----------
Confidence            359999999997643222    234566788999999999888753    33 3 89999998765321           


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                           .....|..+|.+.+.+.+.++++.   +++++.++||.+..+........  ..........  .+       ..
T Consensus       148 -----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~--~~-------~~  211 (248)
T TIGR01832       148 -----IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD--EDRNAAILER--IP-------AG  211 (248)
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC--hHHHHHHHhc--CC-------CC
Confidence                 122469999999999999988774   79999999999987642110000  0111111111  11       13


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---CccEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TGPINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~  271 (297)
                      .++.++|+|+++++++....   .|.+...++
T Consensus       212 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  243 (248)
T TIGR01832       212 RWGTPDDIGGPAVFLASSASDYVNGYTLAVDG  243 (248)
T ss_pred             CCcCHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence            57899999999999997543   455544433

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07985 oxidoreductase; Provisional

Probab=99.82  E-value=2.1e-18  Score=145.14  Aligned_cols=214  Identities=18%  Similarity=0.130  Sum_probs=147.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC-CccchhhhcC--CCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG-SKDNLRKWIG--HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~------------   94 (297)
                      .++++++||||+|+||+++++.|+++| ++|++..|+... ..+.+.....  ...+.++++|+++..            
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREG-ADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCC-CEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999 999888765322 1222222221  235778899998852            


Q ss_pred             cCCcCEEEEccCCCCC-----cccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ..++|++||+||....     ....+++...+++|+.++..+++++.+.   +.++|++||...+..             
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~-------------  192 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP-------------  192 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC-------------
Confidence            2358999999986421     1123556778999999999999888653   348999999876532             


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                         ......|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++.......  .......+....++         ..
T Consensus       193 ---~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~r  258 (294)
T PRK07985        193 ---SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ--TQDKIPQFGQQTPM---------KR  258 (294)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC--CHHHHHHHhccCCC---------CC
Confidence               122356999999999999888876   48999999999999885321100  01111222221111         13


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +..++|+|+++++++....   .| .+.+.+|
T Consensus       259 ~~~pedva~~~~fL~s~~~~~itG~~i~vdgG  290 (294)
T PRK07985        259 AGQPAELAPVYVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_pred             CCCHHHHHHHHHhhhChhcCCccccEEeeCCC
Confidence            5678999999999997654   33 5666655

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.7e-19  Score=147.91  Aligned_cols=220  Identities=15%  Similarity=0.160  Sum_probs=149.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ++..+++++||||+|+||+++++.|+++| +.|++++|+.... +...... ...++.++.+|+++...           
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G-~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEG-AIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcC-CcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            45668999999999999999999999999 8999999875433 2112111 12367889999987621           


Q ss_pred             -CCcCEEEEccCCCCCccc---ccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIFY---KYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                       .++|++||++|.......   .++....++.|+.+...+.+.+.+    .+.+++++||...+.               
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~---------------  145 (258)
T PRK08628         81 FGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALT---------------  145 (258)
T ss_pred             cCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhcc---------------
Confidence             258999999996432221   244566788999998888887753    223799999976542               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHH------HHHHHHHcCCCeEEecCC
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVS------NFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  238 (297)
                       +..+...|+.+|...+.+++.++.+   .+++++.++|+.++++...    .++.      .....+....  +. +  
T Consensus       146 -~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~--~~-~--  215 (258)
T PRK08628        146 -GQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYE----NWIATFDDPEAKLAAITAKI--PL-G--  215 (258)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHH----HHhhhccCHHHHHHHHHhcC--Cc-c--
Confidence             2223467999999999999988764   4799999999999987421    1111      1111111111  11 0  


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCcccHHH
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGEFTMLE  278 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~~s~~e  278 (297)
                         ..++.++|+|+++++++....   +| .+.+.++ ...+++
T Consensus       216 ---~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg-~~~~~~  255 (258)
T PRK08628        216 ---HRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGG-YVHLDR  255 (258)
T ss_pred             ---ccCCCHHHHHHHHHHHhChhhccccCceEEecCC-cccccc
Confidence               136788999999999998653   44 4555443 444443

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.9e-18  Score=142.91  Aligned_cols=215  Identities=15%  Similarity=0.067  Sum_probs=145.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCcc------------cC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ++|+++||||+|+||+++++.|+++| +.|+++.+......+.+...+  ....+.++.+|+++..            ..
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHG-FDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 888887664322222222211  1235788999998752            12


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc----CC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||......    ..++....+++|+.+...+++++.+.    +. ++++++|...+.               
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~---------------  151 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN---------------  151 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC---------------
Confidence            5899999998754322    23446678899999999999887653    22 677777754431               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                       +......|+.+|.+.|.+.+.+..+.  ++.++.++||.++.....     ....+ .........   +      ...
T Consensus       152 -~~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~-----~~~~~-~~~~~~~~~---~------~~~  215 (258)
T PRK09134        152 -LNPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ-----SPEDF-ARQHAATPL---G------RGS  215 (258)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc-----ChHHH-HHHHhcCCC---C------CCc
Confidence             11122469999999999999987754  389999999888754311     01111 111111111   1      246


Q ss_pred             eHHHHHHHHHHHHhcCC--CccEEecCCCcccHH
Q 022414          246 YVSDMVDGLIRLMEGEN--TGPINIGNPGEFTML  277 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~  277 (297)
                      +++|+|++++++++++.  +..+++.++..++|.
T Consensus       216 ~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        216 TPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             CHHHHHHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence            79999999999999775  446777777666554

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.3e-18  Score=141.19  Aligned_cols=214  Identities=17%  Similarity=0.106  Sum_probs=147.8

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------c
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ++..+++++||||+|+||.++++.|+++| ++|++++|+...  ...........+..+.+|+++..            .
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G-~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKG-ARVALLDRSEDV--AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHH--HHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            34568999999999999999999999999 899999986432  11111222345678899998762            1


Q ss_pred             CCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++||++|.......    .++....+++|+.+...+++++.+    .+. ++|++||.....              
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------------  153 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV--------------  153 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc--------------
Confidence            358999999997643222    234556789999999999988754    344 899999976431              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+   .++++..++|+.+..+.....   +............+         ...
T Consensus       154 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~~~---------~~~  219 (255)
T PRK06841        154 --ALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKA---WAGEKGERAKKLIP---------AGR  219 (255)
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccc---cchhHHHHHHhcCC---------CCC
Confidence              1222356999999999999888766   479999999999877642110   00111111222111         124


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      +.+++|+|++++.++..+.   +| .+.+.+|.
T Consensus       220 ~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        220 FAYPEEIAAAALFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             CcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            7799999999999998754   44 45666553

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=1.4e-18  Score=143.20  Aligned_cols=212  Identities=17%  Similarity=0.169  Sum_probs=143.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      .++|+++||||+|+||+++++.|++.| ++|+++.+......+.+..... .++.++++|+++...            .+
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G-~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREG-ARVVVNYHQSEDAAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            356899999999999999999999999 8888766533222222222222 467888999987521            12


Q ss_pred             -cCEEEEccCCCCC----------cccccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCC
Q 022414           98 -VDQIYHLACPASP----------IFYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        98 -~d~vi~~a~~~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                       +|++||+||....          ....++..+.++.|+.+...+++++.    +.+. +++++||....          
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~----------  150 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ----------  150 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc----------
Confidence             8999999985321          01223455678999999999998885    3444 79999986432          


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                            .+..+...|+.+|.+.+.+++.++.+   .+++++.++||.+..+.....   ........+....+  +    
T Consensus       151 ------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~---~~~~~~~~~~~~~~--~----  215 (253)
T PRK08642        151 ------NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA---TPDEVFDLIAATTP--L----  215 (253)
T ss_pred             ------CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc---CCHHHHHHHHhcCC--c----
Confidence                  13334467999999999999998876   368999999998876532111   11122222222211  1    


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                         ..+.+++|+|+++.+++....   +| .+.+.+|
T Consensus       216 ---~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        216 ---RKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             ---CCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence               247899999999999998643   44 5666554

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.82  E-value=4.3e-19  Score=152.49  Aligned_cols=251  Identities=21%  Similarity=0.170  Sum_probs=174.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcC--CCeEEEEecCCCCCc--cchhhh---------cC-----CCceEEEecccC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYFTGSK--DNLRKW---------IG-----HPRFELIRHDVT   91 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~--~~~~~~---------~~-----~~~~~~~~~Dl~   91 (297)
                      ..+++|+|||||||+|+.+++.|++.-  ..+++++.|...+..  +.+..+         .+     ..++..+.+|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            368999999999999999999999874  258889999865442  222211         11     246778889998


Q ss_pred             Cccc-----------CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCC
Q 022414           92 EPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        92 ~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~  158 (297)
                      +..+           .++|+|||+|+...   +.+.......+|..++.++++.|++...  -++|+|++++--  ....
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvr---Fde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~--~~~~  164 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVR---FDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNC--NVGH  164 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeec---cchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheec--cccc
Confidence            7632           25899999998654   4555667788999999999999999876  499999988751  1111


Q ss_pred             CCCCCCCCCC-----------------------C---CCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCC
Q 022414          159 QDESYWGNVN-----------------------P---IGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN  212 (297)
Q Consensus       159 ~~e~~~~~~~-----------------------~---~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~  212 (297)
                      +.|..+....                       +   ....+.|..+|+.+|+.+.+..  .+++.+|+||+.|......
T Consensus       165 i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~E  242 (467)
T KOG1221|consen  165 IEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKE  242 (467)
T ss_pred             ccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccC
Confidence            1121111000                       0   0123569999999999998754  4799999999999987765


Q ss_pred             CCChhHHHH------HHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhc--CC-----CccEEecCC--CcccHH
Q 022414          213 IDDGRVVSN------FIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG--EN-----TGPINIGNP--GEFTML  277 (297)
Q Consensus       213 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~--~~-----~~~~~i~~~--~~~s~~  277 (297)
                      +-+ +++..      ++-..-.|..-.+..+.+...++++++.|+++++.+.-.  ..     ..+||++++  .+++|.
T Consensus       243 P~p-GWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~  321 (467)
T KOG1221|consen  243 PFP-GWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWG  321 (467)
T ss_pred             CCC-CccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHH
Confidence            532 22221      111122233334557888889999999999988865521  11     338999887  458999


Q ss_pred             HHHHHHHHhhc
Q 022414          278 ELAENVKEVNF  288 (297)
Q Consensus       278 e~~~~i~~~~g  288 (297)
                      ++.+...+.+.
T Consensus       322 ~~~e~~~~~~~  332 (467)
T KOG1221|consen  322 DFIELALRYFE  332 (467)
T ss_pred             HHHHHHHHhcc
Confidence            99998888764

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1e-18  Score=145.40  Aligned_cols=209  Identities=17%  Similarity=0.137  Sum_probs=142.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      .+++|+||||+|+||+++++.|+++| ++|++++|+.....       ...++.++++|++|..            ..++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g-~~V~~~~r~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAG-YRVFGTSRNPARAA-------PIPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEeCChhhcc-------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            35789999999999999999999999 99999999643221       1236788999998862            2258


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++|||||......    ..++....+++|+.++..+++++    ++.+. ++|++||...+.                +
T Consensus        75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------~  138 (270)
T PRK06179         75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL----------------P  138 (270)
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC----------------C
Confidence            99999999765432    22345677899999888888775    55666 899999976542                1


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC--hhHHHHH--HHHHHcCCCeEEecCCceeE
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD--GRVVSNF--IAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~  242 (297)
                      ......|+.+|...+.+.+.+..+   .++++++++|+.+.++......  ...+...  ...... ..+.     ....
T Consensus       139 ~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~  212 (270)
T PRK06179        139 APYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVS-KAVA-----KAVK  212 (270)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHH-HHHH-----hccc
Confidence            222357999999999998887654   5899999999999877532110  0000000  000000 0000     0011


Q ss_pred             eeeeHHHHHHHHHHHHhcCCCccEEec
Q 022414          243 SFCYVSDMVDGLIRLMEGENTGPINIG  269 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~~~~~~i~  269 (297)
                      .....+|+|+.++.++..+..+..++.
T Consensus       213 ~~~~~~~va~~~~~~~~~~~~~~~~~~  239 (270)
T PRK06179        213 KADAPEVVADTVVKAALGPWPKMRYTA  239 (270)
T ss_pred             cCCCHHHHHHHHHHHHcCCCCCeeEec
Confidence            245789999999999988764443333

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2e-18  Score=143.19  Aligned_cols=202  Identities=12%  Similarity=0.115  Sum_probs=140.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------CCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~~~   98 (297)
                      +++++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ...+.++.+|+.+...            .++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAG-AQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999 8999999864332221111111 2357788999988631            268


Q ss_pred             CEEEEccCCCCCcccc-----cChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIFYK-----YNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |+|||++|........     +.+.+.++.|+.++..+++.+.+    .+.++|++||...+.                +
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~----------------~  143 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT----------------G  143 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC----------------C
Confidence            9999999876543222     22456789999999999988853    334799999977653                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ..+...|+.+|...+.+.+.+..+   .+++++.++|+.+..+....    .    ..  ..+...  ...+....++++
T Consensus       144 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~----~----~~--~~~~~~--~~~~~~~~~~~~  211 (263)
T PRK06181        144 VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR----A----LD--GDGKPL--GKSPMQESKIMS  211 (263)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh----h----cc--cccccc--ccccccccCCCC
Confidence            223467999999999998877643   47999999999887654210    0    00  001111  111222236899


Q ss_pred             HHHHHHHHHHHHhcCC
Q 022414          247 VSDMVDGLIRLMEGEN  262 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~  262 (297)
                      ++|+|++++.+++.+.
T Consensus       212 ~~dva~~i~~~~~~~~  227 (263)
T PRK06181        212 AEECAEAILPAIARRK  227 (263)
T ss_pred             HHHHHHHHHHHhhCCC
Confidence            9999999999998654

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.3e-18  Score=143.73  Aligned_cols=221  Identities=14%  Similarity=0.082  Sum_probs=141.5

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchh---hhcC--CCceEEEecccCCcc--------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR---KWIG--HPRFELIRHDVTEPL--------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~---~~~~--~~~~~~~~~Dl~~~~--------   94 (297)
                      +..++++++||||+|+||.++++.|+++| ++|+++.+......+...   +.+.  ...+.++++|+++..        
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G-~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQG-AKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCC-CcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence            34457899999999999999999999999 887777654332222211   1111  235788899998762        


Q ss_pred             ----cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCC
Q 022414           95 ----LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        95 ----~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                          ..++|++||+||......    ..+++...+++|+.++..+++++.+.   +.++++++|.....           
T Consensus        83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-----------  151 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-----------  151 (257)
T ss_pred             HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-----------
Confidence                236899999999743222    23346678899999999999888653   22555553322211           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                           +......|+.+|.+.|.+++.++.+.   +++++.++||.+.++...+...   .....  .......  .....
T Consensus       152 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~---~~~~~--~~~~~~~--~~~~~  219 (257)
T PRK12744        152 -----FTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG---AEAVA--YHKTAAA--LSPFS  219 (257)
T ss_pred             -----cCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc---cchhh--ccccccc--ccccc
Confidence                 01123569999999999999998764   6999999999997764221110   00000  0000000  01111


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---CccEEecCCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TGPINIGNPG  272 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~  272 (297)
                      ...+.+++|+|+++.++++...   +..+++.+|.
T Consensus       220 ~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~  254 (257)
T PRK12744        220 KTGLTDIEDIVPFIRFLVTDGWWITGQTILINGGY  254 (257)
T ss_pred             cCCCCCHHHHHHHHHHhhcccceeecceEeecCCc
Confidence            1247889999999999998542   3467776653

>PRK09186 flagellin modification protein A; Provisional

Probab=99.82  E-value=2.2e-18  Score=142.27  Aligned_cols=217  Identities=17%  Similarity=0.160  Sum_probs=140.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCccc------------
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~------------   95 (297)
                      .+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+   .....+.++++|+++...            
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAG-GIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999 99999988653322222221   122346677999988621            


Q ss_pred             CCcCEEEEccCCCCC-------cccccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASP-------IFYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      .++|++||||+....       ....+.....+++|+.+...+++++    ++.+. ++|++||...+..... ...++ 
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~-  159 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEG-  159 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccc-
Confidence            238999999975321       0112334566778887776665554    44565 8999999765432211 11111 


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                          .+......|+.+|...+.+.+.+..+   .++++++++|+.++++.    ...    +.........         
T Consensus       160 ----~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~----~~~----~~~~~~~~~~---------  218 (256)
T PRK09186        160 ----TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ----PEA----FLNAYKKCCN---------  218 (256)
T ss_pred             ----cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC----CHH----HHHHHHhcCC---------
Confidence                12222246999999999999877765   46999999999887643    111    1222221111         


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Ccc-EEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TGP-INIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~~-~~i~~~  271 (297)
                      ...+++++|+|+++++++....   +|. +.+.+|
T Consensus       219 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        219 GKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             ccCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence            1247899999999999997654   454 444443

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.81  E-value=8.3e-18  Score=139.20  Aligned_cols=210  Identities=14%  Similarity=0.082  Sum_probs=144.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+|+++||||+|+||+++++.|.++| ++|++++|+....        ....+.++++|+++..            ..+
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G-~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAG-ARVVTTARSRPDD--------LPEGVEFVAADLTTAEGCAAVARAVLERLGG   77 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCC-CEEEEEeCChhhh--------cCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 9999999964321        1235778999998763            235


Q ss_pred             cCEEEEccCCCCCc------ccccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        98 ~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      +|++||+||.....      ...+++...+++|+.+...+.+++    ++.+. ++|++||...+..             
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-------------  144 (260)
T PRK06523         78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP-------------  144 (260)
T ss_pred             CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC-------------
Confidence            89999999854211      123446677889999987776655    44554 7999999765421             


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHH-----------HHHHHHcC-CC
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSN-----------FIAQAIRG-EP  231 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~-----------~~~~~~~~-~~  231 (297)
                        .......|+.+|...+.+++.++.+   .++++++++|+.+.++...    .+...           ....+... ..
T Consensus       145 --~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T PRK06523        145 --LPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV----ALAERLAEAAGTDYEGAKQIIMDSLGG  218 (260)
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH----HHHHHHHhhcCCCHHHHHHHHHHHhcc
Confidence              1123467999999999999888765   3799999999999887521    11111           11111100 00


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      .+       ...+..++|+|+++.+++....    +..+.+.+|...
T Consensus       219 ~p-------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        219 IP-------LGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             Cc-------cCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccC
Confidence            11       1235678999999999998643    346777766543

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.81  E-value=7.1e-18  Score=138.95  Aligned_cols=211  Identities=17%  Similarity=0.140  Sum_probs=146.2

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..++|+++||||+|+||+++++.|+++| ++|++++|+...      . .....+.++++|+.+..            ..
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g-~~v~~~~r~~~~------~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAG-ATVVVCGRRAPE------T-VDGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCChhh------h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3567999999999999999999999999 999999986432      0 11246788899998752            12


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----c-C-CeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V-G-ARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-~-~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||+||......    ..++....+++|+.++..+++++.+    . + .++|++||...+.              
T Consensus        75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--------------  140 (252)
T PRK07856         75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR--------------  140 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC--------------
Confidence            5899999998654322    2233567789999999999988754    2 3 3899999976542              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                        +......|+.+|.+.+.+++.++.+.  .+++..++|+.+..+.......  -......+....++         ..+
T Consensus       141 --~~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~~~  207 (252)
T PRK07856        141 --PSPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYG--DAEGIAAVAATVPL---------GRL  207 (252)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhcc--CHHHHHHHhhcCCC---------CCC
Confidence              22334679999999999999988764  3889999999887664211000  01111111211111         235


Q ss_pred             eeHHHHHHHHHHHHhcCC---Cc-cEEecCCCcc
Q 022414          245 CYVSDMVDGLIRLMEGEN---TG-PINIGNPGEF  274 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~~  274 (297)
                      ..++|+|+++++++....   +| .+.+.+|...
T Consensus       208 ~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        208 ATPADIAWACLFLASDLASYVSGANLEVHGGGER  241 (252)
T ss_pred             cCHHHHHHHHHHHcCcccCCccCCEEEECCCcch
Confidence            678999999999987643   44 5677665543

>PRK06196 oxidoreductase; Provisional

Probab=99.81  E-value=8.8e-18  Score=142.84  Aligned_cols=220  Identities=13%  Similarity=0.064  Sum_probs=141.1

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------   94 (297)
                      .....+++|+||||+|+||+++++.|+++| ++|++++|+.....+.... +  ..+.++.+|+++..            
T Consensus        21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G-~~Vv~~~R~~~~~~~~~~~-l--~~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         21 GHDLSGKTAIVTGGYSGLGLETTRALAQAG-AHVIVPARRPDVAREALAG-I--DGVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH-h--hhCeEEEccCCCHHHHHHHHHHHHhc
Confidence            334467999999999999999999999999 9999999964332222111 1  24788899998762            


Q ss_pred             cCCcCEEEEccCCCCCcc--cccChhhhHHHhHHHHHHHHHH----HHHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ..++|++||+||......  ..+..+..+++|+.+...+.+.    +++.+. ++|++||.......  ...++.  ...
T Consensus        97 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~--~~~~~~--~~~  172 (315)
T PRK06196         97 GRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP--IRWDDP--HFT  172 (315)
T ss_pred             CCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC--CCcccc--Ccc
Confidence            236999999999654321  2344567789999986665554    455554 89999997542211  111111  001


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      .+..+...|+.+|.+.+.+.+.+..+   .+++++.++||.+.++........  ..............+ .     ..+
T Consensus       173 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~-~-----~~~  244 (315)
T PRK06196        173 RGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE--EQVALGWVDEHGNPI-D-----PGF  244 (315)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh--hhhhhhhhhhhhhhh-h-----hhc
Confidence            23445578999999999998887664   479999999999998853211100  000000000000000 0     024


Q ss_pred             eeHHHHHHHHHHHHhcCC
Q 022414          245 CYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~  262 (297)
                      ..++|+|..+++++..+.
T Consensus       245 ~~~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        245 KTPAQGAATQVWAATSPQ  262 (315)
T ss_pred             CCHhHHHHHHHHHhcCCc
Confidence            578999999999987644

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.5e-18  Score=140.16  Aligned_cols=212  Identities=21%  Similarity=0.161  Sum_probs=143.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~   95 (297)
                      .++++++||||+|+||+++++.|.++| ++|+++.|+.....+.+.+.+.  ..++.++++|+.+..            .
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADG-FAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 8888877754322222222111  236788899998752            2


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      .++|++||+||......    ..++....+++|+.++..+++++.+.   +.+++++||...+.                
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------  145 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL----------------  145 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC----------------
Confidence            36899999999754322    22345567889999999999888653   23799998876531                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +..+...|+.+|.+.+.+++.+..+   .++.++.++|+.+-.+.....   ........+....++         ..+.
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~~~---------~~~~  213 (245)
T PRK12937        146 PLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG---KSAEQIDQLAGLAPL---------ERLG  213 (245)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc---CCHHHHHHHHhcCCC---------CCCC
Confidence            2233467999999999999887755   368999999998876542110   011222333322221         1245


Q ss_pred             eHHHHHHHHHHHHhcCC---Cc-cEEecC
Q 022414          246 YVSDMVDGLIRLMEGEN---TG-PINIGN  270 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~---~~-~~~i~~  270 (297)
                      +++|+|+++.+++..+.   +| .+++++
T Consensus       214 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        214 TPEEIAAAVAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             CHHHHHHHHHHHcCccccCccccEEEeCC
Confidence            78999999999997654   34 455544

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.81  E-value=4.7e-18  Score=140.28  Aligned_cols=214  Identities=16%  Similarity=0.162  Sum_probs=147.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+++|+||||+|+||.++++.|.++| ++|++++|+.....+ +...+.  ..++.++.+|+++..            .
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G-~~vv~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAG-ASVVVSDINADAANH-VVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 899998886432221 111111  235778889998762            1


Q ss_pred             CCcCEEEEccCCCCCccc---ccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFY---KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      .++|++||+||.......   .+++...++.|+.++..+++++.    +.+. ++|++||....                
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~----------------  150 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE----------------  150 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc----------------
Confidence            358999999997543222   23455668999999999999885    3333 89999997643                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      .+..+...|+.+|.+.+.+++.++.+   .+++++++.|+.+..+....   ...+..........++         ..+
T Consensus       151 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~---~~~~~~~~~~~~~~~~---------~~~  218 (255)
T PRK06113        151 NKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS---VITPEIEQKMLQHTPI---------RRL  218 (255)
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc---ccCHHHHHHHHhcCCC---------CCC
Confidence            12233456999999999999988764   46899999999887654211   0111222222222111         235


Q ss_pred             eeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          245 CYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                      ..++|+++++++++....   +| .+++.++..
T Consensus       219 ~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        219 GQPQDIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             cCHHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence            688999999999997653   34 667776643

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.81  E-value=6.5e-18  Score=139.34  Aligned_cols=214  Identities=15%  Similarity=0.057  Sum_probs=145.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+++++||||+|+||+++++.|+++| ++|++++|+.....+...+... ...+..+.+|+++..            ..
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G-~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYG-AEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            457899999999999999999999999 9999999864332222211111 235677889998762            23


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||++|......    ..+++...+++|+.++..+++++.+    .+. ++|++||.....               
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------  150 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL---------------  150 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc---------------
Confidence            5899999998653221    2344666889999998888887754    333 899999875421               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|..+|.+.+.+++.++.+   .+++++.++||.+.++.......  ...+........++         ..+
T Consensus       151 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~--~~~~~~~~~~~~p~---------~~~  218 (254)
T PRK08085        151 -GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE--DEAFTAWLCKRTPA---------ARW  218 (254)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc--CHHHHHHHHhcCCC---------CCC
Confidence             2223456999999999999988765   47999999999998875321100  01111222222111         236


Q ss_pred             eeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          245 CYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ...+|+|+++.+++....   +| ...+.+|
T Consensus       219 ~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg  249 (254)
T PRK08085        219 GDPQELIGAAVFLSSKASDFVNGHLLFVDGG  249 (254)
T ss_pred             cCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            788999999999998644   44 4455443

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.81  E-value=6.7e-18  Score=138.64  Aligned_cols=212  Identities=16%  Similarity=0.114  Sum_probs=143.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+|+++||||||++|+++++.|+++| ++|+++.|+.....+.....+  ....+.++.+|+.+..            .
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQG-ANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            456899999999999999999999999 889888876443222222221  1246778889998763            1


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|+|||++|......    ..+.+...+..|+.+...+++++.+    .+. +++++||.....              
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~--------------  147 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM--------------  147 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc--------------
Confidence            36899999998754322    2233556778999999888888864    344 799999864321              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|..+|.+.+.+++.++.+   .++++++++|+.+.++....    .............+.         ..
T Consensus       148 --~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~----~~~~~~~~~~~~~~~---------~~  212 (248)
T PRK05557        148 --GNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA----LPEDVKEAILAQIPL---------GR  212 (248)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc----cChHHHHHHHhcCCC---------CC
Confidence              1112356999999999888877653   47999999998876543211    112222222222211         13


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      +.+++|+|+++..++....    +..+++.++
T Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~  244 (248)
T PRK05557        213 LGQPEEIASAVAFLASDEAAYITGQTLHVNGG  244 (248)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccccEEEecCC
Confidence            5689999999988886522    346788765

>PRK06398 aldose dehydrogenase; Validated

Probab=99.81  E-value=9.1e-18  Score=138.73  Aligned_cols=206  Identities=17%  Similarity=0.078  Sum_probs=142.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++|+++||||+|+||+++++.|.+.| ++|++++|+....          ..+.++++|+++..            ..+
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G-~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   72 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEG-SNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYGR   72 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 9999999864321          25778899998762            136


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||.......    .++....+++|+.++..+++++.+    .+. ++|++||...+.                
T Consensus        73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------  136 (258)
T PRK06398         73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA----------------  136 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc----------------
Confidence            9999999997543222    233556689999999888877743    344 899999976642                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCC-------ChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNID-------DGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                      +......|+.+|.+.+.+.+.++.+.  +++++.++||.+..+.....       ...........+..         ..
T Consensus       137 ~~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  207 (258)
T PRK06398        137 VTRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGE---------MH  207 (258)
T ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhh---------cC
Confidence            23344679999999999999988764  38999999998866531100       00000000111111         01


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ....+..++|+|+++++++....   .| .+.+.+|
T Consensus       208 ~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg  243 (258)
T PRK06398        208 PMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGG  243 (258)
T ss_pred             CcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCc
Confidence            11246789999999999987543   34 5566665

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.8e-18  Score=140.86  Aligned_cols=216  Identities=13%  Similarity=0.092  Sum_probs=145.3

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~-----------   95 (297)
                      +...+++++||||+|+||.++++.|+++| ++|++++|+.....+....... ..++.++.+|+++...           
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAG-ADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 8999999964332221111111 2357888999987632           


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH-----cCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR-----VGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       .++|+|||+||......    ..+++...+++|+.++..+++++.+     .+. ++|++||.....            
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~------------  152 (263)
T PRK07814         85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL------------  152 (263)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC------------
Confidence             36899999998654322    2244667889999999999999864     343 799999965421            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                          +..+...|+.+|.+.+.+++.+..+.  ++++..++|+.+..+.......  -..+...+....++         .
T Consensus       153 ----~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~  217 (263)
T PRK07814        153 ----AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA--NDELRAPMEKATPL---------R  217 (263)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC--CHHHHHHHHhcCCC---------C
Confidence                22334579999999999999888764  4788899998886553211000  01111111111111         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      .+..++|+|+++++++....   .| .+.+.++
T Consensus       218 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        218 RLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             CCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            34688999999999987643   33 4555443

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.81  E-value=8.8e-18  Score=140.28  Aligned_cols=158  Identities=18%  Similarity=0.180  Sum_probs=118.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-------------CC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------------IE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------------~~   97 (297)
                      ++++++||||+|+||+++++.|.++| ++|++++|+...    +..+. ..+++++.+|+++...             .+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G-~~Vi~~~r~~~~----~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDG-WRVFATCRKEED----VAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHH----HHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999 999999986432    22211 2357888999987521             25


Q ss_pred             cCEEEEccCCCCCcccc----cChhhhHHHhHHH----HHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIG----TLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~----~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||........    ++....+++|+.+    +..++..+++.+. ++|++||...+.                
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----------------  140 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV----------------  140 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC----------------
Confidence            89999999876543322    2345678899988    5566677777776 899999975431                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHH---HhCCcEEEEeeccccCCC
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPR  210 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ivrp~~v~G~~  210 (297)
                      +..+...|+.+|.+.+.+.+.+..   ..++++++++||.+-.+.
T Consensus       141 ~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~  185 (277)
T PRK05993        141 PMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF  185 (277)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence            233446799999999999887764   358999999999887653

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.81  E-value=5.1e-18  Score=141.84  Aligned_cols=216  Identities=14%  Similarity=0.148  Sum_probs=144.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+++++||||+|+||+++++.|+++| +.|++++|+.....+....+.. ..++.++++|+++..            ..
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAG-AKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 8999999864322222222211 135778899998762            13


Q ss_pred             CcCEEEEccCCCCCcc-------------------cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeec
Q 022414           97 EVDQIYHLACPASPIF-------------------YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYG  152 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~-------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~  152 (297)
                      ++|++||+||...+..                   ..+++...+++|+.+...+++++    ++.+. ++|++||...+.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            6899999999643221                   12335567888999887665554    44444 899999987652


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCC---ChhHHHHHHHHH
Q 022414          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID---DGRVVSNFIAQA  226 (297)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~---~~~~~~~~~~~~  226 (297)
                                      +......|+.+|.+.+.+++.++.+.   ++++..++|+.+.++.....   ............
T Consensus       167 ----------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  230 (278)
T PRK08277        167 ----------------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKI  230 (278)
T ss_pred             ----------------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHH
Confidence                            23334569999999999999888764   79999999999988742100   000001111111


Q ss_pred             HcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhc-CC---Cc-cEEecCC
Q 022414          227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG-EN---TG-PINIGNP  271 (297)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~-~~---~~-~~~i~~~  271 (297)
                      ....+         ...+...+|+|+++++++.. ..   +| .+.+.+|
T Consensus       231 ~~~~p---------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        231 LAHTP---------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             hccCC---------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence            11111         12366789999999998886 33   44 4555554

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.5e-18  Score=142.07  Aligned_cols=191  Identities=11%  Similarity=0.057  Sum_probs=135.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~~d   99 (297)
                      +|+|+||||+|+||+++++.|+++| ++|++++|+.....+.........++.++++|+++...            ..+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQG-ATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            5899999999999999999999999 89999998643222111111111268889999998521            2489


Q ss_pred             EEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHH----HHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLG----LAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus       100 ~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      ++||++|......     ..+++...+++|+.++..+++    .+++.+. ++|++||...+.                +
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~----------------~  144 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR----------------G  144 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC----------------C
Confidence            9999999754321     223466788999999988776    4455555 899999876541                1


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|+.+|.+.+.+.+.+..+   .++++++++|+.+.++....              .....         ..++.
T Consensus       145 ~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~--------------~~~~~---------~~~~~  201 (257)
T PRK07024        145 LPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH--------------NPYPM---------PFLMD  201 (257)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc--------------CCCCC---------CCccC
Confidence            222356999999999999887643   58999999999998764110              00000         01357


Q ss_pred             HHHHHHHHHHHHhcCC
Q 022414          247 VSDMVDGLIRLMEGEN  262 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~  262 (297)
                      .+|+|+.++.++.++.
T Consensus       202 ~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        202 ADRFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            8999999999998754

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.3e-18  Score=141.94  Aligned_cols=221  Identities=14%  Similarity=0.015  Sum_probs=147.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      .++++++||||||+||+++++.|+++| +.|++.+|+.....+ ....+  ..+.++.+|+++...            .+
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G-~~v~~~~r~~~~~~~-~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALG-ARVAIGDLDEALAKE-TAAEL--GLVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEECCHHHHHH-HHHHh--ccceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999 999999885432211 11111  147788999987631            35


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||.......    .++....+++|+.++..+++++    .+.+. ++|++||...+.                
T Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  142 (273)
T PRK07825         79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI----------------  142 (273)
T ss_pred             CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC----------------
Confidence            8999999997643322    2235567889999888877665    44565 899999987542                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|..+|...+.+.+.+..+   .++++++++|+.+..+...                +..      ......++
T Consensus       143 ~~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~----------------~~~------~~~~~~~~  200 (273)
T PRK07825        143 PVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA----------------GTG------GAKGFKNV  200 (273)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc----------------ccc------cccCCCCC
Confidence            2233466999999999887776654   4899999999887543210                000      01112468


Q ss_pred             eHHHHHHHHHHHHhcCCCccEEe--c----CCCcccHHHHHHHHHHhhcccCc
Q 022414          246 YVSDMVDGLIRLMEGENTGPINI--G----NPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~~~~~~i--~----~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      .++|+|++++.++.++....+.-  .    .-..+....+.+.+.+.++....
T Consensus       201 ~~~~va~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  253 (273)
T PRK07825        201 EPEDVAAAIVGTVAKPRPEVRVPRALGPLAQAQRLLPRRVREALNRLLGGDRV  253 (273)
T ss_pred             CHHHHHHHHHHHHhCCCCEEeccHHHHHHHHHHHhCcHHHHHHHHHHhcccce
Confidence            99999999999999875322110  0    00122334555666666665443

>PRK09242 tropinone reductase; Provisional

Probab=99.81  E-value=6.2e-18  Score=139.71  Aligned_cols=214  Identities=13%  Similarity=0.111  Sum_probs=147.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~-----------   94 (297)
                      ...+|+++||||+|.||+++++.|.++| ++|++++|+.....+....+   ....++.++.+|+++..           
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLG-ADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 99999998643322211111   11236788899998752           


Q ss_pred             -cCCcCEEEEccCCCCCc----ccccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       ..++|++||++|.....    ...++....+.+|+.+...+++++.    +.+. ++|++||...+.            
T Consensus        85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~------------  152 (257)
T PRK09242         85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT------------  152 (257)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC------------
Confidence             23689999999964321    1334566778999999999988874    3444 899999987653            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                          +......|+.+|.+.+.+++.++.+   .+++++.++|+.+.++.......  ............++         
T Consensus       153 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~--~~~~~~~~~~~~~~---------  217 (257)
T PRK09242        153 ----HVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS--DPDYYEQVIERTPM---------  217 (257)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC--ChHHHHHHHhcCCC---------
Confidence                2233456999999999999887754   47999999999998875321100  11222222222221         


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC---Cc-cEEecC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGN  270 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~  270 (297)
                      ..+...+|++.++.+++....   .| .+.+.+
T Consensus       218 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g  250 (257)
T PRK09242        218 RRVGEPEEVAAAVAFLCMPAASYITGQCIAVDG  250 (257)
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence            124578999999999997543   34 445544

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=5.2e-18  Score=139.99  Aligned_cols=214  Identities=16%  Similarity=0.047  Sum_probs=142.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ...+|+++||||+|+||+++++.|.++| ++|+++.+......+.+    ...++.++.+|+++..            ..
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G-~~v~~~~~~~~~~~~~l----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREG-AKVAVLYNSAENEAKEL----REKGVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCcHHHHHHH----HhCCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999 89988776432221111    1225778899999862            13


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHH----HHHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||......    ..+++...+++|+.++..+.+.    +++.+. ++|++||...++.              
T Consensus        79 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~--------------  144 (255)
T PRK06463         79 RVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT--------------  144 (255)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC--------------
Confidence            6899999998754222    2344567788999996555444    444444 8999999876531              


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC-ChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                       +......|+.+|.+.+.+.+.++.+   .+++++.++|+.+-.+..... .......+........+         ...
T Consensus       145 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  214 (255)
T PRK06463        145 -AAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV---------LKT  214 (255)
T ss_pred             -CCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC---------cCC
Confidence             1122356999999999999988865   479999999998865432110 00001111111112111         123


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +..++|+|+++++++....   +| .+.+.+|
T Consensus       215 ~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  246 (255)
T PRK06463        215 TGKPEDIANIVLFLASDDARYITGQVIVADGG  246 (255)
T ss_pred             CcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            5679999999999997654   44 5566655

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.80  E-value=6.3e-18  Score=139.06  Aligned_cols=213  Identities=17%  Similarity=0.124  Sum_probs=146.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....... ..++.++.+|+++...            .
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAG-ATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            347999999999999999999999999 8999998864322222111111 2358889999987632            3


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||++|......    ..++....+..|+.++..+++++.+    .+. ++|++||...+.               
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------  148 (250)
T PRK12939         84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW---------------  148 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc---------------
Confidence            6999999999754322    2234556678999999999888754    333 899999976542               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|+.+|...+.+++.+..+   .++.+..++|+.+..+.......   ..+........         ....+
T Consensus       149 -~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~---------~~~~~  215 (250)
T PRK12939        149 -GAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA---DERHAYYLKGR---------ALERL  215 (250)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC---hHHHHHHHhcC---------CCCCC
Confidence             1222356999999999999887654   47999999999887765321111   01222222211         12346


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      ++++|+|++++.++..+.    +..+.+.++
T Consensus       216 ~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg  246 (250)
T PRK12939        216 QVPDDVAGAVLFLLSDAARFVTGQLLPVNGG  246 (250)
T ss_pred             CCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            899999999999998653    335666654

>PRK08264 short chain dehydrogenase; Validated

Probab=99.80  E-value=1.2e-17  Score=136.34  Aligned_cols=158  Identities=19%  Similarity=0.135  Sum_probs=120.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCCCCccchhhhcCCCceEEEecccCCccc--------CCcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~--------~~~d~  100 (297)
                      ..+++++||||+|+||+++++.|+++| + .|+++.|+.....+      ...++.++.+|+.+...        ..+|+
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G-~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   76 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARG-AAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEAASDVTI   76 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-cccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            456899999999999999999999999 6 99999986543221      22468889999987522        25899


Q ss_pred             EEEccCCC-CCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPA-SPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       101 vi~~a~~~-~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      |||++|.. ....    ..+++...+++|+.+...+++++.    +.+. +++++||...+.                +.
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~----------------~~  140 (238)
T PRK08264         77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV----------------NF  140 (238)
T ss_pred             EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc----------------CC
Confidence            99999973 2211    234456678899999999988864    3444 799999977653                22


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCC
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPR  210 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~  210 (297)
                      .+...|+.+|.+.+.+.+.+..+   .+++++++||+.+.++.
T Consensus       141 ~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        141 PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence            33467999999999998887765   37999999999887653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.80  E-value=8.1e-19  Score=163.13  Aligned_cols=223  Identities=17%  Similarity=0.120  Sum_probs=151.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      .+++++||||+|+||+++++.|.+.| ++|++++|+..........+.....+..+.+|+++..            ..++
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~G-a~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEG-ACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999 8999999965332221111111136788999998762            1269


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcC--CeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      |+|||+||......    ..+.....+++|+.+...+++++.    +.+  .+||++||...+.                
T Consensus       500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~----------------  563 (681)
T PRK08324        500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN----------------  563 (681)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC----------------
Confidence            99999999654322    233456678899999999977664    444  4899999976542                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeecccc-CCCCCCCChhHHHHHHHHHHcCCCe----EEecCCce
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTY-GPRMNIDDGRVVSNFIAQAIRGEPL----TVQAPGTQ  240 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  240 (297)
                      +......|+.+|.+.+.+++.+..+.   ++++++++|+.+| +......  .+...  .....+...    ....++..
T Consensus       564 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~--~~~~~--~~~~~g~~~~~~~~~~~~~~~  639 (681)
T PRK08324        564 PGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG--EWIEA--RAAAYGLSEEELEEFYRARNL  639 (681)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc--hhhhh--hhhhccCChHHHHHHHHhcCC
Confidence            12234679999999999999887664   5999999999998 5542211  11000  000011100    01123344


Q ss_pred             eEeeeeHHHHHHHHHHHHhc--CC--CccEEecCCCcc
Q 022414          241 TRSFCYVSDMVDGLIRLMEG--EN--TGPINIGNPGEF  274 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~--~~--~~~~~i~~~~~~  274 (297)
                      ...+++++|+|++++.++..  ..  +..+++.+|...
T Consensus       640 l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        640 LKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             cCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence            45789999999999998842  22  447888887543

>PRK12743 oxidoreductase; Provisional

Probab=99.80  E-value=8.8e-18  Score=138.73  Aligned_cols=210  Identities=17%  Similarity=0.110  Sum_probs=143.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      +++++||||+|+||+++++.|+++| ++|+++.+......+.....+.  ...+.++.+|+++..            ...
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQG-FDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999 9998886643322222222111  236888999999862            135


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +|++||++|......    ..+++...+.+|+.+...+++++.+    .+  .++|++||....                
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~----------------  144 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH----------------  144 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc----------------
Confidence            899999999754322    2344667789999999999988754    22  379999996532                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      .+..+...|+.+|.+.+.+++.++.+   .+++++.++||.++++......    .........+.  ++       ..+
T Consensus       145 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~----~~~~~~~~~~~--~~-------~~~  211 (256)
T PRK12743        145 TPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD----SDVKPDSRPGI--PL-------GRP  211 (256)
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC----hHHHHHHHhcC--CC-------CCC
Confidence            23344567999999999999888764   4799999999999987532111    11111111111  11       124


Q ss_pred             eeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          245 CYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      .+.+|+|+++..++....   +| .+.+.++
T Consensus       212 ~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  242 (256)
T PRK12743        212 GDTHEIASLVAWLCSEGASYTTGQSLIVDGG  242 (256)
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            588999999999987653   45 4555554

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.1e-18  Score=138.42  Aligned_cols=213  Identities=13%  Similarity=0.066  Sum_probs=144.6

Q ss_pred             EEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCEEEEccCC
Q 022414           36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQIYHLACP  107 (297)
Q Consensus        36 lItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~vi~~a~~  107 (297)
                      +||||+|+||+++++.|+++| ++|++++|+.....+.........+++++.+|+++..        ..++|++||++|.
T Consensus         1 lItGas~~iG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~   79 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEG-ARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD   79 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            599999999999999999999 9999999964322111111111246788899998762        2258999999997


Q ss_pred             CCCcc----cccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHH
Q 022414          108 ASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (297)
Q Consensus       108 ~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (297)
                      .....    ..++....+++|+.+...++++....+. ++|++||...+.                +..+...|+.+|.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~----------------~~~~~~~Y~~sK~a  143 (230)
T PRK07041         80 TPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR----------------PSASGVLQGAINAA  143 (230)
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC----------------CCCcchHHHHHHHH
Confidence            54322    2344667889999999999996655555 899999987753                23344679999999


Q ss_pred             HHHHHHHHHHHh-CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          183 AETLMFDYHRQH-GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       183 ~e~~~~~~~~~~-~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      .+.+.+.+..+. +++++.++|+.+-++............+........+.         ......+|+|++++.++..+
T Consensus       144 ~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~  214 (230)
T PRK07041        144 LEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA---------RRVGQPEDVANAILFLAANG  214 (230)
T ss_pred             HHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhcCC
Confidence            999999887663 58889999987765432110000001122222221111         12457899999999999876


Q ss_pred             C--CccEEecCCCcc
Q 022414          262 N--TGPINIGNPGEF  274 (297)
Q Consensus       262 ~--~~~~~i~~~~~~  274 (297)
                      .  +..|++.+|..+
T Consensus       215 ~~~G~~~~v~gg~~~  229 (230)
T PRK07041        215 FTTGSTVLVDGGHAI  229 (230)
T ss_pred             CcCCcEEEeCCCeec
Confidence            4  457888776543

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.80  E-value=5.3e-18  Score=136.55  Aligned_cols=199  Identities=14%  Similarity=0.135  Sum_probs=144.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC--CceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH--PRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~------------   95 (297)
                      .++++++|||||+.||.++++.|.++| ++|+++.|+..+..+...++..+  -.+.++.+|+++...            
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g-~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRG-YNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            457899999999999999999999999 99999999654433322222211  247789999998621            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ..+|++|||||+.....    .+++..+.+++|+.+...+.++.    .+++. .+|.++|...+               
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~---------------  147 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL---------------  147 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc---------------
Confidence            25999999999877653    34556678899999988777766    44554 89999998876               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                       .|.+-.+.|+.+|...-.+.+.+..+   .|+.+..+.||.+..+....              .+.....   .....-
T Consensus       148 -~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~--------------~~~~~~~---~~~~~~  209 (265)
T COG0300         148 -IPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA--------------KGSDVYL---LSPGEL  209 (265)
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc--------------ccccccc---ccchhh
Confidence             34444578999999988887776654   47999999997666543210              1111110   011245


Q ss_pred             eeeHHHHHHHHHHHHhcCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~  262 (297)
                      ++..+|+|+..+..+.+..
T Consensus       210 ~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         210 VLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             ccCHHHHHHHHHHHHhcCC
Confidence            7899999999999999865

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.80  E-value=7.9e-18  Score=131.77  Aligned_cols=202  Identities=15%  Similarity=0.061  Sum_probs=142.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~~   98 (297)
                      .+|.++|||||+.||.++++.|.+.| ++|++..|......+ +...+....+.....|++|...            .++
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G-~~vvl~aRR~drL~~-la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAG-AKVVLAARREERLEA-LADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEeccHHHHHH-HHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            35889999999999999999999999 999999995432222 2222222457888999998732            359


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++||+||......    ..+++...+++|+.+..++.++.    .+++. .+|.+||....                .+
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~----------------~~  146 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR----------------YP  146 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc----------------cc
Confidence            99999999765422    23557778899999999988887    33444 89999998752                23


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ....+.|+.+|++...+...+.++.   ++++..+.||.+-....+.-...--.......+.            ....+.
T Consensus       147 y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~------------~~~~l~  214 (246)
T COG4221         147 YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK------------GGTALT  214 (246)
T ss_pred             CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc------------cCCCCC
Confidence            4444779999999999988887664   6899999998774432110000000011111111            124678


Q ss_pred             HHHHHHHHHHHHhcCC
Q 022414          247 VSDMVDGLIRLMEGEN  262 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~  262 (297)
                      .+|+|++++++++.|.
T Consensus       215 p~dIA~~V~~~~~~P~  230 (246)
T COG4221         215 PEDIAEAVLFAATQPQ  230 (246)
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            9999999999999986

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.80  E-value=1.1e-17  Score=137.29  Aligned_cols=212  Identities=17%  Similarity=0.087  Sum_probs=144.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++++||||+|+||+++++.|.++| ++|++++|+.............  ...+.++.+|+++..            ..+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDG-YRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999 9999999874311111111111  235888999999752            235


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||++|......    ..+++...++.|+.+...+.+++    ++.+. ++|++||...+..               
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~---------------  145 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG---------------  145 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC---------------
Confidence            899999999754321    23446667889999988875544    55555 8999999766521               


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                       ......|..+|.+.+.+++.++.+   .++++++++|+.+.++.....    .......+....++         ..+.
T Consensus       146 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~----~~~~~~~~~~~~~~---------~~~~  211 (245)
T PRK12824        146 -QFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM----GPEVLQSIVNQIPM---------KRLG  211 (245)
T ss_pred             -CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc----CHHHHHHHHhcCCC---------CCCC
Confidence             222356999999999988887653   479999999999987653211    11222222222221         2245


Q ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      .++|+++++..++....    ++.+++.+|..
T Consensus       212 ~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        212 TPEEIAAAVAFLVSEAAGFITGETISINGGLY  243 (245)
T ss_pred             CHHHHHHHHHHHcCccccCccCcEEEECCCee
Confidence            78999999998886543    45778877643

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1e-17  Score=138.15  Aligned_cols=215  Identities=16%  Similarity=0.081  Sum_probs=144.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+++++||||+|+||+++++.|.+.| ++|++++|+.....+.....+.  ..++..+.+|+++..            .
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAG-ADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 9999999865332222222221  235778899998762            2


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||......    ..++....+++|+.++..+++++    ++.+. ++|++||...+...            
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------  152 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN------------  152 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC------------
Confidence            35899999999754322    23446677889999987777665    33444 89999987653211            


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +..+...|..+|.+.+.+.+.++.+   .++++++++||.+.++.....  .. ......+....++         ..
T Consensus       153 --~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~~-~~~~~~~~~~~p~---------~r  218 (254)
T PRK06114        153 --RGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--EM-VHQTKLFEEQTPM---------QR  218 (254)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--cc-hHHHHHHHhcCCC---------CC
Confidence              1112356999999999999888764   479999999999988753210  01 1111122221111         13


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +..++|+|+.+++++....   .| .+.+.+|
T Consensus       219 ~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        219 MAKVDEMVGPAVFLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             CcCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence            5678999999999987643   44 5555554

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.3e-17  Score=138.16  Aligned_cols=215  Identities=13%  Similarity=0.058  Sum_probs=143.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ..++++++||||+|.||+++++.|+++| ++|++++|+.....+....+..  ..++..+++|+++...           
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAG-ADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNI   83 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence            3567999999999999999999999999 9999999864332221111111  2357889999998621           


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++||++|......    ..+++...+++|+.+...+++++    ++.+. ++|++||...+.              
T Consensus        84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~--------------  149 (263)
T PRK08339         84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE--------------  149 (263)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC--------------
Confidence            25899999999654322    23446667888888766665544    45554 899999987542              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH-----------HHHHHHHHcCCCe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV-----------SNFIAQAIRGEPL  232 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~-----------~~~~~~~~~~~~~  232 (297)
                        +......|..+|.+.+.+.+.++.+   .+++++.+.||.+..+...    ...           ......+...  .
T Consensus       150 --~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~  221 (263)
T PRK08339        150 --PIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVI----QLAQDRAKREGKSVEEALQEYAKP--I  221 (263)
T ss_pred             --CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHH----HHHHhhhhccCCCHHHHHHHHhcc--C
Confidence              2222356999999999999888876   4699999999988665310    000           1111111111  1


Q ss_pred             EEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       233 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                      +       ...+..++|+|+++++++....   .| .+.+.+|..
T Consensus       222 p-------~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~  259 (263)
T PRK08339        222 P-------LGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRL  259 (263)
T ss_pred             C-------cccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcc
Confidence            1       1246788999999999987643   44 456655543

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.80  E-value=6.5e-18  Score=138.84  Aligned_cols=199  Identities=14%  Similarity=0.087  Sum_probs=135.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCcCE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEVDQ  100 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~d~  100 (297)
                      |+|+||||+|++|.++++.|+++| ++|++++|+..... .+...+ ..++.++.+|+.+..            ..++|.
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G-~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQG-HKVIATGRRQERLQ-ELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCC-CEEEEEECCHHHHH-HHHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            789999999999999999999999 99999999643221 111111 236788899998752            126999


Q ss_pred             EEEccCCCCC-----cccccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       101 vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      +||++|....     ....+++...+++|+.++..+++.+    ++.+. ++|++||...+.                +.
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------~~  141 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW----------------PY  141 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC----------------CC
Confidence            9999986421     1123445677899999866665554    45565 899999976431                22


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      .....|+.+|.+.+.+.+.+..+.   ++++.+++||.+.|+.....  .+ .........  ..    .+   ..++..
T Consensus       142 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~--~~-~~~~~~~~~--~~----~~---~~~~~~  209 (248)
T PRK10538        142 AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV--RF-KGDDGKAEK--TY----QN---TVALTP  209 (248)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchh--hc-cCcHHHHHh--hc----cc---cCCCCH
Confidence            334579999999999998887653   69999999999986642110  00 000000000  00    01   134689


Q ss_pred             HHHHHHHHHHHhcCC
Q 022414          248 SDMVDGLIRLMEGEN  262 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~  262 (297)
                      +|+|+++++++..+.
T Consensus       210 ~dvA~~~~~l~~~~~  224 (248)
T PRK10538        210 EDVSEAVWWVATLPA  224 (248)
T ss_pred             HHHHHHHHHHhcCCC
Confidence            999999999998664

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.80  E-value=1.8e-17  Score=141.35  Aligned_cols=179  Identities=15%  Similarity=0.124  Sum_probs=124.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc------------CC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ++++++||||+|+||.++++.|+++| ++|++++|+.....+....+. ....+.++.+|+++...            .+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRG-WHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 999999986433222222211 12357888999987621            24


Q ss_pred             cCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHHHH----cC---CeEEEEecceeecCCC--C--CCCCC
Q 022414           98 VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKR----VG---ARILLTSTSEVYGDPL--V--HPQDE  161 (297)
Q Consensus        98 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~r~v~~Ss~~~~~~~~--~--~~~~e  161 (297)
                      +|++||+||.....     ...+.++..+++|+.++..+++++.+    .+   .|+|++||...+....  .  .+..+
T Consensus        84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~  163 (322)
T PRK07453         84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA  163 (322)
T ss_pred             ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence            89999999965321     12345677889999999888887754    22   3899999976543110  0  00000


Q ss_pred             C--C-------------CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh----CCcEEEEeeccccCCC
Q 022414          162 S--Y-------------WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH----GIEIRIARIFNTYGPR  210 (297)
Q Consensus       162 ~--~-------------~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ivrp~~v~G~~  210 (297)
                      +  .             +....+..+...|+.||.+.+.+.+.++++.    ++.++.++||.|++..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            0  0             0011234566789999999998888877653    6999999999998654

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8e-18  Score=138.65  Aligned_cols=212  Identities=16%  Similarity=0.086  Sum_probs=140.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-C-CCceEEEecccCCcc--------------
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G-HPRFELIRHDVTEPL--------------   94 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~--------------   94 (297)
                      ++|+++||||+|+||+++++.|.+.| ++|++..+......+.....+ . ...+..+.+|+++..              
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDG-ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            46899999999999999999999999 888887543211111111111 1 124567788887641              


Q ss_pred             ----cCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCC
Q 022414           95 ----LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        95 ----~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                          ..++|++||+||.......    .++....+++|+.++..+++++.+.-   .++|++||...+.           
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  150 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI-----------  150 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc-----------
Confidence                1269999999996533222    22346677899999999998775532   3899999987642           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHH-HHHHHHHcCCCeEEecCCc
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVS-NFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  239 (297)
                           +......|+.+|.+.+.+++.++.+   .+++++.+.|+.+.++....    ... ..........        .
T Consensus       151 -----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~--------~  213 (252)
T PRK12747        151 -----SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE----LLSDPMMKQYATTI--------S  213 (252)
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh----cccCHHHHHHHHhc--------C
Confidence                 2223357999999999999988765   37999999999998874211    100 0111111100        0


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ....+..++|+|+++.+++....   .| .+.+.+|
T Consensus       214 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg  249 (252)
T PRK12747        214 AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  249 (252)
T ss_pred             cccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCC
Confidence            11246789999999999887543   34 4555544

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.3e-17  Score=136.02  Aligned_cols=202  Identities=14%  Similarity=0.037  Sum_probs=140.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      ++++|+||||+|++|+++++.|+++| ++|++++|+.....+....+.....+.++++|+.+..            ..++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEG-YKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCC-CEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 8999999865322222122211146888999998762            1269


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH---cCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR---VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      |+|||++|......    ..++..+.+++|+.+...+++++.+   .+. ++|++||...+.                +.
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------~~  147 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN----------------FF  147 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc----------------CC
Confidence            99999998654322    2233556788999999988888754   233 799999876532                22


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      .....|..+|.+.+.+.+.+..+   .+++++.+||+.+.++......             ..       ..  ...+..
T Consensus       148 ~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-------------~~-------~~--~~~~~~  205 (237)
T PRK07326        148 AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-------------SE-------KD--AWKIQP  205 (237)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc-------------ch-------hh--hccCCH
Confidence            23456999999999888877643   4899999999988765421100             00       00  013688


Q ss_pred             HHHHHHHHHHHhcCC---CccEEecCC
Q 022414          248 SDMVDGLIRLMEGEN---TGPINIGNP  271 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~---~~~~~i~~~  271 (297)
                      +|++++++.++..+.   .....+..+
T Consensus       206 ~d~a~~~~~~l~~~~~~~~~~~~~~~~  232 (237)
T PRK07326        206 EDIAQLVLDLLKMPPRTLPSKIEVRPS  232 (237)
T ss_pred             HHHHHHHHHHHhCCccccccceEEecC
Confidence            999999999998876   334444433

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.7e-18  Score=137.75  Aligned_cols=200  Identities=14%  Similarity=0.096  Sum_probs=134.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc--------CCcCEEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIYH  103 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~--------~~~d~vi~  103 (297)
                      +|+++||||+|++|+++++.|+++  ++|++++|+..... .+.+.  ...+.++++|+.+...        .++|+|||
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~--~~V~~~~r~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   77 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT--HTLLLGGRPAERLD-ELAAE--LPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH   77 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh--CCEEEEeCCHHHHH-HHHHH--hccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence            579999999999999999999988  78999998643211 11111  1357889999987521        15999999


Q ss_pred             ccCCCCCccc----ccChhhhHHHhHHH----HHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414          104 LACPASPIFY----KYNPVKTIKTNVIG----TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus       104 ~a~~~~~~~~----~~~~~~~~~~n~~~----~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      ++|.......    .++....++.|+.+    ...+++++++.+.++|++||...++.                ..+...
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~----------------~~~~~~  141 (227)
T PRK08219         78 NAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRA----------------NPGWGS  141 (227)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCc----------------CCCCch
Confidence            9987543221    12344557777777    45555555666668999999876532                223356


Q ss_pred             HHHhHHHHHHHHHHHHHH-hC-CcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHH
Q 022414          176 YDEGKRVAETLMFDYHRQ-HG-IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~-~~-~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                      |+.+|...+.+++.+..+ .. +++..++|+.+.++..        ..+...  .+.  .     .....+++++|+|++
T Consensus       142 y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~--------~~~~~~--~~~--~-----~~~~~~~~~~dva~~  204 (227)
T PRK08219        142 YAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ--------RGLVAQ--EGG--E-----YDPERYLRPETVAKA  204 (227)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh--------hhhhhh--hcc--c-----cCCCCCCCHHHHHHH
Confidence            999999999988877654 24 7888888876654321        111110  011  0     112357999999999


Q ss_pred             HHHHHhcCCC-ccEEec
Q 022414          254 LIRLMEGENT-GPINIG  269 (297)
Q Consensus       254 ~~~~~~~~~~-~~~~i~  269 (297)
                      ++.+++++.. ..+++.
T Consensus       205 ~~~~l~~~~~~~~~~~~  221 (227)
T PRK08219        205 VRFAVDAPPDAHITEVV  221 (227)
T ss_pred             HHHHHcCCCCCccceEE
Confidence            9999998763 355553

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.79  E-value=1.3e-17  Score=136.86  Aligned_cols=210  Identities=17%  Similarity=0.150  Sum_probs=136.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCCCccchhhhcC--CCceEEEecccCCcc------------cC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~   96 (297)
                      +++++||||+|+||+++++.|+++| ++|+++ .|+..... .....+.  ...+..+++|+++..            ..
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEG-YTVAVNYQQNLHAAQ-EVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCChHHHH-HHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            3679999999999999999999999 888774 44322111 1111111  135778899998762            23


Q ss_pred             CcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc--------CCeEEEEecceeecCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV--------GARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      ++|++||++|......     ..++....+++|+.++..+++++.+.        +.+||++||...+...         
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~---------  149 (247)
T PRK09730         79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA---------  149 (247)
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC---------
Confidence            5899999998653221     12234567889999988777665432        1369999997653211         


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                           + .....|+.+|...+.+++.+..+   .+++++.+||+.+|+|......   .+..........++.       
T Consensus       150 -----~-~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~---~~~~~~~~~~~~~~~-------  213 (247)
T PRK09730        150 -----P-GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG---EPGRVDRVKSNIPMQ-------  213 (247)
T ss_pred             -----C-CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC---CHHHHHHHHhcCCCC-------
Confidence                 1 11134999999999998877654   4899999999999998632211   111222222222111       


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGN  270 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~  270 (297)
                        ....++|+|+++++++..+.   .| .+.+.+
T Consensus       214 --~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  245 (247)
T PRK09730        214 --RGGQPEEVAQAIVWLLSDKASYVTGSFIDLAG  245 (247)
T ss_pred             --CCcCHHHHHHHHHhhcChhhcCccCcEEecCC
Confidence              12378999999999887652   44 445444

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.79  E-value=9.8e-18  Score=137.96  Aligned_cols=211  Identities=11%  Similarity=0.051  Sum_probs=143.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+|+++||||+|.||+++++.|+++| ++|++++|...   +.......  ..++.++.+|+++..            .
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G-~~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAG-ADIVGVGVAEA---PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEecCchH---HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 99998887532   11111111  235778899999862            2


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      .++|++||+||......    ..+++...+++|+.++..+.+++.+    .+  -++|++||...+..            
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~------------  149 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG------------  149 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC------------
Confidence            35899999999754322    2345667889999998888776633    33  38999999876531            


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                          ......|+.+|.+.+.+.+.++.+   .+++++.++||.+-.+.......  .......+....+.         .
T Consensus       150 ----~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~p~---------~  214 (251)
T PRK12481        150 ----GIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA--DTARNEAILERIPA---------S  214 (251)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc--ChHHHHHHHhcCCC---------C
Confidence                112246999999999999888764   48999999999887653211000  01111112221111         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      .+...+|+|+++.+++....   .| .+.+.+|
T Consensus       215 ~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        215 RWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             CCcCHHHHHHHHHHHhCccccCcCCceEEECCC
Confidence            35789999999999997543   44 4455443

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.9e-18  Score=139.01  Aligned_cols=217  Identities=13%  Similarity=0.009  Sum_probs=145.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.   ...++.++++|+++..            
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREG-AAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999 999999986533222222221   1235778999998762            


Q ss_pred             cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ..++|++||+||......    ..+++...+++|+.++..+++++.+    .+. ++|++||...+.             
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  150 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK-------------  150 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc-------------
Confidence            136999999999654322    2344667788999999888887643    444 899999976532             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCCh--hHHHHHHHHHHcCCCeEEecCCce
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                         +......|+.+|.+.+.+.+.++.+.   +++++.++||.+-.+.......  .-............++        
T Consensus       151 ---~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------  219 (260)
T PRK07063        151 ---IIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM--------  219 (260)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC--------
Confidence               22233569999999999999888763   6999999999886553110000  0000011111111111        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                       ..+..++|+|+++++++....   .| .+.+.+|.
T Consensus       220 -~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        220 -KRIGRPEEVAMTAVFLASDEAPFINATCITIDGGR  254 (260)
T ss_pred             -CCCCCHHHHHHHHHHHcCccccccCCcEEEECCCe
Confidence             135678999999999998654   44 45555543

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.3e-17  Score=137.31  Aligned_cols=200  Identities=16%  Similarity=0.089  Sum_probs=138.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cCCcC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LIEVD   99 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~~~d   99 (297)
                      |+|+||||+|+||+++++.|+++| ++|++++|+.....+....... ...+.++++|+.+..            ..++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREG-WRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999999 9999999865433222222211 246778899998752            13699


Q ss_pred             EEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHH----HHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      ++||+||........    ++....+++|+.++..+.+.    +++.+. ++|++||...+.                +.
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------~~  143 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM----------------QG  143 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC----------------CC
Confidence            999999976543322    23445678888877776655    456665 899999976542                22


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      ...+.|+.+|.+.+.+.+.+..+   .++++++++|+.+.++......  .............             ..++
T Consensus       144 ~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------------~~~~  210 (270)
T PRK05650        144 PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLE-------------KSPI  210 (270)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhh-------------cCCC
Confidence            33467999999999998888776   3799999999999877532211  0111111111111             1347


Q ss_pred             eHHHHHHHHHHHHhcCC
Q 022414          246 YVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~  262 (297)
                      +++|+|+.++.+++++.
T Consensus       211 ~~~~vA~~i~~~l~~~~  227 (270)
T PRK05650        211 TAADIADYIYQQVAKGE  227 (270)
T ss_pred             CHHHHHHHHHHHHhCCC
Confidence            89999999999998753

>PRK08589 short chain dehydrogenase; Validated

Probab=99.79  E-value=1.6e-17  Score=138.30  Aligned_cols=218  Identities=17%  Similarity=0.104  Sum_probs=141.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .+|+++||||+|+||+++++.|+++| ++|++++|+ ....+....... ..++..+.+|+++..            ..+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G-~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEG-AYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999 999999986 222221222211 235788999998762            225


Q ss_pred             cCEEEEccCCCCCc-c----cccChhhhHHHhHHHHHHHHHHH----HHcCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPI-F----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||..... .    ..+.....+++|+.+...+++++    ++.+.++|++||...+.                
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  146 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQA----------------  146 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcC----------------
Confidence            89999999975321 1    12234566788988887666665    34445899999976542                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|+.+|.+.+.+++.++.+   .+++++.+.||.+..+............+...........     .....+.
T Consensus       147 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  221 (272)
T PRK08589        147 ADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM-----TPLGRLG  221 (272)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc-----CCCCCCc
Confidence            1222356999999999999988865   3699999999998766421100000000011111000000     0011356


Q ss_pred             eHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          246 YVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      .++|+|+++++++....   .| .+.+.++
T Consensus       222 ~~~~va~~~~~l~s~~~~~~~G~~i~vdgg  251 (272)
T PRK08589        222 KPEEVAKLVVFLASDDSSFITGETIRIDGG  251 (272)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence            89999999999987643   44 4555554

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.2e-17  Score=136.15  Aligned_cols=215  Identities=13%  Similarity=0.048  Sum_probs=142.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+++++||||+|+||.++++.|.+.| ++|++++|+.....+....+.. ..++.++.+|+++..            ..
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREG-AKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            357899999999999999999999999 8999999975432222222111 135778899998762            22


Q ss_pred             CcCEEEEccCCCCCc-c----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPI-F----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||+||..... .    ..++....+++|+.+...+.+++    ++.+. ++|++||...+..             
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~-------------  149 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA-------------  149 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc-------------
Confidence            689999999975321 1    22345677899998777665544    44544 8999999765421             


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+.   +++++.++||.+-.+.......  .......+....+.         ..
T Consensus       150 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~~  216 (254)
T PRK07478        150 --GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD--TPEALAFVAGLHAL---------KR  216 (254)
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC--CHHHHHHHHhcCCC---------CC
Confidence              12234679999999999999887763   6999999999987663211000  01111111111111         23


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +..++|+|+++++++..+.   .| .+.+.++
T Consensus       217 ~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  248 (254)
T PRK07478        217 MAQPEEIAQAALFLASDAASFVTGTALLVDGG  248 (254)
T ss_pred             CcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence            5678999999999997654   34 4555544

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.4e-17  Score=135.84  Aligned_cols=214  Identities=19%  Similarity=0.142  Sum_probs=142.7

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..++++++||||+|+||.++++.|++.| ++|++++|+.....+....... ...+.++++|+.+..            .
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQG-AHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4567999999999999999999999999 8999999864322221221111 134678899998762            1


Q ss_pred             CCcCEEEEccCCCCC-----cccccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ..+|++||+||....     ....++.+..++.|+.+...+++++    ++.+. +++++||...+.             
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------------  150 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS-------------  150 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC-------------
Confidence            258999999985421     1122335567889999988877666    44444 799998865431             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                         +..+...|+.+|.+.+.+++.+..+   .+++++.+.||.+..+........  ...........+         ..
T Consensus       151 ---~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~  216 (252)
T PRK07035        151 ---PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN--DAILKQALAHIP---------LR  216 (252)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC--HHHHHHHHccCC---------CC
Confidence               2233467999999999999988765   379999999998876532111000  111122222111         12


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---Cc-cEEecC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TG-PINIGN  270 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~  270 (297)
                      .+..++|+|+++.+++.+..   .| .+.+.+
T Consensus       217 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dg  248 (252)
T PRK07035        217 RHAEPSEMAGAVLYLASDASSYTTGECLNVDG  248 (252)
T ss_pred             CcCCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence            35678999999999998654   44 455544

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.79  E-value=1.9e-17  Score=136.83  Aligned_cols=212  Identities=13%  Similarity=0.132  Sum_probs=144.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~------------   95 (297)
                      ..+++++||||+|+||.++++.|++.| +.|+++.|+.  ..+.+.+.+.  ...+.++++|+++...            
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G-~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAG-ADIIITTHGT--NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCc--HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 9999998862  2222222221  2357889999997631            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++||++|......    ..++++..+++|+.+...+.+++.    +.+. ++|++||...+..             
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  156 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG-------------  156 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC-------------
Confidence            25899999999754322    233456678899999877776664    4444 8999999876521             


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                         ......|+.+|.+.+.+++.++++   .+++++.++||.+..+........  ...........+         ...
T Consensus       157 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~  222 (258)
T PRK06935        157 ---GKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD--KNRNDEILKRIP---------AGR  222 (258)
T ss_pred             ---CCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC--hHHHHHHHhcCC---------CCC
Confidence               122356999999999999988875   379999999999877642111000  011111111111         123


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +...+|+|+.+.+++....   .| ++.+.+|
T Consensus       223 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  254 (258)
T PRK06935        223 WGEPDDLMGAAVFLASRASDYVNGHILAVDGG  254 (258)
T ss_pred             CCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            6788999999999887653   33 5555554

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.8e-17  Score=133.07  Aligned_cols=203  Identities=18%  Similarity=0.135  Sum_probs=139.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-----------CCcC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----------IEVD   99 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-----------~~~d   99 (297)
                      .+|+++||||+|+||+++++.|+++| ++|+++.|+....          ...+++.+|+++...           .++|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G-~~v~~~~r~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   70 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLG-HQVIGIARSAIDD----------FPGELFACDLADIEQTAATLAQINEIHPVD   70 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCC-CEEEEEeCCcccc----------cCceEEEeeCCCHHHHHHHHHHHHHhCCCc
Confidence            36899999999999999999999999 9999999965331          112467889887621           2589


Q ss_pred             EEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      ++||++|......    ..+++...++.|+.+...+.+++    ++.+. ++|++||...++..                
T Consensus        71 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------  134 (234)
T PRK07577         71 AIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL----------------  134 (234)
T ss_pred             EEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC----------------
Confidence            9999999765432    22345567888888877776665    44555 89999998765321                


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                       ....|..+|...+.+.+.++.+   .+++++.++|+.+..+..... ..........+....+.         ......
T Consensus       135 -~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~  203 (234)
T PRK07577        135 -DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQT-RPVGSEEEKRVLASIPM---------RRLGTP  203 (234)
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccc-cccchhHHHHHhhcCCC---------CCCcCH
Confidence             1356999999999998887654   489999999999887652111 00011111122222111         124478


Q ss_pred             HHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          248 SDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +|+|++++.++..+.   .| .+.+.++
T Consensus       204 ~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (234)
T PRK07577        204 EEVAAAIAFLLSDDAGFITGQVLGVDGG  231 (234)
T ss_pred             HHHHHHHHHHhCcccCCccceEEEecCC
Confidence            999999999998653   34 4555544

>PRK08643 acetoin reductase; Validated

Probab=99.79  E-value=1.7e-17  Score=136.99  Aligned_cols=214  Identities=18%  Similarity=0.138  Sum_probs=140.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      +++++||||+|+||+++++.|+++| ++|++++|+.....+....... ..++.++++|+++..            ..++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDG-FKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999 8999999864332222111111 235778899999862            1358


Q ss_pred             CEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        99 d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      |++|||||.......    .++....+++|+.++..+++++.+    .+  .++|++||...+.                
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------  144 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV----------------  144 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc----------------
Confidence            999999986543221    233556788999988777766643    22  3899999876432                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhH------HHHH-HHHHHcCCCeEEecCC
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRV------VSNF-IAQAIRGEPLTVQAPG  238 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~  238 (297)
                      +......|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++.........      ...+ .......  ++     
T Consensus       145 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----  217 (256)
T PRK08643        145 GNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD--IT-----  217 (256)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc--CC-----
Confidence            1112356999999999998888764   4799999999998876421000000      0000 0001110  00     


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                        ...+...+|+|+++.+++....   +| .+.+.+|
T Consensus       218 --~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg  252 (256)
T PRK08643        218 --LGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGG  252 (256)
T ss_pred             --CCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence              1135678999999999997653   45 4555544

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.79  E-value=3.6e-17  Score=135.10  Aligned_cols=217  Identities=13%  Similarity=0.067  Sum_probs=147.0

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc-----------
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~-----------   94 (297)
                      .+...+|+++||||+|+||+++++.|+++| +.|++++|+.....+....+.. ..++.++.+|+++..           
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAG-AHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            445678999999999999999999999999 9999999964322221111111 235788999998762           


Q ss_pred             -cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       ..++|++||++|......    ..+++...+..|+.++..+.+.+.+    .+. ++|++||...+.            
T Consensus        85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------------  152 (256)
T PRK06124         85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV------------  152 (256)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc------------
Confidence             125799999999754322    2234556788999998888866643    555 899999876531            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                          +......|..+|.+.+.+.+.++.+   .++++..++|+.+.++......  ....+...+....  +.       
T Consensus       153 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~--~~-------  217 (256)
T PRK06124        153 ----ARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMA--ADPAVGPWLAQRT--PL-------  217 (256)
T ss_pred             ----CCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhc--cChHHHHHHHhcC--CC-------
Confidence                1222357999999999998887654   3799999999999887521100  0011212222211  11       


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC---CccE-EecCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN---TGPI-NIGNP  271 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~---~~~~-~i~~~  271 (297)
                      ..+++++|++++++.++..+.   +|.+ .+.+|
T Consensus       218 ~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        218 GRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGG  251 (256)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCC
Confidence            237889999999999998764   4544 44443

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.5e-17  Score=136.11  Aligned_cols=195  Identities=13%  Similarity=0.061  Sum_probs=137.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~   96 (297)
                      .+++++||||+|++|+++++.|+++| ++|++++|+.....+ +...+.  ...+.++.+|+++..            ..
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAG-WDLALVARSQDALEA-LAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999 899999996533222 211111  136788999998763            12


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||++|......    ..++....+++|+.+...+++.+    ++.+. ++|++||...++               
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------  147 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN---------------  147 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc---------------
Confidence            5899999998654322    22345667889999888877665    44444 899999987653               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|+.+|.+.+.+.+.+..+   .+++++++||+.+-.+.....               .....    .....+
T Consensus       148 -~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~---------------~~~~~----~~~~~~  207 (241)
T PRK07454        148 -AFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE---------------TVQAD----FDRSAM  207 (241)
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc---------------ccccc----cccccC
Confidence             2223456999999999998877643   489999999998876642110               00000    001235


Q ss_pred             eeHHHHHHHHHHHHhcCC
Q 022414          245 CYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~  262 (297)
                      +..+|+|+++++++..+.
T Consensus       208 ~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        208 LSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             CCHHHHHHHHHHHHcCCc
Confidence            789999999999999875

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.78  E-value=2.8e-17  Score=135.51  Aligned_cols=207  Identities=12%  Similarity=0.064  Sum_probs=141.6

Q ss_pred             cccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc----------
Q 022414           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL----------   94 (297)
Q Consensus        26 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~----------   94 (297)
                      +.+...+++++|||++|.||+++++.|.+.| ++|+++++...  .+....... ...+..+++|+++..          
T Consensus         4 ~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G-~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   80 (253)
T PRK08993          4 DAFSLEGKVAVVTGCDTGLGQGMALGLAEAG-CDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAV   80 (253)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            3445668999999999999999999999999 99988876432  111111111 235778899998752          


Q ss_pred             --cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                        ..++|++|||||......    ..+++...+++|+.+...+++++.+    .+  .++|++||...+...        
T Consensus        81 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  152 (253)
T PRK08993         81 AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG--------  152 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC--------
Confidence              236999999999754322    2345777889999999988887743    33  379999998765321        


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                              .....|+.+|.+.+.+.+.++.+   .+++++.++||.+..+.......  .......+...  .+.     
T Consensus       153 --------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~--~~~~~~~~~~~--~p~-----  215 (253)
T PRK08993        153 --------IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRA--DEQRSAEILDR--IPA-----  215 (253)
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhcc--chHHHHHHHhc--CCC-----
Confidence                    12246999999999999888766   47999999999987654211000  00111112211  111     


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                        ..+...+|+|+.+.+++....
T Consensus       216 --~r~~~p~eva~~~~~l~s~~~  236 (253)
T PRK08993        216 --GRWGLPSDLMGPVVFLASSAS  236 (253)
T ss_pred             --CCCcCHHHHHHHHHHHhCccc
Confidence              136778999999999998654

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.9e-17  Score=137.06  Aligned_cols=214  Identities=17%  Similarity=0.132  Sum_probs=143.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+++++||||+|+||+++++.|+++| ++|++++|+..... .+.+.. ..++.++++|+++..            ...
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   80 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAG-ARVAIVDIDADNGA-AVAASL-GERARFIATDITDDAAIERAVATVVARFGR   80 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHh-CCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999 89999999643222 122222 235788999999862            235


Q ss_pred             cCEEEEccCCCCCc---ccccChhhhHHHhHHHHHHHHHHHHH---c-CCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPI---FYKYNPVKTIKTNVIGTLNMLGLAKR---V-GARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        98 ~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~---~-~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      +|++||+||.....   ...+++...+++|+.+...+++++.+   . +.++|++||.....                +.
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----------------~~  144 (261)
T PRK08265         81 VDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF----------------AQ  144 (261)
T ss_pred             CCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc----------------CC
Confidence            89999999864322   12344667788999999888887653   2 23899999876531                11


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      .....|..+|...+.+.+.++.+   .+++++.++|+.+..+......... .......... ..       ....+...
T Consensus       145 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~-~~~~~~~~~~-~~-------p~~r~~~p  215 (261)
T PRK08265        145 TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGD-RAKADRVAAP-FH-------LLGRVGDP  215 (261)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccc-hhHHHHhhcc-cC-------CCCCccCH
Confidence            22356999999999999888765   3799999999987665321000000 0000111100 00       11235678


Q ss_pred             HHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          248 SDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +|+|+++++++....   .| .+.+.+|
T Consensus       216 ~dva~~~~~l~s~~~~~~tG~~i~vdgg  243 (261)
T PRK08265        216 EEVAQVVAFLCSDAASFVTGADYAVDGG  243 (261)
T ss_pred             HHHHHHHHHHcCccccCccCcEEEECCC
Confidence            999999999998643   33 5666655

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=3.8e-17  Score=133.20  Aligned_cols=206  Identities=15%  Similarity=0.109  Sum_probs=142.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYH  103 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi~  103 (297)
                      .++|+++||||+|+||+++++.|+++| ++|++++|+.....        ...+.++.+|+.+.      ...++|++||
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G-~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~id~lv~   73 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQG-AQVYGVDKQDKPDL--------SGNFHFLQLDLSDDLEPLFDWVPSVDILCN   73 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCC-CEEEEEeCCccccc--------CCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence            457899999999999999999999999 89999988642210        23577888998765      1236899999


Q ss_pred             ccCCCCC-----cccccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCC
Q 022414          104 LACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (297)
Q Consensus       104 ~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  173 (297)
                      +||....     ....+++...+++|+.++..+++++..    .+. ++|++||...+..                ....
T Consensus        74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~~~  137 (235)
T PRK06550         74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA----------------GGGG  137 (235)
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC----------------CCCC
Confidence            9985421     112344667889999999999888753    333 7999999765421                1123


Q ss_pred             ChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHH
Q 022414          174 SCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (297)
Q Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  250 (297)
                      ..|+.+|...+.+.+.++.+.   +++++.++|+.+.++.......  ...+...+....+         ...+...+|+
T Consensus       138 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~  206 (235)
T PRK06550        138 AAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE--PGGLADWVARETP---------IKRWAEPEEV  206 (235)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC--chHHHHHHhccCC---------cCCCCCHHHH
Confidence            569999999999988887654   7999999999998875321100  0111122222211         1236788999


Q ss_pred             HHHHHHHHhcCC---Cc-cEEecCC
Q 022414          251 VDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       251 a~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      |+++++++....   .| .+.+.+|
T Consensus       207 a~~~~~l~s~~~~~~~g~~~~~~gg  231 (235)
T PRK06550        207 AELTLFLASGKADYMQGTIVPIDGG  231 (235)
T ss_pred             HHHHHHHcChhhccCCCcEEEECCc
Confidence            999999997543   33 4455543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=1.2e-17  Score=136.42  Aligned_cols=195  Identities=15%  Similarity=0.039  Sum_probs=138.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------cCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .+++++||||+|+||.+++++|+++| ++|++++|+.....+...... ...++.++.+|+++..            ..+
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEG-VNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 899999997543222111111 1236788899998763            136


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||++|......    ..++....+++|+.++..+.+++..    .+. ++|++||...+.                
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~----------------  148 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK----------------  148 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc----------------
Confidence            999999998754322    2233556789999998888887753    444 799998876542                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +..+...|+.+|.+.+.+++.++.+   .++++++++|+.+.++.....              .  ... +.   ...++
T Consensus       149 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~--------------~--~~~-~~---~~~~~  208 (239)
T PRK07666        149 GAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL--------------G--LTD-GN---PDKVM  208 (239)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc--------------c--ccc-cC---CCCCC
Confidence            1223356999999999998877654   479999999999887642100              0  000 11   12357


Q ss_pred             eHHHHHHHHHHHHhcCC
Q 022414          246 YVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~  262 (297)
                      ..+|+|+++..++..+.
T Consensus       209 ~~~~~a~~~~~~l~~~~  225 (239)
T PRK07666        209 QPEDLAEFIVAQLKLNK  225 (239)
T ss_pred             CHHHHHHHHHHHHhCCC
Confidence            89999999999998763

>PRK12742 oxidoreductase; Provisional

Probab=99.78  E-value=2.9e-17  Score=134.05  Aligned_cols=207  Identities=16%  Similarity=0.122  Sum_probs=139.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~vi  102 (297)
                      ++|+|+||||+|+||+++++.|+++| ++|+++.+......+.+..   ..++..+.+|+++..        ..++|++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G-~~v~~~~~~~~~~~~~l~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDG-ANVRFTYAGSKDAAERLAQ---ETGATAVQTDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEecCCCHHHHHHHHH---HhCCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence            47899999999999999999999999 8888876642222122211   224567788987752        23589999


Q ss_pred             EccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      |+||......    ..+++...+++|+.++..+++.+.+.   +.++|++||.....               .+..+...
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---------------~~~~~~~~  145 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR---------------MPVAGMAA  145 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc---------------CCCCCCcc
Confidence            9998754322    23446778899999998887666543   23899999965311               12334567


Q ss_pred             HHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHH
Q 022414          176 YDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      |+.+|.+.+.+++.++.+   .+++++.++||.+..+.... ...    .........++         ..+...+|+|+
T Consensus       146 Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~-~~~----~~~~~~~~~~~---------~~~~~p~~~a~  211 (237)
T PRK12742        146 YAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPA-NGP----MKDMMHSFMAI---------KRHGRPEEVAG  211 (237)
T ss_pred             hHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccc-ccH----HHHHHHhcCCC---------CCCCCHHHHHH
Confidence            999999999999887765   47999999999997764211 111    11111111111         13568899999


Q ss_pred             HHHHHHhcCC---Cc-cEEecC
Q 022414          253 GLIRLMEGEN---TG-PINIGN  270 (297)
Q Consensus       253 ~~~~~~~~~~---~~-~~~i~~  270 (297)
                      ++.+++....   .| .+.+.+
T Consensus       212 ~~~~l~s~~~~~~~G~~~~~dg  233 (237)
T PRK12742        212 MVAWLAGPEASFVTGAMHTIDG  233 (237)
T ss_pred             HHHHHcCcccCcccCCEEEeCC
Confidence            9999987654   44 444444

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=3.5e-17  Score=134.80  Aligned_cols=211  Identities=12%  Similarity=0.087  Sum_probs=143.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+++++|||++|+||.++++.|+++| +.|++++|+.....+....... ...+.++++|+++...            .
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKG-AKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999 8999999864322222111111 2357788999987521            3


Q ss_pred             CcCEEEEccCCCCCcc-------------cccChhhhHHHhHHHHHHHHHHHH----Hc-C-CeEEEEecceeecCCCCC
Q 022414           97 EVDQIYHLACPASPIF-------------YKYNPVKTIKTNVIGTLNMLGLAK----RV-G-ARILLTSTSEVYGDPLVH  157 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~----~~-~-~r~v~~Ss~~~~~~~~~~  157 (297)
                      ++|+|||++|......             ..++....++.|+.+...+.+.+.    +. . .+++++||...++.    
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~----  157 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN----  157 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC----
Confidence            5899999998643211             123345567889988877665443    22 2 26888988765532    


Q ss_pred             CCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEE
Q 022414          158 PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV  234 (297)
Q Consensus       158 ~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (297)
                                   .+...|+.+|.+.+.+++.+..+   .+++++.++|+.+.++....    ..+..........+.  
T Consensus       158 -------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~----~~~~~~~~~~~~~~~--  218 (253)
T PRK08217        158 -------------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA----MKPEALERLEKMIPV--  218 (253)
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc----cCHHHHHHHHhcCCc--
Confidence                         12356999999999999888764   47999999999998775321    112222222222211  


Q ss_pred             ecCCceeEeeeeHHHHHHHHHHHHhcCC-C-ccEEecCC
Q 022414          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN-T-GPINIGNP  271 (297)
Q Consensus       235 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~-~~~~i~~~  271 (297)
                             ..+.+++|+|+++..++.... + ..+++.++
T Consensus       219 -------~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg  250 (253)
T PRK08217        219 -------GRLGEPEEIAHTVRFIIENDYVTGRVLEIDGG  250 (253)
T ss_pred             -------CCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCC
Confidence                   235689999999999997644 3 47777765

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.78  E-value=4.8e-17  Score=133.51  Aligned_cols=211  Identities=15%  Similarity=0.109  Sum_probs=139.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC-CCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      .+|.++|||++|+||+++++.|+++| +.|+++.+... ...+.+..... ...+..+.+|+.+..            ..
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G-~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDG-FKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcC-CEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            36889999999999999999999999 88877554322 11112222111 235667789998762            23


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||+||......    ..+++...+++|+.++..+.+++    ++.+. ++|++||.....               
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------  145 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK---------------  145 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC---------------
Confidence            6899999999754321    23446677889999876665554    45665 899999875431               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|..+|.+.+.+.+.+.++   .+++++.++|+.+.++....    ..+..+..+....+.         ..+
T Consensus       146 -~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~----~~~~~~~~~~~~~~~---------~~~  211 (246)
T PRK12938        146 -GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA----IRPDVLEKIVATIPV---------RRL  211 (246)
T ss_pred             -CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh----cChHHHHHHHhcCCc---------cCC
Confidence             2223467999999999988877654   47999999999988765311    112222222222211         235


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      ...+|+++++++++..+.    +..+.+.++
T Consensus       212 ~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        212 GSPDEIGSIVAWLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             cCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence            678999999999887653    334555543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.78  E-value=4.1e-17  Score=135.46  Aligned_cols=219  Identities=13%  Similarity=0.014  Sum_probs=146.0

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc-----------
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~-----------   94 (297)
                      .+...+++++||||+|+||.++++.|+++| ++|+++.|+.....+....+.. ..++.++++|+++..           
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G-~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAG-ATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            345567999999999999999999999999 8999998864332222211111 125788999998762           


Q ss_pred             -cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       ..++|++||+||......    ..++....+++|+.++..+.+++.+    .+. ++|++||.....            
T Consensus        84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------  151 (265)
T PRK07097         84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL------------  151 (265)
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC------------
Confidence             135899999999765432    2344566778999988877776643    444 899999865321            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCCh----hHHHHHHHHHHcCCCeEEecC
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG----RVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  237 (297)
                          +..+...|+.+|.+.+.+.+.++++.   +++++.++||.+.++.......    .-...+...+....+      
T Consensus       152 ----~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------  221 (265)
T PRK07097        152 ----GRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP------  221 (265)
T ss_pred             ----CCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC------
Confidence                11233569999999999999988764   7999999999998875321100    000001111111111      


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                         ...+...+|+|+.+.+++....   +| .+.+.++
T Consensus       222 ---~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg  256 (265)
T PRK07097        222 ---AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGG  256 (265)
T ss_pred             ---ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence               1235678999999999998643   44 4455554

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.7e-17  Score=135.54  Aligned_cols=212  Identities=18%  Similarity=0.085  Sum_probs=143.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+++++||||+|+||.++++.|+++| ++|++++|+.....+ +...+.  ..++..+.+|+++..            .
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAG-AQVAIAARHLDALEK-LADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCHHHHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            457999999999999999999999999 999999986433222 222211  135778899998762            1


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      .++|++|||||......    ..++....+++|+.+...+++++.+    .+  .+++++||....-.            
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------  152 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII------------  152 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC------------
Confidence            36999999999754322    2234556778999999888887743    33  36888888653210            


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        ........|+.+|.+.+.+.+.++.+   .+++++.++||.+-.+....    . ...........+.         .
T Consensus       153 --~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~----~-~~~~~~~~~~~~~---------~  216 (253)
T PRK05867        153 --NVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP----Y-TEYQPLWEPKIPL---------G  216 (253)
T ss_pred             --CCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc----c-hHHHHHHHhcCCC---------C
Confidence              00112356999999999999988765   47999999999987664211    1 1111122221111         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      .+..++|+|+++++++....   .| .+.+.+|
T Consensus       217 r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG  249 (253)
T PRK05867        217 RLGRPEELAGLYLYLASEASSYMTGSDIVIDGG  249 (253)
T ss_pred             CCcCHHHHHHHHHHHcCcccCCcCCCeEEECCC
Confidence            36789999999999997644   44 4566554

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.9e-17  Score=135.76  Aligned_cols=207  Identities=16%  Similarity=0.100  Sum_probs=141.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+|+|+||||+|+||+++++.|.+.| ++|+++.|+.....+ +...+.  ..++.++.+|+++..            .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G-~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAG-AKVVLASRRVERLKE-LRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            457999999999999999999999999 899999986433222 211111  235788899998752            1


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----c---------CCeEEEEecceeecCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V---------GARILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~---------~~r~v~~Ss~~~~~~~~~~~  158 (297)
                      .++|++||++|......    ..+++...++.|+.+...+++++..    .         +-++|++||...+.      
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------  158 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR------  158 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC------
Confidence            25899999999654322    1234666788999999888887743    2         12789999876542      


Q ss_pred             CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEe
Q 022414          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (297)
                                +......|+.+|.+.+.+++.++.+   .++++++++||+++++.....   +.......+....+    
T Consensus       159 ----------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~----  221 (258)
T PRK06949        159 ----------VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHH---WETEQGQKLVSMLP----  221 (258)
T ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhc---cChHHHHHHHhcCC----
Confidence                      2233467999999999999888765   379999999999998763211   11111111111111    


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC---CccE
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN---TGPI  266 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~  266 (297)
                           ...+...+|+++++.+++..+.   +|..
T Consensus       222 -----~~~~~~p~~~~~~~~~l~~~~~~~~~G~~  250 (258)
T PRK06949        222 -----RKRVGKPEDLDGLLLLLAADESQFINGAI  250 (258)
T ss_pred             -----CCCCcCHHHHHHHHHHHhChhhcCCCCcE
Confidence                 1235678999999999988543   5544

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.78  E-value=3.8e-17  Score=134.29  Aligned_cols=202  Identities=16%  Similarity=0.127  Sum_probs=132.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      +|+|+||||+|+||.++++.|+++| ++|+++.+......+.....+.  ..++.++++|+++..            ..+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARG-WSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999 8887765432222111111111  236788999998762            135


Q ss_pred             cCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHH----c----CCeEEEEecceee-cCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----V----GARILLTSTSEVY-GDPLVHPQDESY  163 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~----~~r~v~~Ss~~~~-~~~~~~~~~e~~  163 (297)
                      +|++||+||......     ..++....+++|+.+...+++.+.+    .    +.++|++||...+ +..         
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~---------  151 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP---------  151 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC---------
Confidence            999999999654321     2233456688999998888754432    1    1259999987543 211         


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                             .....|+.+|.+.+.+.+.++.+.   ++++++++|+.+..+.......   +..........++        
T Consensus       152 -------~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~--------  213 (248)
T PRK06947        152 -------NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQ---PGRAARLGAQTPL--------  213 (248)
T ss_pred             -------CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCC---HHHHHHHhhcCCC--------
Confidence                   112359999999999988887653   7999999999998875321111   1111111111111        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                       .....++|+|+.++.++..+.
T Consensus       214 -~~~~~~e~va~~~~~l~~~~~  234 (248)
T PRK06947        214 -GRAGEADEVAETIVWLLSDAA  234 (248)
T ss_pred             -CCCcCHHHHHHHHHHHcCccc
Confidence             124578999999999988764

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.78  E-value=7.8e-18  Score=139.12  Aligned_cols=207  Identities=15%  Similarity=0.098  Sum_probs=132.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc------CCcCEEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------IEVDQIYH  103 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~------~~~d~vi~  103 (297)
                      +++|+||||+|+||+++++.|++.| +.|+++.|+..... .+....  ...++.++.+|+++...      .++|+|||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G-~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~   79 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKG-HNVIAGVQIAPQVT-ALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN   79 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence            5789999999999999999999999 99999998643211 111111  12357888999987621      27999999


Q ss_pred             ccCCCCCccc----ccChhhhHHHhHHHHHHHHHH----HHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC
Q 022414          104 LACPASPIFY----KYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (297)
Q Consensus       104 ~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~  174 (297)
                      |||.......    .++....+++|+.+...+.+.    +++.+. ++|++||...+.                ......
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~----------------~~~~~~  143 (257)
T PRK09291         80 NAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI----------------TGPFTG  143 (257)
T ss_pred             CCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc----------------CCCCcc
Confidence            9997643222    223445677888877666554    455565 899999975432                112235


Q ss_pred             hHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCC-C-eEEecCCceeEeeeeHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE-P-LTVQAPGTQTRSFCYVSD  249 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~i~v~D  249 (297)
                      .|+.+|.+.|.+.+.+..+   .+++++.+||+.+..+..    ......+.. ..... . +.. .+..........+|
T Consensus       144 ~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~----~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~  217 (257)
T PRK09291        144 AYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFN----DTMAETPKR-WYDPARNFTDP-EDLAFPLEQFDPQE  217 (257)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccch----hhhhhhhhh-hcchhhHHHhh-hhhhccccCCCHHH
Confidence            6999999999988876654   589999999987744321    011111100 00000 0 000 01122234578999


Q ss_pred             HHHHHHHHHhcCC
Q 022414          250 MVDGLIRLMEGEN  262 (297)
Q Consensus       250 va~~~~~~~~~~~  262 (297)
                      +++.++.++..+.
T Consensus       218 ~~~~~~~~l~~~~  230 (257)
T PRK09291        218 MIDAMVEVIPADT  230 (257)
T ss_pred             HHHHHHHHhcCCC
Confidence            9999999887654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=4.1e-17  Score=133.91  Aligned_cols=212  Identities=13%  Similarity=0.060  Sum_probs=141.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCCCccchhhhc-CCCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------   95 (297)
                      .++++++||||+|+||.++++.|++.| ++|+++ .|+.....+...... ...++.++.+|+++...            
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g-~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEG-AKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999 889888 775432221111111 12357889999987631            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|+|||++|......    ..+.....++.|+.+...+++++..    .+. ++|++||...+..             
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-------------  148 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG-------------  148 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC-------------
Confidence            26999999999763221    2233566788999998888777754    444 7999998765421             


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                         ......|+.+|.+.+.+++.+..+   .+++++.++|+.+..+.....    .......+....         ....
T Consensus       149 ---~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~----~~~~~~~~~~~~---------~~~~  212 (247)
T PRK05565        149 ---ASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSF----SEEDKEGLAEEI---------PLGR  212 (247)
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccccc----ChHHHHHHHhcC---------CCCC
Confidence               112346999999999888877654   479999999999876542211    111111111111         0123


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +...+|+|++++.++....   +| .+++.++
T Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        213 LGKPEEIAKVVLFLASDDASYITGQIITVDGG  244 (247)
T ss_pred             CCCHHHHHHHHHHHcCCccCCccCcEEEecCC
Confidence            5688999999999987654   44 4555543

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.6e-17  Score=137.80  Aligned_cols=207  Identities=17%  Similarity=0.118  Sum_probs=141.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~   95 (297)
                      ...+++++||||+|.||.++++.|.++| ++|++++|+.....+ +...+. ...+..+.+|+++..            .
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~l~~-~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARG-AKLALVDLEEAELAA-LAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3457999999999999999999999999 899999986432222 112222 234556679998752            2


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      .++|++||+||......    ..++....+++|+.+...+++++..    .+-++|++||...+.               
T Consensus        84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~---------------  148 (296)
T PRK05872         84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFA---------------  148 (296)
T ss_pred             CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcC---------------
Confidence            36899999999754322    2234566788999999999888754    233799999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|+.+|...+.+.+.+..+   .++.+..+.|+++..+........  ......+....+.+       ...+
T Consensus       149 -~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~--~~~~~~~~~~~~~p-------~~~~  218 (296)
T PRK05872        149 -AAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD--LPAFRELRARLPWP-------LRRT  218 (296)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc--chhHHHHHhhCCCc-------ccCC
Confidence             2223457999999999999887654   579999999998876542111000  01111111111111       1246


Q ss_pred             eeHHHHHHHHHHHHhcCC
Q 022414          245 CYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~  262 (297)
                      +.++|+|++++.++....
T Consensus       219 ~~~~~va~~i~~~~~~~~  236 (296)
T PRK05872        219 TSVEKCAAAFVDGIERRA  236 (296)
T ss_pred             CCHHHHHHHHHHHHhcCC
Confidence            789999999999998764

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.5e-17  Score=133.59  Aligned_cols=194  Identities=13%  Similarity=0.080  Sum_probs=134.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC-Cccchhhhc--CCCceEEEecccCCccc-----------C
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG-SKDNLRKWI--GHPRFELIRHDVTEPLL-----------I   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~--~~~~~~~~~~Dl~~~~~-----------~   96 (297)
                      ..++|+||||+|+||++++++|+++|.++|++++|+... ..+...++.  ...++.++++|+++...           .
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            468999999999999999999999843899999997654 222222221  12368889999987531           2


Q ss_pred             CcCEEEEccCCCCCcc-cccCh---hhhHHHhHHHHHH----HHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF-YKYNP---VKTIKTNVIGTLN----MLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~-~~~~~---~~~~~~n~~~~~~----l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||++|...... .+.+.   .+.+++|+.++..    ++..+++.+. ++|++||...+.               
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~---------------  151 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER---------------  151 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC---------------
Confidence            6999999998754321 11222   2457899987765    5666677766 899999976431               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHH---HhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|+.+|.+...+.+.+..   ..++++++++||.+..+...               ....     .    ...
T Consensus       152 -~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~---------------~~~~-----~----~~~  206 (253)
T PRK07904        152 -VRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA---------------HAKE-----A----PLT  206 (253)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc---------------cCCC-----C----CCC
Confidence             112235699999999987766653   35899999999988764310               0000     0    124


Q ss_pred             eeHHHHHHHHHHHHhcCCCc
Q 022414          245 CYVSDMVDGLIRLMEGENTG  264 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~~~  264 (297)
                      +..+|+|+.++..+.++...
T Consensus       207 ~~~~~~A~~i~~~~~~~~~~  226 (253)
T PRK07904        207 VDKEDVAKLAVTAVAKGKEL  226 (253)
T ss_pred             CCHHHHHHHHHHHHHcCCCE
Confidence            68899999999999887543

>PRK07069 short chain dehydrogenase; Validated

Probab=99.77  E-value=1.9e-17  Score=136.34  Aligned_cols=203  Identities=16%  Similarity=0.103  Sum_probs=134.3

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC----CCceEEEecccCCcc------------cCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      +|+||||+|+||+++++.|+++| ++|++++|+.....+.+.+.+.    ...+..+++|+.+..            ..+
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQG-AKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            48999999999999999999999 9999999863222222222211    123445788998753            235


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHH----HHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVI----GTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~----~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||.......    .++....+++|+.    .+..++.++++.+. ++|++||...+..               
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~---------------  144 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA---------------  144 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC---------------
Confidence            8999999997653322    2234556778887    66777777777765 8999999876532               


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHh-----CCcEEEEeeccccCCCCCCCChhH-HHHHHHHHHcCCCeEEecCCceeE
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRV-VSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ivrp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                       ......|+.+|...+.+.+.++.+.     ++++..++|+.+.++......... .......+..+.+         ..
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~  214 (251)
T PRK07069        145 -EPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP---------LG  214 (251)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC---------CC
Confidence             1223569999999999998877652     388899999999887532100000 0011111111111         12


Q ss_pred             eeeeHHHHHHHHHHHHhcCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~  262 (297)
                      .+.+++|+|+++++++..+.
T Consensus       215 ~~~~~~~va~~~~~l~~~~~  234 (251)
T PRK07069        215 RLGEPDDVAHAVLYLASDES  234 (251)
T ss_pred             CCcCHHHHHHHHHHHcCccc
Confidence            35689999999999877653

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3.2e-17  Score=140.13  Aligned_cols=207  Identities=11%  Similarity=0.096  Sum_probs=139.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+++|+||||+|+||+++++.|+++| ++|++++|+.....+....... ..++.++.+|++|..            ..
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G-~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRG-AKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            346899999999999999999999999 9999999864332221111111 235778899998862            23


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHH----HHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNML----GLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~----~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||+||......    ..++....+++|+.+...+.    ..+++.+. ++|++||...+..              
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~--------------  150 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS--------------  150 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC--------------
Confidence            6999999999654322    22345566788877766544    44455554 8999999887632              


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        ......|..+|.+.+.+.+.+..+     .++++++++|+.+.+|...        . .........       ....
T Consensus       151 --~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~--------~-~~~~~~~~~-------~~~~  212 (334)
T PRK07109        151 --IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD--------W-ARSRLPVEP-------QPVP  212 (334)
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh--------h-hhhhccccc-------cCCC
Confidence              222357999999999988877654     2589999999988765311        0 011111100       1112


Q ss_pred             eeeeHHHHHHHHHHHHhcCCCccEEecC
Q 022414          243 SFCYVSDMVDGLIRLMEGENTGPINIGN  270 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~~~~~~i~~  270 (297)
                      .+..++|+|++++.+++++ ...+++..
T Consensus       213 ~~~~pe~vA~~i~~~~~~~-~~~~~vg~  239 (334)
T PRK07109        213 PIYQPEVVADAILYAAEHP-RRELWVGG  239 (334)
T ss_pred             CCCCHHHHHHHHHHHHhCC-CcEEEeCc
Confidence            4678999999999999987 34555543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.77  E-value=8.2e-17  Score=131.30  Aligned_cols=204  Identities=15%  Similarity=0.098  Sum_probs=138.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~d   99 (297)
                      +|+++||||+|+||+++++.|.++| ++|++++|+.....+.+    ...++.++.+|+++..            ..++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQG-QPVIVSYRTHYPAIDGL----RQAGAQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHH----HHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            5789999999999999999999999 99999998653322222    1224678899998752            12599


Q ss_pred             EEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC---CeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG---ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      ++||+||......    ..++....+++|+.++..+.+.+.+    .+   .++|++||.....                
T Consensus        77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~----------------  140 (236)
T PRK06483         77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK----------------  140 (236)
T ss_pred             EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc----------------
Confidence            9999998643321    2344667788999988877666643    33   3799998865321                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      +......|+.+|.+.+.+++.++.+.  +++++.+.|+.+..+...  ..    ..........++.         .+..
T Consensus       141 ~~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~--~~----~~~~~~~~~~~~~---------~~~~  205 (236)
T PRK06483        141 GSDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD--DA----AYRQKALAKSLLK---------IEPG  205 (236)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC--CH----HHHHHHhccCccc---------cCCC
Confidence            22233569999999999999998874  589999999987533211  11    1111222222111         2446


Q ss_pred             HHHHHHHHHHHHhcCC-Cc-cEEecCC
Q 022414          247 VSDMVDGLIRLMEGEN-TG-PINIGNP  271 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~-~~-~~~i~~~  271 (297)
                      .+|+|+++.+++.... .| .+.+.+|
T Consensus       206 ~~~va~~~~~l~~~~~~~G~~i~vdgg  232 (236)
T PRK06483        206 EEEIIDLVDYLLTSCYVTGRSLPVDGG  232 (236)
T ss_pred             HHHHHHHHHHHhcCCCcCCcEEEeCcc
Confidence            8999999999997443 44 5555554

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.1e-17  Score=133.41  Aligned_cols=190  Identities=14%  Similarity=0.080  Sum_probs=135.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc---------CCcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---------~~~d~vi  102 (297)
                      +++++||||+|+||++++++|+++| ++|++++|+..... .+...  ..++.++++|+++...         ..+|.++
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G-~~V~~~~r~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i   76 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQG-WQVIACGRNQSVLD-ELHTQ--SANIFTLAFDVTDHPGTKAALSQLPFIPELWI   76 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCC-CEEEEEECCHHHHH-HHHHh--cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence            4789999999999999999999999 99999999643211 11111  2357888999987631         2478999


Q ss_pred             EccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      |+||......    ..++....+++|+.++.++++++...   +.++|++||.....                +......
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~----------------~~~~~~~  140 (240)
T PRK06101         77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL----------------ALPRAEA  140 (240)
T ss_pred             EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc----------------CCCCCch
Confidence            9998543211    22334567899999999999998753   45788888865321                1222356


Q ss_pred             HHHhHHHHHHHHHHHHH---HhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHH
Q 022414          176 YDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~---~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      |+.+|...+.+.+.+..   ..+++++.++|+.++++.....                ..    ..   ...+..+|+|+
T Consensus       141 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~----------------~~----~~---~~~~~~~~~a~  197 (240)
T PRK06101        141 YGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN----------------TF----AM---PMIITVEQASQ  197 (240)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC----------------CC----CC---CcccCHHHHHH
Confidence            99999999999888764   3589999999999988752210                00    00   01468999999


Q ss_pred             HHHHHHhcCCCc
Q 022414          253 GLIRLMEGENTG  264 (297)
Q Consensus       253 ~~~~~~~~~~~~  264 (297)
                      .++..++.+...
T Consensus       198 ~i~~~i~~~~~~  209 (240)
T PRK06101        198 EIRAQLARGKSH  209 (240)
T ss_pred             HHHHHHhcCCCE
Confidence            999999986433

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.77  E-value=5e-17  Score=132.77  Aligned_cols=206  Identities=16%  Similarity=0.127  Sum_probs=139.7

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc------------CCcCE
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------IEVDQ  100 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~------------~~~d~  100 (297)
                      |+|||++|+||+++++.|+++| ++|++++|+.....+.....+.  ...+.++.+|+++...            ..+|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEG-AKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999 8999998864222212211111  1247788999987631            25899


Q ss_pred             EEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEeccee-ecCCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEV-YGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~~  170 (297)
                      |||++|......    ..+.+...++.|+.+...+++++.+    .+. +++++||... ++.                 
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~-----------------  142 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN-----------------  142 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC-----------------
Confidence            999999754221    2244667788999999999988865    344 7999999654 331                 


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      .....|+.+|.+.+.+++.+..+   .++.+++++|+.+.++...    ..............+.         ..+.++
T Consensus       143 ~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~----~~~~~~~~~~~~~~~~---------~~~~~~  209 (239)
T TIGR01830       143 AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD----KLSEKVKKKILSQIPL---------GRFGTP  209 (239)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh----hcChHHHHHHHhcCCc---------CCCcCH
Confidence            12356999999999988877654   4899999999988665321    1111222222222111         125678


Q ss_pred             HHHHHHHHHHHhcCC----CccEEecCC
Q 022414          248 SDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      +|+|++++.++....    +..|++.++
T Consensus       210 ~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       210 EEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            999999998885532    446777653

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.3e-17  Score=137.02  Aligned_cols=197  Identities=13%  Similarity=0.066  Sum_probs=137.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      +...+++++||||+|+||+++++.|+++| ++|++++|+.....+....... ...+.++.+|+++..            
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G-~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRG-ATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34457999999999999999999999999 9999999964322211111111 134678899998863            


Q ss_pred             cCCcCEEEEccCCCCCccc------ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIFY------KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      ..++|++|||||.......      +++....+++|+.+...+++++    ++.+. ++|++||...+..          
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------  184 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE----------  184 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC----------
Confidence            2368999999997643322      1234567889999988877765    35555 8999999765431          


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                           +......|+.+|.+.+.+++.+..+   .+++++.++||.+-.+....               ..  .  ..+  
T Consensus       185 -----~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~---------------~~--~--~~~--  238 (293)
T PRK05866        185 -----ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP---------------TK--A--YDG--  238 (293)
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc---------------cc--c--ccC--
Confidence                 1122356999999999998888765   37999999998776553210               00  0  000  


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                       ...+..+++|+.++.+++++.
T Consensus       239 -~~~~~pe~vA~~~~~~~~~~~  259 (293)
T PRK05866        239 -LPALTADEAAEWMVTAARTRP  259 (293)
T ss_pred             -CCCCCHHHHHHHHHHHHhcCC
Confidence             124688999999999998753

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.4e-17  Score=133.25  Aligned_cols=213  Identities=13%  Similarity=0.069  Sum_probs=142.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      +|+++||||+|+||+++++.|+++| +.|++++|+.....+ ....+.  ...+.++++|+++..            ..+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEG-ANVVITGRTKEKLEE-AKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999 899999986432222 211111  246788999998752            235


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +|++||++|......    ..+++...+++|+.++..+++++.+    .+  .+++++||...+.               
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~---------------  143 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD---------------  143 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc---------------
Confidence            899999998543211    2233567889999999999988843    23  2789999875431               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                       +......|+.+|.+.+.+.+.++.+    .++++..++||.+.++...... ...+...+.+.+..++         ..
T Consensus       144 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~  212 (252)
T PRK07677        144 -AGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKL-WESEEAAKRTIQSVPL---------GR  212 (252)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccc-cCCHHHHHHHhccCCC---------CC
Confidence             1122246999999999999887765    3799999999998754311000 0001222222222111         13


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      +...+|+|+++.+++....   +| .+.+.++.
T Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        213 LGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             CCCHHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence            6688999999999887543   44 45665543

>PRK08017 oxidoreductase; Provisional

Probab=99.77  E-value=2.8e-17  Score=135.74  Aligned_cols=202  Identities=18%  Similarity=0.113  Sum_probs=135.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-------------CCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------------IEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------------~~~   98 (297)
                      +++|+||||+|+||+++++.|.++| ++|++++|+....    +.. ...++..+.+|+.+...             ..+
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g-~~v~~~~r~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRG-YRVLAACRKPDDV----ARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHh----HHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            3689999999999999999999999 8999999864322    111 11356778888877521             347


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHH----HHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNM----LGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |.++|++|......    ..++....++.|+.++..+    ++.+++.+. ++|++||...+.                +
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------~  139 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI----------------S  139 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc----------------C
Confidence            89999998654322    2234556788999887665    566666766 799999865431                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHH---HhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|+.+|...|.+.+.+..   ..++++++++|+.+..+...        .... .....  .....+...+.+++
T Consensus       140 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~--------~~~~-~~~~~--~~~~~~~~~~~~~~  208 (256)
T PRK08017        140 TPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTD--------NVNQ-TQSDK--PVENPGIAARFTLG  208 (256)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhh--------cccc-hhhcc--chhhhHHHhhcCCC
Confidence            22346699999999988776543   35799999999876543211        0000 00011  11112222345799


Q ss_pred             HHHHHHHHHHHHhcCCCccE
Q 022414          247 VSDMVDGLIRLMEGENTGPI  266 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~~~~~  266 (297)
                      ++|+|+++..+++++....+
T Consensus       209 ~~d~a~~~~~~~~~~~~~~~  228 (256)
T PRK08017        209 PEAVVPKLRHALESPKPKLR  228 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCce
Confidence            99999999999998875433

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.77  E-value=8.1e-17  Score=132.74  Aligned_cols=215  Identities=17%  Similarity=0.095  Sum_probs=144.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+++++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..++..+.+|+++..            ..
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREG-AKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            457999999999999999999999999 8999999975432222211111 235788899998752            12


Q ss_pred             CcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||++|......     ..+++.+.+++|+.+...+++++    .+.+. ++|++||...+.              
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~--------------  149 (253)
T PRK06172         84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG--------------  149 (253)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc--------------
Confidence            5799999999653221     23446677889999987776654    34444 799999987653              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+.   ++++..+.||.+-.+....... .............+.         ..
T Consensus       150 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~---------~~  217 (253)
T PRK06172        150 --AAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE-ADPRKAEFAAAMHPV---------GR  217 (253)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc-cChHHHHHHhccCCC---------CC
Confidence              22334679999999999999888764   6999999999886654211000 001111111111111         13


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +...+|+++.+++++....   +| .+.+.+|
T Consensus       218 ~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg  249 (253)
T PRK06172        218 IGKVEEVASAVLYLCSDGASFTTGHALMVDGG  249 (253)
T ss_pred             ccCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            5689999999999998653   44 4566554

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.77  E-value=7.2e-17  Score=132.33  Aligned_cols=210  Identities=14%  Similarity=0.098  Sum_probs=140.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++++++||||+|+||+++++.|+++| +.|++..|+.....+ +.... ..++.++.+|+.+..            ..+
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g-~~v~~~~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQG-AIVGLHGTRVEKLEA-LAAEL-GERVKIFPANLSDRDEVKALGQKAEADLEG   80 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHH-HHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999 888887775322211 11111 235778899998752            235


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||......    ..+++...+++|+.+...+++++.+    .+. ++|++||...+..               
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------  145 (245)
T PRK12936         81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTG---------------  145 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcC---------------
Confidence            899999999754322    2345667789999999888887643    344 8999999754321               


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                       ......|+.+|.+.+.+.+.++.+   .+++++.++|+.+..+....    ..... ....... .       ....+.
T Consensus       146 -~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~----~~~~~-~~~~~~~-~-------~~~~~~  211 (245)
T PRK12936        146 -NPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK----LNDKQ-KEAIMGA-I-------PMKRMG  211 (245)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc----cChHH-HHHHhcC-C-------CCCCCc
Confidence             112245999999998888777654   47999999999876543211    00111 1111111 1       112356


Q ss_pred             eHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          246 YVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +.+|+++++.+++....   .| .+++.+|
T Consensus       212 ~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        212 TGAEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             CHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            79999999998886543   34 6777665

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9.5e-17  Score=133.10  Aligned_cols=216  Identities=16%  Similarity=0.090  Sum_probs=143.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      .++++++||||+|+||+++++.|+++| ++|++++|+.. ..+....... ..++.++.+|+++..            ..
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G-~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHG-ANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999 99999998642 1111111111 235778899998752            23


Q ss_pred             CcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      .+|++||+||.......    .++.+..++.|+.+...+++++.+    .+. ++|++||.....               
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------  146 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM---------------  146 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc---------------
Confidence            58999999997543222    233455688999999888887653    333 899998865311               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCC----hhHHHHHHHHHHcCCCeEEecCCce
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD----GRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                      .+......|+.+|...+.+.+.++.+.   +++++.++|+.+.++......    ..........+..+.++        
T Consensus       147 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------  218 (263)
T PRK08226        147 VADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL--------  218 (263)
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC--------
Confidence            112223569999999999999888654   699999999999876421100    00011122222222211        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                       ..+..++|+|+++.+++....   +| .+.+.+|
T Consensus       219 -~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg  252 (263)
T PRK08226        219 -RRLADPLEVGELAAFLASDESSYLTGTQNVIDGG  252 (263)
T ss_pred             -CCCCCHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence             235688999999999886542   44 4555554

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.76  E-value=1.7e-16  Score=131.50  Aligned_cols=214  Identities=14%  Similarity=0.055  Sum_probs=141.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+++++||||+|+||+++++.|.++| +.|+++.|+...........+.  ..++.++.+|+++..            .
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G-~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEK-AKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 8888887754322222221111  235678899998763            1


Q ss_pred             CCcCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHH----HHHHHcCC--eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNML----GLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~----~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      .++|++||+||........    +++...+++|+.+...++    ..+++.+.  ++|++||...+              
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~--------------  149 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ--------------  149 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc--------------
Confidence            2589999999975543322    335567889987765544    44455543  79999996532              


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        .+......|+.+|.+.+.+.+.++.+   .+++++.++|+.+..+.......  -+..........+.         .
T Consensus       150 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~  216 (261)
T PRK08936        150 --IPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFA--DPKQRADVESMIPM---------G  216 (261)
T ss_pred             --CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccC--CHHHHHHHHhcCCC---------C
Confidence              23334467999999999988887655   37999999999998775321100  01111112211111         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---Ccc-EEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TGP-INIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~~-~~i~~~  271 (297)
                      .+...+|+|+++.+++..+.   +|. +.+.++
T Consensus       217 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g  249 (261)
T PRK08936        217 YIGKPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_pred             CCcCHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence            36678999999999987654   554 455544

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.76  E-value=4.6e-17  Score=133.37  Aligned_cols=191  Identities=13%  Similarity=0.108  Sum_probs=135.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc---------CCcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL---------IEVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~---------~~~d~  100 (297)
                      ||+++||||+|+||.++++.|+++| ++|++++|+.....+......  ...++.++++|+++...         .++|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAG-ARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            4789999999999999999999999 999999997543322222111  12468889999998632         24799


Q ss_pred             EEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      +||++|......    ..+++...++.|+.++..+++++.+    .+. +++++||.....                +..
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~  143 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR----------------GRA  143 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC----------------CCC
Confidence            999998654322    2233456788999999988887754    344 799999875321                111


Q ss_pred             CCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHH
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  248 (297)
                      ....|+.+|...+.+.+.+..+   .++++..++|+.++++...                +...    .   ......++
T Consensus       144 ~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~----------------~~~~----~---~~~~~~~~  200 (243)
T PRK07102        144 SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA----------------GLKL----P---GPLTAQPE  200 (243)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh----------------ccCC----C---ccccCCHH
Confidence            2246999999999998887653   4799999999999876310                0000    0   01256799


Q ss_pred             HHHHHHHHHHhcCC
Q 022414          249 DMVDGLIRLMEGEN  262 (297)
Q Consensus       249 Dva~~~~~~~~~~~  262 (297)
                      |+|+.++.+++++.
T Consensus       201 ~~a~~i~~~~~~~~  214 (243)
T PRK07102        201 EVAKDIFRAIEKGK  214 (243)
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999999753

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.76  E-value=7e-17  Score=132.73  Aligned_cols=195  Identities=15%  Similarity=0.127  Sum_probs=137.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc------------cC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      +++++||||+|+||+++++.|+++| ++|++++|+.....+.....   .....+.++++|+++..            ..
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKG-RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5889999999999999999999999 89999998653322211111   11336788999999863            23


Q ss_pred             CcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||+||.......    .+.....+++|+.+...+++++.    +.+. ++|++||......              
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  146 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG--------------  146 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC--------------
Confidence            69999999997654322    23345678899999988888764    4455 8999999764321              


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       ...+...|+.+|.+.+.+.+.+..+   .++++..++|+++.++...                +.     ..   ....
T Consensus       147 -~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~----------------~~-----~~---~~~~  201 (248)
T PRK08251        147 -LPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA----------------KA-----KS---TPFM  201 (248)
T ss_pred             -CCCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh----------------cc-----cc---CCcc
Confidence             0112356999999999998887765   3689999999988765310                00     00   0125


Q ss_pred             eeHHHHHHHHHHHHhcCCCccE
Q 022414          245 CYVSDMVDGLIRLMEGENTGPI  266 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~~~~~  266 (297)
                      +..+|+|++++.+++++....|
T Consensus       202 ~~~~~~a~~i~~~~~~~~~~~~  223 (248)
T PRK08251        202 VDTETGVKALVKAIEKEPGRAA  223 (248)
T ss_pred             CCHHHHHHHHHHHHhcCCCeEE
Confidence            6789999999999987654443

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5.5e-17  Score=132.57  Aligned_cols=193  Identities=16%  Similarity=0.122  Sum_probs=134.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCcc--------------
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPL--------------   94 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~--------------   94 (297)
                      .+++++||||+|+||+++++.|+++| ++|++++|+.....+....+.  ....+..+.+|+++..              
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAG-ATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcC-CEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            46899999999999999999999999 899999997643222211111  1124566778876421              


Q ss_pred             c-CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCC
Q 022414           95 L-IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        95 ~-~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      . ..+|++||+||......     ..++....+++|+.++..+++++.+    .+. +++++||....            
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~------------  151 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE------------  151 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc------------
Confidence            1 35899999999643211     2234556789999998888777744    343 89999886532            


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh----CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                          .+......|+.+|.+.+.+++.++.+.    +++++.++||.++++.....            ..+         .
T Consensus       152 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~------------~~~---------~  206 (239)
T PRK08703        152 ----TPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS------------HPG---------E  206 (239)
T ss_pred             ----cCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc------------CCC---------C
Confidence                122334569999999999998888764    58999999999998752100            000         1


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      ....+...+|++..+.+++...
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~  228 (239)
T PRK08703        207 AKSERKSYGDVLPAFVWWASAE  228 (239)
T ss_pred             CccccCCHHHHHHHHHHHhCcc
Confidence            1123468899999999999853

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.76  E-value=4.8e-17  Score=138.50  Aligned_cols=201  Identities=13%  Similarity=0.095  Sum_probs=139.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+++++||||+|+||+++++.|.++| ++|++++|+.....+....... ...+.++.+|+++..            ..
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G-~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRG-ARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            356899999999999999999999999 9999999965332222111111 235677889998752            13


Q ss_pred             CcCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||........    ++....+++|+.++..+.+++    ++.+. ++|++||...+.               
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~---------------  148 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA---------------  148 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC---------------
Confidence            689999999975543322    334567899999988877776    44444 799998876542               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                       +......|..+|.+.+.+.+.+..+    .++.++.+.|+.+.+|......     .     ..+...      .....
T Consensus       149 -~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~-----~-----~~~~~~------~~~~~  211 (330)
T PRK06139        149 -AQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA-----N-----YTGRRL------TPPPP  211 (330)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc-----c-----cccccc------cCCCC
Confidence             2222357999999998888877765    2689999999999887532110     0     001000      01123


Q ss_pred             eeeHHHHHHHHHHHHhcCCC
Q 022414          244 FCYVSDMVDGLIRLMEGENT  263 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~~  263 (297)
                      +.+++|+|++++.+++++..
T Consensus       212 ~~~pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        212 VYDPRRVAKAVVRLADRPRA  231 (330)
T ss_pred             CCCHHHHHHHHHHHHhCCCC
Confidence            67899999999999988753

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.5e-17  Score=135.44  Aligned_cols=197  Identities=17%  Similarity=0.040  Sum_probs=135.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-------------cCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------------LIEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-------------~~~~   98 (297)
                      ||+++||||+|+||+++++.|+++| ++|++++|+.....+ +........+.++++|+++..             ..++
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEG-WRVGAYDINEAGLAA-LAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRL   78 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHHH-HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999 999999986432221 212222346889999998752             2357


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |+||||||......    ..++.+..+.+|+.++..+++++.    +.+. ++|++||......                
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------------  142 (260)
T PRK08267         79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG----------------  142 (260)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC----------------
Confidence            99999999765322    224466788999999999988874    3443 8999988754311                


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|+.+|...+.+.+.+..+   .+++++.++|+.+..+..... .   ..........           ....+.
T Consensus       143 ~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~-~---~~~~~~~~~~-----------~~~~~~  207 (260)
T PRK08267        143 QPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGT-S---NEVDAGSTKR-----------LGVRLT  207 (260)
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccc-c---chhhhhhHhh-----------ccCCCC
Confidence            112356999999999999888754   479999999998866532110 0   0000000000           011356


Q ss_pred             HHHHHHHHHHHHhcC
Q 022414          247 VSDMVDGLIRLMEGE  261 (297)
Q Consensus       247 v~Dva~~~~~~~~~~  261 (297)
                      .+|+|++++.+++.+
T Consensus       208 ~~~va~~~~~~~~~~  222 (260)
T PRK08267        208 PEDVAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHHHHHHhCC
Confidence            799999999999765

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.76  E-value=2.1e-16  Score=117.37  Aligned_cols=200  Identities=14%  Similarity=0.148  Sum_probs=138.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~a~~  107 (297)
                      |||.|+||||.+|++|+++++++| ++|+++.|++.+..+       .+.+...+.|+.+..     +.+.|+||..-+.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RG-HeVTAivRn~~K~~~-------~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~   72 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRG-HEVTAIVRNASKLAA-------RQGVTILQKDIFDLTSLASDLAGHDAVISAFGA   72 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCC-CeeEEEEeChHhccc-------cccceeecccccChhhhHhhhcCCceEEEeccC
Confidence            899999999999999999999999 999999997644332       146778888888764     4689999997764


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      ...     +..   .........+++..+..++ |++.++..+...-.+...+ .+     .|..|...|..++..+|. 
T Consensus        73 ~~~-----~~~---~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rL-vD-----~p~fP~ey~~~A~~~ae~-  137 (211)
T COG2910          73 GAS-----DND---ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRL-VD-----TPDFPAEYKPEALAQAEF-  137 (211)
T ss_pred             CCC-----Chh---HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCcee-ec-----CCCCchhHHHHHHHHHHH-
Confidence            421     111   2234457788899999898 8888877654322222111 12     466666777888888774 


Q ss_pred             HHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCC-CeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--C
Q 022414          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (297)
Q Consensus       187 ~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~  263 (297)
                      +..+..+..++|+.+-|+..|-|+.....          ..-++ .+..-..|   -+.|+.+|.|-+++..++++.  +
T Consensus       138 L~~Lr~~~~l~WTfvSPaa~f~PGerTg~----------yrlggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~h~r  204 (211)
T COG2910         138 LDSLRAEKSLDWTFVSPAAFFEPGERTGN----------YRLGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQHIR  204 (211)
T ss_pred             HHHHhhccCcceEEeCcHHhcCCccccCc----------eEeccceEEEcCCC---ceeeeHHHHHHHHHHHHhcccccc
Confidence            44555555699999999999998643321          12222 22221222   368999999999999999988  4


Q ss_pred             ccEEe
Q 022414          264 GPINI  268 (297)
Q Consensus       264 ~~~~i  268 (297)
                      +.|.+
T Consensus       205 qRftv  209 (211)
T COG2910         205 QRFTV  209 (211)
T ss_pred             eeeee
Confidence            44443

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.3e-16  Score=133.01  Aligned_cols=204  Identities=14%  Similarity=0.068  Sum_probs=138.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc---hh---hhc--CCCceEEEecccCCcc-------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LR---KWI--GHPRFELIRHDVTEPL-------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~---~~---~~~--~~~~~~~~~~Dl~~~~-------   94 (297)
                      ..+++++||||+|+||+++++.|+++| ++|++++|+.....+.   +.   ..+  ...++.++++|+++..       
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDG-ANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            457899999999999999999999999 9999999875432111   11   111  1235778899998762       


Q ss_pred             -----cCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cC-CeEEEEecceeecCCCCCCCC
Q 022414           95 -----LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        95 -----~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~v~~Ss~~~~~~~~~~~~~  160 (297)
                           ..++|++||+||.......    .++.+..+++|+.++..+++++.+    .+ .+++++||......       
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-------  155 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP-------  155 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc-------
Confidence                 1268999999997543332    233566788999999999999854    22 37888887542110       


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeecc-ccCCCCCCCChhHHHHHHHHHHcCCCeEEec
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFN-TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (297)
                             ....+...|+.+|.+.|.+++.++.+.   +++++.+.|+. +-.+.            ......+.      
T Consensus       156 -------~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~------------~~~~~~~~------  210 (273)
T PRK08278        156 -------KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA------------VRNLLGGD------  210 (273)
T ss_pred             -------cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH------------HHhccccc------
Confidence                   111344679999999999999888764   78999999973 32211            11111111      


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC---CccEEe
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN---TGPINI  268 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i  268 (297)
                        .....+..++|+|++++.++....   +|.+.+
T Consensus       211 --~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~  243 (273)
T PRK08278        211 --EAMRRSRTPEIMADAAYEILSRPAREFTGNFLI  243 (273)
T ss_pred             --ccccccCCHHHHHHHHHHHhcCccccceeEEEe
Confidence              111236788999999999998654   555443

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.76  E-value=4.3e-17  Score=135.17  Aligned_cols=214  Identities=15%  Similarity=0.148  Sum_probs=141.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      .++++++||||+|+||+++++.|+++| ++|++++|+.....+....... ..++.++.+|+++..            ..
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAG-ANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 9999999864322211111111 135678899998752            23


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      ++|++||+||......    ..+++...+++|+.++.++++++.+    .+-+++++||...+.                
T Consensus        86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~----------------  149 (264)
T PRK07576         86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV----------------  149 (264)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc----------------
Confidence            5899999998543221    2334556788999999999888754    334899999976431                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHH-HHHHHHHcCCCeEEecCCceeEee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVS-NFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      +......|..+|.+.+.+++.+..+   .+++++.++|+.+.+....   ....+ .......... .+       ...+
T Consensus       150 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~---~~~~~~~~~~~~~~~~-~~-------~~~~  218 (264)
T PRK07576        150 PMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM---ARLAPSPELQAAVAQS-VP-------LKRN  218 (264)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH---hhcccCHHHHHHHHhc-CC-------CCCC
Confidence            2223467999999999999988765   3689999999887643210   00000 0011111111 11       1235


Q ss_pred             eeHHHHHHHHHHHHhcCC---Ccc-EEecCC
Q 022414          245 CYVSDMVDGLIRLMEGEN---TGP-INIGNP  271 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~---~~~-~~i~~~  271 (297)
                      +..+|+|+++++++..+.   .|. +.+.++
T Consensus       219 ~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg  249 (264)
T PRK07576        219 GTKQDIANAALFLASDMASYITGVVLPVDGG  249 (264)
T ss_pred             CCHHHHHHHHHHHcChhhcCccCCEEEECCC
Confidence            688999999999998643   444 455554

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=1.8e-16  Score=130.92  Aligned_cols=209  Identities=18%  Similarity=0.145  Sum_probs=141.0

Q ss_pred             cCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCC--------ccc--hhhhcC--CCceEEEecccCCcc-
Q 022414           30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGS--------KDN--LRKWIG--HPRFELIRHDVTEPL-   94 (297)
Q Consensus        30 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~--------~~~--~~~~~~--~~~~~~~~~Dl~~~~-   94 (297)
                      .++++|+||||+|  .||.++++.|.++| ++|++++|+..+.        .+.  +...+.  ...+.++.+|+++.. 
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKG-IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcC-CcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            3568999999995  79999999999999 8999999862211        110  111111  235888999998752 


Q ss_pred             -----------cCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHHc----CC-eEEEEecceeecCC
Q 022414           95 -----------LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDP  154 (297)
Q Consensus        95 -----------~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~v~~Ss~~~~~~~  154 (297)
                                 ...+|+|||+||.......    .++++..+++|+.++..+++++.+.    +. ++|++||...+.  
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~--  159 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG--  159 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC--
Confidence                       1358999999987543222    2345667899999999999888543    33 799999976543  


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCC
Q 022414          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP  231 (297)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  231 (297)
                                    +......|+.+|.+.+.+++.++.+   .+++++.++|+.+..+....       ..........+
T Consensus       160 --------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-------~~~~~~~~~~~  218 (256)
T PRK12748        160 --------------PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-------ELKHHLVPKFP  218 (256)
T ss_pred             --------------CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-------hHHHhhhccCC
Confidence                          2223457999999999998887765   47999999998876653211       11111111111


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                               ...+...+|+|+++..++....   .| .+++.++
T Consensus       219 ---------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        219 ---------QGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             ---------CCCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence                     0124567999999998887543   34 5566554

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.5e-16  Score=132.05  Aligned_cols=219  Identities=14%  Similarity=0.072  Sum_probs=141.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCcc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~-----------   94 (297)
                      ...+++++||||+|+||+++++.|+++| ++|++++|+.....+......   ...++..+.+|+++..           
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAG-ASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            3457999999999999999999999999 999999996543222211111   1235778899998862           


Q ss_pred             -cCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       ..++|++||+||.......    .+++...+++|+.+...+.+++    ++.+. ++|++||...+.            
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------  151 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ------------  151 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC------------
Confidence             2358999999997543222    2235566778877766666554    44444 899999976542            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCCh------hHHHHHHHHHHcCCCeEEe
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG------RVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~  235 (297)
                          +......|..+|.+.+.+.+.++.+   .+++++.++||.+..+.......      ................+  
T Consensus       152 ----~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  225 (265)
T PRK07062        152 ----PEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP--  225 (265)
T ss_pred             ----CCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC--
Confidence                1222356999999999988877765   47999999999887654210000      00011111111111111  


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                           ...+...+|+|+++++++....   .| .+.+.+|
T Consensus       226 -----~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        226 -----LGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             -----cCCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence                 1236788999999999887543   44 5566554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.75  E-value=1.1e-16  Score=132.98  Aligned_cols=211  Identities=19%  Similarity=0.176  Sum_probs=141.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ...+++++||||+|+||+++++.|+++| ++|++++|+.....        ..++.++++|+++..            ..
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G-~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANG-ANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999 99999988643321        136778899998862            13


Q ss_pred             CcCEEEEccCCCCCc-------------ccccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCC
Q 022414           97 EVDQIYHLACPASPI-------------FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~  158 (297)
                      .+|++||+||.....             ...+++...+++|+.++..+++++.+    .+. ++|++||...+.      
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------  150 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE------  150 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC------
Confidence            589999999964321             12234556789999999999888864    333 799999976542      


Q ss_pred             CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccC-CCCCCCChhH--------HHHHHHHH
Q 022414          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYG-PRMNIDDGRV--------VSNFIAQA  226 (297)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G-~~~~~~~~~~--------~~~~~~~~  226 (297)
                                +......|+.+|.+.+.+++.++.+   .+++++.++||.+.. +.........        ...+...+
T Consensus       151 ----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (266)
T PRK06171        151 ----------GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGY  220 (266)
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhh
Confidence                      1222367999999999999888765   479999999998742 2111000000        01111111


Q ss_pred             HcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ......+       ...+...+|+|+++.+++....   .| .+++.+|
T Consensus       221 ~~~~~~p-------~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        221 TKTSTIP-------LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             ccccccc-------CCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence            1100111       1246788999999999987644   33 4555544

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.9e-16  Score=130.69  Aligned_cols=211  Identities=16%  Similarity=0.082  Sum_probs=136.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      +.+++|+||||+|+||.++++.|+++| ++|++++|+.....+ ....+   ...++++|+++...            .+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G-~~v~~~~r~~~~~~~-~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEG-ATVVVGDIDPEAGKA-AADEV---GGLFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHH-HHHHc---CCcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 999999986432111 11111   23578889987521            35


Q ss_pred             cCEEEEccCCCCCcc------cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecce-eecCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSE-VYGDPLVHPQDESYWG  165 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~-~~~~~~~~~~~e~~~~  165 (297)
                      +|++||+||......      ..+.....+++|+.++..+++.+.    +.+. ++|++||.. .++.            
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~------------  147 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS------------  147 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC------------
Confidence            899999998754211      122356678899998877766653    3444 788888854 3331            


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                          ......|+.+|.+.+.+.+.+..+   .+++++.++||.+.++..............+. ...  .+   .    .
T Consensus       148 ----~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~--~~---~----~  213 (255)
T PRK06057        148 ----ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARR-LVH--VP---M----G  213 (255)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHH-Hhc--CC---C----C
Confidence                112346999999888887766543   37999999999998875321100000111111 110  11   1    1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      .+..++|+|+++..++....   .| .+.+.++
T Consensus       214 ~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        214 RFAEPEEIAAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             CCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            46889999999998887543   33 4555544

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.75  E-value=1.5e-16  Score=130.20  Aligned_cols=209  Identities=15%  Similarity=0.095  Sum_probs=138.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccch-hhh-cCCCceEEEecccCCcc------------cCCc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL-RKW-IGHPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~-~~~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      |+++||||+|+||+++++.|+++| ++|+++.|......+.. ... ....++.++.+|+++..            ...+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDG-YRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999 89988888322111111 111 11236888999998752            2358


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |+|||++|......    ..+++...++.|+.++..+++.+    ++.+. +++++||.....                +
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~----------------~  143 (242)
T TIGR01829        80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK----------------G  143 (242)
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC----------------C
Confidence            99999998654322    23345667788999877755444    55565 899999865431                1


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|..+|...+.+++.+.++   .+++++.++|+.+.++....    ........+....+.         ..+..
T Consensus       144 ~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~----~~~~~~~~~~~~~~~---------~~~~~  210 (242)
T TIGR01829       144 QFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA----MREDVLNSIVAQIPV---------GRLGR  210 (242)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc----cchHHHHHHHhcCCC---------CCCcC
Confidence            122356999999999888887654   47999999999998775322    112223222222211         12456


Q ss_pred             HHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          247 VSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      .+|+++++.+++..+.    +..+.+.++
T Consensus       211 ~~~~a~~~~~l~~~~~~~~~G~~~~~~gg  239 (242)
T TIGR01829       211 PEEIAAAVAFLASEEAGYITGATLSINGG  239 (242)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            7999999988876643    335666654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2e-16  Score=131.08  Aligned_cols=212  Identities=17%  Similarity=0.145  Sum_probs=143.4

Q ss_pred             cCCCEEEEEcCCc-hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc-----------
Q 022414           30 QSNMRILVTGGAG-FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        30 ~~~~~ilItGatG-~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~-----------   94 (297)
                      ..+++++||||+| .||+++++.|+++| ++|++++|+.....+.....   ....++.++++|+++..           
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEG-ARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3479999999997 69999999999999 88999888643322222111   12235788899998752           


Q ss_pred             -cCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                       ..++|++|||+|.......    .++....+++|+.+...+++++.+    .+  .+++++||...+            
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~------------  161 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW------------  161 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc------------
Confidence             1358999999996543222    234556778999998888777643    33  378888886543            


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                          .+......|+.+|.+.+.+.+.++.+   .+++++.++|+.+..+......   .......+....++        
T Consensus       162 ----~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~--------  226 (262)
T PRK07831        162 ----RAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT---SAELLDELAAREAF--------  226 (262)
T ss_pred             ----CCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc---CHHHHHHHHhcCCC--------
Confidence                12233456999999999999998866   4799999999999887532110   11222222222211        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGN  270 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~  270 (297)
                       ..+...+|+|+++++++....   .| .+.+.+
T Consensus       227 -~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        227 -GRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             -CCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence             235678999999999988653   34 445544

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.75  E-value=9.9e-17  Score=132.74  Aligned_cols=214  Identities=14%  Similarity=0.077  Sum_probs=136.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC---CCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~------------   94 (297)
                      .++|+++||||+++||+++++.|++.| ++|+++.|+.....+.....+.   ...+.++++|+++..            
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSG-VNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            457999999999999999999999999 8998887643222222211111   235788999999862            


Q ss_pred             cCCcCEEEEccCCCCC------cc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCC
Q 022414           95 LIEVDQIYHLACPASP------IF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQ  159 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~------~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~  159 (297)
                      ..++|++|||||....      ..    ..++....+++|+.+...+.+.+    ++.+. ++|++||...+.       
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------  157 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV-------  157 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc-------
Confidence            2358999999985421      11    12234456677777666555444    44444 899999965321       


Q ss_pred             CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEec
Q 022414          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (297)
                               +......|+.+|.+.+.+++.++.+.   +++++.+.||.+-.+.......  ............++    
T Consensus       158 ---------~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~--~~~~~~~~~~~~~~----  222 (260)
T PRK08416        158 ---------YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN--YEEVKAKTEELSPL----  222 (260)
T ss_pred             ---------CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC--CHHHHHHHHhcCCC----
Confidence                     12223569999999999999988764   7999999998876543110000  01111111211111    


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                           ..+..++|+|+++++++....   .| .+.+.++
T Consensus       223 -----~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg  256 (260)
T PRK08416        223 -----NRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG  256 (260)
T ss_pred             -----CCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence                 236789999999999987653   44 4455443

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.75  E-value=9.4e-17  Score=133.12  Aligned_cols=214  Identities=18%  Similarity=0.098  Sum_probs=142.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++++++||||+|+||+++++.|+++| ++|++++|+..... .+.... ..++.++++|+++..            ..+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEG-ARVAVLERSAEKLA-SLRQRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            457999999999999999999999999 99999998643221 121112 235778899998752            236


Q ss_pred             cCEEEEccCCCCCcc-----cccC----hhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-----YKYN----PVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-----~~~~----~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      +|++||+||......     ..++    +...+++|+.+...+++++.+    .+.++|++||...+.            
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------  148 (263)
T PRK06200         81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFY------------  148 (263)
T ss_pred             CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcC------------
Confidence            999999999753211     1111    445678899998888877753    334799999977652            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCC----h-h--HHHHHHHHHHcCCCeEEe
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDD----G-R--VVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~----~-~--~~~~~~~~~~~~~~~~~~  235 (297)
                          +......|+.+|.+.+.+.+.++.+.  +++++.+.||.+..+......    . .  ..+..........+    
T Consensus       149 ----~~~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----  220 (263)
T PRK06200        149 ----PGGGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITP----  220 (263)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCC----
Confidence                22223569999999999999888763  489999999999766421100    0 0  00111111111111    


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcC-C---Cc-cEEecCC
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGE-N---TG-PINIGNP  271 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~-~---~~-~~~i~~~  271 (297)
                           ...+...+|+|+++++++... .   .| .+.+.+|
T Consensus       221 -----~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        221 -----LQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             -----CCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence                 124678899999999999865 3   33 4556554

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=1.1e-16  Score=130.75  Aligned_cols=199  Identities=13%  Similarity=0.050  Sum_probs=134.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++++|+||||+|+||.++++.|.+.| ++|++++|+.....+.........++.++++|+++..            ..+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEG-AQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999 8999999964322211111112235788999998752            124


Q ss_pred             cCEEEEccCCCCCcc--cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  172 (297)
                      +|.++|+++......  ..++....++.|+.+...+++.+.+.   +.++|++||.....               .+..+
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~---------------~~~~~  146 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIY---------------KASPD  146 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcc---------------cCCCC
Confidence            799999998543211  11334556788888877777776553   34788888865421               12223


Q ss_pred             CChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHH
Q 022414          173 RSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  249 (297)
                      ...|..+|.+.+.+++.+..+   .+++++++||++++++...   .    ..... ..    .   .+   ..++..+|
T Consensus       147 ~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~---~----~~~~~-~~----~---~~---~~~~~~~~  208 (238)
T PRK05786        147 QLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEP---E----RNWKK-LR----K---LG---DDMAPPED  208 (238)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCc---h----hhhhh-hc----c---cc---CCCCCHHH
Confidence            456999999999988887765   3899999999999987421   0    00000 00    0   00   13567899


Q ss_pred             HHHHHHHHHhcCC
Q 022414          250 MVDGLIRLMEGEN  262 (297)
Q Consensus       250 va~~~~~~~~~~~  262 (297)
                      +++++++++..+.
T Consensus       209 va~~~~~~~~~~~  221 (238)
T PRK05786        209 FAKVIIWLLTDEA  221 (238)
T ss_pred             HHHHHHHHhcccc
Confidence            9999999997643

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.75  E-value=1.5e-16  Score=131.58  Aligned_cols=213  Identities=13%  Similarity=0.086  Sum_probs=135.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCcCE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEVDQ  100 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~d~  100 (297)
                      |+++||||+|.||+++++.|.++| ++|++++|+.....+....+....++.++++|+++..            ..++|+
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKG-ARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999999999999 8999999864332222222212235778899998752            236999


Q ss_pred             EEEccCCCCCc--c----cccChhhhHHHhHHHHHHHHHH----HH-HcC-CeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPASPI--F----YKYNPVKTIKTNVIGTLNMLGL----AK-RVG-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus       101 vi~~a~~~~~~--~----~~~~~~~~~~~n~~~~~~l~~~----~~-~~~-~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +||+||.....  .    ..++....+.+|+.+...+...    +. +.+ .++|++||.....                
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~----------------  143 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE----------------  143 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC----------------
Confidence            99999964311  1    1122334456676665444333    22 233 3899999987541                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhH-------HHH-HHHHHHcCCCeEEecC
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRV-------VSN-FIAQAIRGEPLTVQAP  237 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~  237 (297)
                      +..+...|+.+|...+.+.+.++.+.   ++++..+.||.+-.+.........       ... .........  +    
T Consensus       144 ~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p----  217 (259)
T PRK08340        144 PMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT--P----  217 (259)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccC--C----
Confidence            23334679999999999999988764   689999999888765421000000       000 011111111  1    


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                         ...+..++|+|+++++++....   .| ...+.+|
T Consensus       218 ---~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg  252 (259)
T PRK08340        218 ---LKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGA  252 (259)
T ss_pred             ---ccCCCCHHHHHHHHHHHcCcccccccCceEeecCC
Confidence               1246788999999999998653   44 4455554

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.3e-17  Score=137.55  Aligned_cols=177  Identities=16%  Similarity=0.084  Sum_probs=120.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+++|+||||+|+||+++++.|+++| ++|++++|+.....+....+   .....+.++++|+++..            
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKG-AHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            357999999999999999999999999 89999998643322211111   11246788899998762            


Q ss_pred             cCCcCEEEEccCCCCCcc--cccChhhhHHHhHHH----HHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF--YKYNPVKTIKTNVIG----TLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~--~~~~~~~~~~~n~~~----~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ..++|++||+||......  ..++.+..+++|+.+    +..++..+++.+. ++|++||...+.... ....+..+  .
T Consensus        93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~-~~~~~~~~--~  169 (306)
T PRK06197         93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA-IHFDDLQW--E  169 (306)
T ss_pred             CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC-CCccccCc--c
Confidence            235899999999754322  234566778999998    5556666666655 899999986432111 11111111  1


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEE--EeeccccCCC
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRI--ARIFNTYGPR  210 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i--vrp~~v~G~~  210 (297)
                      .+..+...|+.+|.+.+.+.+.++.+.   ++++++  +.||.+..+.
T Consensus       170 ~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        170 RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            234456789999999999998887653   454444  4799887654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.75  E-value=2.1e-16  Score=131.36  Aligned_cols=210  Identities=16%  Similarity=0.083  Sum_probs=137.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC---CCceEEEecccCCcc---------------
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPL---------------   94 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~---------------   94 (297)
                      ..++||||+|+||+++++.|+++| ++|+++.|......+.+...+.   ...+..+.+|++|..               
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G-~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEG-YRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            579999999999999999999999 8998887643222222222121   124567889999863               


Q ss_pred             -cCCcCEEEEccCCCCCccc----cc-----------ChhhhHHHhHHHHHHHHHHHHHcC-----------CeEEEEec
Q 022414           95 -LIEVDQIYHLACPASPIFY----KY-----------NPVKTIKTNVIGTLNMLGLAKRVG-----------ARILLTST  147 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~----~~-----------~~~~~~~~n~~~~~~l~~~~~~~~-----------~r~v~~Ss  147 (297)
                       ..++|++|||||.......    ..           +....+++|+.+...+.+++.+..           .+++.+||
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence             1259999999996543221    11           144678999999988887764321           14677766


Q ss_pred             ceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHH
Q 022414          148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIA  224 (297)
Q Consensus       148 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~  224 (297)
                      ....                .+......|+.+|.+.+.+.+.++.+   .+++++.++||.+..+....      .....
T Consensus       161 ~~~~----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~------~~~~~  218 (267)
T TIGR02685       161 AMTD----------------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP------FEVQE  218 (267)
T ss_pred             hhcc----------------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc------hhHHH
Confidence            5432                13334467999999999999988766   57999999999887653211      11111


Q ss_pred             HHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          225 QAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                      ......++   +     ..+...+|+|+++++++..+.   .| .+.+.++..
T Consensus       219 ~~~~~~~~---~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~  263 (267)
T TIGR02685       219 DYRRKVPL---G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLS  263 (267)
T ss_pred             HHHHhCCC---C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCcee
Confidence            11111111   0     124588999999999998653   44 456655433

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR02415 23BDH acetoin reductases

Probab=99.75  E-value=1.6e-16  Score=131.05  Aligned_cols=213  Identities=18%  Similarity=0.074  Sum_probs=139.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------CCcC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IEVD   99 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~~~d   99 (297)
                      ++++|||++|+||.++++.|++.| .+|+++.|+.....+....+.. ...+.++.+|+++...            ..+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDG-FAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            579999999999999999999999 8999999864322222221111 2357788999987631            2589


Q ss_pred             EEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcC--CeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      ++||++|......    ..++.+..+++|+.++..+++++.    +.+  .++|++||.....                +
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~  143 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE----------------G  143 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC----------------C
Confidence            9999998754322    234455678899998887766654    333  3789998865432                1


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChh-------HHHHHHHHHHcCCCeEEecCCc
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGR-------VVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                      ......|..+|.+.+.+.+.+..+.   ++.+..++|+.+..+........       .............         
T Consensus       144 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  214 (254)
T TIGR02415       144 NPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEI---------  214 (254)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhC---------
Confidence            1223569999999999998877663   69999999998865531100000       0000001111100         


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---CccEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~  271 (297)
                      ....+.+++|+++++.++++.+.   +|.+...++
T Consensus       215 ~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  249 (254)
T TIGR02415       215 ALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDG  249 (254)
T ss_pred             CCCCCCCHHHHHHHHHhhcccccCCccCcEEEecC
Confidence            01236788999999999999865   455544443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5e-16  Score=129.54  Aligned_cols=208  Identities=11%  Similarity=0.028  Sum_probs=138.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~d   99 (297)
                      +|+++||||+|+||+++++.|.++| ++|++++|+...    +.... ..++.++.+|+++..            ..++|
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G-~~V~~~~r~~~~----~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   74 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAG-YEVWATARKAED----VEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLD   74 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCC-CEEEEEeCCHHH----HHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4789999999999999999999999 999999986432    11111 235678889998752            13689


Q ss_pred             EEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH---cC-CeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR---VG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~---~~-~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      ++||+||......    ..++....+++|+.++..+++++..   .+ .++|++||...+.                +..
T Consensus        75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~  138 (274)
T PRK05693         75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVL----------------VTP  138 (274)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccC----------------CCC
Confidence            9999999754322    2244566789999999888888743   23 3788888866432                112


Q ss_pred             CCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC----------hhHHHHHHHHHHcCCCeEEecCC
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD----------GRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                      ....|+.+|.+.+.+.+.+..+   .+++++.++||.+.++......          ..+.+ ....+......   .. 
T Consensus       139 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~-  213 (274)
T PRK05693        139 FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWP-LREHIQARARA---SQ-  213 (274)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHH-HHHHHHHHHHh---cc-
Confidence            2356999999999998877654   5899999999999765321100          00100 00000000000   00 


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCCC-ccEEec
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGENT-GPINIG  269 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~i~  269 (297)
                         ......+|+|+.++.+++++.. ..+.+.
T Consensus       214 ---~~~~~~~~~a~~i~~~~~~~~~~~~~~~g  242 (274)
T PRK05693        214 ---DNPTPAAEFARQLLAAVQQSPRPRLVRLG  242 (274)
T ss_pred             ---CCCCCHHHHHHHHHHHHhCCCCCceEEec
Confidence               1235789999999999987653 345454

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=3.7e-16  Score=128.68  Aligned_cols=212  Identities=16%  Similarity=0.071  Sum_probs=142.7

Q ss_pred             cCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+|+++||||+  +.||+++++.|+++| ++|++.+|+. ...+...+. ....+..+++|+++..            .
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G-~~Vi~~~r~~-~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQG-ATVIYTYQND-RMKKSLQKL-VDEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCC-CEEEEecCch-HHHHHHHhh-ccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            457999999999  799999999999999 9999998862 212222222 2235778999998762            2


Q ss_pred             CCcCEEEEccCCCCCc--------ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      .++|++|||||.....        ...+++...+++|+.+...+++++.+.   +.++|++||....             
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-------------  148 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE-------------  148 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc-------------
Confidence            3599999999975421        122345667889999988888877553   2378899886542             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                         .+......|+.+|.+.+.+.+.++.+   .+++++.+.||.+-.+.......  ............+.         
T Consensus       149 ---~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~---------  214 (252)
T PRK06079        149 ---RAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG--HKDLLKESDSRTVD---------  214 (252)
T ss_pred             ---ccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC--hHHHHHHHHhcCcc---------
Confidence               12223457999999999999988865   47999999999997663211000  01122222221111         


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ..+..++|+|+++.+++....   .| .+.+.++
T Consensus       215 ~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        215 GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             cCCCCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence            236788999999999997643   44 4444443

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.74  E-value=2.9e-16  Score=128.28  Aligned_cols=197  Identities=15%  Similarity=0.046  Sum_probs=135.0

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cCCcCE
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LIEVDQ  100 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~~~d~  100 (297)
                      |+||||+|+||.++++.|.++| ++|++++|......+.....+.  ..++.++++|+++..            ....|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADG-FEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999 8898888754322222222221  235888999998762            225799


Q ss_pred             EEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH-----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK-----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      +||++|......    ..+++...++.|+.++..+++++.     +.+. ++|++||...+.                +.
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------~~  143 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVM----------------GN  143 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhcc----------------CC
Confidence            999998654322    344567788999999998888652     2333 799999876432                11


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      .....|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++....    .. ..........++         ..+...
T Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~-~~~~~~~~~~~~---------~~~~~~  209 (239)
T TIGR01831       144 RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE----VE-HDLDEALKTVPM---------NRMGQP  209 (239)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh----hh-HHHHHHHhcCCC---------CCCCCH
Confidence            22356999999999888877654   47999999999987765321    11 111122221111         135578


Q ss_pred             HHHHHHHHHHHhcCC
Q 022414          248 SDMVDGLIRLMEGEN  262 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~  262 (297)
                      +|+|+++.+++..+.
T Consensus       210 ~~va~~~~~l~~~~~  224 (239)
T TIGR01831       210 AEVASLAGFLMSDGA  224 (239)
T ss_pred             HHHHHHHHHHcCchh
Confidence            999999999998654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.9e-16  Score=131.31  Aligned_cols=200  Identities=12%  Similarity=0.083  Sum_probs=137.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----------cCCc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----------LIEV   98 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----------~~~~   98 (297)
                      .++++++||||+|+||.++++.|+++| ++|++++|+.....+.........++.++.+|+++..           ..++
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAG-ARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI   81 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            357899999999999999999999999 9999999964332222111111236888999998863           2358


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++||+||......    ..++....+++|+.++..+++.+.+    .+. +++++||...+.                +
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------~  145 (263)
T PRK09072         82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI----------------G  145 (263)
T ss_pred             CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc----------------C
Confidence            99999998754322    2233556788999999988888754    333 788888865431                1


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|+.+|.+.+.+++.+..+   .+++++.+.|+.+.++...        ..... .. .  ..      ...+..
T Consensus       146 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~--------~~~~~-~~-~--~~------~~~~~~  207 (263)
T PRK09072        146 YPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS--------EAVQA-LN-R--AL------GNAMDD  207 (263)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh--------hhccc-cc-c--cc------cCCCCC
Confidence            122356999999999988888765   3688999999877654310        00000 00 0  00      013568


Q ss_pred             HHHHHHHHHHHHhcCCCc
Q 022414          247 VSDMVDGLIRLMEGENTG  264 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~~~  264 (297)
                      ++|+|++++.+++++..+
T Consensus       208 ~~~va~~i~~~~~~~~~~  225 (263)
T PRK09072        208 PEDVAAAVLQAIEKERAE  225 (263)
T ss_pred             HHHHHHHHHHHHhCCCCE
Confidence            899999999999987543

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.74  E-value=5.2e-17  Score=150.39  Aligned_cols=218  Identities=17%  Similarity=0.161  Sum_probs=141.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+...........   .....+..+++|+++..            
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~G-a~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEG-AHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            347999999999999999999999999 99999998643322111111   12235678899998762            


Q ss_pred             cCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcC--CeEEEEecceeecCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVG--ARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~--~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      ..++|++|||||.......    .++....+++|+.+...+++.+    ++.+  .++|++||...+.            
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~------------  558 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY------------  558 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC------------
Confidence            1269999999997543222    2234556778888776665444    4444  3799999976431            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeecccc-CCCCCCCCh---hH------HHHHHHHHHcCCC
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTY-GPRMNIDDG---RV------VSNFIAQAIRGEP  231 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~-G~~~~~~~~---~~------~~~~~~~~~~~~~  231 (297)
                          +......|+.+|.+.+.+++.++.+   .+++++.++|+.++ |.+......   ..      ...........  
T Consensus       559 ----~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--  632 (676)
T TIGR02632       559 ----AGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKR--  632 (676)
T ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhc--
Confidence                1222367999999999999988776   36999999999887 332111000   00      00111111111  


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                             .....+++++|+|+++.+++....    +..+++.+|..
T Consensus       633 -------~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       633 -------TLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             -------CCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence                   112346889999999999987543    34677776543

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2e-16  Score=130.87  Aligned_cols=216  Identities=13%  Similarity=0.094  Sum_probs=143.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCe-EEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~-v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+++++||||+|+||+++++.|.++| ++ |++++|+.....+....... ...+.++.+|+++..            .
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G-~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERG-AAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            356899999999999999999999999 76 99999864322211111111 235677889998752            1


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      .++|++||++|......    ..+.....+..|+.+..++++++.+    .+  -++|++||...++..           
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----------  151 (260)
T PRK06198         83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-----------  151 (260)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----------
Confidence            25899999999754322    2233456788999999998877743    32  269999998765321           


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChh---HHHHHHHHHHcCCCeEEecCCc
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                           .....|+.+|...|.+.+.+..+.   +++++.++|+.++++........   ....++.......         
T Consensus       152 -----~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------  217 (260)
T PRK06198        152 -----PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------  217 (260)
T ss_pred             -----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------
Confidence                 123569999999999998887653   58999999999988752110000   0111222111111         


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ....+++++|+|+++.+++....   .| .+.+.++
T Consensus       218 ~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        218 PFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQS  253 (260)
T ss_pred             CccCCcCHHHHHHHHHHHcChhhCCccCceEeECCc
Confidence            12346799999999999886543   33 4565554

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2.1e-16  Score=134.10  Aligned_cols=175  Identities=15%  Similarity=0.090  Sum_probs=125.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+++++||||+|+||.++++.|+++| ++|+++.|+.....+....+   .....+.++.+|+.+..            
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAG-AEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            457999999999999999999999999 99999999754333222222   11236788999998852            


Q ss_pred             cCCcCEEEEccCCCCCc---ccccChhhhHHHhHHHHHHHHHHHH----HcCCeEEEEecceeecCC-CCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPI---FYKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGDP-LVHPQDESYWGN  166 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~v~~Ss~~~~~~~-~~~~~~e~~~~~  166 (297)
                      ..++|++||+||.....   ...+..+..+++|+.+...+.+.+.    +...|+|++||...+... ......++    
T Consensus        91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~----  166 (313)
T PRK05854         91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWE----  166 (313)
T ss_pred             CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccc----
Confidence            23599999999976432   2335677789999999887777664    333489999987653211 11111111    


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCC
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPR  210 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~  210 (297)
                       .+..+...|+.+|.+.+.+.++++.+     .++.++.+.||.+..+.
T Consensus       167 -~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        167 -RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             -ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence             23455678999999999999888753     36999999999987653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.73  E-value=2.7e-15  Score=125.17  Aligned_cols=217  Identities=20%  Similarity=0.193  Sum_probs=153.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~~  107 (297)
                      |+|+||||||++|++++++|+++| ++|++..|+......    ..  .++++...|+.+.     .+.+.|.++++.+.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~-~~v~~~~r~~~~~~~----~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~   73 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARG-HEVRAAVRNPEAAAA----LA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGL   73 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCC-CEEEEEEeCHHHHHh----hc--CCcEEEEeccCCHhHHHHHhccccEEEEEecc
Confidence            689999999999999999999999 999999996533322    11  5889999999886     35689999998764


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      .. .   ..  ...........+..+.+. .++ +++++|.....                  ......|..+|...|..
T Consensus        74 ~~-~---~~--~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~------------------~~~~~~~~~~~~~~e~~  128 (275)
T COG0702          74 LD-G---SD--AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGAD------------------AASPSALARAKAAVEAA  128 (275)
T ss_pred             cc-c---cc--chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCC------------------CCCccHHHHHHHHHHHH
Confidence            32 1   11  122223333444444444 334 67777776532                  12235699999999998


Q ss_pred             HHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--Cc
Q 022414          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG  264 (297)
Q Consensus       187 ~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~  264 (297)
                      +..    .++.++++|+...|....     ...  .......+.+..  ..+....+++..+|++.++...+..+.  .+
T Consensus       129 l~~----sg~~~t~lr~~~~~~~~~-----~~~--~~~~~~~~~~~~--~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~  195 (275)
T COG0702         129 LRS----SGIPYTTLRRAAFYLGAG-----AAF--IEAAEAAGLPVI--PRGIGRLSPIAVDDVAEALAAALDAPATAGR  195 (275)
T ss_pred             HHh----cCCCeEEEecCeeeeccc-----hhH--HHHHHhhCCcee--cCCCCceeeeEHHHHHHHHHHHhcCCcccCc
Confidence            854    689999999766665431     111  222223333332  223347899999999999999999874  77


Q ss_pred             cEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          265 PINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       265 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      .|.+.+++..+..++.+.+.+..|.+..++
T Consensus       196 ~~~l~g~~~~~~~~~~~~l~~~~gr~~~~~  225 (275)
T COG0702         196 TYELAGPEALTLAELASGLDYTIGRPVGLI  225 (275)
T ss_pred             EEEccCCceecHHHHHHHHHHHhCCcceee
Confidence            999999989999999999999999887653

>PRK06484 short chain dehydrogenase; Validated

Probab=99.73  E-value=3.5e-16  Score=142.10  Aligned_cols=213  Identities=16%  Similarity=0.178  Sum_probs=146.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+++++||||+|.||.++++.|.++| ++|++++|+..... .+.... ...+..+.+|+++..            ...
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAG-DRLLIIDRDAEGAK-KLAEAL-GDEHLSVQADITDEAAVESAFAQIQARWGR  343 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHh-CCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999 99999998643221 122212 235667889998862            135


Q ss_pred             cCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        98 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      +|++|||||.....     ...++++..+++|+.++..+.+++...   +-++|++||...+.                +
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  407 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL----------------A  407 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC----------------C
Confidence            89999999975321     123446678899999999998887653   23899999977542                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|+.+|...+.+.+.++.+   .+++++.+.||.+.++........ -......+.+..++         ..+..
T Consensus       408 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~  477 (520)
T PRK06484        408 LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-GRADFDSIRRRIPL---------GRLGD  477 (520)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-cHHHHHHHHhcCCC---------CCCcC
Confidence            233467999999999999988765   379999999999987642110000 00111122221111         13568


Q ss_pred             HHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          247 VSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ++|+|+++++++....   +| .+.+.+|
T Consensus       478 ~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        478 PEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            8999999999997643   44 5566554

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.72  E-value=5.7e-16  Score=127.54  Aligned_cols=201  Identities=13%  Similarity=0.084  Sum_probs=129.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccC---------------
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI---------------   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~---------------   96 (297)
                      +|+++||||+|+||+++++.|+++| ++|++++|......+.+.... ..++.++++|+++....               
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKG-THVISISRTENKELTKLAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcC-CEEEEEeCCchHHHHHHHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            3789999999999999999999999 899999986522212111111 24678889999876211               


Q ss_pred             -CcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHH----HHcC-C-eEEEEecceeecCCCCCCCCCCCC
Q 022414           97 -EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-A-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        97 -~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       +...+||++|...+..     ..++....+++|+.+...+++.+    ++.+ . ++|++||...+             
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------------  145 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK-------------  145 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc-------------
Confidence             1227899998654321     22335566777888766555544    3333 3 79999997653             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCC---ChhHHHHHHHHHHcCCCeEEec
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNID---DGRVVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  236 (297)
                         .+..+...|+.+|.+.+.+++.++.+     .++++..++||.+-.+.....   ..... .....+....     .
T Consensus       146 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~-----~  216 (251)
T PRK06924        146 ---NPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDF-TNLDRFITLK-----E  216 (251)
T ss_pred             ---CCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccc-hHHHHHHHHh-----h
Confidence               23444567999999999999888755     368899999987765431000   00000 0011111100     0


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhc
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                          ...+..++|+|+.++.++..
T Consensus       217 ----~~~~~~~~dva~~~~~l~~~  236 (251)
T PRK06924        217 ----EGKLLSPEYVAKALRNLLET  236 (251)
T ss_pred             ----cCCcCCHHHHHHHHHHHHhc
Confidence                01357899999999999987

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.72  E-value=6.6e-16  Score=128.67  Aligned_cols=203  Identities=14%  Similarity=0.090  Sum_probs=134.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCcc------------cCCc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      |+++||||+|+||.++++.|+++| +.|++++|+.....+......  ....+.++.+|+.+..            ..++
T Consensus         1 k~vlItGas~giG~~la~~la~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQG-AELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999 899999886432222111111  1123455788998752            2358


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----c--CCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V--GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      |++||++|......    ..+++...+++|+.++..+++++..    .  +.++|++||...+.                
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~----------------  143 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV----------------  143 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC----------------
Confidence            99999998654322    2344567889999999999988742    2  23899999875431                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCCh---hHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG---RVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                      +......|+.+|.+.+.+.+.+..+   .++++++++||.+.++.......   .............          ...
T Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----------~~~  213 (272)
T PRK07832        144 ALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR----------FRG  213 (272)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh----------ccc
Confidence            1222356999999988888776643   57999999999998775321000   0000000000000          012


Q ss_pred             eeeeHHHHHHHHHHHHhcCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~  262 (297)
                      ..+..+|+|++++.+++++.
T Consensus       214 ~~~~~~~vA~~~~~~~~~~~  233 (272)
T PRK07832        214 HAVTPEKAAEKILAGVEKNR  233 (272)
T ss_pred             CCCCHHHHHHHHHHHHhcCC
Confidence            35789999999999997643

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=5.6e-16  Score=131.14  Aligned_cols=226  Identities=15%  Similarity=0.057  Sum_probs=147.7

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~-----------   94 (297)
                      ....+++++||||+|+||+++++.|+++| .+|++.++......+.....+.  ..++.++++|+++..           
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~G-a~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLG-ATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999 8999888753322222222111  235778899998751           


Q ss_pred             cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----c----C----CeEEEEecceeecCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V----G----ARILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~----~----~r~v~~Ss~~~~~~~~~~~  158 (297)
                      ..++|++||+||......    ..+++...+++|+.++..+++++..    .    +    .++|++||...+.      
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  160 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV------  160 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc------
Confidence            135899999999765432    2344667889999999999887642    1    1    2789999876542      


Q ss_pred             CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEe
Q 022414          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (297)
                                +......|+.+|.+.+.+.+.++.+   .+++++.+.|+.  ...       +.....    .... ...
T Consensus       161 ----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t~-------~~~~~~----~~~~-~~~  216 (306)
T PRK07792        161 ----------GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RTA-------MTADVF----GDAP-DVE  216 (306)
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CCc-------hhhhhc----cccc-hhh
Confidence                      1122346999999999999887765   578888888862  111       101110    0000 000


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecC------------------CCcccHHHHHHHHHHhh
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGN------------------PGEFTMLELAENVKEVN  287 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~------------------~~~~s~~e~~~~i~~~~  287 (297)
                         ......+.++|+|.++.+++....   .| .+.+.+                  +...+..|+.+.+.+.+
T Consensus       217 ---~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T PRK07792        217 ---AGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF  287 (306)
T ss_pred             ---hhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence               011234579999999998886532   33 333322                  24468888888888874

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=7.3e-16  Score=126.60  Aligned_cols=194  Identities=18%  Similarity=0.124  Sum_probs=131.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCc-------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEP-------------   93 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~-------------   93 (297)
                      ..+++++||||+|+||.++++.|++.| ++|++++|+...... +...+   ....+.++.+|+++.             
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G-~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHG-ATVILLGRTEEKLEA-VYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCC-CcEEEEeCCHHHHHH-HHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            357999999999999999999999999 899999996532211 11111   123456677777532             


Q ss_pred             -ccCCcCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCC
Q 022414           94 -LLIEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        94 -~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                       ....+|+|||+||.....     ...+.+...+++|+.+...+++++.    +.+. +++++||.....          
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~----------  157 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ----------  157 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC----------
Confidence             123589999999865331     1224456778999999888887763    4555 799999875431          


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                            +......|+.+|.+.+.+++.+..+.   +++++.++|+.+-++...    .        .....      +  
T Consensus       158 ------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~----~--------~~~~~------~--  211 (247)
T PRK08945        158 ------GRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA----S--------AFPGE------D--  211 (247)
T ss_pred             ------CCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh----h--------hcCcc------c--
Confidence                  11223469999999999998877654   588888999877554210    0        00000      0  


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                       ...+...+|+++.+++++....
T Consensus       212 -~~~~~~~~~~~~~~~~~~~~~~  233 (247)
T PRK08945        212 -PQKLKTPEDIMPLYLYLMGDDS  233 (247)
T ss_pred             -ccCCCCHHHHHHHHHHHhCccc
Confidence             1135688999999999886543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=1.9e-15  Score=125.71  Aligned_cols=213  Identities=13%  Similarity=0.047  Sum_probs=140.4

Q ss_pred             cCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~------------   94 (297)
                      .+++.++||||++  .||+++++.|++.| ++|++.+|+... .+...+.... .....+++|+++..            
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~G-a~V~~~~r~~~~-~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQG-AELAFTYQGEAL-GKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCC-CEEEEecCchHH-HHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            4578999999997  99999999999999 999998875321 1122222111 12346789999862            


Q ss_pred             cCCcCEEEEccCCCCCc--------ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      ..++|++|||||.....        ...+++...+++|+.+...+++++...   +-++|++||.....           
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~-----------  151 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR-----------  151 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc-----------
Confidence            23699999999965321        123446667889999988888776432   23789998875421           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                           +......|..+|.+.+.+.+.++.+   .+++++.+.||.+-.+.......  ............++        
T Consensus       152 -----~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~--~~~~~~~~~~~~p~--------  216 (271)
T PRK06505        152 -----VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD--ARAIFSYQQRNSPL--------  216 (271)
T ss_pred             -----cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc--hHHHHHHHhhcCCc--------
Confidence                 1222356999999999999988876   37999999999987654211000  00111111111111        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                       ..+...+|+|+++++++....   .| .+.+.+|
T Consensus       217 -~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG  250 (271)
T PRK06505        217 -RRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSG  250 (271)
T ss_pred             -cccCCHHHHHHHHHHHhCccccccCceEEeecCC
Confidence             135678999999999997543   44 4555554

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=1.8e-15  Score=125.05  Aligned_cols=213  Identities=16%  Similarity=0.064  Sum_probs=140.3

Q ss_pred             ccCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcc-----------
Q 022414           29 FQSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL-----------   94 (297)
Q Consensus        29 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~-----------   94 (297)
                      ...+|+++||||+  +.||+++++.|++.| ++|++.+|+... .+.+.+.... .....+++|+++..           
T Consensus         7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G-~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   84 (258)
T PRK07533          7 PLAGKRGLVVGIANEQSIAWGCARAFRALG-AELAVTYLNDKA-RPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE   84 (258)
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcC-CEEEEEeCChhh-HHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH
Confidence            3457999999998  599999999999999 999999886422 1112222111 23457889998762           


Q ss_pred             -cCCcCEEEEccCCCCCc--------ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                       ..++|++|||||.....        ...+++...+++|+.+...+++++...   +.++|++||....           
T Consensus        85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~-----------  153 (258)
T PRK07533         85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE-----------  153 (258)
T ss_pred             HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc-----------
Confidence             23589999999965321        123446678899999999998877442   2378888886532           


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                           .+......|+.+|.+.+.+.+.++.+   .++++..+.||.+-.+..... .. ............++       
T Consensus       154 -----~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~~~p~-------  219 (258)
T PRK07533        154 -----KVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI-DD-FDALLEDAAERAPL-------  219 (258)
T ss_pred             -----cCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc-CC-cHHHHHHHHhcCCc-------
Confidence                 11222356999999999999888765   479999999998866532110 00 01112222221111       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGN  270 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~  270 (297)
                        ..+...+|+|+++++++....   .| .+.+.+
T Consensus       220 --~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdg  252 (258)
T PRK07533        220 --RRLVDIDDVGAVAAFLASDAARRLTGNTLYIDG  252 (258)
T ss_pred             --CCCCCHHHHHHHHHHHhChhhccccCcEEeeCC
Confidence              135688999999999987643   44 444444

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.6e-15  Score=126.42  Aligned_cols=225  Identities=15%  Similarity=0.083  Sum_probs=140.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc-----------cCCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL-----------LIEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~-----------~~~~d   99 (297)
                      +|.++|||+ |+||+++++.|. +| ++|++++|+.....+....+.. ..++.++++|+++..           ..++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G-~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AG-KKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            578999998 699999999996 78 9999999864332222222111 135778899998862           13599


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCC-----CCC---CCCCCCCCCC
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPL-----VHP---QDESYWGNVN  168 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~-----~~~---~~e~~~~~~~  168 (297)
                      ++|||||...   ...++...+++|+.++..+++++.+.   +.++|++||........     ...   .+.+......
T Consensus        79 ~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (275)
T PRK06940         79 GLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLP  155 (275)
T ss_pred             EEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccc
Confidence            9999999753   23567888999999999999888653   22456677665432110     000   0000000000


Q ss_pred             ---C---CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          169 ---P---IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       169 ---~---~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                         +   ......|..+|.+.+.+.+.++.+   .+++++.+.||.+..+................+....++       
T Consensus       156 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-------  228 (275)
T PRK06940        156 FLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA-------  228 (275)
T ss_pred             cccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc-------
Confidence               0   023467999999999998887765   379999999999877642110000000111112211111       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                        ..+...+|+|+++++++....   .| .+.+.+|
T Consensus       229 --~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg  262 (275)
T PRK06940        229 --GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG  262 (275)
T ss_pred             --ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence              236788999999999987543   44 5666554

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=2.9e-15  Score=123.68  Aligned_cols=213  Identities=13%  Similarity=0.040  Sum_probs=139.4

Q ss_pred             cCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhh---hcCCCceEEEecccCCcc----------
Q 022414           30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---WIGHPRFELIRHDVTEPL----------   94 (297)
Q Consensus        30 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~----------   94 (297)
                      ..+|+++||||+  +.||+++++.|.++| ++|++.+|.... .+.+.+   .+...++..+++|+++..          
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G-~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAG-AKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCC-CEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            457999999997  899999999999999 899998875321 222222   222245778899999862          


Q ss_pred             --cCCcCEEEEccCCCCC----cc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASP----IF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                        ..++|++|||||....    ..    ..+.....+++|+.+...+++++.+.   +-++|++||....          
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~----------  152 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE----------  152 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc----------
Confidence              2359999999986531    11    12234456788888888777776542   2379999987542          


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                            .+......|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+..... .. .......+....+       
T Consensus       153 ------~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~~~p-------  217 (257)
T PRK08594        153 ------RVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGV-GG-FNSILKEIEERAP-------  217 (257)
T ss_pred             ------cCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhh-cc-ccHHHHHHhhcCC-------
Confidence                  12222356999999999999988765   379999999998876531000 00 0011111111111       


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                        ...+..++|+|+++++++....   .| .+.+.+|
T Consensus       218 --~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        218 --LRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             --ccccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence              1235788999999999987643   44 4455443

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=1.5e-15  Score=126.36  Aligned_cols=212  Identities=14%  Similarity=0.029  Sum_probs=139.0

Q ss_pred             cCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc-----------
Q 022414           30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        30 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~-----------   94 (297)
                      +.+|+++||||+  +.||+++++.|.+.| ++|++.+|+.. ..+.+.....  ... ..+++|+++..           
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G-~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQG-AELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCC-CEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            457999999997  799999999999999 89999888632 1122222211  112 56889999862           


Q ss_pred             -cCCcCEEEEccCCCCC----c----ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASP----I----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~----~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                       ..++|++|||||....    .    ...+++...+++|+.++..+.+++.+.   +.++|++||....           
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~-----------  148 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGV-----------  148 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCc-----------
Confidence             2358999999996432    1    123445668899999998888877542   2379999986532           


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                           .+......|+.+|.+.+.+.+.++.+   .++++..+.||.+..+..... ..+ ..... ... ...+      
T Consensus       149 -----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~-~~~~~-~~~-~~~p------  213 (274)
T PRK08415        149 -----KYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI-GDF-RMILK-WNE-INAP------  213 (274)
T ss_pred             -----cCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc-chh-hHHhh-hhh-hhCc------
Confidence                 11222356999999999999988865   479999999998876431100 000 00000 000 0011      


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                       ...+..++|+|+++++++....   .| .+.+.+|
T Consensus       214 -l~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG  248 (274)
T PRK08415        214 -LKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG  248 (274)
T ss_pred             -hhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCc
Confidence             1235788999999999998543   44 4555544

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=3.4e-15  Score=123.42  Aligned_cols=213  Identities=15%  Similarity=0.066  Sum_probs=138.7

Q ss_pred             cCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||++  .||+++++.|++.| +.|++.+|+. ...+....+.. ......+.+|+++..            
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G-~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREG-AELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCC-CEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence            3578999999985  89999999999999 8998888752 11222222211 124567889998862            


Q ss_pred             cCCcCEEEEccCCCCCcc---------cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF---------YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                      ..++|++|||||......         ..+++...+++|+.+...+.+++...   +-++|++||....           
T Consensus        82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~-----------  150 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE-----------  150 (262)
T ss_pred             cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC-----------
Confidence            235899999999643211         12334566788998888887776432   2378899886542           


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                           .+......|+.+|.+.+.+.+.++.+   .++++..+.||.+..+..... .. ............++       
T Consensus       151 -----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~-~~~~~~~~~~~~p~-------  216 (262)
T PRK07984        151 -----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KD-FRKMLAHCEAVTPI-------  216 (262)
T ss_pred             -----CCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC-Cc-hHHHHHHHHHcCCC-------
Confidence                 12222356999999999999988875   479999999998865421100 00 01111211111111       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                        ..+..++|+|+++++++....   .| .+.+.++
T Consensus       217 --~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        217 --RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             --cCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence              236788999999999998643   44 4555554

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.4e-15  Score=124.39  Aligned_cols=212  Identities=14%  Similarity=0.088  Sum_probs=140.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc--------cCCcC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL--------LIEVD   99 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~--------~~~~d   99 (297)
                      ..+++++|||++|.||+++++.|++.| .+|++++|+.....+....+..  ...+.++.+|+++..        ..++|
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEG-CHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            457999999999999999999999999 8999999864322221111111  235778899998753        23699


Q ss_pred             EEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      ++|||+|......    ..++....+++|+.+...+++++    ++.+. ++|++||....                .+.
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~----------------~~~  147 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE----------------NPD  147 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc----------------CCC
Confidence            9999999654322    22345667889999888887776    44433 78888886432                122


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH----------HHHHHHHHcCCCeEEecC
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV----------SNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~  237 (297)
                      .....|..+|.+.+.+.+.++.+   .+++++.+.||.+..+...    ...          ......+....  +    
T Consensus       148 ~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~----  217 (259)
T PRK06125        148 ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML----TLLKGRARAELGDESRWQELLAGL--P----  217 (259)
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH----HHHHhhhhcccCCHHHHHHHhccC--C----
Confidence            23356899999999999888754   4799999999887665210    000          00001111110  1    


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                         ...+..++|+|+++++++....   +| .+.+.+|
T Consensus       218 ---~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg  252 (259)
T PRK06125        218 ---LGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGG  252 (259)
T ss_pred             ---cCCCcCHHHHHHHHHHHcCchhccccCceEEecCC
Confidence               1235689999999999987543   44 4555554

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=2.2e-15  Score=124.59  Aligned_cols=212  Identities=14%  Similarity=0.026  Sum_probs=138.6

Q ss_pred             CCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcc------------c
Q 022414           31 SNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL------------L   95 (297)
Q Consensus        31 ~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~------------~   95 (297)
                      .+|.++||||++  .||.++++.|.++| ++|++.+|+. ...+...++... .....+++|+++..            .
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G-~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHG-AELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcC-CEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            468999999997  89999999999999 8998888752 112222222211 12235689999862            2


Q ss_pred             CCcCEEEEccCCCCCc--------ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      .++|++||++|.....        ...+++...+++|+.+...+++++.+.   +-++|++||.....            
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------  152 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK------------  152 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc------------
Confidence            3599999999864321        122346667899999998888876432   23799999865421            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                          +......|+.+|.+.+.+.+.++.+   .++++..+.||.+-.+.......  ............++         
T Consensus       153 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~---------  217 (260)
T PRK06603        153 ----VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD--FSTMLKSHAATAPL---------  217 (260)
T ss_pred             ----CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC--cHHHHHHHHhcCCc---------
Confidence                1222356999999999999888765   47999999999886653110000  01111222211111         


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ..+...+|+|+++++++....   .| .+.+.+|
T Consensus       218 ~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  251 (260)
T PRK06603        218 KRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG  251 (260)
T ss_pred             CCCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence            235788999999999998643   44 4555554

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=2.4e-15  Score=124.43  Aligned_cols=213  Identities=14%  Similarity=0.012  Sum_probs=137.4

Q ss_pred             cCCCEEEEEcC--CchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~------------   94 (297)
                      ..+++++||||  ++.||+++++.|.++| ++|++..|.. ...+.+.+.... .....+++|+++..            
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G-~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQG-AELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCC-CEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence            35789999997  6799999999999999 9998887742 222223222211 23456889999862            


Q ss_pred             cCCcCEEEEccCCCCCc----c-----cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPI----F-----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~----~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                      ..++|++|||||.....    .     ..+++...+++|+.+...+.+++..    .+.++|++||...+.         
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~---------  152 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR---------  152 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc---------
Confidence            23699999999976431    0     1123445567888887777766533    223788998876431         


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                             +......|+.+|.+.+.+.+.++.+   .+++++.+.||.+-.+...... . .......+....++      
T Consensus       153 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~-~-~~~~~~~~~~~~p~------  217 (261)
T PRK08690        153 -------AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIA-D-FGKLLGHVAAHNPL------  217 (261)
T ss_pred             -------CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCC-c-hHHHHHHHhhcCCC------
Confidence                   2223456999999999998887654   4799999999988665311000 0 01111112121111      


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                         ..+..++|+|+++++++....   .| .+.+.+|
T Consensus       218 ---~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG  251 (261)
T PRK08690        218 ---RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGG  251 (261)
T ss_pred             ---CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCC
Confidence               236789999999999998643   44 4555544

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.7e-15  Score=122.33  Aligned_cols=189  Identities=15%  Similarity=0.139  Sum_probs=132.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc---------CCcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---------~~~d~vi~  103 (297)
                      |+++||||+|.||+++++.|.++| ++|++++|+..    .+.......++.++++|+++...         .++|++||
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g-~~v~~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDG-HKVTLVGARRD----DLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCC-CEEEEEeCCHH----HHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            589999999999999999999999 99999988532    22222111246678899987631         25899999


Q ss_pred             ccCCCCC----c--c---cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414          104 LACPASP----I--F---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus       104 ~a~~~~~----~--~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      ++|....    .  .   ..++....+++|+.+...+++++.+.   +.++|++||...                    .
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------------------~  135 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------------------P  135 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------------------C
Confidence            9974211    0  0   13456678899999999999888542   237999988541                    1


Q ss_pred             CCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHH
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  248 (297)
                      ....|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+..            ... ..  .          +...++
T Consensus       136 ~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~------------~~~-~~--~----------p~~~~~  190 (223)
T PRK05884        136 AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY------------DGL-SR--T----------PPPVAA  190 (223)
T ss_pred             CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh------------hhc-cC--C----------CCCCHH
Confidence            1246999999999999888765   469999999988754320            000 00  0          112789


Q ss_pred             HHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          249 DMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       249 Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      |+|+++.+++....   .| .+.+.+|
T Consensus       191 ~ia~~~~~l~s~~~~~v~G~~i~vdgg  217 (223)
T PRK05884        191 EIARLALFLTTPAARHITGQTLHVSHG  217 (223)
T ss_pred             HHHHHHHHHcCchhhccCCcEEEeCCC
Confidence            99999999987643   44 4555544

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.69  E-value=8e-16  Score=127.49  Aligned_cols=215  Identities=16%  Similarity=0.119  Sum_probs=140.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+++++||||+|+||+++++.|+++| ++|++++|+..... .+.... ..++..+++|+++..            ..+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEG-ARVAVLDKSAAGLQ-ELEAAH-GDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHhhc-CCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999 99999998643211 111111 235778899998752            135


Q ss_pred             cCEEEEccCCCCCcc-----cc----cChhhhHHHhHHHHHHHHHHHHHc----CCeEEEEecceeecCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-----YK----YNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-----~~----~~~~~~~~~n~~~~~~l~~~~~~~----~~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      +|++|||||......     ..    +++...+++|+.++..+++++.+.    +.++|++||...+.            
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~------------  147 (262)
T TIGR03325        80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY------------  147 (262)
T ss_pred             CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec------------
Confidence            899999998643111     11    135567899999999998888552    23688888765431            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCCh----hHHHHH-HHHHHcCCCeEEecC
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDG----RVVSNF-IAQAIRGEPLTVQAP  237 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~  237 (297)
                          +......|+.+|.+.+.+.+.++.+.  .++++.+.||.+..+.......    ...... ........ .+    
T Consensus       148 ----~~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p----  218 (262)
T TIGR03325       148 ----PNGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV-LP----  218 (262)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc-CC----
Confidence                12223569999999999999998774  3889999999987664211000    000000 01111110 11    


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----Cc-cEEecCC
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TG-PINIGNP  271 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~-~~~i~~~  271 (297)
                         ...+...+|+|+++++++..+.    .| .+.+.+|
T Consensus       219 ---~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg  254 (262)
T TIGR03325       219 ---IGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG  254 (262)
T ss_pred             ---CCCCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence               1246678999999999887532    33 4555544

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.69  E-value=5e-16  Score=127.26  Aligned_cols=157  Identities=18%  Similarity=0.121  Sum_probs=115.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc----------------
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL----------------   95 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~----------------   95 (297)
                      +|+++||||+|+||+++++.|+++| ++|++++|+....   +.. ....++.++++|+++...                
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G-~~v~~~~r~~~~~---~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPG-IAVLGVARSRHPS---LAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG   75 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCC-CEEEEEecCcchh---hhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence            4799999999999999999999999 9999999864321   111 112357888999987521                


Q ss_pred             CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ..+|++||++|......     ..+.+...+++|+.+...+.+.+.    +.+. ++|++||...+              
T Consensus        76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~--------------  141 (243)
T PRK07023         76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR--------------  141 (243)
T ss_pred             CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc--------------
Confidence            14789999998754321     123356677889998766655553    3444 89999997754              


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH--hCCcEEEEeeccccCC
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ--HGIEIRIARIFNTYGP  209 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~ivrp~~v~G~  209 (297)
                        .+..+...|+.+|...|.+++.+..+  .++++..++|+.+-.+
T Consensus       142 --~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        142 --NAYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence              23344577999999999999988765  4799999999877544

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.69  E-value=4.3e-15  Score=121.10  Aligned_cols=199  Identities=14%  Similarity=0.099  Sum_probs=132.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~vi~  103 (297)
                      |+|+||||+|+||+++++.|++++ ...|.+..|.....       ....++.++++|+++..        ..++|++||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~   73 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLIN   73 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            689999999999999999999985 15566666543211       12346788999998763        246999999


Q ss_pred             ccCCCCCcc----------cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414          104 LACPASPIF----------YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus       104 ~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +||......          ..+.....+.+|+.+...+.+.+.+    .+. +++++||....  .     ..      .
T Consensus        74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~--~-----~~------~  140 (235)
T PRK09009         74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGS--I-----SD------N  140 (235)
T ss_pred             CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccc--c-----cc------C
Confidence            999764211          1122345678888888877777644    333 78888874321  0     00      1


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      +..+...|+.+|...+.+++.++.+     .++++..+.||.+..+....            +....  +       ...
T Consensus       141 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~------------~~~~~--~-------~~~  199 (235)
T PRK09009        141 RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP------------FQQNV--P-------KGK  199 (235)
T ss_pred             CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc------------hhhcc--c-------cCC
Confidence            2233457999999999999988865     36889999999887654210            00111  0       122


Q ss_pred             eeeHHHHHHHHHHHHhcCC---CccEEecCCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TGPINIGNPG  272 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~  272 (297)
                      +...+|+|++++.++..+.   .|.+....++
T Consensus       200 ~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        200 LFTPEYVAQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             CCCHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence            5789999999999998764   5554444333

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=3.9e-15  Score=123.85  Aligned_cols=212  Identities=14%  Similarity=0.025  Sum_probs=139.7

Q ss_pred             CCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcc------------c
Q 022414           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL------------L   95 (297)
Q Consensus        31 ~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~------------~   95 (297)
                      .+|+++||||+  +.||.++++.|.++| ++|++..|+.. ..+.+..+... .....+++|+++..            .
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G-~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAG-AELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCC-CEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            46899999997  899999999999999 89988877421 12222222111 23456889998762            2


Q ss_pred             CCcCEEEEccCCCCCc--------ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      .++|++|||||.....        ...+++...+++|+.++..+++++.+.   +-++|++||....             
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-------------  153 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE-------------  153 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc-------------
Confidence            3599999999975421        123446678899999999998887653   2378889886532             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                         .+......|+.+|.+.+.+.+.++.+   .++++..+.||.+..+...... .+ .. ....... ..++       
T Consensus       154 ---~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~-~~-~~-~~~~~~~-~~p~-------  219 (272)
T PRK08159        154 ---KVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIG-DF-RY-ILKWNEY-NAPL-------  219 (272)
T ss_pred             ---cCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCC-cc-hH-HHHHHHh-CCcc-------
Confidence               12222356999999999999988876   4699999999988654211000 00 00 1111110 1111       


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ..+...+|+|+++++++....   +| .+.+.+|
T Consensus       220 ~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        220 RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             cccCCHHHHHHHHHHHhCccccCccceEEEECCC
Confidence            135788999999999998643   44 4556555

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=6e-15  Score=121.80  Aligned_cols=200  Identities=16%  Similarity=0.062  Sum_probs=133.3

Q ss_pred             cCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCC-------cc---chhhhcC--CCceEEEecccCCcc-
Q 022414           30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGS-------KD---NLRKWIG--HPRFELIRHDVTEPL-   94 (297)
Q Consensus        30 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~-------~~---~~~~~~~--~~~~~~~~~Dl~~~~-   94 (297)
                      .++++++||||+|  .||.++++.|+++| .+|+++.|....+       .+   .....+.  ...+..+++|+++.. 
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G-~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAG-ADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCC-CeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            3579999999995  89999999999999 8888876432111       11   1111111  135778899998752 


Q ss_pred             -----------cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCC
Q 022414           95 -----------LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDP  154 (297)
Q Consensus        95 -----------~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~  154 (297)
                                 ...+|++||+||......    ..++.+..+++|+.+...+.+++    ++.+. ++|++||....   
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~---  159 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ---  159 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC---
Confidence                       224899999998654321    22345567889999887775444    43333 89999997643   


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCC
Q 022414          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP  231 (297)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  231 (297)
                                   .+......|+.+|.+.+.+.+.++.+   .+++++.++|+.+-.+...   .    .....+....+
T Consensus       160 -------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~---~----~~~~~~~~~~~  219 (256)
T PRK12859        160 -------------GPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT---E----EIKQGLLPMFP  219 (256)
T ss_pred             -------------CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC---H----HHHHHHHhcCC
Confidence                         23334567999999999999888765   4799999999988665321   1    11111111111


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                               ...+...+|+|+++.+++....
T Consensus       220 ---------~~~~~~~~d~a~~~~~l~s~~~  241 (256)
T PRK12859        220 ---------FGRIGEPKDAARLIKFLASEEA  241 (256)
T ss_pred             ---------CCCCcCHHHHHHHHHHHhCccc
Confidence                     1124578999999999887643

>PRK05855 short chain dehydrogenase; Validated

Probab=99.69  E-value=1.2e-15  Score=140.59  Aligned_cols=211  Identities=13%  Similarity=0.024  Sum_probs=139.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+++++||||+|+||+++++.|.++| ++|++++|+.....+....... ..++.++.+|+++...            .
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREG-AEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            356899999999999999999999999 8999999964332221111111 1357889999998631            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcC--CeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++|||||......    ..++....+++|+.++.++++++.    +.+  .++|++||...+.              
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------------  457 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA--------------  457 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc--------------
Confidence            5899999999765332    234456678899999988887753    333  3899999988764              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCCh-hHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG-RVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        +......|+.+|.+.+.+.+.+..+   .+++++.++||.+-.+....... ............ .......     .
T Consensus       458 --~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~  529 (582)
T PRK05855        458 --PSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRG-RADKLYQ-----R  529 (582)
T ss_pred             --CCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHh-hhhhhcc-----c
Confidence              2233467999999999998887755   47999999999886643211000 000000000000 0000000     1


Q ss_pred             eeeeHHHHHHHHHHHHhcCCC
Q 022414          243 SFCYVSDMVDGLIRLMEGENT  263 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~~  263 (297)
                      .....+|+|++++.++.++..
T Consensus       530 ~~~~p~~va~~~~~~~~~~~~  550 (582)
T PRK05855        530 RGYGPEKVAKAIVDAVKRNKA  550 (582)
T ss_pred             cCCCHHHHHHHHHHHHHcCCC
Confidence            134679999999999998653

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.68  E-value=2.3e-15  Score=127.84  Aligned_cols=191  Identities=15%  Similarity=0.098  Sum_probs=132.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCc--c--------c--
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEP--L--------L--   95 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~--~--------~--   95 (297)
                      .++.++||||||+||++++++|.++| ++|++++|+.....+...++   .....+..+.+|+.+.  .        .  
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKG-LNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            47899999999999999999999999 89999999754322211111   1123566778888742  0        1  


Q ss_pred             CCcCEEEEccCCCCCc--c----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPI--F----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~--~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      .++|++|||||.....  .    ..++....+++|+.++..+.+++.    +.+. ++|++||...+...          
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------  200 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP----------  200 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------
Confidence            1366999999975321  1    223355678999999988888764    3444 89999997654210          


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                          +.+....|+.+|.+.+.+.+.+..+.   ++++..+.||.+-.+....              ...        .  
T Consensus       201 ----~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~--------------~~~--------~--  252 (320)
T PLN02780        201 ----SDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI--------------RRS--------S--  252 (320)
T ss_pred             ----CCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc--------------cCC--------C--
Confidence                11124679999999999998887663   7999999999886543110              000        0  


Q ss_pred             EeeeeHHHHHHHHHHHHhc
Q 022414          242 RSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~  260 (297)
                      ......+++|+.++..+..
T Consensus       253 ~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        253 FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             CCCCCHHHHHHHHHHHhCC
Confidence            1134789999999998864

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.68  E-value=5.5e-15  Score=123.90  Aligned_cols=210  Identities=15%  Similarity=0.061  Sum_probs=137.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC-----CCccch---hhhcC--CCceEEEecccCCcc-----
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-----GSKDNL---RKWIG--HPRFELIRHDVTEPL-----   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-----~~~~~~---~~~~~--~~~~~~~~~Dl~~~~-----   94 (297)
                      .++++++||||++.||+++++.|++.| .+|++++|...     ...+.+   ...+.  ...+..+.+|+++..     
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G-~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEG-ARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            457999999999999999999999999 89988877541     001111   11111  235678889998852     


Q ss_pred             -------cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----c---C----CeEEEEecceeec
Q 022414           95 -------LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V---G----ARILLTSTSEVYG  152 (297)
Q Consensus        95 -------~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~---~----~r~v~~Ss~~~~~  152 (297)
                             ..++|++|||||......    ..+++...+++|+.++..+++++..    .   +    -++|++||.....
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~  162 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ  162 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence                   236899999999754322    2344667889999998888877642    1   1    2799999876531


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcC
Q 022414          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG  229 (297)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~  229 (297)
                                      +......|+.+|.+.+.+.+.++.+   .+++++.+.|+ +..+.        ...........
T Consensus       163 ----------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~--------~~~~~~~~~~~  217 (286)
T PRK07791        163 ----------------GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM--------TETVFAEMMAK  217 (286)
T ss_pred             ----------------CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc--------chhhHHHHHhc
Confidence                            2222356999999999999887765   57999999997 42221        01111111111


Q ss_pred             CCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Ccc-EEecCCC
Q 022414          230 EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGP-INIGNPG  272 (297)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~-~~i~~~~  272 (297)
                      ..       ........++|+|+++++++....   +|. +.+.+|.
T Consensus       218 ~~-------~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        218 PE-------EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             Cc-------ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence            11       011135679999999999987543   454 4555443

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.68  E-value=8.1e-16  Score=124.92  Aligned_cols=166  Identities=19%  Similarity=0.154  Sum_probs=119.6

Q ss_pred             cccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc---cchhhhcCCCceEEEecccCCc---------
Q 022414           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIGHPRFELIRHDVTEP---------   93 (297)
Q Consensus        26 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~---------   93 (297)
                      +...+.+|.|+|||||..||.+++.+|.+.| ..++++.|.....+   +++.+.....++..+++|++|.         
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G-~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRG-AKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCC-CceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence            4456678999999999999999999999999 77777777544322   2333333333589999999986         


Q ss_pred             ---ccCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcC-CeEEEEecceeecCCCCCCCCC
Q 022414           94 ---LLIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        94 ---~~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                         .+.++|++|||||.......    ..+....+++|+.++..+.+++    ++.+ -++|.+||...+          
T Consensus        85 ~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~----------  154 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK----------  154 (282)
T ss_pred             HHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc----------
Confidence               23479999999998763222    2234557899999987777666    5555 489999998764          


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHhCCcE--E--EEeeccccC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI--R--IARIFNTYG  208 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~--~--ivrp~~v~G  208 (297)
                            .+.+..+.|..||.+.+.+.+.+.++..-..  +  .+-||.|-.
T Consensus       155 ------~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~T  199 (282)
T KOG1205|consen  155 ------MPLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIET  199 (282)
T ss_pred             ------cCCCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceee
Confidence                  2333335799999999999999887753222  1  366766543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.68  E-value=3.1e-15  Score=123.61  Aligned_cols=214  Identities=14%  Similarity=0.055  Sum_probs=140.7

Q ss_pred             cCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCC-C-ccchhhhcCC-CceEEEecccCCcc----------
Q 022414           30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTG-S-KDNLRKWIGH-PRFELIRHDVTEPL----------   94 (297)
Q Consensus        30 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~-~-~~~~~~~~~~-~~~~~~~~Dl~~~~----------   94 (297)
                      ..+|+++||||+  +.||+++++.|.+.| ++|++..|+... + .+.+.+.... ..+..+++|+++..          
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAG-AELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCC-CEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            457899999986  799999999999999 899887765321 1 1222222111 24567889998862          


Q ss_pred             --cCCcCEEEEccCCCCC----cc----cccChhhhHHHhHHHHHHHHHHHHH---cCCeEEEEecceeecCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASP----IF----YKYNPVKTIKTNVIGTLNMLGLAKR---VGARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~----~~----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                        ..++|++|||||....    ..    ..+++...+++|+.++..+++++.+   .+.++|++||....          
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~----------  152 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGV----------  152 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccc----------
Confidence              2369999999996531    11    2234567788999998888877643   22479999986542          


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                            .+......|+.+|.+.+.+.+.++.+.   +++++.+.||.+-.+..... .. .......+....+       
T Consensus       153 ------~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~~-~~~~~~~~~~~~p-------  217 (258)
T PRK07370        153 ------RAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-GG-ILDMIHHVEEKAP-------  217 (258)
T ss_pred             ------cCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-cc-chhhhhhhhhcCC-------
Confidence                  122234579999999999999988763   69999999998876531100 00 0111111111111       


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                        ...+...+|+|+++.+++....   .| .+.+.++
T Consensus       218 --~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg  252 (258)
T PRK07370        218 --LRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG  252 (258)
T ss_pred             --cCcCCCHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence              1246678999999999998643   44 4555544

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.68  E-value=4.9e-15  Score=119.70  Aligned_cols=183  Identities=16%  Similarity=0.112  Sum_probs=129.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------c--CCcCEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------L--IEVDQI  101 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~--~~~d~v  101 (297)
                      |++++||||+|+||+++++.|++.| ++|++++|+....    ... ...+++++.+|+++..        .  .++|++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G-~~v~~~~r~~~~~----~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~v   74 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADG-WRVIATARDAAAL----AAL-QALGAEALALDVADPASVAGLAWKLDGEALDAA   74 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCC-CEEEEEECCHHHH----HHH-HhccceEEEecCCCHHHHHHHHHHhcCCCCCEE
Confidence            4689999999999999999999999 8999999864322    111 1234678899998762        1  248999


Q ss_pred             EEccCCCCCcc------cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEeccee-ecCCCCCCCCCCCCCCCCCC
Q 022414          102 YHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEV-YGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       102 i~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~~  170 (297)
                      ||++|......      ..++++..++.|+.++..+++++.+    .+.+++++||... ++..              +.
T Consensus        75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~  140 (222)
T PRK06953         75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA--------------TG  140 (222)
T ss_pred             EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc--------------cC
Confidence            99999753211      3345677899999999999988864    2236888887643 3321              11


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHh-CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQH-GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  249 (297)
                      .+...|..+|...+.+++.+..+. +++++.++|+.+..+...                        +    ...+..++
T Consensus       141 ~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~------------------------~----~~~~~~~~  192 (222)
T PRK06953        141 TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG------------------------A----QAALDPAQ  192 (222)
T ss_pred             CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC------------------------C----CCCCCHHH
Confidence            122359999999999998887654 688999999888765310                        0    01346688


Q ss_pred             HHHHHHHHHhcCC
Q 022414          250 MVDGLIRLMEGEN  262 (297)
Q Consensus       250 va~~~~~~~~~~~  262 (297)
                      .++.++.++....
T Consensus       193 ~~~~~~~~~~~~~  205 (222)
T PRK06953        193 SVAGMRRVIAQAT  205 (222)
T ss_pred             HHHHHHHHHHhcC
Confidence            8888887766543

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.68  E-value=3.1e-15  Score=118.73  Aligned_cols=176  Identities=21%  Similarity=0.242  Sum_probs=125.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCEEEEc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQIYHL  104 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~vi~~  104 (297)
                      |+++||||+|.||+++++.|.++  ++|++++|+..                .+++|+++..        ..++|++||+
T Consensus         1 ~~vlItGas~giG~~la~~l~~~--~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~   62 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR--HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSA   62 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc--CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence            68999999999999999999887  78999888531                2456776642        2369999999


Q ss_pred             cCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHH
Q 022414          105 ACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYD  177 (297)
Q Consensus       105 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~  177 (297)
                      ||......    ..+++.+.+++|+.+..++++++.+.   +.+++++||....                .+......|+
T Consensus        63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~----------------~~~~~~~~Y~  126 (199)
T PRK07578         63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD----------------EPIPGGASAA  126 (199)
T ss_pred             CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC----------------CCCCCchHHH
Confidence            99654322    23345667889999999999888652   2378888886542                1233346799


Q ss_pred             HhHHHHHHHHHHHHHH--hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHH
Q 022414          178 EGKRVAETLMFDYHRQ--HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (297)
Q Consensus       178 ~sK~~~e~~~~~~~~~--~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  255 (297)
                      .+|...+.+.+.++.+  .++++..++|+.+-.+..         ..      +..+  .+     ..++..+|+|+++.
T Consensus       127 ~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~---------~~------~~~~--~~-----~~~~~~~~~a~~~~  184 (199)
T PRK07578        127 TVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE---------KY------GPFF--PG-----FEPVPAARVALAYV  184 (199)
T ss_pred             HHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh---------hh------hhcC--CC-----CCCCCHHHHHHHHH
Confidence            9999999999888765  479999999987743310         00      0000  01     13578999999999


Q ss_pred             HHHhcCCCc
Q 022414          256 RLMEGENTG  264 (297)
Q Consensus       256 ~~~~~~~~~  264 (297)
                      .+++....|
T Consensus       185 ~~~~~~~~g  193 (199)
T PRK07578        185 RSVEGAQTG  193 (199)
T ss_pred             HHhccceee
Confidence            999865533

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.2e-15  Score=140.67  Aligned_cols=194  Identities=14%  Similarity=0.067  Sum_probs=138.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....... ...+.++.+|+++..            ..
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAG-ATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            457899999999999999999999999 9999999965332222221111 236888999999862            12


Q ss_pred             CcCEEEEccCCCCCccc------ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFY------KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ++|++|||||.......      .+++...+++|+.++..+.+++    ++.+. ++|++||...+..            
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------  515 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN------------  515 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC------------
Confidence            59999999996532211      1345677899999988876665    44555 8999999887632            


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                          ......|+.+|.+.+.+.+.++.+   .+++++.++||.+..+...+.               ...   .    ..
T Consensus       516 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~---------------~~~---~----~~  569 (657)
T PRK07201        516 ----APRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT---------------KRY---N----NV  569 (657)
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc---------------ccc---c----CC
Confidence                222356999999999999887765   479999999999987642211               000   0    01


Q ss_pred             eeeeHHHHHHHHHHHHhcCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~  262 (297)
                      .....+++|+.++..+.+..
T Consensus       570 ~~~~~~~~a~~i~~~~~~~~  589 (657)
T PRK07201        570 PTISPEEAADMVVRAIVEKP  589 (657)
T ss_pred             CCCCHHHHHHHHHHHHHhCC
Confidence            35688999999998877643

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=1e-14  Score=120.67  Aligned_cols=212  Identities=13%  Similarity=-0.007  Sum_probs=138.4

Q ss_pred             CCCEEEEEcC--CchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcc------------c
Q 022414           31 SNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL------------L   95 (297)
Q Consensus        31 ~~~~ilItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~------------~   95 (297)
                      .+++++||||  ++.||.++++.|++.| ++|++.+|... ..+.+...... .....+.+|+++..            .
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G-~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREG-AELAFTYVGDR-FKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCC-CeEEEEccchH-HHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence            4789999996  6799999999999999 99988766421 12222222111 12346789998762            2


Q ss_pred             CCcCEEEEccCCCCCc---------ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPI---------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      .++|++|||||.....         ...+++...+++|+.+...+.+++.+.   +-++|++||....            
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~------------  150 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE------------  150 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc------------
Confidence            3699999999975421         122345567899999998888887542   2379999986542            


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                          .+......|+.+|.+.+.+.+.++.+   .+++++.+.||.+-.+..... .. .......+....  ++      
T Consensus       151 ----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~-~~~~~~~~~~~~--p~------  216 (260)
T PRK06997        151 ----RVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGI-KD-FGKILDFVESNA--PL------  216 (260)
T ss_pred             ----cCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccc-cc-hhhHHHHHHhcC--cc------
Confidence                12222356999999999999988875   479999999998866421100 00 011111111111  11      


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                       ..+..++|+|+++.+++....   +| .+.+.++
T Consensus       217 -~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        217 -RRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             -cccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence             235788999999999998643   33 4555544

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=1.4e-14  Score=119.53  Aligned_cols=212  Identities=15%  Similarity=0.082  Sum_probs=137.3

Q ss_pred             cCCCEEEEEcC--CchhHHHHHHHHHhcCCCeEEEEecCCC-CCccchhhhcCCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+++++||||  ++.||.++++.|.++| ++|++++|+.. ...+.+...+. ..+.++++|+++..            
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G-~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQG-AEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCC-CEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            35789999999  8999999999999999 99999887531 11122222222 25678899998862            


Q ss_pred             cCCcCEEEEccCCCCCc-----c---cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPI-----F---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~-----~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      ..++|++|||||.....     .   .+++....+++|+.++..+++++...   +-+++++|+....            
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~------------  150 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV------------  150 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc------------
Confidence            23699999999975321     1   22334556899999988888777432   2367877753211            


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                           +......|+.+|...+.+.+.++.+   .+++++.+.||.+..+...... . .......+....++        
T Consensus       151 -----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~-~-~~~~~~~~~~~~p~--------  215 (256)
T PRK07889        151 -----AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIP-G-FELLEEGWDERAPL--------  215 (256)
T ss_pred             -----cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhccc-C-cHHHHHHHHhcCcc--------
Confidence                 1122356899999999999888765   4799999999988765321100 0 01111111111111        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Ccc-EEecC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TGP-INIGN  270 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~~-~~i~~  270 (297)
                      .+.+..++|+|+++++++....   .|. +.+.+
T Consensus       216 ~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdg  249 (256)
T PRK07889        216 GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDG  249 (256)
T ss_pred             ccccCCHHHHHHHHHHHhCcccccccceEEEEcC
Confidence            0135788999999999998643   443 44444

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.65  E-value=3.1e-14  Score=120.94  Aligned_cols=228  Identities=12%  Similarity=0.100  Sum_probs=139.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------cCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ++++++||||++.||.++++.|+++|.++|++++|+.....+....+. ....+.++.+|+++..            ..+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            368999999999999999999999985688888886533222111111 1235678889998762            235


Q ss_pred             cCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHH----HHcC---CeEEEEecceeecCCCC----CCCCC
Q 022414           98 VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLA----KRVG---ARILLTSTSEVYGDPLV----HPQDE  161 (297)
Q Consensus        98 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~r~v~~Ss~~~~~~~~~----~~~~e  161 (297)
                      +|++||+||...+.     ...+.....+++|+.+...+++++    ++.+   .++|++||...+.....    .+...
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            99999999964321     122445667899999987776655    3342   48999999876532100    00000


Q ss_pred             CC-------------CCCCCCCCCCChHHHhHHHHHHHHHHHHHH----hCCcEEEEeeccccCCCCCCCChhHHHHHHH
Q 022414          162 SY-------------WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIA  224 (297)
Q Consensus       162 ~~-------------~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~  224 (297)
                      ..             +....+..+...|..||.+...+.+.+.++    .++.++.++||.|...............+..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~  241 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP  241 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence            00             001123345677999999988888777654    3699999999988533221111111111111


Q ss_pred             HHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---CccEEe
Q 022414          225 QAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPINI  268 (297)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i  268 (297)
                      ......   .       ..+..+++.|+.++.++..+.   +|.|.-
T Consensus       242 ~~~~~~---~-------~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       242 PFQKYI---T-------KGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             HHHHHH---h-------ccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            111100   0       013578888998888777543   565554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.65  E-value=9.7e-14  Score=113.47  Aligned_cols=191  Identities=15%  Similarity=0.120  Sum_probs=123.7

Q ss_pred             cccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCc
Q 022414           24 RFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEV   98 (297)
Q Consensus        24 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~   98 (297)
                      |+.....++++++||||+|+||+++++.|+++| ++|++++|+.....   ..... .....+.+|+++..     ..++
T Consensus         6 ~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G-~~Vi~~~r~~~~~~---~~~~~-~~~~~~~~D~~~~~~~~~~~~~i   80 (245)
T PRK12367          6 PMAQSTWQGKRIGITGASGALGKALTKAFRAKG-AKVIGLTHSKINNS---ESNDE-SPNEWIKWECGKEESLDKQLASL   80 (245)
T ss_pred             hhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEECCchhhh---hhhcc-CCCeEEEeeCCCHHHHHHhcCCC
Confidence            444555668999999999999999999999999 99999998642111   11111 12256788888652     3469


Q ss_pred             CEEEEccCCCCCcc-cccChhhhHHHhHHHHHHHHHHHHHc--------CCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF-YKYNPVKTIKTNVIGTLNMLGLAKRV--------GARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++|||||...... ..+++...+++|+.++..+++++.+.        +..++..||.....                +
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~----------------~  144 (245)
T PRK12367         81 DVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ----------------P  144 (245)
T ss_pred             CEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC----------------C
Confidence            99999999643322 24567788999999999999887441        22344444433221                1


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHH-------HhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHR-------QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~-------~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                      . ....|+.+|.+.+.+. .+..       ..++.+..+.|+.+..+.                   .+          .
T Consensus       145 ~-~~~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~-------------------~~----------~  193 (245)
T PRK12367        145 A-LSPSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSEL-------------------NP----------I  193 (245)
T ss_pred             C-CCchhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCccccc-------------------Cc----------c
Confidence            1 2346999999986543 3322       235666666665432110                   00          0


Q ss_pred             eeeeHHHHHHHHHHHHhcCCCccE
Q 022414          243 SFCYVSDMVDGLIRLMEGENTGPI  266 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~~~~~  266 (297)
                      ..+..+|+|+.++.++.++...++
T Consensus       194 ~~~~~~~vA~~i~~~~~~~~~~~~  217 (245)
T PRK12367        194 GIMSADFVAKQILDQANLGLYLII  217 (245)
T ss_pred             CCCCHHHHHHHHHHHHhcCCceEE
Confidence            146789999999999987754433

>PRK05599 hypothetical protein; Provisional

Probab=99.64  E-value=2.4e-14  Score=117.42  Aligned_cols=196  Identities=14%  Similarity=0.134  Sum_probs=130.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cCCc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      |+++||||++.||.++++.|. +| ++|++++|+.....+....+..  ...+.++++|++|..            ..++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HG-EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999998 58 9999999865433222122211  124778899998862            2359


Q ss_pred             CEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHH----HHHcC--CeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGL----AKRVG--ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        99 d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~----~~~~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      |++||+||.......    .....+.+.+|+.+...+++.    +.+.+  .++|++||....-                
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----------------  142 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR----------------  142 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc----------------
Confidence            999999997543221    122334556777776655443    44443  3899999976431                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+..                .+..     ...   -..
T Consensus       143 ~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~----------------~~~~-----~~~---~~~  198 (246)
T PRK05599        143 ARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT----------------TGMK-----PAP---MSV  198 (246)
T ss_pred             CCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh----------------cCCC-----CCC---CCC
Confidence            2223356999999999999888776   368999999988765421                0000     000   024


Q ss_pred             eHHHHHHHHHHHHhcCC-CccEEecC
Q 022414          246 YVSDMVDGLIRLMEGEN-TGPINIGN  270 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~-~~~~~i~~  270 (297)
                      ..+|+|++++.++..+. .+.+.+..
T Consensus       199 ~pe~~a~~~~~~~~~~~~~~~~~~~~  224 (246)
T PRK05599        199 YPRDVAAAVVSAITSSKRSTTLWIPG  224 (246)
T ss_pred             CHHHHHHHHHHHHhcCCCCceEEeCc
Confidence            78999999999999865 34555543

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.64  E-value=7.9e-15  Score=118.70  Aligned_cols=161  Identities=15%  Similarity=0.111  Sum_probs=114.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc----------cCCcCEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL----------LIEVDQI  101 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~----------~~~~d~v  101 (297)
                      +++++||||+|++|+++++.|+++| ++|++++|+..... .+..   ..++.+..+|+++..          ..++|+|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G-~~V~~~~r~~~~~~-~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~v   75 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERG-WQVTATVRGPQQDT-ALQA---LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLL   75 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCC-CEEEEEeCCCcchH-HHHh---ccccceEEcCCCCHHHHHHHHHHhhcCCCCEE
Confidence            3789999999999999999999999 99999999754322 1221   235677888988752          1259999


Q ss_pred             EEccCCCCCcc------cccChhhhHHHhHHHHHHHHHHHHHc---C-CeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414          102 YHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKRV---G-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus       102 i~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~-~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      ||++|......      ..++....+.+|+.+...+++++.+.   + ..++++||....  ...           .+..
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~--~~~-----------~~~~  142 (225)
T PRK08177         76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGS--VEL-----------PDGG  142 (225)
T ss_pred             EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccc--ccc-----------CCCC
Confidence            99998753211      12345567788999988888887542   2 367778775321  100           1122


Q ss_pred             CCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCC
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPR  210 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~  210 (297)
                      ....|+.+|.+.+.+++.++.+   .++++..++||++-.+.
T Consensus       143 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        143 EMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             CccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence            3346999999999999988765   36899999998886553

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.63  E-value=3.7e-14  Score=114.36  Aligned_cols=197  Identities=13%  Similarity=0.087  Sum_probs=142.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..++.|+||||++.+|++++.+++++| .++.+.+.+.....+..........+....+|+++..            ...
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg-~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRG-AKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhC-CeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            458999999999999999999999999 8999999987766655444332236888999999862            235


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HH-cCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KR-VGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~-~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||.......    +++.+.++++|+.+.....++.    .+ +...+|-++|...+-                
T Consensus       115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~----------------  178 (300)
T KOG1201|consen  115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF----------------  178 (300)
T ss_pred             ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc----------------
Confidence            9999999998765443    3445667889999888777665    23 334788888876542                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH------hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ------HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                      +..-...|..||.++..+.+.+..+      .+++++.+.|+.+=..                +..+.     ..-....
T Consensus       179 g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg----------------mf~~~-----~~~~~l~  237 (300)
T KOG1201|consen  179 GPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG----------------MFDGA-----TPFPTLA  237 (300)
T ss_pred             CCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc----------------ccCCC-----CCCcccc
Confidence            2233356999999999888777643      3588888888665421                11111     1113345


Q ss_pred             eeeeHHHHHHHHHHHHhcCCCc
Q 022414          243 SFCYVSDMVDGLIRLMEGENTG  264 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~~~  264 (297)
                      +.+..+.+|+.++.++..+..+
T Consensus       238 P~L~p~~va~~Iv~ai~~n~~~  259 (300)
T KOG1201|consen  238 PLLEPEYVAKRIVEAILTNQAG  259 (300)
T ss_pred             CCCCHHHHHHHHHHHHHcCCcc
Confidence            7899999999999999987744

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=2.9e-14  Score=127.16  Aligned_cols=208  Identities=17%  Similarity=0.090  Sum_probs=138.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      ++++++||||+|.||.++++.|.++| .+|+++++..  ..+.+.......+...+.+|+++..            ..++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~G-a~vi~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDG-AHVVCLDVPA--AGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEeCCc--cHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence            57999999999999999999999999 9999988742  2222222222224467888998752            1258


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcC-----CeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG-----ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++||+||......    ..++....+++|+.++.++.+++....     .+||++||...+..                
T Consensus       286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g----------------  349 (450)
T PRK08261        286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAG----------------  349 (450)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC----------------
Confidence            99999999764322    234466778999999999999987632     37999998765421                


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|..+|...+.+++.+..+   .++.+..+.|+.+-.+...     .++.......... ..       ......
T Consensus       350 ~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~-----~~~~~~~~~~~~~-~~-------l~~~~~  416 (450)
T PRK08261        350 NRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA-----AIPFATREAGRRM-NS-------LQQGGL  416 (450)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh-----ccchhHHHHHhhc-CC-------cCCCCC
Confidence            112356999999998888877654   4799999999887543211     0111111111110 00       112245


Q ss_pred             HHHHHHHHHHHHhcCC---Cc-cEEecC
Q 022414          247 VSDMVDGLIRLMEGEN---TG-PINIGN  270 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~---~~-~~~i~~  270 (297)
                      .+|+|+++.+++....   +| .+.+++
T Consensus       417 p~dva~~~~~l~s~~~~~itG~~i~v~g  444 (450)
T PRK08261        417 PVDVAETIAWLASPASGGVTGNVVRVCG  444 (450)
T ss_pred             HHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence            6899999999987543   34 445544

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.63  E-value=3.4e-15  Score=114.53  Aligned_cols=233  Identities=15%  Similarity=0.050  Sum_probs=158.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHH-----hcC---CCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLM-----ENE---KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~-----~~g---~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~  103 (297)
                      .++.++-+.+|+|+..|.....     +.+   .|.|++++|++...           ++++-..|..-.. ..++..+|
T Consensus        12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-----------ritw~el~~~Gip-~sc~a~vn   79 (315)
T KOG3019|consen   12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-----------RITWPELDFPGIP-ISCVAGVN   79 (315)
T ss_pred             cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-----------ccccchhcCCCCc-eehHHHHh
Confidence            4678888999999988877332     111   28999999975332           2333333322111 13455555


Q ss_pred             ccC----CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC---eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChH
Q 022414          104 LAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (297)
Q Consensus       104 ~a~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (297)
                      ++|    ....+..++-..+.+...+..+..++++..+..-   .+|.+|..+.|-.+....++|+     .+......+
T Consensus        80 a~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~-----~~~qgfd~~  154 (315)
T KOG3019|consen   80 AVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEK-----IVHQGFDIL  154 (315)
T ss_pred             hhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccc-----cccCChHHH
Confidence            444    2222222333445556667778999999988764   4999999999988888888877     344443333


Q ss_pred             HHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHH--HHHcCCCeEEecCCceeEeeeeHHHHHHHH
Q 022414          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIA--QAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      ...-.+-|.......  ...+..++|.|.|.|.+.     ..+..++.  ++-.|.++   |+|.++++|||++|++..+
T Consensus       155 srL~l~WE~aA~~~~--~~~r~~~iR~GvVlG~gG-----Ga~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~~li  224 (315)
T KOG3019|consen  155 SRLCLEWEGAALKAN--KDVRVALIRIGVVLGKGG-----GALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLVNLI  224 (315)
T ss_pred             HHHHHHHHHHhhccC--cceeEEEEEEeEEEecCC-----cchhhhhhhhhhccCCcC---CCCCeeeeeeehHHHHHHH
Confidence            333333333322222  248999999999999873     33333333  34455554   8999999999999999999


Q ss_pred             HHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          255 IRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       255 ~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      .++++++. .|..|-..+.+.+..||++.+.++++.+.
T Consensus       225 ~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~  262 (315)
T KOG3019|consen  225 YEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPS  262 (315)
T ss_pred             HHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCc
Confidence            99999977 99999999999999999999999998764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.63  E-value=7.4e-15  Score=121.25  Aligned_cols=197  Identities=11%  Similarity=0.015  Sum_probs=130.3

Q ss_pred             EEEEEcCCchhHHHHHHHHHh----cCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCccc-----------
Q 022414           34 RILVTGGAGFIGSHLVDKLME----NEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~----~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      .++||||++.||.++++.|.+    .| ++|+++.|+.....+....+.   ....+.++.+|+++...           
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPG-SVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCC-cEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            589999999999999999997    68 999999996543322222121   12357888999987521           


Q ss_pred             -----CCcCEEEEccCCCCCcc-------cccChhhhHHHhHHHHHHHHHHHHH----c-C--CeEEEEecceeecCCCC
Q 022414           96 -----IEVDQIYHLACPASPIF-------YKYNPVKTIKTNVIGTLNMLGLAKR----V-G--ARILLTSTSEVYGDPLV  156 (297)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~-~--~r~v~~Ss~~~~~~~~~  156 (297)
                           .+.|++|||||......       ..++....+++|+.++..+.+.+.+    . +  .++|++||...+.    
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~----  156 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ----  156 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC----
Confidence                 01369999999643211       1234567889999998777766633    2 2  3799999976531    


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHH-----HHHHHHHc
Q 022414          157 HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVS-----NFIAQAIR  228 (297)
Q Consensus       157 ~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~-----~~~~~~~~  228 (297)
                                  +......|+.+|.+.+.+.+.++.+   .++.++.+.||++-.+..    ....+     .....+..
T Consensus       157 ------------~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~----~~~~~~~~~~~~~~~~~~  220 (256)
T TIGR01500       157 ------------PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQ----QQVREESVDPDMRKGLQE  220 (256)
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHH----HHHHHhcCChhHHHHHHH
Confidence                        2233467999999999999988765   468999999988865431    00100     01111111


Q ss_pred             CCCeEEecCCceeEeeeeHHHHHHHHHHHHhc
Q 022414          229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                      ..+         ...+..++|+|+.++.++++
T Consensus       221 ~~~---------~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       221 LKA---------KGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             HHh---------cCCCCCHHHHHHHHHHHHhc
Confidence            100         11367889999999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06484 short chain dehydrogenase; Validated

Probab=99.63  E-value=3.7e-14  Score=128.90  Aligned_cols=202  Identities=15%  Similarity=0.152  Sum_probs=136.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      .+++++||||++.||.++++.|.++| ++|++++|+.....+... .+ ..++..+++|+++..            ..++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAG-DQVVVADRNVERARERAD-SL-GPDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-Hh-CCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999 999999986433222111 11 235677899998762            1359


Q ss_pred             CEEEEccCCCCC------cccccChhhhHHHhHHHHHHHHHHHHHc------CCeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASP------IFYKYNPVKTIKTNVIGTLNMLGLAKRV------GARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        99 d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      |++||+||...+      ....+++...+++|+.++..+++++.+.      |.++|++||.....              
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~--------------  146 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV--------------  146 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC--------------
Confidence            999999986321      1233456778899999999888887542      23899999976542              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|...+.+.+.++.+   .+++++.+.|+.+..+......... ..........  +.       ...
T Consensus       147 --~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~-~~~~~~~~~~--~~-------~~~  214 (520)
T PRK06484        147 --ALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAG-KLDPSAVRSR--IP-------LGR  214 (520)
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccc-hhhhHHHHhc--CC-------CCC
Confidence              1222357999999999999888765   4799999999988655421000000 0000001110  10       113


Q ss_pred             eeeHHHHHHHHHHHHhcC
Q 022414          244 FCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~  261 (297)
                      +...+|+|+++.+++...
T Consensus       215 ~~~~~~va~~v~~l~~~~  232 (520)
T PRK06484        215 LGRPEEIAEAVFFLASDQ  232 (520)
T ss_pred             CcCHHHHHHHHHHHhCcc
Confidence            567899999999988754

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.60  E-value=8.3e-14  Score=120.63  Aligned_cols=184  Identities=15%  Similarity=0.119  Sum_probs=119.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~  104 (297)
                      .++|+++||||+|+||++++++|.++| .+|++++|+.....+....  ....+..+.+|+++..     ..++|++||+
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G-~~Vi~l~r~~~~l~~~~~~--~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn  252 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQG-AKVVALTSNSDKITLEING--EDLPVKTLHWQVGQEAALAELLEKVDILIIN  252 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhh--cCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence            457999999999999999999999999 9999998864322111111  1124667788998763     3579999999


Q ss_pred             cCCCCCc-ccccChhhhHHHhHHHHHHHHHHHHH----cC---C--eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC
Q 022414          105 ACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKR----VG---A--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (297)
Q Consensus       105 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~--r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~  174 (297)
                      ||..... ...++..+.+++|+.++..+++++.+    .+   .  .++.+|+.. .                .+ ....
T Consensus       253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~----------------~~-~~~~  314 (406)
T PRK07424        253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-V----------------NP-AFSP  314 (406)
T ss_pred             CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-c----------------cC-CCch
Confidence            9865432 22345677899999999999988743    22   1  234444321 1                11 1124


Q ss_pred             hHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      .|+.+|.+.+.+..-...+.++.+..+.|    ||..+..                     .    ....+..+|+|+.+
T Consensus       315 ~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~----gp~~t~~---------------------~----~~~~~spe~vA~~i  365 (406)
T PRK07424        315 LYELSKRALGDLVTLRRLDAPCVVRKLIL----GPFKSNL---------------------N----PIGVMSADWVAKQI  365 (406)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCceEEEEe----CCCcCCC---------------------C----cCCCCCHHHHHHHH
Confidence            69999999988753322233444444444    3431110                     0    01246889999999


Q ss_pred             HHHHhcCCC
Q 022414          255 IRLMEGENT  263 (297)
Q Consensus       255 ~~~~~~~~~  263 (297)
                      +.+++++..
T Consensus       366 l~~i~~~~~  374 (406)
T PRK07424        366 LKLAKRDFR  374 (406)
T ss_pred             HHHHHCCCC
Confidence            999988754

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.60  E-value=4.1e-14  Score=106.22  Aligned_cols=208  Identities=15%  Similarity=0.112  Sum_probs=143.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcc------------cCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~------------~~~   97 (297)
                      +.+.++||||+..||+++++.|.+.| .+|.+.+++... .+...+.+.. ..-..+.+|+.+..            +-.
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~G-arv~v~dl~~~~-A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKG-ARVAVADLDSAA-AEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcC-cEEEEeecchhh-HHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            46889999999999999999999999 999998886543 2333333433 34456788888652            225


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc-------CCeEEEEecceee-cCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-------GARILLTSTSEVY-GDPLVHPQDESYWG  165 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~r~v~~Ss~~~~-~~~~~~~~~e~~~~  165 (297)
                      +++++||||++....    ..+++.+.+.+|+.+...+.+++.+.       +..+|.+||+-.. |+.           
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~-----------  159 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNF-----------  159 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccc-----------
Confidence            999999999886533    45678888999999998888888654       2379999997432 111           


Q ss_pred             CCCCCCCCChHHHhHHHHHHH----HHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          166 NVNPIGVRSCYDEGKRVAETL----MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~----~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                            ..+.|..+|.-.-.+    .++.++ .++++..+.||+|-.|...    ...+..++.+....++.        
T Consensus       160 ------GQtnYAAsK~GvIgftktaArEla~-knIrvN~VlPGFI~tpMT~----~mp~~v~~ki~~~iPmg--------  220 (256)
T KOG1200|consen  160 ------GQTNYAASKGGVIGFTKTAARELAR-KNIRVNVVLPGFIATPMTE----AMPPKVLDKILGMIPMG--------  220 (256)
T ss_pred             ------cchhhhhhcCceeeeeHHHHHHHhh-cCceEeEeccccccChhhh----hcCHHHHHHHHccCCcc--------
Confidence                  113366665433222    222333 3899999999999888632    24456677777766653        


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                       .+...+|+|..+.++....+    +..+.+.+|
T Consensus       221 -r~G~~EevA~~V~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  221 -RLGEAEEVANLVLFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             -ccCCHHHHHHHHHHHhccccccccceeEEEecc
Confidence             34567999999999885543    234555543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.58  E-value=3.7e-13  Score=110.86  Aligned_cols=221  Identities=14%  Similarity=0.059  Sum_probs=146.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc----CCCceEEEecccCCcc---------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPL---------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~---------   94 (297)
                      ....+|.++|||++..||+++++.|.+.| .+|++.+|+.+...+....+.    ...++..+.+|+.+..         
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~G-a~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAG-AKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            34568999999999999999999999999 999999997654333322221    1245888999998652         


Q ss_pred             ----cCCcCEEEEccCCCCCcc-----cccChhhhHHHhHH-HHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCC
Q 022414           95 ----LIEVDQIYHLACPASPIF-----YKYNPVKTIKTNVI-GTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQ  159 (297)
Q Consensus        95 ----~~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~-~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~  159 (297)
                          +.++|+++|+||......     ..+.++..+++|+. ....+.+++..    .+. .++++||...+...     
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~-----  157 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG-----  157 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC-----
Confidence                346999999999766432     34556678889999 46666555533    233 67888877654211     


Q ss_pred             CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCC-CCChhHHHHHHHHHHcCCCeEEe
Q 022414          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMN-IDDGRVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~  235 (297)
                               +..+ ..|+.+|.+.+++.+.++.+   .++++..+-||.|..+... .........+..........+  
T Consensus       158 ---------~~~~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p--  225 (270)
T KOG0725|consen  158 ---------PGSG-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP--  225 (270)
T ss_pred             ---------CCCc-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc--
Confidence                     1112 57999999999999988865   4799999999988877510 000001111111100111111  


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                           .-.+...+|+|+++.++.....    +..+.+.++
T Consensus       226 -----~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG  260 (270)
T KOG0725|consen  226 -----LGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGG  260 (270)
T ss_pred             -----cCCccCHHHHHHhHHhhcCcccccccCCEEEEeCC
Confidence                 1246789999999999888753    334444444

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.56  E-value=4.8e-14  Score=108.63  Aligned_cols=145  Identities=17%  Similarity=0.184  Sum_probs=109.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC--CCCCccchhhhc-CCCceEEEecccCCcc------------cCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY--FTGSKDNLRKWI-GHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~--~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      |+++||||+|.||+++++.|+++|.+.|+++.|+  .....+...++. ...++.++++|+++..            ...
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5799999999999999999999964788888886  111111111111 2357889999998862            236


Q ss_pred             cCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  172 (297)
                      +|++|||+|........    ++....++.|+.+...+.+++...+- ++|++||....                .+...
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~----------------~~~~~  144 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV----------------RGSPG  144 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT----------------SSSTT
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc----------------cCCCC
Confidence            99999999987743332    33557889999999999999988444 89999998764                23444


Q ss_pred             CChHHHhHHHHHHHHHHHHHH
Q 022414          173 RSCYDEGKRVAETLMFDYHRQ  193 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~  193 (297)
                      ...|..+|.+.+.+.+.++++
T Consensus       145 ~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  145 MSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHh
Confidence            578999999999999988776

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.56  E-value=2e-13  Score=106.01  Aligned_cols=157  Identities=15%  Similarity=0.095  Sum_probs=111.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccch---hhhc-CCCceEEEecccCCcc------------cC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---RKWI-GHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~---~~~~-~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ++++|+||+|++|.++++.|.++|.+.|+++.|+........   .... ...++.++.+|+++..            ..
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            479999999999999999999998447888888654332211   1111 1235678889998752            12


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      .+|.+||++|......    ..+++...++.|+.+...+++++++.+. +++++||.....                +..
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~----------------~~~  144 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVL----------------GNP  144 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhc----------------CCC
Confidence            4799999998654322    2244567789999999999999987776 788888865431                112


Q ss_pred             CCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccc
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT  206 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v  206 (297)
                      ....|+.+|...+.+++.+. ..+++.+.+.|+.+
T Consensus       145 ~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~  178 (180)
T smart00822      145 GQANYAAANAFLDALAAHRR-ARGLPATSINWGAW  178 (180)
T ss_pred             CchhhHHHHHHHHHHHHHHH-hcCCceEEEeeccc
Confidence            23569999999999986654 45788888888644

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN00015 protochlorophyllide reductase

Probab=99.55  E-value=4.5e-13  Score=113.55  Aligned_cols=222  Identities=13%  Similarity=0.114  Sum_probs=133.1

Q ss_pred             EEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------cCCcCEEE
Q 022414           36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------LIEVDQIY  102 (297)
Q Consensus        36 lItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~~~~d~vi  102 (297)
                      +||||++.||.+++++|+++|.+.|++.+|+.....+....+. ....+.++.+|+++..            ..++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            5999999999999999999985678888886432222111111 1235778899998762            13589999


Q ss_pred             EccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHH----HHcC---CeEEEEecceeecCCC--C-CC---CC----
Q 022414          103 HLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVG---ARILLTSTSEVYGDPL--V-HP---QD----  160 (297)
Q Consensus       103 ~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~r~v~~Ss~~~~~~~~--~-~~---~~----  160 (297)
                      ||||......     ..++....+++|+.+...+++.+    ++.+   .++|++||...+-...  . .+   ..    
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            9999753211     23446678899999977776554    3443   4899999976531100  0 00   00    


Q ss_pred             ------CC---CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHH
Q 022414          161 ------ES---YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAI  227 (297)
Q Consensus       161 ------e~---~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~  227 (297)
                            +.   .+.......+...|..||.+.+.+.+.++.+    .++.++.+.||+|................... .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~-~  239 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPP-F  239 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHH-H
Confidence                  00   0000012234567999999988777777654    36999999999995432211111111111000 0


Q ss_pred             cCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---CccEE
Q 022414          228 RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPIN  267 (297)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~  267 (297)
                      ..  ...       ..+..+++.|+.++.++....   +|.|.
T Consensus       240 ~~--~~~-------~~~~~pe~~a~~~~~l~~~~~~~~~G~~~  273 (308)
T PLN00015        240 QK--YIT-------KGYVSEEEAGKRLAQVVSDPSLTKSGVYW  273 (308)
T ss_pred             HH--HHh-------cccccHHHhhhhhhhhccccccCCCcccc
Confidence            00  000       124578999999998887643   55554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.55  E-value=4.4e-13  Score=112.12  Aligned_cols=219  Identities=16%  Similarity=0.093  Sum_probs=147.1

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc---------
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL---------   94 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~---------   94 (297)
                      .....++.++|||||+.||.+++++|..+| .+|+...|+.....+....+   .....+.++++|+++..         
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~G-a~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~  108 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRG-AHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF  108 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            444557999999999999999999999999 99999999864333332222   23457888999999862         


Q ss_pred             ---cCCcCEEEEccCCCCCcc--cccChhhhHHHhHHHHHHHHHHH----HHcC-CeEEEEecceeecC--CCCCCCCCC
Q 022414           95 ---LIEVDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGD--PLVHPQDES  162 (297)
Q Consensus        95 ---~~~~d~vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~v~~Ss~~~~~~--~~~~~~~e~  162 (297)
                         ....|++||+||......  ..+..+.++++|..+...+.+.+    ++.. .|+|++||..- +.  +......+.
T Consensus       109 ~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~  187 (314)
T KOG1208|consen  109 KKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEK  187 (314)
T ss_pred             HhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchh
Confidence               336999999999876544  23457889999999987776665    4444 59999999764 11  111111111


Q ss_pred             CCCCCCC-CCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNP-IGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~-~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                           .. ......|..||.+......++.++.  ++.+..+.||.+.++....  ...+...+.........       
T Consensus       188 -----~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r--~~~~~~~l~~~l~~~~~-------  253 (314)
T KOG1208|consen  188 -----AKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR--VNLLLRLLAKKLSWPLT-------  253 (314)
T ss_pred             -----ccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec--chHHHHHHHHHHHHHhc-------
Confidence                 11 2233369999999999999888775  5999999999998875322  11222222211111110       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC----CccE
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPI  266 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~  266 (297)
                           -..++-|+..+++..+|+    .|.|
T Consensus       254 -----ks~~~ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  254 -----KSPEQGAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             -----cCHHHHhhheehhccCccccCccccc
Confidence                 134556777777777775    5555

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.54  E-value=3.2e-13  Score=114.06  Aligned_cols=208  Identities=12%  Similarity=0.004  Sum_probs=129.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC------ccc---hhhhcC--CCceEEEecccCCcc----
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS------KDN---LRKWIG--HPRFELIRHDVTEPL----   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~------~~~---~~~~~~--~~~~~~~~~Dl~~~~----   94 (297)
                      ..+|+++||||++.||.++++.|++.| ++|++++|+....      .+.   ....+.  ...+..+++|+++..    
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAG-ATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            357999999999999999999999999 9999999874211      111   111111  124677899999862    


Q ss_pred             --------cCCcCEEEEcc-CCCC-----Ccc---cccChhhhHHHhHHHHHHHHHHHHH----cC-CeEEEEecceeec
Q 022414           95 --------LIEVDQIYHLA-CPAS-----PIF---YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYG  152 (297)
Q Consensus        95 --------~~~~d~vi~~a-~~~~-----~~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~v~~Ss~~~~~  152 (297)
                              +.++|++|||| |...     ...   ..++....+++|+.+...+++++.+    .+ -++|++||.....
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~  164 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY  164 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence                    23599999999 6321     111   1223445678888888777766633    33 3899998854321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcC
Q 022414          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG  229 (297)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~  229 (297)
                      ..             .+......|+.+|.+...+.+.++.+   .+++++.+.||.+-.+..        .....  ...
T Consensus       165 ~~-------------~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~--------~~~~~--~~~  221 (305)
T PRK08303        165 NA-------------THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMM--------LDAFG--VTE  221 (305)
T ss_pred             cC-------------cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHH--------HHhhc--cCc
Confidence            00             01112356999999999999888765   369999999987754320        00000  000


Q ss_pred             CCe-EEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          230 EPL-TVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       230 ~~~-~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      ... ...........+...+|+|+++++++..+
T Consensus       222 ~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        222 ENWRDALAKEPHFAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             cchhhhhccccccccCCCHHHHHHHHHHHHcCc
Confidence            000 00000000112447899999999999765

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.53  E-value=6.4e-13  Score=107.48  Aligned_cols=160  Identities=7%  Similarity=0.025  Sum_probs=110.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+++++||||++.||+++++.|.++| ++|+++.|+.....+....... ...+..+++|+.+..            +.
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G-~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLG-ATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999 9999999865433222221111 234667788988751            23


Q ss_pred             -CcCEEEEccCCCCCc-cc----ccChhhhHHHhHHHHHHHHHH----HHHcC--CeEEEEecceeecCCCCCCCCCCCC
Q 022414           97 -EVDQIYHLACPASPI-FY----KYNPVKTIKTNVIGTLNMLGL----AKRVG--ARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        97 -~~d~vi~~a~~~~~~-~~----~~~~~~~~~~n~~~~~~l~~~----~~~~~--~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       ++|++||++|..... ..    .++..+.+..|+.+...+++.    +++.+  ..+|++||...+             
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-------------  148 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-------------  148 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-------------
Confidence             699999999753322 11    122344556677666655444    34443  379999985421             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCC
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGP  209 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~  209 (297)
                            .....|+.+|...+.+.+.++.+   .++++..+.||.+-.+
T Consensus       149 ------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        149 ------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             ------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence                  12356999999999999888765   4799999999887765

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.52  E-value=3.2e-14  Score=105.01  Aligned_cols=201  Identities=17%  Similarity=0.115  Sum_probs=133.6

Q ss_pred             cccccccCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCCCceEEEecccCC-----cccCC
Q 022414           24 RFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-----PLLIE   97 (297)
Q Consensus        24 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~   97 (297)
                      ...+..+++|..+|+||||-.|+.+++.+++.+. .+|+++.|......+.      ...+.....|+..     ....+
T Consensus        10 lrEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------~k~v~q~~vDf~Kl~~~a~~~qg   83 (238)
T KOG4039|consen   10 LREDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------DKVVAQVEVDFSKLSQLATNEQG   83 (238)
T ss_pred             HHHHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------cceeeeEEechHHHHHHHhhhcC
Confidence            4456777899999999999999999999999985 4888888864322221      1234444455542     24568


Q ss_pred             cCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChH
Q 022414           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (297)
                      +|+.|.|.|.+.-.. .  .+.++++.-.....++++|++.|| .|+.+||....                  ...+..|
T Consensus        84 ~dV~FcaLgTTRgka-G--adgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd------------------~sSrFlY  142 (238)
T KOG4039|consen   84 PDVLFCALGTTRGKA-G--ADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD------------------PSSRFLY  142 (238)
T ss_pred             CceEEEeeccccccc-c--cCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC------------------cccceee
Confidence            999999887554221 1  333445555667789999999999 79999998752                  2334569


Q ss_pred             HHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHH
Q 022414          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      ...|.+.|+-+.++.-+   .++|+|||.+.|.+.......|...+....+..        -.++.--.++.-++.+++.
T Consensus       143 ~k~KGEvE~~v~eL~F~---~~~i~RPG~ll~~R~esr~geflg~~~~a~l~~--------~~~R~~s~pv~~~~~amvn  211 (238)
T KOG4039|consen  143 MKMKGEVERDVIELDFK---HIIILRPGPLLGERTESRQGEFLGNLTAALLRS--------RFQRLLSYPVYGDEVAMVN  211 (238)
T ss_pred             eeccchhhhhhhhcccc---EEEEecCcceecccccccccchhhheehhhhhh--------HHHhccCCchhhhhHhHhh
Confidence            99999999988766433   589999999999887655444444333322111        1112223345555677776


Q ss_pred             HHhcCC
Q 022414          257 LMEGEN  262 (297)
Q Consensus       257 ~~~~~~  262 (297)
                      .+..+.
T Consensus       212 ~~~~~~  217 (238)
T KOG4039|consen  212 VLNTSG  217 (238)
T ss_pred             ccccCC
Confidence            554443

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.52  E-value=1.1e-13  Score=113.17  Aligned_cols=205  Identities=20%  Similarity=0.207  Sum_probs=142.0

Q ss_pred             cCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------------cc-CCcCEEEE
Q 022414           39 GGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------------LL-IEVDQIYH  103 (297)
Q Consensus        39 Gat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------------~~-~~~d~vi~  103 (297)
                      |++  +.||.++++.|+++| ++|++++|+.....+.+..+....+..++.+|+++.            .. .++|++||
T Consensus         1 g~~~s~GiG~aia~~l~~~G-a~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEG-ANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTT-EEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  999999999999999 999999997654333344443333455799999876            23 56999999


Q ss_pred             ccCCCCC----cc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCC
Q 022414          104 LACPASP----IF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (297)
Q Consensus       104 ~a~~~~~----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  172 (297)
                      +++....    ..    ..+++...++.|+.+...+++++.+.   +-.+|++||....                .+...
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~----------------~~~~~  143 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQ----------------RPMPG  143 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGT----------------SBSTT
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhc----------------ccCcc
Confidence            9987654    11    12345667889999999988888552   2368899887643                12333


Q ss_pred             CChHHHhHHHHHHHHHHHHHH----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHH
Q 022414          173 RSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  248 (297)
                      ...|+.+|.+.+.+.+.++.+    .+++++.|.||.+..+...  .....+.+........++.         .+...+
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~--~~~~~~~~~~~~~~~~pl~---------r~~~~~  212 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTE--RIPGNEEFLEELKKRIPLG---------RLGTPE  212 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHH--HHHTHHHHHHHHHHHSTTS---------SHBEHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchh--ccccccchhhhhhhhhccC---------CCcCHH
Confidence            357999999999999888754    4799999999888754310  0001234444444443331         256899


Q ss_pred             HHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          249 DMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       249 Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      |+|+++++++....   .| .+.+.+|
T Consensus       213 evA~~v~fL~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  213 EVANAVLFLASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHHHHHHHHHSGGGTTGTSEEEEESTT
T ss_pred             HHHHHHHHHhCccccCccCCeEEECCC
Confidence            99999999998763   44 5566554

...

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.51  E-value=3.5e-12  Score=106.94  Aligned_cols=214  Identities=14%  Similarity=0.071  Sum_probs=133.7

Q ss_pred             ccCCCEEEEEcC--CchhHHHHHHHHHhcCCCeEEEEecCCCCCccc---hh--------hhcC---CCceEEEeccc--
Q 022414           29 FQSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LR--------KWIG---HPRFELIRHDV--   90 (297)
Q Consensus        29 ~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~---~~--------~~~~---~~~~~~~~~Dl--   90 (297)
                      ...+|+++||||  +..||.++++.|.+.| .+|++ .|.....++.   ..        ....   ......+.+|+  
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~G-a~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAG-AEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCC-CEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            356899999999  8999999999999999 98887 4432211100   00        0000   01134566676  


Q ss_pred             CCc------------------------------ccCCcCEEEEccCCCC----C--cccccChhhhHHHhHHHHHHHHHH
Q 022414           91 TEP------------------------------LLIEVDQIYHLACPAS----P--IFYKYNPVKTIKTNVIGTLNMLGL  134 (297)
Q Consensus        91 ~~~------------------------------~~~~~d~vi~~a~~~~----~--~~~~~~~~~~~~~n~~~~~~l~~~  134 (297)
                      .+.                              ...++|++|||||...    +  ....+++...+++|+.+...++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            211                              1125899999997432    1  113355777889999999998888


Q ss_pred             HHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCC-ChHHHhHHHHHHHHHHHHHH----hCCcEEEEeeccc
Q 022414          135 AKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNT  206 (297)
Q Consensus       135 ~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v  206 (297)
                      +...   +-++|++||.....                +.... ..|+.+|.+.+.+.+.++.+    .+++++.+.||.+
T Consensus       164 ~~p~m~~~G~II~isS~a~~~----------------~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v  227 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASER----------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPL  227 (303)
T ss_pred             HHHHHhcCCEEEEEechhhcC----------------CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCc
Confidence            7543   24899999876431                11112 36999999999999988875    3689999999888


Q ss_pred             cCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       207 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      -.+.....  ..............++         ..+...+|+|.++++++....   .| .+.+.++
T Consensus       228 ~T~~~~~~--~~~~~~~~~~~~~~pl---------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        228 GSRAAKAI--GFIDDMIEYSYANAPL---------QKELTADEVGNAAAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             cCchhhcc--cccHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            76542110  0011111111111111         134678999999999997543   44 4555544

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.50  E-value=2.3e-13  Score=104.82  Aligned_cols=213  Identities=21%  Similarity=0.232  Sum_probs=146.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCC-----cccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-----PLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~d~vi~~a~~  107 (297)
                      .+.++.|++||.|+++++...+.+ ++|..+.|+..  ++.+..+.  ..++++++|...     ..+.++..++.+++.
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv-~svgilsen~~--k~~l~sw~--~~vswh~gnsfssn~~k~~l~g~t~v~e~~gg  127 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVV-HSVGILSENEN--KQTLSSWP--TYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGG  127 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhc-eeeeEeecccC--cchhhCCC--cccchhhccccccCcchhhhcCCcccHHHhcC
Confidence            568999999999999999999999 99999999754  22222222  356666666643     344567777777764


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      .      .+.....++|-....+-.+++++.|+ +|+|+|... ||.              .+..++ .|-..|.++|..
T Consensus       128 f------gn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~--------------~~~i~r-GY~~gKR~AE~E  185 (283)
T KOG4288|consen  128 F------GNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGL--------------PPLIPR-GYIEGKREAEAE  185 (283)
T ss_pred             c------cchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCC--------------CCccch-hhhccchHHHHH
Confidence            3      33445567888888999999999999 899999754 221              133343 799999999987


Q ss_pred             HHHHHHHhCCcEEEEeeccccCCCCCCCCh---hHHHHHHHHHHcCC-----CeEEecCCceeEeeeeHHHHHHHHHHHH
Q 022414          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDG---RVVSNFIAQAIRGE-----PLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (297)
Q Consensus       187 ~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~v~Dva~~~~~~~  258 (297)
                      +..   ...++-+++|||++||.+.-....   ..+...+.......     .+++  -+.-..+.+.+++||.+.+.++
T Consensus       186 ll~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~--lg~l~~ppvnve~VA~aal~ai  260 (283)
T KOG4288|consen  186 LLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPL--LGPLLAPPVNVESVALAALKAI  260 (283)
T ss_pred             HHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcc--cccccCCCcCHHHHHHHHHHhc
Confidence            755   345778899999999985321111   12223333332222     2333  2455678999999999999999


Q ss_pred             hcCC-CccEEecCCCcccHHHHHHHHHH
Q 022414          259 EGEN-TGPINIGNPGEFTMLELAENVKE  285 (297)
Q Consensus       259 ~~~~-~~~~~i~~~~~~s~~e~~~~i~~  285 (297)
                      ++|. .|        .++..|+.+.-++
T Consensus       261 ~dp~f~G--------vv~i~eI~~~a~k  280 (283)
T KOG4288|consen  261 EDPDFKG--------VVTIEEIKKAAHK  280 (283)
T ss_pred             cCCCcCc--------eeeHHHHHHHHHH
Confidence            9986 44        4555666555443

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.48  E-value=3.1e-12  Score=108.84  Aligned_cols=201  Identities=16%  Similarity=0.128  Sum_probs=121.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc----------ccCCcC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP----------LLIEVD   99 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----------~~~~~d   99 (297)
                      ...++|+|+||||.+|+-+++.|+++| +.|.++.|+.......+...........+..|....          ......
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrg-f~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRG-FSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCC-CeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence            346899999999999999999999999 999999997654443322111112222333332221          111244


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC---CCh
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV---RSC  175 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~---~~~  175 (297)
                      +++-|+|...  ... +...-+++...++.+++++|+..|+ |++++|+++.-..+             .+++.   ...
T Consensus       156 ~v~~~~ggrp--~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~-------------~~~~~~~~~~~  219 (411)
T KOG1203|consen  156 IVIKGAGGRP--EEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFN-------------QPPNILLLNGL  219 (411)
T ss_pred             eEEecccCCC--Ccc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccC-------------CCchhhhhhhh
Confidence            5666655322  111 2223335678899999999999999 89999987653211             11111   223


Q ss_pred             HHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHH
Q 022414          176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  255 (297)
                      +..+|..+|+++    ++++++++|+|++...-......     ...    ....+...  ..+..--.+.-.|+|+.++
T Consensus       220 ~~~~k~~~e~~~----~~Sgl~ytiIR~g~~~~~~~~~~-----~~~----~~~~~~~~--~~~~~~~~i~r~~vael~~  284 (411)
T KOG1203|consen  220 VLKAKLKAEKFL----QDSGLPYTIIRPGGLEQDTGGQR-----EVV----VDDEKELL--TVDGGAYSISRLDVAELVA  284 (411)
T ss_pred             hhHHHHhHHHHH----HhcCCCcEEEeccccccCCCCcc-----eec----ccCccccc--cccccceeeehhhHHHHHH
Confidence            557778888776    46799999999986654331110     000    01111111  1111113677889999999


Q ss_pred             HHHhcCC
Q 022414          256 RLMEGEN  262 (297)
Q Consensus       256 ~~~~~~~  262 (297)
                      .++.++.
T Consensus       285 ~all~~~  291 (411)
T KOG1203|consen  285 KALLNEA  291 (411)
T ss_pred             HHHhhhh
Confidence            9998876

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.46  E-value=1.8e-12  Score=98.39  Aligned_cols=160  Identities=19%  Similarity=0.199  Sum_probs=117.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ...+.+||||||+..||.++++.|.+.| .+|++..|+.    +.+.+.. ..+.+.-..+|+.|..            .
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elg-N~VIi~gR~e----~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELG-NTVIICGRNE----ERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhC-CEEEEecCcH----HHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhC
Confidence            3457899999999999999999999999 9999999954    3333322 2357778888988763            2


Q ss_pred             CCcCEEEEccCCCCCcccc------cChhhhHHHhHHHHHHHHHHH----HHcC-CeEEEEecceeecCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYK------YNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~------~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      ...+++|||||+.......      ++..+.+.+|+.++..+..+.    .++. .-+|.+||.-.+             
T Consensus        77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLaf-------------  143 (245)
T COG3967          77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAF-------------  143 (245)
T ss_pred             CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecccccc-------------
Confidence            3599999999987643322      223456788999888877665    3343 369999998766             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCC
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGP  209 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~  209 (297)
                         .|......|..+|++.+.+-..+.++   .++.++-+-|+.|-.+
T Consensus       144 ---vPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         144 ---VPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ---CcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence               34444556999999999886665544   4688888888888765

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.46  E-value=8.4e-13  Score=101.80  Aligned_cols=209  Identities=20%  Similarity=0.181  Sum_probs=137.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc--cchhhhcCCCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWIGHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+|++++||+.|.||.++.++|+++| ..+.++..+.+..+  .++....+...+-++++|+++..            +
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kg-ik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKG-IKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcC-chheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            458999999999999999999999999 65655555433321  23444455668889999999852            2


Q ss_pred             CCcCEEEEccCCCCCcccccChhhhHHHhHHHH----HHHHHHHHH-cCC---eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGT----LNMLGLAKR-VGA---RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~----~~l~~~~~~-~~~---r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ..+|++||.||...    +.+.+.++.+|+.+.    ...+.+..+ .|-   -+|..||...+                
T Consensus        82 g~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL----------------  141 (261)
T KOG4169|consen   82 GTIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL----------------  141 (261)
T ss_pred             CceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc----------------
Confidence            35999999999865    566788888888764    555666644 332   58889997654                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHH-----HHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC----C
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDY-----HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP----G  238 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~-----~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  238 (297)
                      +|.+-...|+.+|...-.+-+++     .+++|+++..++|+++-..        ....+-.+   +.-+.. ++    .
T Consensus       142 ~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~--------l~~~~~~~---~~~~e~-~~~~~~~  209 (261)
T KOG4169|consen  142 DPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD--------LAENIDAS---GGYLEY-SDSIKEA  209 (261)
T ss_pred             CccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH--------HHHHHHhc---CCcccc-cHHHHHH
Confidence            45555677999998766665553     3556999999999654321        11111100   000000 00    0


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCCCccE-EecCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGENTGPI-NIGNP  271 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~-~i~~~  271 (297)
                      -...+.-...++|+.++.+++.+.+|.. -+..+
T Consensus       210 l~~~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~g  243 (261)
T KOG4169|consen  210 LERAPKQSPACCAINIVNAIEYPKNGAIWKVDSG  243 (261)
T ss_pred             HHHcccCCHHHHHHHHHHHHhhccCCcEEEEecC
Confidence            0011234678999999999999887754 44443

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.43  E-value=9.1e-12  Score=102.50  Aligned_cols=162  Identities=20%  Similarity=0.153  Sum_probs=116.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhhcC--C-CceEEEecccCC-cc----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG--H-PRFELIRHDVTE-PL----------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~--~-~~~~~~~~Dl~~-~~----------   94 (297)
                      ..+|+|+||||++.||.++++.|.+.| +.|+++.|..... .+.......  . ..+.+..+|+++ ..          
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREG-ARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            457999999999999999999999999 9988888764431 111111111  1 256777899987 41          


Q ss_pred             --cCCcCEEEEccCCCCCc-c----cccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPI-F----YKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                        ..++|+++|+||..... .    ..+..+..+++|+.+...+.+++.+.-.  ++|++||.... ..           
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~-----------  149 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG-----------  149 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC-----------
Confidence              22499999999975421 1    2355677889999988888875544444  89999998753 21           


Q ss_pred             CCCCCCC-CChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCC
Q 022414          166 NVNPIGV-RSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGP  209 (297)
Q Consensus       166 ~~~~~~~-~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~  209 (297)
                           .+ ...|+.+|.+.+.+.+.+..+   .++.+..+.||.+-.+
T Consensus       150 -----~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         150 -----PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence                 11 367999999999998887754   5799999999955543

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.39  E-value=1.7e-11  Score=99.54  Aligned_cols=157  Identities=20%  Similarity=0.153  Sum_probs=119.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------------cC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------------LI   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------------~~   96 (297)
                      .+|-|+|||.-...|..+++.|.++| +.|.+-...+. ..+.+......+....++.|++++.              ..
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~G-f~V~Agcl~~~-gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKG-FRVFAGCLTEE-GAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcC-CEEEEEeecCc-hHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            35779999999999999999999999 99988884332 2333444443567888899999862              22


Q ss_pred             CcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHH----HHcCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +.=.+|||||+.....     .-+++...+++|..++..+.++.    +++.-|+|++||.+.  .              
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R--------------  169 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--R--------------  169 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--C--------------
Confidence            5778999999554322     23557778999999988887776    445559999999764  1              


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeecc
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFN  205 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~  205 (297)
                      .+.+...+|..||.+.|.+...+.++   .|+.+.++-||.
T Consensus       170 ~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~  210 (322)
T KOG1610|consen  170 VALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGF  210 (322)
T ss_pred             ccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence            23444577999999999998777655   689999999993

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.39  E-value=1.6e-12  Score=99.13  Aligned_cols=158  Identities=17%  Similarity=0.155  Sum_probs=115.5

Q ss_pred             ccCCCEEEEEcCC-chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-------------
Q 022414           29 FQSNMRILVTGGA-GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------------   94 (297)
Q Consensus        29 ~~~~~~ilItGat-G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-------------   94 (297)
                      ..+.++|+|||.+ |.||.+|+++|.++| +.|++..|....    +..+..+.++.....|++++.             
T Consensus         4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G-~~V~AtaR~~e~----M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    4 QSQPKKVLITGCSSGGIGYALAKEFARNG-YLVYATARRLEP----MAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             ccCCCeEEEeecCCcchhHHHHHHHHhCC-eEEEEEccccch----HhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCC
Confidence            3456889998864 999999999999999 999999995433    233333456777788887752             


Q ss_pred             cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc----CCeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .-..|+++|+||..-...    .....+.++++|+.+..++.++....    .-++|+++|...+               
T Consensus        79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~---------------  143 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV---------------  143 (289)
T ss_pred             CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE---------------
Confidence            225999999999542211    23446788999999998888887653    3379999999887               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeecccc
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTY  207 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~  207 (297)
                       -|.+..+.|..+|++...+.+.+.-+   .|++++.+-+|.|-
T Consensus       144 -vpfpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~  186 (289)
T KOG1209|consen  144 -VPFPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVA  186 (289)
T ss_pred             -eccchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEeccccee
Confidence             35555678999999999887665422   46777777776554

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.38  E-value=7.6e-11  Score=98.90  Aligned_cols=215  Identities=11%  Similarity=0.006  Sum_probs=128.9

Q ss_pred             ccCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCC--------CCCccc--hhhhcC---------------CC
Q 022414           29 FQSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYF--------TGSKDN--LRKWIG---------------HP   81 (297)
Q Consensus        29 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~--------~~~~~~--~~~~~~---------------~~   81 (297)
                      ...+|+++|||++  ..||+++++.|.++| .+|++.++..        ......  ......               ..
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~G-a~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~   83 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAG-ATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD   83 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCC-CEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence            4468999999995  899999999999999 9998876431        000000  000000               00


Q ss_pred             ceEEEecccCC---------c-----------ccCCcCEEEEccCCCC--Ccc----cccChhhhHHHhHHHHHHHHHHH
Q 022414           82 RFELIRHDVTE---------P-----------LLIEVDQIYHLACPAS--PIF----YKYNPVKTIKTNVIGTLNMLGLA  135 (297)
Q Consensus        82 ~~~~~~~Dl~~---------~-----------~~~~~d~vi~~a~~~~--~~~----~~~~~~~~~~~n~~~~~~l~~~~  135 (297)
                      ..+-+..|+.+         .           ...++|++|||||...  ...    ..+++...+++|+.+...+++++
T Consensus        84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~  163 (299)
T PRK06300         84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF  163 (299)
T ss_pred             CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            11111111111         0           1235999999998532  111    23456778899999999998888


Q ss_pred             HHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCC-ChHHHhHHHHHHHHHHHHHH----hCCcEEEEeecccc
Q 022414          136 KRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTY  207 (297)
Q Consensus       136 ~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v~  207 (297)
                      .+.   +-++|.+||.....                +.... ..|+.+|.+.+.+.+.++.+    .+++++.+.||.+-
T Consensus       164 ~p~m~~~G~ii~iss~~~~~----------------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~  227 (299)
T PRK06300        164 GPIMNPGGSTISLTYLASMR----------------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLA  227 (299)
T ss_pred             HHHhhcCCeEEEEeehhhcC----------------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCcc
Confidence            553   23688888765421                11111 26999999999999988865    27999999999886


Q ss_pred             CCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       208 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      .+.....  ..............++         ..+...+|+|+++++++....   .| .+.+.++
T Consensus       228 T~~~~~~--~~~~~~~~~~~~~~p~---------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        228 SRAGKAI--GFIERMVDYYQDWAPL---------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             Chhhhcc--cccHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            6532100  0001111111111111         135678999999999887543   34 4555543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.35  E-value=1.6e-11  Score=100.48  Aligned_cols=188  Identities=14%  Similarity=0.108  Sum_probs=122.3

Q ss_pred             HHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc---------CCcCEEEEccCCCCCcccccChh
Q 022414           48 LVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIYHLACPASPIFYKYNPV  118 (297)
Q Consensus        48 l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---------~~~d~vi~~a~~~~~~~~~~~~~  118 (297)
                      +++.|+++| ++|++++|+....    .      ...++++|+++...         .++|++||+||...    ..++.
T Consensus         1 ~a~~l~~~G-~~Vv~~~r~~~~~----~------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~~   65 (241)
T PRK12428          1 TARLLRFLG-ARVIGVDRREPGM----T------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPVE   65 (241)
T ss_pred             ChHHHHhCC-CEEEEEeCCcchh----h------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCHH
Confidence            478899999 9999999864321    0      13457888887521         25899999998653    24577


Q ss_pred             hhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCC-----------CCCCCCCCCCChHHHhHHHHH
Q 022414          119 KTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY-----------WGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       119 ~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~-----------~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      ..+++|+.++..+++++.+.   +.++|++||...++.....+..+..           +....+......|+.+|.+.+
T Consensus        66 ~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  145 (241)
T PRK12428         66 LVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALI  145 (241)
T ss_pred             HhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHH
Confidence            88999999999999998653   2489999999887532211111100           000023445578999999999


Q ss_pred             HHHHHHH-H---HhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhc
Q 022414          185 TLMFDYH-R---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       185 ~~~~~~~-~---~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                      .+.+.++ .   ..+++++.++||.+.++.....    ..............+       ...+...+|+|+++++++..
T Consensus       146 ~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~----~~~~~~~~~~~~~~~-------~~~~~~pe~va~~~~~l~s~  214 (241)
T PRK12428        146 LWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDF----RSMLGQERVDSDAKR-------MGRPATADEQAAVLVFLCSD  214 (241)
T ss_pred             HHHHHHHHHhhhccCeEEEEeecCCccCcccccc----hhhhhhHhhhhcccc-------cCCCCCHHHHHHHHHHHcCh
Confidence            9988877 3   3479999999999988753110    000000000000001       12356789999999998865


Q ss_pred             C
Q 022414          261 E  261 (297)
Q Consensus       261 ~  261 (297)
                      .
T Consensus       215 ~  215 (241)
T PRK12428        215 A  215 (241)
T ss_pred             h
Confidence            4

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.33  E-value=5.2e-11  Score=96.57  Aligned_cols=200  Identities=20%  Similarity=0.174  Sum_probs=136.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc--------c----CC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL--------L----IE   97 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~--------~----~~   97 (297)
                      .+|+|||++..+|..++.++..+| ..|+++.|+.++..+..+.+   .+...+.+..+|+.|..        +    ..
T Consensus        34 ~hi~itggS~glgl~la~e~~~~g-a~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREG-ADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHcc-CceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            799999999999999999999999 99999999866544433332   22223668888986541        1    25


Q ss_pred             cCEEEEccCCCCCccccc----ChhhhHHHhHHHHHHHHHHHHHc----C-C-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFYKY----NPVKTIKTNVIGTLNMLGLAKRV----G-A-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~----~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +|.+|+|||...+..+.+    +.+..+++|+.++.++++++.+.    . . +++.+||....                
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~----------------  176 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM----------------  176 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh----------------
Confidence            999999999877765443    35567899999999999887442    2 2 77888776542                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      -+....+.|..+|.+...+.....++   +++.+...-|+.+-.|+-..+           .+..........  ..-+.
T Consensus       177 ~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E-----------n~tkP~~t~ii~--g~ss~  243 (331)
T KOG1210|consen  177 LGIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE-----------NKTKPEETKIIE--GGSSV  243 (331)
T ss_pred             cCcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc-----------cccCchheeeec--CCCCC
Confidence            13334466888998888777666655   467777777877666653221           111111111111  12245


Q ss_pred             eeHHHHHHHHHHHHhcCC
Q 022414          245 CYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~  262 (297)
                      +..+++|.+++.-+.++.
T Consensus       244 ~~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  244 IKCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             cCHHHHHHHHHhHHhhcC
Confidence            788999999887777643

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.32  E-value=7e-11  Score=91.30  Aligned_cols=165  Identities=16%  Similarity=0.057  Sum_probs=111.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecCCCCCccchhhh-cCCCceEEEecccCCcc--------------c
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKW-IGHPRFELIRHDVTEPL--------------L   95 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~--------------~   95 (297)
                      .+.++||||+..||..|+++|++.. ...+++..|+.....+.+... ...++++.++.|+++..              .
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            3669999999999999999999874 244455666444322223222 23578999999998642              3


Q ss_pred             CCcCEEEEccCCCCCcccc-----cChhhhHHHhHHHHHHHHHHH-------HHc------CC---eEEEEecceeecCC
Q 022414           96 IEVDQIYHLACPASPIFYK-----YNPVKTIKTNVIGTLNMLGLA-------KRV------GA---RILLTSTSEVYGDP  154 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~-------~~~------~~---r~v~~Ss~~~~~~~  154 (297)
                      .+.+.++++||........     ....+++++|..++..+.+++       +..      .+   .+|++||.+.--  
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~--  160 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI--  160 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc--
Confidence            4799999999976543322     224467888988877666554       111      13   378888876420  


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCC
Q 022414          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGP  209 (297)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~  209 (297)
                            ..     ....+...|..||.+.-.+.+++..+   .++-++.+.||+|-..
T Consensus       161 ------~~-----~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TD  207 (249)
T KOG1611|consen  161 ------GG-----FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTD  207 (249)
T ss_pred             ------CC-----CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcC
Confidence                  00     23445678999999999998887755   3577788888888654

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.30  E-value=5.1e-12  Score=93.30  Aligned_cols=198  Identities=19%  Similarity=0.184  Sum_probs=141.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CC-ceEEEecccCCccc--------CCcC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HP-RFELIRHDVTEPLL--------IEVD   99 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~--------~~~d   99 (297)
                      ..++.|++||+.-.||+++++.|.+.| ..|+++.|+.    +.+..+.. .+ .+..+++|+.+...        ...|
T Consensus         5 laG~~vlvTgagaGIG~~~v~~La~aG-A~ViAvaR~~----a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pid   79 (245)
T KOG1207|consen    5 LAGVIVLVTGAGAGIGKEIVLSLAKAG-AQVIAVARNE----ANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPID   79 (245)
T ss_pred             ccceEEEeecccccccHHHHHHHHhcC-CEEEEEecCH----HHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchh
Confidence            357899999999999999999999999 9999999953    33333322 22 37889999987532        2489


Q ss_pred             EEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cCC--eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VGA--RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus       100 ~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      .++|+||......+    .++++..+++|+.+...+.+...+    .++  -++.+||.+..                .+
T Consensus        80 gLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~----------------R~  143 (245)
T KOG1207|consen   80 GLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI----------------RP  143 (245)
T ss_pred             hhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc----------------cc
Confidence            99999997654332    344566778999998888887544    333  48999997753                35


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCC---CCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRM---NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      ....+.|..+|.+.+..-+.++-+.   ++++..+.|..++....   +.++     .--..++...++         ..
T Consensus       144 ~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP-----~K~k~mL~riPl---------~r  209 (245)
T KOG1207|consen  144 LDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDP-----DKKKKMLDRIPL---------KR  209 (245)
T ss_pred             cCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCc-----hhccchhhhCch---------hh
Confidence            5556889999999999988888764   48888888988875431   1111     111112222111         24


Q ss_pred             eeeHHHHHHHHHHHHhcCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~  262 (297)
                      |.-++.|++++.+++...+
T Consensus       210 FaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  210 FAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             hhHHHHHHhhheeeeecCc
Confidence            7889999999999998765

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.20  E-value=4.9e-10  Score=87.31  Aligned_cols=153  Identities=21%  Similarity=0.230  Sum_probs=101.5

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc--c-chhhhcC-CCceEEEecccCCcc------------cCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--D-NLRKWIG-HPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~-~~~~~~~-~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      +++|||++|.||..+++.|.+++..+|+++.|+.....  . .+..+.. ...+.++++|++|..            ...
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            58999999999999999999998679999999832221  1 2222211 246889999999862            135


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEeccee-ecCCCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV-YGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      ++.|||+||......    ..++....+...+.+..+|.++...... .||.+||... +|..                 
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~-----------------  144 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP-----------------  144 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T-----------------
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc-----------------
Confidence            899999999765432    2233556678889999999999988777 6788888875 4322                 


Q ss_pred             CCChHHHhHHHHHHHHHHHHHHhCCcEEEEeec
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF  204 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~  204 (297)
                      ....|..+....+.+.+.... .+.++..+.-+
T Consensus       145 gq~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg  176 (181)
T PF08659_consen  145 GQSAYAAANAFLDALARQRRS-RGLPAVSINWG  176 (181)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-
T ss_pred             chHhHHHHHHHHHHHHHHHHh-CCCCEEEEEcc
Confidence            225699999999988776654 47887777653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.16  E-value=8.4e-10  Score=113.84  Aligned_cols=165  Identities=16%  Similarity=0.073  Sum_probs=119.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC---------------------------------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS---------------------------------------   70 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~---------------------------------------   70 (297)
                      .++++++||||++.||.++++.|.+++..+|+++.|+....                                       
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            35799999999999999999999998328999999972100                                       


Q ss_pred             ----ccc----hhhhcC-CCceEEEecccCCccc-----------CCcCEEEEccCCCCCcc----cccChhhhHHHhHH
Q 022414           71 ----KDN----LRKWIG-HPRFELIRHDVTEPLL-----------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVI  126 (297)
Q Consensus        71 ----~~~----~~~~~~-~~~~~~~~~Dl~~~~~-----------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~  126 (297)
                          ..+    +..+.. ...+.++.+|++|...           .++|.|||+||......    ..+++...+++|+.
T Consensus      2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence                000    000000 1357788999998621           25899999999754322    34557778999999


Q ss_pred             HHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh-CCcEEEEeec
Q 022414          127 GTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIARIF  204 (297)
Q Consensus       127 ~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ivrp~  204 (297)
                      +..++++++..... ++|++||...+..                ......|..+|.....+.+.+..+. +++++.+.||
T Consensus      2155 G~~~Ll~al~~~~~~~IV~~SSvag~~G----------------~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG 2218 (2582)
T TIGR02813      2155 GLLSLLAALNAENIKLLALFSSAAGFYG----------------NTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWG 2218 (2582)
T ss_pred             HHHHHHHHHHHhCCCeEEEEechhhcCC----------------CCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECC
Confidence            99999999987665 7899999875321                1123569999999998888777664 5788888887


Q ss_pred             cccCCC
Q 022414          205 NTYGPR  210 (297)
Q Consensus       205 ~v~G~~  210 (297)
                      .+-|+.
T Consensus      2219 ~wdtgm 2224 (2582)
T TIGR02813      2219 PWDGGM 2224 (2582)
T ss_pred             eecCCc
Confidence            765543

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.15  E-value=3.5e-10  Score=91.92  Aligned_cols=163  Identities=13%  Similarity=0.089  Sum_probs=115.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC--CceEEEecccCCcc-----------cCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH--PRFELIRHDVTEPL-----------LIEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~-----------~~~~   98 (297)
                      +.-+.|||||..||++.+++|.++| .+|++++|+..+......++.++  -.+..+..|+++..           ...+
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG-~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRG-FNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            4779999999999999999999999 99999999765443322222222  34778889998664           2247


Q ss_pred             CEEEEccCCCC--Cccccc----ChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPAS--PIFYKY----NPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        99 d~vi~~a~~~~--~~~~~~----~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      -++|||+|...  +..+.+    ...+.+.+|+.++..+.+....    .+. -++++||....                
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~----------------  191 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL----------------  191 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc----------------
Confidence            78999999765  222222    2344566788776666555522    233 58889887642                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCC
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRM  211 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~  211 (297)
                      .|.+-.+.|..+|...+.+.+.+.+++   ++.+..+-|..|-+...
T Consensus       192 ~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~  238 (312)
T KOG1014|consen  192 IPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA  238 (312)
T ss_pred             ccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence            345556789999999998887776653   68888888888877654

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.01  E-value=4.9e-09  Score=88.21  Aligned_cols=170  Identities=13%  Similarity=0.019  Sum_probs=111.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc--chhhhcCCCceEEEecccCC-----cccCCcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD--NLRKWIGHPRFELIRHDVTE-----PLLIEVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~Dl~~-----~~~~~~d~v  101 (297)
                      .+++||.|+|++|.||+.++..|..++. .+++++++.. ...+  ++....  ....  ..+.++     ..+.++|+|
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~-~~g~a~Dl~~~~--~~~~--v~~~td~~~~~~~l~gaDvV   80 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG-APGVAADLSHID--TPAK--VTGYADGELWEKALRGADLV   80 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC-CcccccchhhcC--cCce--EEEecCCCchHHHhCCCCEE
Confidence            4578999999999999999999986653 6899999821 1111  111111  1222  223222     467799999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCC--CCCCCCCCCCCCCCCCChHHH
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVH--PQDESYWGNVNPIGVRSCYDE  178 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~--~~~e~~~~~~~~~~~~~~Y~~  178 (297)
                      |+++|...  ....+..+.+..|+....++++++++.+. ++|+++|..+-....-.  ...+.     ..++|...||.
T Consensus        81 VitaG~~~--~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~-----sg~p~~~viG~  153 (321)
T PTZ00325         81 LICAGVPR--KPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKA-----GVYDPRKLFGV  153 (321)
T ss_pred             EECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhc-----cCCChhheeec
Confidence            99998643  23356678889999999999999999998 79999887652211000  00111     35556667877


Q ss_pred             hHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCC
Q 022414          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN  212 (297)
Q Consensus       179 sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~  212 (297)
                      +-...-++-...++..+++..-++ +.|+|...+
T Consensus       154 g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        154 TTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             hhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            755555555555666677777777 777887643

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.95  E-value=2.1e-09  Score=83.31  Aligned_cols=202  Identities=15%  Similarity=0.086  Sum_probs=124.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeE--EEEecCCCCCccchhhhcCCCceEEEecccCCc------------ccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEV--IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------------LLIE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v--~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------------~~~~   97 (297)
                      .+-|+|||+|..||..++..+.+.+ .+.  .+..|..... +.+..... .......+|++..            ...+
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed-~e~~r~g~~r~~a~~-~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAED-DEALRYGVARLLAEL-EGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcc-hHHHHHhhhcccccc-cceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            4669999999999999999998887 433  3333322221 11110011 1122223333332            1125


Q ss_pred             cCEEEEccCCCCCcc-------cccChhhhHHHhHHHHHHHHHHHH----HcCC--eEEEEecceeecCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-------YKYNPVKTIKTNVIGTLNMLGLAK----RVGA--RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      -|.+|||||...+..       ....++.+++.|+.+...+...+-    +...  .+|++||.+..             
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav-------------  149 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV-------------  149 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh-------------
Confidence            899999999766533       234467788999998877766553    3332  48889887754             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCCh--hHHHHHHHHHHcCCCeEEecCCce
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                         .|+..+..|..+|++.+.+++.++.+.  ++.+..++||.+-.+.......  +.-+..+...++-+..        
T Consensus       150 ---~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~--------  218 (253)
T KOG1204|consen  150 ---RPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES--------  218 (253)
T ss_pred             ---ccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc--------
Confidence               577788999999999999999988664  6888889998776554322111  1112222222221111        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~  261 (297)
                       -..+...+-|+.+..++++.
T Consensus       219 -~~ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  219 -GQLLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             -CCcCChhhHHHHHHHHHHhc
Confidence             12455667788888888875

>PRK06720 hypothetical protein; Provisional

Probab=98.90  E-value=2.1e-08  Score=76.95  Aligned_cols=82  Identities=17%  Similarity=0.133  Sum_probs=59.2

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      +...++.++||||+|.||.++++.|.+.| ++|++++|+.....+....+.. ......+.+|+++..            
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQG-AKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            33467999999999999999999999999 9999999864322111111111 134667889998752            


Q ss_pred             cCCcCEEEEccCCCCC
Q 022414           95 LIEVDQIYHLACPASP  110 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~  110 (297)
                      ..++|++||+||....
T Consensus        91 ~G~iDilVnnAG~~~~  106 (169)
T PRK06720         91 FSRIDMLFQNAGLYKI  106 (169)
T ss_pred             cCCCCEEEECCCcCCC
Confidence            2369999999997653

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.86  E-value=9.9e-09  Score=79.20  Aligned_cols=95  Identities=14%  Similarity=0.077  Sum_probs=67.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CCcCE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVDQ  100 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~~d~  100 (297)
                      |+++|||||||+|. +++.|.+.| ++|++++|+................+..+.+|+.|...            ..+|.
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G-~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKG-FHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCc-CEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            68999999998875 999999999 99999988643221111111112367788899988621            24677


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCe-----EEEEec
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-----ILLTST  147 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-----~v~~Ss  147 (297)
                      +|+.+                  ++.+..++..+|++.|++     |+|+=+
T Consensus        79 lv~~v------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~g  112 (177)
T PRK08309         79 AVAWI------------------HSSAKDALSVVCRELDGSSETYRLFHVLG  112 (177)
T ss_pred             EEEec------------------cccchhhHHHHHHHHccCCCCceEEEEeC
Confidence            77654                  455788999999999865     887644

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.78  E-value=1.7e-08  Score=74.84  Aligned_cols=208  Identities=19%  Similarity=0.217  Sum_probs=134.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      ++-..+|||+...+|++.++.|.+.| ..|.+++....+..+. .+.+. .++-+...|++++.            +-+.
T Consensus         8 kglvalvtggasglg~ataerlakqg-asv~lldlp~skg~~v-akelg-~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQG-ASVALLDLPQSKGADV-AKELG-GKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcC-ceEEEEeCCcccchHH-HHHhC-CceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            45678999999999999999999999 9999999876554443 33332 47888899998762            2359


Q ss_pred             CEEEEccCCCCCcc----------cccChhhhHHHhHHHHHHHHHHHHH---------cCCe--EEEEecceeecCCCCC
Q 022414           99 DQIYHLACPASPIF----------YKYNPVKTIKTNVIGTLNMLGLAKR---------VGAR--ILLTSTSEVYGDPLVH  157 (297)
Q Consensus        99 d~vi~~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~---------~~~r--~v~~Ss~~~~~~~~~~  157 (297)
                      |..+||||......          ..+++...+++|+.++.++++.-..         .|-|  +|...|...|.     
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd-----  159 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD-----  159 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec-----
Confidence            99999999754211          2344556678899999888766522         1224  45555555553     


Q ss_pred             CCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEE
Q 022414          158 PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV  234 (297)
Q Consensus       158 ~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (297)
                                 .......|..||...-.+..-.+++   .++++..+-|+..-.|-.     ..++.-+..++... +++
T Consensus       160 -----------gq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpll-----sslpekv~~fla~~-ipf  222 (260)
T KOG1199|consen  160 -----------GQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLL-----SSLPEKVKSFLAQL-IPF  222 (260)
T ss_pred             -----------CccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhh-----hhhhHHHHHHHHHh-CCC
Confidence                       2223356888887655443222222   278888888876544432     12233333333322 111


Q ss_pred             ecCCceeEeeeeHHHHHHHHHHHHhcCC-Cc-cEEec
Q 022414          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN-TG-PINIG  269 (297)
Q Consensus       235 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~-~~~i~  269 (297)
                      +      -.+.|..+.+..+-++++++. +| .+.+.
T Consensus       223 p------srlg~p~eyahlvqaiienp~lngevir~d  253 (260)
T KOG1199|consen  223 P------SRLGHPHEYAHLVQAIIENPYLNGEVIRFD  253 (260)
T ss_pred             c------hhcCChHHHHHHHHHHHhCcccCCeEEEec
Confidence            1      235688888999999999987 55 34443

>PLN00106 malate dehydrogenase

Probab=98.78  E-value=4.7e-08  Score=82.40  Aligned_cols=171  Identities=11%  Similarity=-0.020  Sum_probs=112.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcC-CCceEEEe-cccC--CcccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG-HPRFELIR-HDVT--EPLLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~Dl~--~~~~~~~d~vi~~a~  106 (297)
                      .+||.|+|++|.+|+.++..|..++. .++.+++.+. ...+.+ .+.. ........ .+.+  -..+.++|+||++||
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~a~-Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG   95 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGVAA-DVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG   95 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCeeEc-hhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence            47999999999999999999997763 5899999865 111111 1110 01111111 0111  135789999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      ....  ...+..+.+..|+...+++++.+++.+. .+++++|--+-+..   ++..........++|...||.++...++
T Consensus        96 ~~~~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~---~i~t~~~~~~s~~p~~~viG~~~LDs~R  170 (323)
T PLN00106         96 VPRK--PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTV---PIAAEVLKKAGVYDPKKLFGVTTLDVVR  170 (323)
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccH---HHHHHHHHHcCCCCcceEEEEecchHHH
Confidence            7543  3456788899999999999999999998 67777775432100   0000000111456667789989988888


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCC
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPR  210 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~  210 (297)
                      +-..+++..+++..-++ +.|+|..
T Consensus       171 l~~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        171 ANTFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHHHHHhCCChhheE-EEEEEeC
Confidence            88888888787766664 4556655

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.61  E-value=1.5e-07  Score=80.49  Aligned_cols=95  Identities=26%  Similarity=0.307  Sum_probs=71.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~  106 (297)
                      +|+|+|+|+ |++|+.+++.|++++..+|++.+|+..+..+....  ...+++..+.|..+.     ...+.|+|||++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~--~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL--IGGKVEALQVDAADVDALVALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh--ccccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence            589999998 99999999999999888999999964332221111  123788999999876     2347899999985


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                      +.                  ...+++++|.+.|+.++=+|-
T Consensus        78 ~~------------------~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          78 PF------------------VDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             ch------------------hhHHHHHHHHHhCCCEEEccc
Confidence            43                  234889999999987665543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.57  E-value=3.9e-07  Score=71.95  Aligned_cols=170  Identities=15%  Similarity=0.117  Sum_probs=111.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC----CeEEEEecCCCCCccchhhhc---C--CCceEEEecccCCcc--------
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK----NEVIVVDNYFTGSKDNLRKWI---G--HPRFELIRHDVTEPL--------   94 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~----~~v~~~~r~~~~~~~~~~~~~---~--~~~~~~~~~Dl~~~~--------   94 (297)
                      .|.++|||++..+|-+|+..|++..+    .++.+.+|+-.+.++..+.+.   .  ...+++++.|+++..        
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            46799999999999999999998863    356777776555554444432   2  336788999998752        


Q ss_pred             ----cCCcCEEEEccCCCCCcc-------------------------------cccChhhhHHHhHHHHHHHHHHHHHcC
Q 022414           95 ----LIEVDQIYHLACPASPIF-------------------------------YKYNPVKTIKTNVIGTLNMLGLAKRVG  139 (297)
Q Consensus        95 ----~~~~d~vi~~a~~~~~~~-------------------------------~~~~~~~~~~~n~~~~~~l~~~~~~~~  139 (297)
                          ....|.++-+||......                               ..++..+.++.|+.+..-+++.+...-
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence                236999999998653221                               123345678899999888777665532


Q ss_pred             ----C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccC
Q 022414          140 ----A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYG  208 (297)
Q Consensus       140 ----~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G  208 (297)
                          . ++|++||...-..+   ..-|| +   .......+|..||++.+.+-....++   .|+.--++.||....
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~---lsleD-~---q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt  232 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKN---LSLED-F---QHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTT  232 (341)
T ss_pred             hcCCCCeEEEEeeccccccc---CCHHH-H---hhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeec
Confidence                3 79999997652211   11122 1   22233355999999998776555433   356666777765543

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.55  E-value=1.7e-06  Score=73.34  Aligned_cols=163  Identities=11%  Similarity=0.065  Sum_probs=113.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC-C-----eEEEEecCCCCC-ccchhhhcCC------CceEEEecccCCcccCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK-N-----EVIVVDNYFTGS-KDNLRKWIGH------PRFELIRHDVTEPLLIEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~-~-----~v~~~~r~~~~~-~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~   98 (297)
                      .+||.|+|++|.+|..++..|+..+. .     ++.+++...... .......+..      ..+.....|  ...+.++
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~--~~~~~da   79 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDP--NVAFKDA   79 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCc--HHHhCCC
Confidence            37999999999999999999998774 2     689998853221 1111111110      122222111  2456789


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C--eEEEEecce-----eecCCCCCCCCCCCCCCCC-C
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTSTSE-----VYGDPLVHPQDESYWGNVN-P  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~v~~Ss~~-----~~~~~~~~~~~e~~~~~~~-~  169 (297)
                      |+||.+||...  ....+..+.+..|....+.+....++.+ -  .++.+|-..     +.-.             .. .
T Consensus        80 DivvitaG~~~--k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k-------------~sg~  144 (322)
T cd01338          80 DWALLVGAKPR--GPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMK-------------NAPD  144 (322)
T ss_pred             CEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHH-------------HcCC
Confidence            99999998653  2345677889999999999999998876 2  566665321     1100             02 2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCC
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM  211 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~  211 (297)
                      +++...|+.++...+++...+++..+++...+|...|||+..
T Consensus       145 ~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         145 IPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             CChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            455567989999999999999999999999999888999873

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.52  E-value=1.4e-06  Score=74.01  Aligned_cols=111  Identities=16%  Similarity=0.120  Sum_probs=73.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC------CeEEEEecCCCCC-ccchhhhcC------CCceEEEecccCCcccCCcC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK------NEVIVVDNYFTGS-KDNLRKWIG------HPRFELIRHDVTEPLLIEVD   99 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~------~~v~~~~r~~~~~-~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~d   99 (297)
                      .||+||||+|++|++++..|+..+.      .++++++++.... .+.....+.      ...+. ...|+ ...+.++|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~-~~~~~-~~~l~~aD   80 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVV-ATTDP-EEAFKDVD   80 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCce-ecCCH-HHHhCCCC
Confidence            6899999999999999999988552      4899999864211 111000000      00110 01111 23567899


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C--eEEEEec
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTST  147 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~v~~Ss  147 (297)
                      +|||+||....  ...+..+.+..|+.-...+....++.. -  .++.+|.
T Consensus        81 iVI~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          81 VAILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEEEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            99999997542  345668889999999999998888873 2  5666664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.44  E-value=2.3e-05  Score=61.36  Aligned_cols=212  Identities=14%  Similarity=0.103  Sum_probs=130.0

Q ss_pred             ccCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCC-ceEEEecccCCcc-----------
Q 022414           29 FQSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP-RFELIRHDVTEPL-----------   94 (297)
Q Consensus        29 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~-----------   94 (297)
                      ...+|++||+|-.  --|+..|++.|.+.| .++..+.... +.....+++.+.. .--++.||+.+..           
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~G-AeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQG-AELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcC-CEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            4578999999975  569999999999999 9998888764 2222333333222 2346789998752           


Q ss_pred             -cCCcCEEEEccCCCCCcccccC--------hhhhHHHhHHHHHHHHHHHHHc---CC---eEEEEecceeecCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIFYKYN--------PVKTIKTNVIGTLNMLGLAKRV---GA---RILLTSTSEVYGDPLVHPQ  159 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~~~~--------~~~~~~~n~~~~~~l~~~~~~~---~~---r~v~~Ss~~~~~~~~~~~~  159 (297)
                       ..+.|.++|+.++........+        +....++...+...++++|+..   |-   .+-|.+|.-+.        
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~v--------  152 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVV--------  152 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeec--------
Confidence             2269999999998763332222        2223344445556666666552   21   34455553332        


Q ss_pred             CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCCh--hHHHHHHHHHHcCCCeEE
Q 022414          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTV  234 (297)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~  234 (297)
                                 +..+..+.+|+..|.-++-++.+.   +++++.+--    ||-.+....  ..+..++.......++  
T Consensus       153 -----------PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISA----GPIrTLAasgI~~f~~~l~~~e~~aPl--  215 (259)
T COG0623         153 -----------PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISA----GPIRTLAASGIGDFRKMLKENEANAPL--  215 (259)
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecc----cchHHHHhhccccHHHHHHHHHhhCCc--
Confidence                       222568999999999988887664   466666554    443211111  1233444443343333  


Q ss_pred             ecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       235 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                             +..+..+||.+..++++..-.    +.+.|+.+|-.+
T Consensus       216 -------~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         216 -------RRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             -------cCCCCHHHhhhhHHHHhcchhcccccceEEEcCCcee
Confidence                   235678999998888887654    446777776443

>PRK05086 malate dehydrogenase; Provisional

Probab=98.42  E-value=3.5e-06  Score=71.19  Aligned_cols=113  Identities=19%  Similarity=0.079  Sum_probs=75.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHh-cCC-CeEEEEecCCCCCccchhhhcCCCceEEEec-ccCC--cccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLME-NEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRH-DVTE--PLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~-~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-Dl~~--~~~~~~d~vi~~a~~  107 (297)
                      |||+|+||||.+|++++..|.. .+. +++.+++|+.. .......+........+.+ +-.+  ..+.++|+||.++|.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~   79 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGV   79 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCC
Confidence            7999999999999999998855 231 68888888643 2111111111111112222 1122  356789999999986


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecc
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS  148 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~  148 (297)
                      ..  ....+..+.+..|......+++.+++.+. +++.+.|-
T Consensus        80 ~~--~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN  119 (312)
T PRK05086         80 AR--KPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN  119 (312)
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            43  23456778889999999999999999987 66666663

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.38  E-value=6.4e-06  Score=61.19  Aligned_cols=112  Identities=13%  Similarity=0.121  Sum_probs=76.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      |||.|+|++|.+|++++..|...+. .++++++++......   ++...............-....+.++|+|+.++|..
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~   80 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP   80 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence            7999999999999999999999874 689999986432111   111111111122211112233567899999999864


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      .  ....+..+.+..|....+.+++.+.+.+-  .++.+|
T Consensus        81 ~--~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   81 R--KPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             S--STTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             c--cccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            3  33456778889999999999999998874  455554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK09620 hypothetical protein; Provisional

Probab=98.38  E-value=1.4e-06  Score=70.09  Aligned_cols=76  Identities=20%  Similarity=0.426  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCC----------------chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEec--ccCC
Q 022414           31 SNMRILVTGGA----------------GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH--DVTE   92 (297)
Q Consensus        31 ~~~~ilItGat----------------G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~--Dl~~   92 (297)
                      .+|+|+||+|.                ||+|++|+++|+++| ++|+++++..........   ....+..+..  |+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G-a~V~li~g~~~~~~~~~~---~~~~~~~V~s~~d~~~   77 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG-AHVIYLHGYFAEKPNDIN---NQLELHPFEGIIDLQD   77 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC-CeEEEEeCCCcCCCcccC---CceeEEEEecHHHHHH
Confidence            57999999885                999999999999999 999998875322111111   0112333444  4432


Q ss_pred             c---cc--CCcCEEEEccCCCCC
Q 022414           93 P---LL--IEVDQIYHLACPASP  110 (297)
Q Consensus        93 ~---~~--~~~d~vi~~a~~~~~  110 (297)
                      .   ..  .++|+|||+|+....
T Consensus        78 ~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         78 KMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHhcccCCCEEEECccccce
Confidence            1   12  368999999998654

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.36  E-value=7e-06  Score=59.37  Aligned_cols=98  Identities=16%  Similarity=0.205  Sum_probs=61.0

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcccCCcCEEEEccCCCCCc
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~  111 (297)
                      ||.|+||||++|+.+++.|.++...++..+..+.......+.....  ....+..-.+.....+.++|+||.|.+     
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~-----   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALP-----   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SC-----
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCc-----
Confidence            6999999999999999999997656766655544322222222211  011122222222334578999999873     


Q ss_pred             ccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                                   -.....+...+.+.|+++|=.|+..
T Consensus        76 -------------~~~~~~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   76 -------------HGASKELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             -------------HHHHHHHHHHHHHTTSEEEESSSTT
T ss_pred             -------------hhHHHHHHHHHhhCCcEEEeCCHHH
Confidence                         1245677777788999877777754

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.35  E-value=4.8e-05  Score=65.15  Aligned_cols=77  Identities=16%  Similarity=0.114  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchhHHH--HHHHHHhcCCCeEEEEecCCCCCc-----------cchhhhcCC--CceEEEecccCCcc-
Q 022414           31 SNMRILVTGGAGFIGSH--LVDKLMENEKNEVIVVDNYFTGSK-----------DNLRKWIGH--PRFELIRHDVTEPL-   94 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~--l~~~L~~~g~~~v~~~~r~~~~~~-----------~~~~~~~~~--~~~~~~~~Dl~~~~-   94 (297)
                      .+|++||||+++.+|.+  +++.| +.| ..|+++++......           +.+.+....  ..+..+.+|+++.. 
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~G-A~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAG-ADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcC-CeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            36999999999999999  89999 999 88888875321111           122222222  23567889998752 


Q ss_pred             -----------cCCcCEEEEccCCCC
Q 022414           95 -----------LIEVDQIYHLACPAS  109 (297)
Q Consensus        95 -----------~~~~d~vi~~a~~~~  109 (297)
                                 .-++|++||++|...
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCC
Confidence                       235999999999763

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.26  E-value=1e-05  Score=70.02  Aligned_cols=105  Identities=16%  Similarity=0.173  Sum_probs=65.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEE-ecccCCcccCCcCEEEEccCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELI-RHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~-~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      .+.|||.|.||||++|+++++.|.++...++..+.+.....+ .+..... ....+.. ..++......++|+||.+.+.
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~-~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~  114 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQ-SFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH  114 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCC-CchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence            456899999999999999999999995589999887532211 1111100 0000110 111221224679999987642


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCC
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDP  154 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~  154 (297)
                      .                  ....++..+ +.|+++|-.|+.+-+.+.
T Consensus       115 ~------------------~s~~i~~~~-~~g~~VIDlSs~fRl~~~  142 (381)
T PLN02968        115 G------------------TTQEIIKAL-PKDLKIVDLSADFRLRDI  142 (381)
T ss_pred             H------------------HHHHHHHHH-hCCCEEEEcCchhccCCc
Confidence            1                  355666665 467899999998876543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.23  E-value=3.2e-06  Score=74.09  Aligned_cols=90  Identities=26%  Similarity=0.237  Sum_probs=61.0

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEccCCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLACPA  108 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~a~~~  108 (297)
                      |+|+|+ |++|+.+++.|.+++.. +|++.+|+.........+. ...++..++.|..+..     ..++|+||||+++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            799999 99999999999999744 8999999643322222211 3468999999998763     45799999999753


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEE
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL  144 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~  144 (297)
                                        ....++++|.+.|+++|=
T Consensus        79 ------------------~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   79 ------------------FGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             ------------------GHHHHHHHHHHHT-EEEE
T ss_pred             ------------------hhHHHHHHHHHhCCCeec
Confidence                              244777888888876665

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.22  E-value=4.4e-06  Score=67.39  Aligned_cols=64  Identities=19%  Similarity=0.378  Sum_probs=43.6

Q ss_pred             cCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCC-------cccCCcCEEEEccCCCC
Q 022414           39 GGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-------PLLIEVDQIYHLACPAS  109 (297)
Q Consensus        39 GatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-------~~~~~~d~vi~~a~~~~  109 (297)
                      .+|||+|++|++.|+++| ++|+++.|.......      ...++.++..+..+       ....++|+|||+||...
T Consensus        23 ~SSG~iG~aLA~~L~~~G-~~V~li~r~~~~~~~------~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAG-HEVTLVTTKTAVKPE------PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             ccchHHHHHHHHHHHhCC-CEEEEEECcccccCC------CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            457999999999999999 999999875321110      11245555443322       12346999999999765

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.17  E-value=1.5e-05  Score=68.26  Aligned_cols=97  Identities=20%  Similarity=0.190  Sum_probs=63.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC--CeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      +|+|+|.||||++|+++++.|.++++  .++.++.+....... +.  +  .+.+....|+.+....++|+||.+++.. 
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~-l~--~--~g~~i~v~d~~~~~~~~vDvVf~A~g~g-   74 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE-LS--F--KGKELKVEDLTTFDFSGVDIALFSAGGS-   74 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe-ee--e--CCceeEEeeCCHHHHcCCCEEEECCChH-
Confidence            47999999999999999999999762  356777665322211 11  1  1233444455544456899999887532 


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceee
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~  151 (297)
                                       ....++..+.+.|+++|=.|+..-+
T Consensus        75 -----------------~s~~~~~~~~~~G~~VIDlS~~~R~   99 (334)
T PRK14874         75 -----------------VSKKYAPKAAAAGAVVIDNSSAFRM   99 (334)
T ss_pred             -----------------HHHHHHHHHHhCCCEEEECCchhhc
Confidence                             3445556666678877767776533

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.16  E-value=1.4e-05  Score=65.33  Aligned_cols=89  Identities=17%  Similarity=0.196  Sum_probs=60.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-------ccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-------LLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------~~~~~d~vi~~a  105 (297)
                      |+|+|+||||. |+.|++.|.+.| ++|++..+....... +.    ..+...+..+..+.       ...++|+||+++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g-~~v~~s~~t~~~~~~-~~----~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt   73 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQG-IEILVTVTTSEGKHL-YP----IHQALTVHTGALDPQELREFLKRHSIDILVDAT   73 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCC-CeEEEEEccCCcccc-cc----ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence            78999999999 999999999999 999998886543221 11    11122222333332       223699999987


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEE
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v  143 (297)
                      .+.               ......++.++|++.|+.++
T Consensus        74 HPf---------------A~~is~~a~~a~~~~~ipyl   96 (256)
T TIGR00715        74 HPF---------------AAQITTNATAVCKELGIPYV   96 (256)
T ss_pred             CHH---------------HHHHHHHHHHHHHHhCCcEE
Confidence            432               23457788888888887444

This enzyme was found to be a monomer by gel filtration.

>cd00704 MDH Malate dehydrogenase

Probab=98.09  E-value=4.2e-05  Score=64.90  Aligned_cols=109  Identities=17%  Similarity=0.135  Sum_probs=73.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCC------eEEEEecCC--CCCccc---hhhhc-C-CCceEEEecccCCcccCCcCE
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYF--TGSKDN---LRKWI-G-HPRFELIRHDVTEPLLIEVDQ  100 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~------~v~~~~r~~--~~~~~~---~~~~~-~-~~~~~~~~~Dl~~~~~~~~d~  100 (297)
                      ||.|+||+|.+|+.++..|...+..      ++++++++.  ......   +.... . ....+. ..+ ....+.++|+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i-~~~-~~~~~~~aDi   79 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVI-TTD-PEEAFKDVDV   79 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEE-ecC-hHHHhCCCCE
Confidence            7999999999999999999876632      589998864  211111   11100 0 011221 111 2345678999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C--eEEEEe
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTS  146 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~v~~S  146 (297)
                      ||++||...  ....+..+.+..|....+.+...+++.. -  .++.+|
T Consensus        80 VVitAG~~~--~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          80 AILVGAFPR--KPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             EEEeCCCCC--CcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999998653  3456778889999999999999998884 4  555554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.02  E-value=9.4e-05  Score=62.59  Aligned_cols=112  Identities=14%  Similarity=0.091  Sum_probs=74.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCC--CCCccchhhhc----CCC-ceEEEe-cccCCcccCCcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF--TGSKDNLRKWI----GHP-RFELIR-HDVTEPLLIEVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~--~~~~~~~~~~~----~~~-~~~~~~-~Dl~~~~~~~~d~vi~  103 (297)
                      |||.|+|++|++|..++..|+..|. .+|++++|..  .........+.    ... ...+.- .|.  ..+.++|+||.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~--~~l~~aDiVii   78 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL--SDVAGSDIVII   78 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH--HHhCCCCEEEE
Confidence            7999999999999999999999983 3699999843  11111111110    111 112211 232  34789999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecc
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~  148 (297)
                      ++|...  ....+..+.+..|....+.+++.+.+.+-  +++.+++.
T Consensus        79 tag~p~--~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          79 TAGVPR--KEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             ecCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            998643  22344567788899999999998887754  66666653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.01  E-value=1.2e-05  Score=63.40  Aligned_cols=76  Identities=12%  Similarity=0.146  Sum_probs=51.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCc-----ccCCcCEEE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEP-----LLIEVDQIY  102 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~-----~~~~~d~vi  102 (297)
                      ...+++++|+||+|.+|+.+++.|.+.| .+|+++.|+..... .+...+. ..+......|..+.     ...++|+||
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g-~~V~l~~R~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi  102 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREG-ARVVLVGRDLERAQ-KAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF  102 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHH-HHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence            4567999999999999999999999999 89999998643221 2222111 12333444555442     345799999


Q ss_pred             EccC
Q 022414          103 HLAC  106 (297)
Q Consensus       103 ~~a~  106 (297)
                      ++..
T Consensus       103 ~at~  106 (194)
T cd01078         103 AAGA  106 (194)
T ss_pred             ECCC
Confidence            8764

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.01  E-value=5.2e-05  Score=65.37  Aligned_cols=98  Identities=12%  Similarity=0.213  Sum_probs=59.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--------CC--CceEEEecccCCcccCCcCEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--------GH--PRFELIRHDVTEPLLIEVDQI  101 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--------~~--~~~~~~~~Dl~~~~~~~~d~v  101 (297)
                      +++|+|+||||++|+++++.|.++...++.++.++.......+....        ..  ..+.+...|.  ....++|+|
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~DvV   80 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDP--EAVDDVDIV   80 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCH--HHhcCCCEE
Confidence            58999999999999999999998875688888554322221111110        00  1112211121  123478998


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      +.+...                +  ....+.+.+.+.|+++|-.|+..
T Consensus        81 f~a~p~----------------~--~s~~~~~~~~~~G~~vIDls~~f  110 (349)
T PRK08664         81 FSALPS----------------D--VAGEVEEEFAKAGKPVFSNASAH  110 (349)
T ss_pred             EEeCCh----------------h--HHHHHHHHHHHCCCEEEECCchh
Confidence            876531                1  23455577777899877777754

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.98  E-value=5.8e-05  Score=64.83  Aligned_cols=101  Identities=13%  Similarity=0.223  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCce-EEEecccCCcccCCcCEEEEccCCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRF-ELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~-~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      ++||+|+||||++|+.+++.|.++...+++++.+... ..+.+..... .... ....-++.+....++|+||.|...  
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~vD~Vf~alP~--   78 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSS-AGKPLSDVHPHLRGLVDLVLEPLDPEILAGADVVFLALPH--   78 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccc-cCcchHHhCcccccccCceeecCCHHHhcCCCEEEECCCc--
Confidence            5899999999999999999999875478877766321 2212222111 0000 111112222234579999987632  


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceee
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~  151 (297)
                                      .....++..+.+.|+++|=.|+..-+
T Consensus        79 ----------------~~~~~~v~~a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         79 ----------------GVSMDLAPQLLEAGVKVIDLSADFRL  104 (343)
T ss_pred             ----------------HHHHHHHHHHHhCCCEEEECCcccCC
Confidence                            13456666777788888888887655

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.97  E-value=0.00015  Score=61.51  Aligned_cols=112  Identities=13%  Similarity=0.172  Sum_probs=78.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhh---cC-CCceEEEecccCCcccCCcCEEEEc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKW---IG-HPRFELIRHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~~~Dl~~~~~~~~d~vi~~  104 (297)
                      ..++||.|+|+ |.+|..++..|...+. .++.+++++..........+   .. ..++.....|.  ..+.++|+||.+
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~--~~~~~adivIit   80 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDY--SDCKDADLVVIT   80 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCH--HHhCCCCEEEEe
Confidence            45689999998 9999999999999884 38999998654322221111   11 02333333332  357899999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ||...  ....+..+.+..|....+.+++.+++.+.  +++.+|
T Consensus        81 ag~~~--k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         81 AGAPQ--KPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             cCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            98643  33456778889999999999999988765  566555

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.96  E-value=5.5e-05  Score=64.44  Aligned_cols=97  Identities=16%  Similarity=0.179  Sum_probs=59.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC--CeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      +++|+|+||||++|+++++.|.++++  .++..+.... .....+.  +....+.+...|  ...+.++|++|.+++.. 
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~-~aG~~l~--~~~~~l~~~~~~--~~~~~~vD~vFla~p~~-   77 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSE-SAGHSVP--FAGKNLRVREVD--SFDFSQVQLAFFAAGAA-   77 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcc-cCCCeec--cCCcceEEeeCC--hHHhcCCCEEEEcCCHH-
Confidence            48999999999999999999997652  3444443322 1111111  111122222222  22346799999876311 


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceee
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~  151 (297)
                                       ....++..+.+.|+++|=.|+.+-+
T Consensus        78 -----------------~s~~~v~~~~~~G~~VIDlS~~fR~  102 (336)
T PRK05671         78 -----------------VSRSFAEKARAAGCSVIDLSGALPS  102 (336)
T ss_pred             -----------------HHHHHHHHHHHCCCeEEECchhhcC
Confidence                             2345777777889988888887754

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.96  E-value=0.00023  Score=59.96  Aligned_cols=112  Identities=16%  Similarity=0.037  Sum_probs=76.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCC-CceEEEe--ccc-CCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH-PRFELIR--HDV-TEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~--~Dl-~~~~~~~~d~vi~~a~~  107 (297)
                      |||.|+|++|.+|++++..|...+. .++.+++.+ ....+. ..+... .......  .|- .-..+.++|+||.+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~a-lDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~   78 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVA-ADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGV   78 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceee-hHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCC
Confidence            6999999999999999999988874 588999886 211111 111111 1112221  211 12457899999999986


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecc
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~  148 (297)
                      ..  ....+..+.++.|..-.+.+++..++.+-  .++.+|-.
T Consensus        79 ~~--k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNP  119 (310)
T cd01337          79 PR--KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNP  119 (310)
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence            43  34567888899999999999999988874  56666543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.95  E-value=3.1e-05  Score=69.40  Aligned_cols=77  Identities=21%  Similarity=0.192  Sum_probs=56.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+|+|+|+|+++ +|..+++.|++.| ++|++.++.....-+.....+...++.++..|..+....++|+||+++|..
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G-~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~~   79 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLG-AKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGVP   79 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence            3579999999888 9999999999999 999999886422111111122333677888888776556799999988753

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.93  E-value=6.6e-05  Score=54.47  Aligned_cols=97  Identities=21%  Similarity=0.343  Sum_probs=56.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCC-CccchhhhcCCCceE-EEecccCCcccCCcCEEEEccCCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTG-SKDNLRKWIGHPRFE-LIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~-~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      |||.|.|++|.+|+.+++.+.+....++.+. +|+... ............... .+..|+ +..+..+|++|.+.    
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l-~~~~~~~DVvIDfT----   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDL-EELLEEADVVIDFT----   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-H-HHHTTH-SEEEEES----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhH-HHhcccCCEEEEcC----
Confidence            6899999999999999999999543776554 443311 111222222111111 111223 22334499999876    


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecc
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~  148 (297)
                                    +-......++.|.++|+++|.-+|.
T Consensus        76 --------------~p~~~~~~~~~~~~~g~~~ViGTTG  100 (124)
T PF01113_consen   76 --------------NPDAVYDNLEYALKHGVPLVIGTTG  100 (124)
T ss_dssp             ---------------HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred             --------------ChHHhHHHHHHHHhCCCCEEEECCC
Confidence                          1235667888888999887765553

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.86  E-value=3.8e-05  Score=56.66  Aligned_cols=78  Identities=21%  Similarity=0.203  Sum_probs=56.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ...+++++|.|+ |.+|+.++..|.+.|..+|+++.|+..+. +.+.+.+....+..+..+-......++|+||++.+..
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra-~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERA-EALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSG   86 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHH-HHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCC
Confidence            346899999996 88999999999999966799999964332 3333334334566666655555567899999987543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.86  E-value=0.00015  Score=62.12  Aligned_cols=100  Identities=13%  Similarity=0.151  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC--CeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..++|+|.||||++|.++++.|.++++  .++..+....... +... .   .+.+....++....+.++|+||.+++..
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaG-k~~~-~---~~~~~~v~~~~~~~~~~~D~vf~a~p~~   80 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAG-KKVT-F---EGRDYTVEELTEDSFDGVDIALFSAGGS   80 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCC-Ceee-e---cCceeEEEeCCHHHHcCCCEEEECCCcH
Confidence            358999999999999999999998762  2444443321111 1111 0   1123333344334456899999887532


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecC
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~  153 (297)
                                        ....++..+.+.|+++|=.|+.+-+.+
T Consensus        81 ------------------~s~~~~~~~~~~g~~VIDlS~~fR~~~  107 (344)
T PLN02383         81 ------------------ISKKFGPIAVDKGAVVVDNSSAFRMEE  107 (344)
T ss_pred             ------------------HHHHHHHHHHhCCCEEEECCchhhcCC
Confidence                              244555566668888888888775443

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.85  E-value=1.7e-05  Score=65.97  Aligned_cols=75  Identities=15%  Similarity=0.190  Sum_probs=55.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHh----cCCCeEEEEecCCCCCccchhhhcCC-----CceEEEecccCCcc-----cCCcC
Q 022414           34 RILVTGGAGFIGSHLVDKLME----NEKNEVIVVDNYFTGSKDNLRKWIGH-----PRFELIRHDVTEPL-----LIEVD   99 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~----~g~~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~-----~~~~d   99 (297)
                      .++|.|||||.|..+++++.+    .+ ..+-+-.|+..+..+.++.....     ...-.+.+|..|++     ++.+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~-~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~   85 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEG-LSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR   85 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccC-ceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence            489999999999999999999    56 77777788766655555543221     12227788987764     45799


Q ss_pred             EEEEccCCCC
Q 022414          100 QIYHLACPAS  109 (297)
Q Consensus       100 ~vi~~a~~~~  109 (297)
                      +|+||+|+..
T Consensus        86 vivN~vGPyR   95 (423)
T KOG2733|consen   86 VIVNCVGPYR   95 (423)
T ss_pred             EEEeccccce
Confidence            9999999764

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.85  E-value=6.2e-05  Score=65.63  Aligned_cols=70  Identities=23%  Similarity=0.237  Sum_probs=51.2

Q ss_pred             cCCCEEEEEcC----------------CchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc
Q 022414           30 QSNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP   93 (297)
Q Consensus        30 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   93 (297)
                      ..+++|+||||                ||.+|.+++++|.++| .+|++++++....   .     ...+  ...|+.+.
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G-a~V~~v~~~~~~~---~-----~~~~--~~~dv~~~  254 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG-ADVTLVSGPVNLP---T-----PAGV--KRIDVESA  254 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC-CEEEEeCCCcccc---C-----CCCc--EEEccCCH
Confidence            46899999999                9999999999999999 9999998854211   0     0122  23444442


Q ss_pred             ---------ccCCcCEEEEccCCCCC
Q 022414           94 ---------LLIEVDQIYHLACPASP  110 (297)
Q Consensus        94 ---------~~~~~d~vi~~a~~~~~  110 (297)
                               ...++|++||+||....
T Consensus       255 ~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        255 QEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHHhcCCCCEEEEccccccc
Confidence                     23469999999997654

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.84  E-value=1.8e-05  Score=67.07  Aligned_cols=75  Identities=23%  Similarity=0.220  Sum_probs=49.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ...+++|+||||+|+||+.+++.|.++ |..+++++.|+.... ..+...+..  ...  .|+ +....++|+|+|+++.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl-~~La~el~~--~~i--~~l-~~~l~~aDiVv~~ts~  225 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERL-QELQAELGG--GKI--LSL-EEALPEADIVVWVASM  225 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHH-HHHHHHhcc--ccH--HhH-HHHHccCCEEEECCcC
Confidence            356799999999999999999999864 546888888853322 112211111  111  122 2345679999999975


Q ss_pred             CC
Q 022414          108 AS  109 (297)
Q Consensus       108 ~~  109 (297)
                      ..
T Consensus       226 ~~  227 (340)
T PRK14982        226 PK  227 (340)
T ss_pred             Cc
Confidence            43

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.84  E-value=0.00029  Score=58.83  Aligned_cols=111  Identities=16%  Similarity=0.097  Sum_probs=74.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCCCCccc---hhhhcC-CCceEEEecccCCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDN---LRKWIG-HPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~---~~~~~~-~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      |||.|+|+ |++|+.++..|+..+.- ++.+++.........   +..... ...-..+.+|-.-..+.+.|+|+..||.
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvitAG~   79 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVITAGV   79 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEeCCC
Confidence            68999999 99999999999887644 899999973222211   111110 0011122222112456789999999985


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ..  ....+..+.+..|..-...+.+...+.+-  .++.+|
T Consensus        80 pr--KpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          80 PR--KPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             CC--CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            43  44567788899999999999999988875  444443

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.84  E-value=0.00017  Score=61.96  Aligned_cols=102  Identities=15%  Similarity=0.175  Sum_probs=60.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC------CCc-e-EEEecccCCcccCCcCEEEEc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG------HPR-F-ELIRHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~------~~~-~-~~~~~Dl~~~~~~~~d~vi~~  104 (297)
                      ++|.|+|+||++|++|++.|.+++..++..+..+.............      ... + +...-++......++|+|+.+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVf~a   80 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPVASKDVDIVFSA   80 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHHHhccCCEEEEe
Confidence            58999999999999999999887646887774433221111111110      000 1 111112221233578999987


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      ...                +  ....+...+.+.|+++|-.|+.+-+.
T Consensus        81 ~p~----------------~--~s~~~~~~~~~~G~~VIDlsg~fR~~  110 (341)
T TIGR00978        81 LPS----------------E--VAEEVEPKLAEAGKPVFSNASNHRMD  110 (341)
T ss_pred             CCH----------------H--HHHHHHHHHHHCCCEEEECChhhccC
Confidence            631                1  23344467777899888888876543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.82  E-value=0.00012  Score=62.88  Aligned_cols=100  Identities=12%  Similarity=0.183  Sum_probs=61.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCCCccchhhhcC---C-CceEEEecccCCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG---H-PRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~~---~-~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      |+|+|.||||++|..+++.|.++...+++.+ ++... ....+.....   . ....+...|..+ ...++|+||.|.+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~s-agk~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~DvVf~alP~   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRES-AGKPVSEVHPHLRGLVDLNLEPIDEEE-IAEDADVVFLALPH   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchh-cCCChHHhCccccccCCceeecCCHHH-hhcCCCEEEECCCc
Confidence            6899999999999999999998854777744 43221 1111221111   0 011222222211 11379999988742


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      .                  ....++..+.+.|+++|=.|+..=+.
T Consensus        79 ~------------------~s~~~~~~~~~~G~~VIDlS~~fR~~  105 (346)
T TIGR01850        79 G------------------VSAELAPELLAAGVKVIDLSADFRLK  105 (346)
T ss_pred             h------------------HHHHHHHHHHhCCCEEEeCChhhhcC
Confidence            1                  35667777777888999888876543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.80  E-value=0.00028  Score=59.98  Aligned_cols=112  Identities=13%  Similarity=0.094  Sum_probs=72.5

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCC------eEEEEecCCCCC-ccchhhhcCCCc---e-EEEecccCCcccCCcCEEE
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYFTGS-KDNLRKWIGHPR---F-ELIRHDVTEPLLIEVDQIY  102 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~------~v~~~~r~~~~~-~~~~~~~~~~~~---~-~~~~~Dl~~~~~~~~d~vi  102 (297)
                      ||.|+|++|.+|+.++..|...+..      +++++++..... .+.....+....   . ..+..+-....+.++|+||
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV   80 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI   80 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence            5899999999999999999886532      699998854321 111110010000   0 0111111124567899999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C--eEEEEec
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTST  147 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~v~~Ss  147 (297)
                      ++||....  ...+..+.+..|+...+.+....++.. -  .++.+|-
T Consensus        81 itAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        81 LVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             EcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            99986532  244578888999999999999998874 3  5565553

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.79  E-value=9.2e-05  Score=63.40  Aligned_cols=93  Identities=13%  Similarity=0.178  Sum_probs=59.2

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCe---EEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~  110 (297)
                      +|+|.||||++|+++++.|.+++ +.   +..+.+...... .+.  +  .+.+....|+......++|++|.+++..  
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~-hp~~~l~~~as~~~~g~-~~~--~--~~~~~~~~~~~~~~~~~~D~v~~a~g~~--   72 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERN-FPIDKLVLLASDRSAGR-KVT--F--KGKELEVNEAKIESFEGIDIALFSAGGS--   72 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCC-CChhhEEEEeccccCCC-eee--e--CCeeEEEEeCChHHhcCCCEEEECCCHH--
Confidence            58999999999999999999977 44   334444322111 111  1  1244555565544557899999988632  


Q ss_pred             cccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                                      ....++..+.+.|+++|=.|+..-
T Consensus        73 ----------------~s~~~a~~~~~~G~~VID~ss~~R   96 (339)
T TIGR01296        73 ----------------VSKEFAPKAAKCGAIVIDNTSAFR   96 (339)
T ss_pred             ----------------HHHHHHHHHHHCCCEEEECCHHHh
Confidence                            244556666667887666666543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.72  E-value=0.00048  Score=58.64  Aligned_cols=100  Identities=17%  Similarity=0.209  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..++|.|.||||++|.++++.|.++  ...++..+....... ..+.  +....+.+.  ++......++|++|.+++..
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG-~~~~--~~~~~~~v~--~~~~~~~~~~Dvvf~a~p~~   77 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAG-ETLR--FGGKSVTVQ--DAAEFDWSQAQLAFFVAGRE   77 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCC-ceEE--ECCcceEEE--eCchhhccCCCEEEECCCHH
Confidence            4689999999999999999999985  335666665432111 1111  111122222  44333335789999877421


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecC
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~  153 (297)
                                        ....++..+.+.|+++|=.|+.+-+.+
T Consensus        78 ------------------~s~~~~~~~~~~g~~VIDlS~~fRl~~  104 (336)
T PRK08040         78 ------------------ASAAYAEEATNAGCLVIDSSGLFALEP  104 (336)
T ss_pred             ------------------HHHHHHHHHHHCCCEEEECChHhcCCC
Confidence                              355666667778998888888775543

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.70  E-value=0.00045  Score=58.51  Aligned_cols=110  Identities=14%  Similarity=0.168  Sum_probs=75.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhh---cC--CCceEEEecccCCcccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKW---IG--HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~---~~--~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      +||.|+|+ |.+|+.++..|+..|. +++.+++++..........+   ..  .........|.  ..+.++|+||+++|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~--~~l~~aDIVIitag   77 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDY--SDCKDADIVVITAG   77 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCH--HHhCCCCEEEEccC
Confidence            48999995 9999999999999885 48999999654332211111   10  11222222222  24578999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      ...  ....+..+.+..|....+.+++.+++.+-  .++.+|-
T Consensus        78 ~~~--~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          78 APQ--KPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            643  23456778889999999999999998764  5666653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.69  E-value=0.00033  Score=59.72  Aligned_cols=101  Identities=14%  Similarity=0.197  Sum_probs=62.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCe---EEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ...++|.|.||||++|+.+++.|.++..++   +..+.......+ .+  .+....+.+...|.  ..+.++|++|.+++
T Consensus         3 ~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk-~~--~~~~~~l~v~~~~~--~~~~~~Divf~a~~   77 (347)
T PRK06728          3 EKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGK-TV--QFKGREIIIQEAKI--NSFEGVDIAFFSAG   77 (347)
T ss_pred             CCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCC-Ce--eeCCcceEEEeCCH--HHhcCCCEEEECCC
Confidence            345899999999999999999999654366   544543321111 11  11112333333332  33467999998874


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecC
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~  153 (297)
                      ..                  ....+...+.+.|+.+|=.||.+-+..
T Consensus        78 ~~------------------~s~~~~~~~~~~G~~VID~Ss~fR~~~  106 (347)
T PRK06728         78 GE------------------VSRQFVNQAVSSGAIVIDNTSEYRMAH  106 (347)
T ss_pred             hH------------------HHHHHHHHHHHCCCEEEECchhhcCCC
Confidence            21                  355666667778888888888775543

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.65  E-value=0.00083  Score=56.86  Aligned_cols=111  Identities=14%  Similarity=0.114  Sum_probs=75.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccc---hhhhcCC-CceEEEe-cccCCcccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKWIGH-PRFELIR-HDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~---~~~~~~~-~~~~~~~-~Dl~~~~~~~~d~vi~~  104 (297)
                      +.+||.|+|+ |.+|..++..|...+. .++.+++.+.......   +.....- ....... .|..  .+.++|+||.+
T Consensus         2 ~~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~--~~~~adivvit   78 (312)
T cd05293           2 PRNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS--VTANSKVVIVT   78 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH--HhCCCCEEEEC
Confidence            3579999996 9999999999988874 5799998865322211   1111100 1112332 3443  46899999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ||....  ...+..+.+..|....+.+.+.+++.+-  .++.+|
T Consensus        79 aG~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          79 AGARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            986542  3456778889999999999999988864  556555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.61  E-value=0.0015  Score=55.21  Aligned_cols=110  Identities=15%  Similarity=0.013  Sum_probs=74.3

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCC-CceEEEe--cc-cCCcccCCcCEEEEccCCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH-PRFELIR--HD-VTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~--~D-l~~~~~~~~d~vi~~a~~~  108 (297)
                      ||.|+|++|.+|.+++..|...+. .++.+++++. ...+. ..+... .......  .| -.-..+.+.|+||.+||..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a-~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVA-ADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEE-chhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCC
Confidence            689999999999999999988873 4889998865 11111 111111 1122221  11 0124678999999999864


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      .  ....+..+.+..|..-.+.+++..++.+-  .++.+|-
T Consensus        79 ~--~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        79 R--KPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             C--CCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            3  23456778889999999999999988864  4555554

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.55  E-value=0.00054  Score=57.59  Aligned_cols=84  Identities=15%  Similarity=0.182  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~  111 (297)
                      +++|.|.||||++|.+|++.|.++...++..+..+...            ..     +.......++|++|.+...    
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~------------~~-----~~~~~~~~~~DvvFlalp~----   60 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK------------DA-----AARRELLNAADVAILCLPD----   60 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC------------cc-----cCchhhhcCCCEEEECCCH----
Confidence            58899999999999999999999875566666543211            00     1111223468999987621    


Q ss_pred             ccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                                    .....++..+.+.|+++|=.|+.+-
T Consensus        61 --------------~~s~~~~~~~~~~g~~VIDlSadfR   85 (313)
T PRK11863         61 --------------DAAREAVALIDNPATRVIDASTAHR   85 (313)
T ss_pred             --------------HHHHHHHHHHHhCCCEEEECChhhh
Confidence                          1344555666677889888888764

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.49  E-value=0.00073  Score=56.66  Aligned_cols=101  Identities=13%  Similarity=0.153  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-C---ceEEEecccCCcccCCcCEEEEccC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-P---RFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~---~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      +++||.|.||+||.|.+|++.|..+...++...+.+.. ....+...... .   ...+...|.......++|+||.+.-
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~-~g~~~~~~~p~l~g~~~l~~~~~~~~~~~~~~~DvvFlalP   79 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRER-AGKPVSDVHPNLRGLVDLPFQTIDPEKIELDECDVVFLALP   79 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhh-cCCchHHhCcccccccccccccCChhhhhcccCCEEEEecC
Confidence            36899999999999999999999997567655554332 22222222211 1   1222222222223446899998752


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      -.                  ....++......|+++|=+|+.+=
T Consensus        80 hg------------------~s~~~v~~l~~~g~~VIDLSadfR  105 (349)
T COG0002          80 HG------------------VSAELVPELLEAGCKVIDLSADFR  105 (349)
T ss_pred             ch------------------hHHHHHHHHHhCCCeEEECCcccc
Confidence            11                  244566666677888888888653

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.49  E-value=0.0008  Score=55.42  Aligned_cols=68  Identities=18%  Similarity=0.320  Sum_probs=41.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      +|+|.|+|++|.+|+.+++.+.+....++.++...........    ...++. ...|+.. .+.++|+|++++
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~----~~~~i~-~~~dl~~-ll~~~DvVid~t   68 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ----GALGVA-ITDDLEA-VLADADVLIDFT   68 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc----CCCCcc-ccCCHHH-hccCCCEEEECC
Confidence            3799999999999999999988753377777554332221111    111221 1223321 223689999887

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.48  E-value=0.001  Score=56.98  Aligned_cols=105  Identities=23%  Similarity=0.308  Sum_probs=69.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc------------------------cchhhhcCCCceEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK------------------------DNLRKWIGHPRFEL   85 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~------------------------~~~~~~~~~~~~~~   85 (297)
                      ....+|+|.|+ |.+|+++++.|...|..+++++++..-...                        +.+.++...-.++.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            34689999996 999999999999999559999998631100                        01111112223445


Q ss_pred             EecccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           86 IRHDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        86 ~~~Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      +..+++..    ...++|+||.+.-                 |...-..+.++|.+.++++|+.+....+|
T Consensus       101 ~~~~~~~~~~~~~~~~~DlVid~~D-----------------n~~~r~~ln~~~~~~~iP~i~~~~~g~~G  154 (339)
T PRK07688        101 IVQDVTAEELEELVTGVDLIIDATD-----------------NFETRFIVNDAAQKYGIPWIYGACVGSYG  154 (339)
T ss_pred             EeccCCHHHHHHHHcCCCEEEEcCC-----------------CHHHHHHHHHHHHHhCCCEEEEeeeeeee
Confidence            55555432    2456899998752                 23334467788999999999988766555

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.48  E-value=0.00019  Score=59.35  Aligned_cols=74  Identities=15%  Similarity=0.212  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEeccc-----CCcccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV-----TEPLLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~d~vi~~a~  106 (297)
                      ...++|-|||||.|.-++++|..+| .+-.+-.|+..+. ..+...+   +-+....++     .+....+.++|+||+|
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g-~~~aLAgRs~~kl-~~l~~~L---G~~~~~~p~~~p~~~~~~~~~~~VVlncvG   80 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREG-LTAALAGRSSAKL-DALRASL---GPEAAVFPLGVPAALEAMASRTQVVLNCVG   80 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcC-CchhhccCCHHHH-HHHHHhc---CccccccCCCCHHHHHHHHhcceEEEeccc
Confidence            3679999999999999999999999 6666666643221 1122222   222222222     2334567999999999


Q ss_pred             CCCC
Q 022414          107 PASP  110 (297)
Q Consensus       107 ~~~~  110 (297)
                      +...
T Consensus        81 Pyt~   84 (382)
T COG3268          81 PYTR   84 (382)
T ss_pred             cccc
Confidence            7653

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.47  E-value=0.00029  Score=56.80  Aligned_cols=60  Identities=18%  Similarity=0.233  Sum_probs=39.5

Q ss_pred             cCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------------ccCCcCEEEEccC
Q 022414           39 GGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------------LLIEVDQIYHLAC  106 (297)
Q Consensus        39 GatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------------~~~~~d~vi~~a~  106 (297)
                      .++|.||.++++.|+++| ++|+++++....     ...   .   ...+|+.+.            ...++|++||+||
T Consensus        22 ~SSGgIG~AIA~~la~~G-a~Vvlv~~~~~l-----~~~---~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg   89 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAG-HEVTLVTTKRAL-----KPE---P---HPNLSIREIETTKDLLITLKELVQEHDILIHSMA   89 (227)
T ss_pred             CcccHHHHHHHHHHHHCC-CEEEEEcChhhc-----ccc---c---CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence            348999999999999999 999988763111     000   0   112344332            2236899999999


Q ss_pred             CCCC
Q 022414          107 PASP  110 (297)
Q Consensus       107 ~~~~  110 (297)
                      ....
T Consensus        90 v~d~   93 (227)
T TIGR02114        90 VSDY   93 (227)
T ss_pred             eccc
Confidence            7543

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.47  E-value=0.0018  Score=55.03  Aligned_cols=113  Identities=12%  Similarity=0.087  Sum_probs=75.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-C-----eEEEEecCCCC--Ccc---chhhhc-C-CCceEEEecccCCcccCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-N-----EVIVVDNYFTG--SKD---NLRKWI-G-HPRFELIRHDVTEPLLIE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~-----~v~~~~r~~~~--~~~---~~~~~~-~-~~~~~~~~~Dl~~~~~~~   97 (297)
                      +.+||.|+|++|.+|..++..|...+. .     ++.+++.+...  ...   ++.... . ...+.....|  ...+.+
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~--y~~~~d   80 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDP--NVAFKD   80 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecCh--HHHhCC
Confidence            358999999999999999999987663 2     78898885421  111   111111 0 0122222111  245678


Q ss_pred             cCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEec
Q 022414           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTST  147 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss  147 (297)
                      +|+||.+||...  ....+..+.+..|..-.+.+....++..   ..++.+|-
T Consensus        81 aDiVVitaG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         81 ADVALLVGARPR--GPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             CCEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            999999998643  3356788889999999999999998844   25666653

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.47  E-value=0.0023  Score=54.38  Aligned_cols=111  Identities=15%  Similarity=0.111  Sum_probs=74.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC-C-----eEEEEecCCCC-CccchhhhcCC------CceEEEecccCCcccCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK-N-----EVIVVDNYFTG-SKDNLRKWIGH------PRFELIRHDVTEPLLIEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~-~-----~v~~~~r~~~~-~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~   98 (297)
                      ..||.|+|++|.+|++++..|...+. .     ++++++..... ........+..      .++.....|  ...+.++
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~--~~~~~da   80 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDP--EEAFKDV   80 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecCh--HHHhCCC
Confidence            47899999999999999999988873 3     78999885421 11111111110      112221111  2356789


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC---eEEEEe
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTS  146 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~v~~S  146 (297)
                      |+||.+||...  ....+..+.+..|....+.+...+++.+-   .++.+|
T Consensus        81 DvVVitAG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        81 DAALLVGAFPR--KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             CEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            99999998643  34567888899999999999999988753   455554

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.46  E-value=0.00068  Score=58.19  Aligned_cols=98  Identities=14%  Similarity=0.141  Sum_probs=58.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCe---EEEEecCCCCCccchhhhcCCCceEEEecccCC-cccCCcCEEEEccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLACP  107 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~d~vi~~a~~  107 (297)
                      |++|.|.||||++|+.+++.|+++..+.   +..++.......  .. .+....  ....++.+ ..+.++|++|.+++.
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~--~~-~f~g~~--~~v~~~~~~~~~~~~Divf~a~~~   75 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGA--AP-SFGGKE--GTLQDAFDIDALKKLDIIITCQGG   75 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCc--cc-ccCCCc--ceEEecCChhHhcCCCEEEECCCH
Confidence            3789999999999999999666664365   555554321111  11 111111  22233332 345679999998742


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCe--EEEEecceeec
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILLTSTSEVYG  152 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r--~v~~Ss~~~~~  152 (297)
                      .                  ....+...+.+.|++  +|=.||..-+.
T Consensus        76 ~------------------~s~~~~~~~~~aG~~~~VID~Ss~fR~~  104 (369)
T PRK06598         76 D------------------YTNEVYPKLRAAGWQGYWIDAASTLRMK  104 (369)
T ss_pred             H------------------HHHHHHHHHHhCCCCeEEEECChHHhCC
Confidence            1                  355666777778864  55566655433

>PLN02602 lactate dehydrogenase

Probab=97.45  E-value=0.0023  Score=54.90  Aligned_cols=109  Identities=16%  Similarity=0.195  Sum_probs=74.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccc---hhhhcC-CCceEEEe-cccCCcccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKWIG-HPRFELIR-HDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~---~~~~~~-~~~~~~~~-~Dl~~~~~~~~d~vi~~a~  106 (297)
                      +||.|+|+ |.+|..++..|+..+. .++.+++.+.......   +..... .....+.. .|.  ..+.++|+||.+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy--~~~~daDiVVitAG  114 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDY--AVTAGSDLCIVTAG  114 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCH--HHhCCCCEEEECCC
Confidence            79999996 9999999999998874 4799999865332221   111110 11222222 232  23689999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ....  ...+..+.+..|....+.+++..++.+-  .++.+|
T Consensus       115 ~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        115 ARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             CCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            6532  3456678889999999999999988764  556555

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.45  E-value=0.0025  Score=47.44  Aligned_cols=100  Identities=16%  Similarity=0.172  Sum_probs=65.0

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc------------------c----hhhhcCCCceEEEecccC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------------------N----LRKWIGHPRFELIRHDVT   91 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~------------------~----~~~~~~~~~~~~~~~Dl~   91 (297)
                      +|+|.|+ |.+|.++++.|...|..++++++...-....                  .    +.+..+.-.++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899995 9999999999999996688888765311111                  0    111111223444444443


Q ss_pred             Cc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceee
Q 022414           92 EP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (297)
Q Consensus        92 ~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~  151 (297)
                      ..    ...++|+||.+..                 +......+.++|++.++.++..++....
T Consensus        80 ~~~~~~~~~~~diVi~~~d-----------------~~~~~~~l~~~~~~~~i~~i~~~~~g~~  126 (143)
T cd01483          80 EDNLDDFLDGVDLVIDAID-----------------NIAVRRALNRACKELGIPVIDAGGLGLG  126 (143)
T ss_pred             hhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcCCCcE
Confidence            32    2457999998762                 2334667889999999999888876543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.45  E-value=0.0018  Score=52.22  Aligned_cols=95  Identities=19%  Similarity=0.258  Sum_probs=55.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeE-EEEecCCCCCc-cchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEV-IVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v-~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      +|||.|.|++|-+|+.+++.+.+.+..++ -++.|...... ...........+.....|-.......+|++|....+. 
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~~~~~~~~~~~DV~IDFT~P~-   80 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPVTDDLLLVKADADVLIDFTTPE-   80 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCceeecchhhcccCCCEEEECCCch-
Confidence            68999999999999999999998864554 44566543221 1111111111222222222334556789999875332 


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEE
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL  144 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~  144 (297)
                                       ++...++.|.++++++|.
T Consensus        81 -----------------~~~~~l~~~~~~~~~lVI   98 (266)
T COG0289          81 -----------------ATLENLEFALEHGKPLVI   98 (266)
T ss_pred             -----------------hhHHHHHHHHHcCCCeEE
Confidence                             355666777777665443

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.43  E-value=0.0026  Score=53.70  Aligned_cols=108  Identities=17%  Similarity=0.210  Sum_probs=73.7

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccc---hhhhcC---CCceEEEecccCCcccCCcCEEEEccC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKWIG---HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~---~~~~~~---~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ||.|.|+ |.+|..++..|+..+. .++.+++.........   +.....   ...+.....|.  ..+.++|+||.+||
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y--~~~~~aDivvitaG   77 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDY--DDCADADIIVITAG   77 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCH--HHhCCCCEEEECCC
Confidence            6899998 9999999999998874 4799998864332222   111111   11334443332  35688999999998


Q ss_pred             CCCCcccccC--hhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          107 PASPIFYKYN--PVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       107 ~~~~~~~~~~--~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ....  ...+  ..+.+..|..-.+.+...+++.+-  .++.+|
T Consensus        78 ~~~k--pg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          78 PSID--PGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             CCCC--CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            6432  2233  477889999999999999999875  344444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.42  E-value=0.0023  Score=54.32  Aligned_cols=110  Identities=13%  Similarity=0.076  Sum_probs=71.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC----C-CceEEE-ecccCCcccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----H-PRFELI-RHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~----~-~~~~~~-~~Dl~~~~~~~~d~vi~~a  105 (297)
                      +|||.|+|+ |.+|..++..|...|..+|++++++..........+..    . ...... ..|.  ..+.++|+||.++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~--~~~~~aDiVii~~   78 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY--EDIAGSDVVVITA   78 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH--HHHCCCCEEEECC
Confidence            489999998 99999999999988822899999865432221111110    0 011221 1233  3467899999998


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      +...  ....+..+.+..|......+++.+.+..-  .+|.+|
T Consensus        79 ~~p~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         79 GVPR--KPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            7543  22345556677888888888888877654  455554

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.41  E-value=0.002  Score=56.83  Aligned_cols=112  Identities=9%  Similarity=0.042  Sum_probs=78.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhc-------CC-CeEEEEecCCCCCccchhhhcC-----CCceEEEecccCCcccCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMEN-------EK-NEVIVVDNYFTGSKDNLRKWIG-----HPRFELIRHDVTEPLLIEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~-------g~-~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~   98 (297)
                      .-||.|+|++|.+|.+++..|+..       +. .++++++++..........+..     ...+.+...|  ...++++
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~--ye~~kda  177 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDP--YEVFQDA  177 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCC--HHHhCcC
Confidence            478999999999999999999887       52 3788888865443322221111     0123222222  2457889


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHH-cCC--eEEEEec
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR-VGA--RILLTST  147 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~--r~v~~Ss  147 (297)
                      |+||..||...  ....+..+.+..|..-.+.+.+...+ .+-  ++|.+|-
T Consensus       178 DiVVitAG~pr--kpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        178 EWALLIGAKPR--GPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             CEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            99999998643  34567888899999999999999998 453  6666664

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.41  E-value=0.001  Score=55.79  Aligned_cols=100  Identities=17%  Similarity=0.264  Sum_probs=55.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC-CCe-EEEEecCCCCCccchhhhcCCCceEEEecccCC-cccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE-KNE-VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g-~~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~d~vi~~a~~~  108 (297)
                      +++|.|.||||.+|+.+++.|.++. ..+ +.++........+ ... .....+.. .-+..+ ....++|+++.++|..
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~-~~~-f~~~~~~v-~~~~~~~~~~~~~Divf~~ag~~   77 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKK-YIE-FGGKSIGV-PEDAADEFVFSDVDIVFFAAGGS   77 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCc-ccc-ccCccccC-ccccccccccccCCEEEEeCchH
Confidence            4789999999999999999999964 122 3333322111110 000 00001111 111111 2334799999999632


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                                        ....+...+.+.|+-+|=-||.+-+.
T Consensus        78 ------------------~s~~~~p~~~~~G~~VIdnsSa~Rm~  103 (334)
T COG0136          78 ------------------VSKEVEPKAAEAGCVVIDNSSAFRMD  103 (334)
T ss_pred             ------------------HHHHHHHHHHHcCCEEEeCCcccccC
Confidence                              24677888889996444445544443

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.40  E-value=0.0007  Score=56.51  Aligned_cols=75  Identities=21%  Similarity=0.320  Sum_probs=49.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCC-ceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP-RFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+++++|+|+ |.+|++++..|.+.|..+|++++|+..... .+...+... .+.+ ..+. .....++|+|||+....
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~-~l~~~~~~~~~~~~-~~~~-~~~~~~~DivInaTp~g  196 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAE-ELAKLFGALGKAEL-DLEL-QEELADFDLIINATSAG  196 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHhhhccceee-cccc-hhccccCCEEEECCcCC
Confidence            45789999996 999999999999999678999999653322 222222111 1222 1121 23346799999987543

>PRK04148 hypothetical protein; Provisional

Probab=97.39  E-value=0.0015  Score=47.43  Aligned_cols=88  Identities=24%  Similarity=0.275  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccC---CcCEEEEccCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACP  107 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~---~~d~vi~~a~~  107 (297)
                      +++++++.| .| .|.+++..|.+.| ++|++++.++...    . ......++.+..|+.++...   ++|.++.+=  
T Consensus        16 ~~~kileIG-~G-fG~~vA~~L~~~G-~~ViaIDi~~~aV----~-~a~~~~~~~v~dDlf~p~~~~y~~a~liysir--   85 (134)
T PRK04148         16 KNKKIVELG-IG-FYFKVAKKLKESG-FDVIVIDINEKAV----E-KAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIR--   85 (134)
T ss_pred             cCCEEEEEE-ec-CCHHHHHHHHHCC-CEEEEEECCHHHH----H-HHHHhCCeEEECcCCCCCHHHHhcCCEEEEeC--
Confidence            358899999 56 8899999999999 9999999865321    1 11223678999999987543   688887542  


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEE
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v  143 (297)
                              .+       ...+..+++.|++.++.++
T Consensus        86 --------pp-------~el~~~~~~la~~~~~~~~  106 (134)
T PRK04148         86 --------PP-------RDLQPFILELAKKINVPLI  106 (134)
T ss_pred             --------CC-------HHHHHHHHHHHHHcCCCEE
Confidence                    11       2346689999999999543

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.38  E-value=0.00014  Score=63.30  Aligned_cols=99  Identities=14%  Similarity=0.190  Sum_probs=63.0

Q ss_pred             cCCCEEEEEcC----------------CchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc
Q 022414           30 QSNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP   93 (297)
Q Consensus        30 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   93 (297)
                      ..+++++||||                ||.+|.+++++|..+| .+|+++.+.....   ..     ..+..  .|+.+.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G-a~V~~~~g~~~~~---~~-----~~~~~--~~v~~~  251 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG-ADVTLITGPVSLL---TP-----PGVKS--IKVSTA  251 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC-CEEEEeCCCCccC---CC-----CCcEE--EEeccH
Confidence            56899999999                4679999999999999 9999988754221   10     11222  222211


Q ss_pred             ----------ccCCcCEEEEccCCCCCcccccC------hhhhHHHhHHHHHHHHHHHHHcC
Q 022414           94 ----------LLIEVDQIYHLACPASPIFYKYN------PVKTIKTNVIGTLNMLGLAKRVG  139 (297)
Q Consensus        94 ----------~~~~~d~vi~~a~~~~~~~~~~~------~~~~~~~n~~~~~~l~~~~~~~~  139 (297)
                                ...++|++|++||..........      ....+..++.-+..+++..++..
T Consensus       252 ~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       252 EEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             HHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence                      22358999999998764332111      11223456666777777776543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.37  E-value=0.0015  Score=55.97  Aligned_cols=104  Identities=21%  Similarity=0.292  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc------------------------cchhhhcCCCceEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK------------------------DNLRKWIGHPRFELI   86 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~------------------------~~~~~~~~~~~~~~~   86 (297)
                      ..++|+|.|+ |.+|+++++.|...|.-+++++++..-...                        +.+.+....-.++.+
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~  101 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV  101 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence            4689999995 779999999999999558998888741110                        111112222245555


Q ss_pred             ecccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           87 RHDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        87 ~~Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      ..|++..    ...++|+||.+..                 |...-..+-++|.+.++++|+.+....+|
T Consensus       102 ~~~~~~~~~~~~~~~~DlVid~~D-----------------~~~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475        102 VTDVTVEELEELVKEVDLIIDATD-----------------NFDTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             eccCCHHHHHHHhcCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            5565422    3457999998762                 12223346688889999999887665544

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.37  E-value=0.0014  Score=58.73  Aligned_cols=76  Identities=18%  Similarity=0.077  Sum_probs=49.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccC-CcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-EVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~-~~d~vi~~a~~~  108 (297)
                      ..+++|+|+|++| +|.+.++.|.+.| ++|.+.++.......... .+...++.+..+........ ++|.||+..|+.
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G-~~V~~~d~~~~~~~~~~~-~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~   79 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLG-ANVTVNDGKPFSENPEAQ-ELLEEGIKVICGSHPLELLDEDFDLMVKNPGIP   79 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCC-CEEEEEcCCCccchhHHH-HHHhcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence            3578999999988 9999999999999 999998875432222111 22223454443322111122 489999988764

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.37  E-value=0.0037  Score=53.00  Aligned_cols=109  Identities=16%  Similarity=0.158  Sum_probs=73.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcC----CCceEEEecccCCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      |||.|.|+ |.+|..++..|+..|. .+|.+++++..........+..    .........|.  ..+.++|++|.+++.
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~--~~l~~aDiViita~~   77 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDY--ADCKGADVVVITAGA   77 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCH--HHhCCCCEEEEccCC
Confidence            68999997 9999999999999984 5899999865432211111110    01222223333  346789999999985


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ..  ....+..+.+..|......+++.+++.+-  .++.++
T Consensus        78 ~~--~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          78 NQ--KPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            43  22345667788899999999998888764  444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.33  E-value=0.0032  Score=49.65  Aligned_cols=105  Identities=13%  Similarity=0.258  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc------------------------hhhhcCCCceEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN------------------------LRKWIGHPRFELI   86 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~------------------------~~~~~~~~~~~~~   86 (297)
                      ...+|+|.|++| +|.++++.|...|-.++++++...-...+.                        +.+..+.-+++.+
T Consensus        18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~   96 (198)
T cd01485          18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV   96 (198)
T ss_pred             hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            468999999777 999999999999977888888763211100                        1112222234444


Q ss_pred             ecccCC------cccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecC
Q 022414           87 RHDVTE------PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (297)
Q Consensus        87 ~~Dl~~------~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~  153 (297)
                      ..++.+      .-..++|+||.+..                 +......+-+.|++.++++|+.++.+.+|.
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d-----------------~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  152 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEE-----------------NYERTAKVNDVCRKHHIPFISCATYGLIGY  152 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence            444431      12346888886641                 122345577899999999999988777664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.33  E-value=0.00076  Score=52.35  Aligned_cols=71  Identities=24%  Similarity=0.345  Sum_probs=44.4

Q ss_pred             CCCEEEEEcC----------------CchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-
Q 022414           31 SNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-   93 (297)
Q Consensus        31 ~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-   93 (297)
                      .+++||||+|                ||.+|.+|++++..+| ++|+++..+..-..        ...++.+..+-.+. 
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~G-a~V~li~g~~~~~~--------p~~~~~i~v~sa~em   72 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRG-AEVTLIHGPSSLPP--------PPGVKVIRVESAEEM   72 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT--EEEEEE-TTS------------TTEEEEE-SSHHHH
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCC-CEEEEEecCccccc--------cccceEEEecchhhh
Confidence            4678888876                5899999999999999 99999998632111        13566665544322 


Q ss_pred             ------ccCCcCEEEEccCCCCC
Q 022414           94 ------LLIEVDQIYHLACPASP  110 (297)
Q Consensus        94 ------~~~~~d~vi~~a~~~~~  110 (297)
                            .+...|++|++|+....
T Consensus        73 ~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   73 LEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHGGGGSEEEE-SB--SE
T ss_pred             hhhhccccCcceeEEEecchhhe
Confidence                  33468999999998764

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=97.32  E-value=0.0031  Score=45.55  Aligned_cols=102  Identities=14%  Similarity=0.196  Sum_probs=55.8

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceE-EEecccC--CcccCCcCEEEEccCCCCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFE-LIRHDVT--EPLLIEVDQIYHLACPASP  110 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~--~~~~~~~d~vi~~a~~~~~  110 (297)
                      |+.|+|++|.+|..+++.|.+....++.++..+.....+......  +++. ....++.  +....++|+||.+.+... 
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~-   77 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAG--PHLKGEVVLELEPEDFEELAVDIVFLALPHGV-   77 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHC--cccccccccccccCChhhcCCCEEEEcCCcHH-
Confidence            588999999999999999999633788877332221222222211  1121 1111222  222247899998874221 


Q ss_pred             cccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                                   .......+. .+.+.|..+|.+||..-+.
T Consensus        78 -------------~~~~~~~~~-~~~~~g~~viD~s~~~~~~  105 (122)
T smart00859       78 -------------SKEIAPLLP-KAAEAGVKVIDLSSAFRMD  105 (122)
T ss_pred             -------------HHHHHHHHH-hhhcCCCEEEECCccccCC
Confidence                         111111222 2235677788888876543

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.30  E-value=0.0069  Score=51.57  Aligned_cols=114  Identities=11%  Similarity=0.039  Sum_probs=74.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhh---hcC--CCceEEEe-cccCCcccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---WIG--HPRFELIR-HDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~---~~~--~~~~~~~~-~Dl~~~~~~~~d~vi~~  104 (297)
                      ..+||.|+| .|.+|..++..|+..|..+|++++.+..........   ...  ....++.. .|+  .++.++|+||.+
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~--~~l~~aDiVI~t   81 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY--EDIAGSDVVIVT   81 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH--HHhCCCCEEEEC
Confidence            347999999 599999999999988854799999866532211111   111  11223332 344  367899999999


Q ss_pred             cCCCCCccc---ccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          105 ACPASPIFY---KYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       105 a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      +|.......   +.+..+.+..|....+.+++.+.+..-  .++.+|-
T Consensus        82 ag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         82 AGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            986542211   114566778888888888888888764  4565553

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.29  E-value=0.0024  Score=55.39  Aligned_cols=112  Identities=12%  Similarity=0.065  Sum_probs=73.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCe------EEEE--ecCCCCCccchhhhc----C-CCceEEEecccCCcccCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNE------VIVV--DNYFTGSKDNLRKWI----G-HPRFELIRHDVTEPLLIEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~------v~~~--~r~~~~~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~   98 (297)
                      .-||.|+|++|.+|.+++-.|...+...      ++++  +++..........+.    . ..++.....|  ...++++
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~--y~~~kda  121 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP--YEVFEDA  121 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC--HHHhCCC
Confidence            4789999999999999999999887433      3333  443322221111111    0 0123222222  2467899


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C--eEEEEec
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTST  147 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~v~~Ss  147 (297)
                      |+||.+||...  ....+..+.+..|....+.+...+++.. -  +++.+|-
T Consensus       122 DIVVitAG~pr--kpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       122 DWALLIGAKPR--GPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             CEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            99999998643  3456778889999999999999998843 2  5666663

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.27  E-value=0.0043  Score=48.89  Aligned_cols=105  Identities=17%  Similarity=0.329  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc----------------------chhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~~   88 (297)
                      .+.+|+|.|+.| +|.++++.|...|-.++++++...-...+                      .+.++.+.-.++....
T Consensus        20 ~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~   98 (197)
T cd01492          20 RSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD   98 (197)
T ss_pred             HhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence            468999999666 99999999999997788888765321111                      0112222223444443


Q ss_pred             ccCCc---ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecC
Q 022414           89 DVTEP---LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (297)
Q Consensus        89 Dl~~~---~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~  153 (297)
                      .+.+.   -..++|+|+.+..                 +......+-+.|++.++++++.++...+|.
T Consensus        99 ~~~~~~~~~~~~~dvVi~~~~-----------------~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  149 (197)
T cd01492          99 DISEKPEEFFSQFDVVVATEL-----------------SRAELVKINELCRKLGVKFYATGVHGLFGF  149 (197)
T ss_pred             CccccHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEecCCEEE
Confidence            33321   1357898887642                 122345667889999999999888776653

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.27  E-value=0.007  Score=45.01  Aligned_cols=189  Identities=15%  Similarity=0.064  Sum_probs=99.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEe-ccc-C-----CcccCCcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR-HDV-T-----EPLLIEVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~Dl-~-----~~~~~~~d~vi~~  104 (297)
                      ..+|+|.|+-|-+|++.++.+.+++ +-|.-++.......+  ..++....-++.. .+- .     .....++|.||+.
T Consensus         3 agrVivYGGkGALGSacv~~Fkann-ywV~siDl~eNe~Ad--~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CV   79 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANN-YWVLSIDLSENEQAD--SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCV   79 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcC-eEEEEEeeccccccc--ceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEe
Confidence            4789999999999999999999999 878777764322211  1111001111110 000 0     0123469999999


Q ss_pred             cCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecce-eecCCCCCCCCCCCCCCCCCCCCCChH
Q 022414          105 ACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSE-VYGDPLVHPQDESYWGNVNPIGVRSCY  176 (297)
Q Consensus       105 a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~-~~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (297)
                      ||...-..     ..++-+..++..++...--.+.+.+.-.  -++.+.... ..                .+.+..-.|
T Consensus        80 AGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl----------------~gTPgMIGY  143 (236)
T KOG4022|consen   80 AGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAAL----------------GGTPGMIGY  143 (236)
T ss_pred             eccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccccccc----------------CCCCcccch
Confidence            98543221     1122333444455443333333333211  244444332 22                233344679


Q ss_pred             HHhHHHHHHHHHHHHHH-hCCc----EEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHH
Q 022414          177 DEGKRVAETLMFDYHRQ-HGIE----IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~-~~~~----~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  251 (297)
                      +.+|.+.+++.+.++.+ ++++    .+.+.|-.+-.|.                 +.+.++    ....-+|++..-++
T Consensus       144 GMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPM-----------------NRKwMP----~ADfssWTPL~fi~  202 (236)
T KOG4022|consen  144 GMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPM-----------------NRKWMP----NADFSSWTPLSFIS  202 (236)
T ss_pred             hHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcc-----------------ccccCC----CCcccCcccHHHHH
Confidence            99999999999988744 3432    3334443333332                 222221    12233567777777


Q ss_pred             HHHHHHHhc
Q 022414          252 DGLIRLMEG  260 (297)
Q Consensus       252 ~~~~~~~~~  260 (297)
                      +.++...+.
T Consensus       203 e~flkWtt~  211 (236)
T KOG4022|consen  203 EHFLKWTTE  211 (236)
T ss_pred             HHHHHHhcc
Confidence            776665543

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.25  E-value=0.0042  Score=52.90  Aligned_cols=112  Identities=12%  Similarity=0.136  Sum_probs=73.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc-h--hhhcC--CCceEEEe-cccCCcccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-L--RKWIG--HPRFELIR-HDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~--~~~~~--~~~~~~~~-~Dl~~~~~~~~d~vi~~  104 (297)
                      ..+||.|+|| |.+|..++..|...|..++++++.+....... +  .....  ........ .|+  ..+.++|+||.+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~--~~l~~ADiVVit   80 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY--EDIKDSDVVVIT   80 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH--HHhCCCCEEEEC
Confidence            3589999997 99999999999888855788998865332211 1  00000  01122221 232  266899999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      +|....  ...+..+.+..|......+++.+.+..-  .++.+|-
T Consensus        81 ag~~~~--~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         81 AGVQRK--EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            986432  2345667788899888888888888764  4555543

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.25  E-value=0.0018  Score=51.16  Aligned_cols=72  Identities=15%  Similarity=0.269  Sum_probs=53.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ...+++|+|.|| |-+|...++.|++.| .+|+++++.   ..+.+........+.+...++....+.++|.||-+.
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~g-a~V~VIs~~---~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT   78 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYG-AHIVVISPE---LTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAAT   78 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCC-CeEEEEcCC---CCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcC
Confidence            456899999996 999999999999999 999998763   223333444334577776666666667889888654

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.24  E-value=0.0034  Score=53.11  Aligned_cols=110  Identities=15%  Similarity=0.091  Sum_probs=72.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-----CCceEEE-ecccCCcccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-----HPRFELI-RHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~-~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      |||.|.|+ |++|..++..|+..|..+|++++...............     ....... ..|+.  ...++|+||.++|
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~--~~~~aDiVIitag   78 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYA--DTANSDIVVITAG   78 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHH--HhCCCCEEEEcCC
Confidence            78999996 99999999999998833799999854322211111110     0011121 23443  2578999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      ...  ....+..+.+..|......+++.+.+.+-  .+|.+|-
T Consensus        79 ~p~--~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        79 LPR--KPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            543  22345667788899999999998888754  4555554

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=97.24  E-value=0.0019  Score=55.29  Aligned_cols=95  Identities=16%  Similarity=0.113  Sum_probs=57.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHH-hcCCCe---EEEEecCCCCCccchhhhcCCCceEEEecccCCc-ccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLM-ENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~-~~g~~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~d~vi~~a~~  107 (297)
                      |+|.|.||||.+|+.+++.|. ++. +.   +++++........   ........  ..-++.+. .+.++|++|.++|.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~-fp~~~~~~~ss~~s~g~~---~~f~~~~~--~v~~~~~~~~~~~vDivffa~g~   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERD-FDAIRPVFFSTSQLGQAA---PSFGGTTG--TLQDAFDIDALKALDIIITCQGG   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCC-CccccEEEEEchhhCCCc---CCCCCCcc--eEEcCcccccccCCCEEEEcCCH
Confidence            589999999999999999999 444 43   3444332111111   01111122  33344443 56789999999852


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceee
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVY  151 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~  151 (297)
                                        .....+...+.+.|.  .+|=-||..-+
T Consensus        75 ------------------~~s~~~~p~~~~aG~~~~VIDnSSa~Rm  102 (366)
T TIGR01745        75 ------------------DYTNEIYPKLRESGWQGYWIDAASSLRM  102 (366)
T ss_pred             ------------------HHHHHHHHHHHhCCCCeEEEECChhhhc
Confidence                              146678888889995  34444554433

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.23  E-value=0.0056  Score=45.07  Aligned_cols=103  Identities=21%  Similarity=0.346  Sum_probs=66.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEecc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRHD   89 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~D   89 (297)
                      .++|+|.| .|.+|+++++.|...|..++++++...-.....                      +.+....-+++.+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            47899999 689999999999999966888888764221111                      1111122244555555


Q ss_pred             cCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           90 VTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        90 l~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      +...    ...++|+||.+..                 +...-..+.+.|++.++++|+.+....+|
T Consensus        81 ~~~~~~~~~~~~~d~vi~~~d-----------------~~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   81 IDEENIEELLKDYDIVIDCVD-----------------SLAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             CSHHHHHHHHHTSSEEEEESS-----------------SHHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             cccccccccccCCCEEEEecC-----------------CHHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            5322    2347999998762                 13345567789999999999888765443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.21  E-value=0.00086  Score=56.26  Aligned_cols=77  Identities=10%  Similarity=0.104  Sum_probs=50.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC--CCccchhhhcCC--CceEEEecccCCc-----ccCCcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRKWIGH--PRFELIRHDVTEP-----LLIEVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~--~~~~~~~~~~~~--~~~~~~~~Dl~~~-----~~~~~d~  100 (297)
                      ..+++++|+|| |.+|++++..|.+.|..+|+++.|+..  .+.+.+.+.+..  ..+.....|+.+.     .....|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            45789999998 899999999999999446999999752  122222222211  2334445666543     2235799


Q ss_pred             EEEccCC
Q 022414          101 IYHLACP  107 (297)
Q Consensus       101 vi~~a~~  107 (297)
                      +||+...
T Consensus       203 lINaTp~  209 (289)
T PRK12548        203 LVNATLV  209 (289)
T ss_pred             EEEeCCC
Confidence            9998643

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.17  E-value=0.003  Score=50.01  Aligned_cols=105  Identities=19%  Similarity=0.244  Sum_probs=67.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc----------------------chhhhcCCCceEEEe
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIR   87 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~   87 (297)
                      ....+|+|.| .|.+|+++++.|...|-.++++++...-....                      .+.+....-.++.+.
T Consensus        19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            3568999999 78999999999999996689988886321111                      111111112333333


Q ss_pred             cccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        88 ~Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      .++...    ...++|+||.+..                 |...-..+.+.|++.++++|+.+....+|
T Consensus        98 ~~i~~~~~~~~~~~~D~Vi~~~d-----------------~~~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356        98 ERVTAENLELLINNVDLVLDCTD-----------------NFATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             hcCCHHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            333322    2457999998752                 12334457788899999999887655444

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=97.16  E-value=0.0053  Score=51.08  Aligned_cols=105  Identities=14%  Similarity=0.217  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc----------------------chhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~~   88 (297)
                      ...+|||.| .|.+|.++++.|...|-.++++.+...-...+                      .+.++...-+++....
T Consensus        18 ~~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~   96 (286)
T cd01491          18 QKSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTG   96 (286)
T ss_pred             hcCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEec
Confidence            468899999 57899999999999997788888765322111                      1112222224555555


Q ss_pred             ccCCcccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecC
Q 022414           89 DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (297)
Q Consensus        89 Dl~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~  153 (297)
                      ++....+.++|+||.+..                 +......+-++|++.+++||...+.+.+|.
T Consensus        97 ~~~~~~l~~fdvVV~~~~-----------------~~~~~~~in~~c~~~~ipfI~a~~~G~~G~  144 (286)
T cd01491          97 PLTTDELLKFQVVVLTDA-----------------SLEDQLKINEFCHSPGIKFISADTRGLFGS  144 (286)
T ss_pred             cCCHHHHhcCCEEEEecC-----------------CHHHHHHHHHHHHHcCCEEEEEeccccEEE
Confidence            544445567998887652                 233455677899999999999888776553

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.09  E-value=0.0058  Score=49.43  Aligned_cols=105  Identities=19%  Similarity=0.205  Sum_probs=66.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEe
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR   87 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~   87 (297)
                      ....+|+|.| .|.+|+++++.|...|-.++++++...-.....                      +.+....-+++.+.
T Consensus        19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            3468999999 789999999999999966888887653211111                      11111112344444


Q ss_pred             cccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        88 ~Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      .++...    ...++|+||.|..                 |...-..+.++|.+.++++|+.+....+|
T Consensus        98 ~~i~~~~~~~~~~~~DvVi~~~d-----------------~~~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757          98 ERLDAENAEELIAGYDLVLDCTD-----------------NFATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             ceeCHHHHHHHHhCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            444221    2346999998763                 12233467788899999888876655433

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.06  E-value=0.006  Score=49.18  Aligned_cols=68  Identities=19%  Similarity=0.372  Sum_probs=51.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------cCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------LIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------~~~~d~vi~~a  105 (297)
                      |+++|.| .|.+|..+++.|.+.| ++|++++++...    ...... ......+.+|-++..      ..++|+++-+.
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g-~~Vv~Id~d~~~----~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t   74 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEG-HNVVLIDRDEER----VEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAAT   74 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCC-CceEEEEcCHHH----HHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEee
Confidence            7889998 6999999999999999 999999985432    222222 246778888888763      34699998765


Q ss_pred             C
Q 022414          106 C  106 (297)
Q Consensus       106 ~  106 (297)
                      +
T Consensus        75 ~   75 (225)
T COG0569          75 G   75 (225)
T ss_pred             C
Confidence            4

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.05  E-value=0.0089  Score=48.86  Aligned_cols=102  Identities=17%  Similarity=0.127  Sum_probs=65.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEe
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR   87 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~   87 (297)
                      ....+|+|.|+ |.+|+++++.|...|-.++++++...-.....                      +.+....-+++.+.
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~  108 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN  108 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            35789999997 99999999999999966888887763221111                      11111222344444


Q ss_pred             cccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus        88 ~Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      ..+...    ...++|+||.+.-                 |...-..+-++|.+.++++|+.++..
T Consensus       109 ~~i~~~~~~~~~~~~DiVi~~~D-----------------~~~~r~~ln~~~~~~~ip~v~~~~~g  157 (245)
T PRK05690        109 ARLDDDELAALIAGHDLVLDCTD-----------------NVATRNQLNRACFAAKKPLVSGAAIR  157 (245)
T ss_pred             ccCCHHHHHHHHhcCCEEEecCC-----------------CHHHHHHHHHHHHHhCCEEEEeeecc
Confidence            444332    2357999998762                 12233457788899999988865543

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=97.03  E-value=0.003  Score=52.90  Aligned_cols=83  Identities=16%  Similarity=0.170  Sum_probs=54.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIF  112 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~~  112 (297)
                      -||.|.|||||.|.+|++.|.++...++..+.-...              ++  ..|. +....++|++|.+....    
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~--------------~~--~~~~-~~~~~~~D~vFlalp~~----   60 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR--------------KD--AAER-AKLLNAADVAILCLPDD----   60 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc--------------cC--cCCH-hHhhcCCCEEEECCCHH----
Confidence            479999999999999999999987566666543211              00  0011 11224689999876311    


Q ss_pred             cccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414          113 YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus       113 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                                    ....++..+.+.|+++|=.|+..-
T Consensus        61 --------------~s~~~~~~~~~~g~~VIDlSadfR   84 (310)
T TIGR01851        61 --------------AAREAVSLVDNPNTCIIDASTAYR   84 (310)
T ss_pred             --------------HHHHHHHHHHhCCCEEEECChHHh
Confidence                          244555566677889888887653

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.01  E-value=0.011  Score=46.93  Aligned_cols=90  Identities=11%  Similarity=0.081  Sum_probs=64.7

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ...+++|+|.| .|-+|..-++.|++.| ..|++++...   .+.+..+....++.++..++....+.+++.||-+-+. 
T Consensus         6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~g-a~VtVvsp~~---~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d-   79 (205)
T TIGR01470         6 NLEGRAVLVVG-GGDVALRKARLLLKAG-AQLRVIAEEL---ESELTLLAEQGGITWLARCFDADILEGAFLVIAATDD-   79 (205)
T ss_pred             EcCCCeEEEEC-cCHHHHHHHHHHHHCC-CEEEEEcCCC---CHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCC-
Confidence            35689999999 5999999999999999 8999887642   2344444444578898888876667788887754321 


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                              +    .    ....+...|++.++
T Consensus        80 --------~----~----ln~~i~~~a~~~~i   95 (205)
T TIGR01470        80 --------E----E----LNRRVAHAARARGV   95 (205)
T ss_pred             --------H----H----HHHHHHHHHHHcCC
Confidence                    1    1    23467778877775

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.99  E-value=0.0055  Score=51.32  Aligned_cols=105  Identities=10%  Similarity=0.067  Sum_probs=66.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCe---EEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .++|.| ||||-+|+.+++.|.+++ +.   +.++..........+  .+  .+-++..-++.+..+.++|+++. +|..
T Consensus         3 ~~~iAi-GATg~VG~~~l~~Leer~-fpv~~l~l~~s~~~s~gk~i--~f--~g~~~~V~~l~~~~f~~vDia~f-ag~~   75 (322)
T PRK06901          3 TLNIAI-AAEFELSEKLLEALEQSD-LEIEQISIVEIEPFGEEQGI--RF--NNKAVEQIAPEEVEWADFNYVFF-AGKM   75 (322)
T ss_pred             cceEEE-ecCcHHHHHHHHHHHhcC-CchhheeecccccccCCCEE--EE--CCEEEEEEECCccCcccCCEEEE-cCHH
Confidence            368999 999999999999999987 53   334333200111000  01  12334444666667789999998 6521


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCC
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                                        .....+..+.+.|+.+|=-||.+-+..+-+..++|
T Consensus        76 ------------------~s~~~ap~a~~aG~~VIDnSsa~Rmd~dVPLVVPE  110 (322)
T PRK06901         76 ------------------AQAEHLAQAAEAGCIVIDLYGICAALANVPVVVPS  110 (322)
T ss_pred             ------------------HHHHHHHHHHHCCCEEEECChHhhCCCCCCeeccc
Confidence                              35566667888999888888877655443333333

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.99  E-value=0.0048  Score=52.38  Aligned_cols=34  Identities=24%  Similarity=0.227  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .|+|.|+| .|.+|..++..|+++| ++|++.+|+.
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G-~~V~v~d~~~   35 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAG-HEVRLWDADP   35 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCC-CeeEEEeCCH
Confidence            36899999 8999999999999999 9999999974

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.86  E-value=0.0052  Score=59.80  Aligned_cols=73  Identities=21%  Similarity=0.272  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCe-------------EEEEecCCCCCccchhhhcCCCceEEEecccCCcc---
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNE-------------VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL---   94 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---   94 (297)
                      .+++|+|+|+ |++|+.+++.|.+....+             |.+.+++... .+.+....  +++..++.|+.|..   
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~-a~~la~~~--~~~~~v~lDv~D~e~L~  643 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKD-AKETVEGI--ENAEAVQLDVSDSESLL  643 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHH-HHHHHHhc--CCCceEEeecCCHHHHH
Confidence            4789999996 999999999998864333             5555543211 11222211  35667788776642   


Q ss_pred             --cCCcCEEEEccCC
Q 022414           95 --LIEVDQIYHLACP  107 (297)
Q Consensus        95 --~~~~d~vi~~a~~  107 (297)
                        ..++|+|+++...
T Consensus       644 ~~v~~~DaVIsalP~  658 (1042)
T PLN02819        644 KYVSQVDVVISLLPA  658 (1042)
T ss_pred             HhhcCCCEEEECCCc
Confidence              2469999998753

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.85  E-value=0.013  Score=49.43  Aligned_cols=109  Identities=18%  Similarity=0.160  Sum_probs=72.2

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccc---hhhhcCC-CceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~---~~~~~~~-~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      |.|.|+ |.+|..++..|+..|. .++++++++.......   +...... ........+- ...+.++|+||.++|...
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~   78 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR   78 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence            468885 8899999999998874 5799999865332211   1111111 1122222111 236778999999998643


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                        ....+..+.+..|+...+.+++.+++.+-  .++.+|-
T Consensus        79 --~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          79 --KPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence              23456677888999999999999988764  5665553

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.85  E-value=0.018  Score=46.83  Aligned_cols=105  Identities=14%  Similarity=0.116  Sum_probs=65.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccch----------------------hhhcCCCceEEEe
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----------------------RKWIGHPRFELIR   87 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~----------------------~~~~~~~~~~~~~   87 (297)
                      ....+|+|.| .|.+|+.+++.|...|-.++++++...-......                      .+....-.++.+.
T Consensus        22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            3468999999 6899999999999999778888887643221111                      1111111233333


Q ss_pred             cccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        88 ~Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      ..+...    ...++|+||.+.-                 |...-..+-++|.+.++++|+.++...+|
T Consensus       101 ~~i~~~~~~~~~~~~DlVvd~~D-----------------~~~~r~~ln~~~~~~~ip~v~~~~~g~~G  152 (240)
T TIGR02355       101 AKLDDAELAALIAEHDIVVDCTD-----------------NVEVRNQLNRQCFAAKVPLVSGAAIRMEG  152 (240)
T ss_pred             ccCCHHHHHHHhhcCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEEecccEe
Confidence            333221    2346888888762                 12234556788999999999876655444

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.83  E-value=0.0095  Score=53.96  Aligned_cols=76  Identities=20%  Similarity=0.120  Sum_probs=51.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+++|+|+|+ |.+|.++++.|.+.| .+|+++++............+...++.+...+-.. ...++|.||...|..
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G-~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELG-ARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSPGWR   89 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECCCcC
Confidence            34789999995 889999999999999 89999886543222222233434466665443322 335689999877754

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.78  E-value=0.0035  Score=52.14  Aligned_cols=74  Identities=19%  Similarity=0.305  Sum_probs=48.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+++++|+|+ |.+|++++..|.+.| .+|++.+|+..+.. .+.+.+.. ..+...  ++.+....++|+|||+.+..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g-~~v~v~~R~~~~~~-~la~~~~~~~~~~~~--~~~~~~~~~~DivInatp~g  189 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKAD-CNVIIANRTVSKAE-ELAERFQRYGEIQAF--SMDELPLHRVDLIINATSAG  189 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHhhcCceEEe--chhhhcccCccEEEECCCCC
Confidence            34689999997 899999999999999 79999988643322 22222211 112222  22222334689999998653

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=96.78  E-value=0.01  Score=51.04  Aligned_cols=96  Identities=15%  Similarity=0.170  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---------------CCCceEEEecccCCcccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---------------GHPRFELIRHDVTEPLLI   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~~~~~~   96 (297)
                      ++||.|.|. |.||+.+++.+.++...+++++..........+....               ...++. +..++ +....
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~-V~~~~-~el~~   77 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIP-VAGTI-EDLLE   77 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceE-EcCCh-hHhhc
Confidence            478999998 9999999999987755788887753321111111100               000111 11222 22234


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecc
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~  148 (297)
                      ++|+|+.|.+..                  .....+..+.+.|+++|+.++.
T Consensus        78 ~vDVVIdaT~~~------------------~~~e~a~~~~~aGk~VI~~~~~  111 (341)
T PRK04207         78 KADIVVDATPGG------------------VGAKNKELYEKAGVKAIFQGGE  111 (341)
T ss_pred             cCCEEEECCCch------------------hhHHHHHHHHHCCCEEEEcCCC
Confidence            799999987532                  2456667788889887777663

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.78  E-value=0.026  Score=46.69  Aligned_cols=110  Identities=17%  Similarity=0.116  Sum_probs=72.0

Q ss_pred             EEEEcCCchhHHHHHHHHHhcC--C-CeEEEEecCCCCCccc---hhhhcCCC-ceEEEecccCCcccCCcCEEEEccCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENE--K-NEVIVVDNYFTGSKDN---LRKWIGHP-RFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g--~-~~v~~~~r~~~~~~~~---~~~~~~~~-~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      |.|+||+|.+|..++..|+..+  . .++.+++.+.......   +....... ..++...+-...++.++|+|+.+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799999999999999998876  3 5889998865332221   11111111 12222222123567899999999986


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ...  ......+....|+...+.+++.+++..-  .++.+|
T Consensus        81 ~~~--~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          81 GRK--PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            543  2344556778899999999999988764  555554

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK08328 hypothetical protein; Provisional

Probab=96.75  E-value=0.01  Score=48.03  Aligned_cols=105  Identities=18%  Similarity=0.252  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc-----------------------hhhhcCCCceEEEe
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-----------------------LRKWIGHPRFELIR   87 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-----------------------~~~~~~~~~~~~~~   87 (297)
                      .+.+|+|.| .|.+|+++++.|...|-.++++++...-.....                       +......-.++...
T Consensus        26 ~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~  104 (231)
T PRK08328         26 KKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV  104 (231)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence            468899999 688999999999999977888887653211100                       01111111233333


Q ss_pred             cccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecC
Q 022414           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (297)
Q Consensus        88 ~Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~  153 (297)
                      ..+...    .+.++|+||.+.-                 |...-..+-++|++.++++|+.++...+|.
T Consensus       105 ~~~~~~~~~~~l~~~D~Vid~~d-----------------~~~~r~~l~~~~~~~~ip~i~g~~~g~~G~  157 (231)
T PRK08328        105 GRLSEENIDEVLKGVDVIVDCLD-----------------NFETRYLLDDYAHKKGIPLVHGAVEGTYGQ  157 (231)
T ss_pred             ccCCHHHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence            333221    2346888887752                 122334556788999999998887766654

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.73  E-value=0.005  Score=52.64  Aligned_cols=98  Identities=16%  Similarity=0.101  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~a  105 (297)
                      .+.+|||+||+|.+|+..++.+...| ..++++..+..+.. .+.++.....+++...|+.+..     ..++|+|++..
T Consensus       142 ~g~~VLV~gaaGgVG~~aiQlAk~~G-~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~v  219 (326)
T COG0604         142 PGETVLVHGAAGGVGSAAIQLAKALG-ATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTV  219 (326)
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC-CcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECC
Confidence            38999999999999999999999999 56666665432222 3333332223444444444331     13699999988


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      |..                  .....++++++. -+++.++...
T Consensus       220 G~~------------------~~~~~l~~l~~~-G~lv~ig~~~  244 (326)
T COG0604         220 GGD------------------TFAASLAALAPG-GRLVSIGALS  244 (326)
T ss_pred             CHH------------------HHHHHHHHhccC-CEEEEEecCC
Confidence            632                  122344445444 4777776654

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.71  E-value=0.025  Score=45.15  Aligned_cols=105  Identities=19%  Similarity=0.236  Sum_probs=65.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc---------------------chhhhcCCCceEEEecc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---------------------NLRKWIGHPRFELIRHD   89 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---------------------~~~~~~~~~~~~~~~~D   89 (297)
                      ...+|+|.| .|.+|+.+++.|...|..++++++...-....                     .+......-+++.+...
T Consensus        27 ~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~  105 (212)
T PRK08644         27 KKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEK  105 (212)
T ss_pred             hCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeee
Confidence            468999999 59999999999999996678888886311110                     01111112233344433


Q ss_pred             cCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-CCeEEEEecceeecC
Q 022414           90 VTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GARILLTSTSEVYGD  153 (297)
Q Consensus        90 l~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~r~v~~Ss~~~~~~  153 (297)
                      +.+.    .+.++|+||.|.-                 |...-..+.+.|.+. ++++|+.+....++.
T Consensus       106 i~~~~~~~~~~~~DvVI~a~D-----------------~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~~  157 (212)
T PRK08644        106 IDEDNIEELFKDCDIVVEAFD-----------------NAETKAMLVETVLEHPGKKLVAASGMAGYGD  157 (212)
T ss_pred             cCHHHHHHHHcCCCEEEECCC-----------------CHHHHHHHHHHHHHhCCCCEEEeehhhccCC
Confidence            4332    2346899988741                 122334566788887 888998876555543

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.70  E-value=0.019  Score=47.58  Aligned_cols=33  Identities=21%  Similarity=0.450  Sum_probs=27.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      +||.|.|++|.+|+.+++.+.+....+++++..
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d   34 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE   34 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            799999999999999999998764377776544

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=96.68  E-value=0.044  Score=45.41  Aligned_cols=71  Identities=21%  Similarity=0.178  Sum_probs=42.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      +|||.|.|. |.+|+.+++.|.+....++.++..... ..+........ .+. +..|+.+. ..++|+|+.|++.
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~~~-~~~~~~~~~~~-~~~-~~~d~~~l-~~~~DvVve~t~~   71 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVPEH-SIDAVRRALGE-AVR-VVSSVDAL-PQRPDLVVECAGH   71 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEcCC-CHHHHhhhhcc-CCe-eeCCHHHh-ccCCCEEEECCCH
Confidence            479999997 999999999998874366666553221 11111111111 222 22333332 3569999999853

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.68  E-value=0.025  Score=47.77  Aligned_cols=101  Identities=15%  Similarity=0.279  Sum_probs=65.8

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEecccC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRHDVT   91 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~Dl~   91 (297)
                      +|+|.|+ |.+|.++++.|...|-.++++++...-.....                      +.++...-.++....++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899995 99999999999999977888888763221111                      111111224455555555


Q ss_pred             Cc-----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           92 EP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        92 ~~-----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      +.     -..++|+|+.+.-                 |...-..+-+.|.+.++.+|..++.+.+|
T Consensus        80 ~~~~~~~f~~~~DvVv~a~D-----------------n~~ar~~in~~c~~~~ip~I~~gt~G~~G  128 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALD-----------------NLAARRHVNKMCLAADVPLIESGTTGFLG  128 (312)
T ss_pred             CccchHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHCCCCEEEEecCccee
Confidence            42     2347899888651                 23445567788888999888887766544

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.68  E-value=0.0062  Score=54.67  Aligned_cols=67  Identities=22%  Similarity=0.375  Sum_probs=49.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi~~a  105 (297)
                      |+|+|+|+ |.+|+++++.|.+.| ++|++++++...    ........++.++.+|.++.      ...++|.++.+.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g-~~v~vid~~~~~----~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGEN-NDVTVIDTDEER----LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT   73 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CcEEEEECCHHH----HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence            68999997 999999999999999 999999885432    22221124678888888764      245688888765

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.66  E-value=0.029  Score=43.22  Aligned_cols=102  Identities=20%  Similarity=0.208  Sum_probs=61.9

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc---------------------chhhhcCCCceEEEecccCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---------------------NLRKWIGHPRFELIRHDVTE   92 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---------------------~~~~~~~~~~~~~~~~Dl~~   92 (297)
                      +|+|.| .|.+|+++++.|...|..++++++...-....                     .+.++...-+++.+...+..
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            589999 59999999999999995579998887411110                     01111112234444444433


Q ss_pred             c----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-CCeEEEEecceeecC
Q 022414           93 P----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GARILLTSTSEVYGD  153 (297)
Q Consensus        93 ~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~r~v~~Ss~~~~~~  153 (297)
                      .    .+.++|+||.+.-                 |...-..+.+.+.+. ++.+|+-+....++.
T Consensus        80 ~~~~~~l~~~DlVi~~~d-----------------~~~~r~~i~~~~~~~~~ip~i~~~~~~~~~~  128 (174)
T cd01487          80 NNLEGLFGDCDIVVEAFD-----------------NAETKAMLAESLLGNKNKPVVCASGMAGFGD  128 (174)
T ss_pred             hhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHHCCCCEEEEehhhccCC
Confidence            1    2457999998741                 122234566777666 888888766554443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.66  E-value=0.033  Score=44.95  Aligned_cols=102  Identities=12%  Similarity=0.141  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~   88 (297)
                      ...+|+|.| .|.+|+++++.|...|-.++++++...-.....                      +......-+++.+..
T Consensus        10 ~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~   88 (231)
T cd00755          10 RNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE   88 (231)
T ss_pred             hCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence            468899999 689999999999999977888888763211111                      111111123333443


Q ss_pred             ccCCc-----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414           89 DVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus        89 Dl~~~-----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      .++..     ...++|+||.+.-                 +...-..+.++|.+.++++|...+.+.
T Consensus        89 ~i~~~~~~~l~~~~~D~VvdaiD-----------------~~~~k~~L~~~c~~~~ip~I~s~g~g~  138 (231)
T cd00755          89 FLTPDNSEDLLGGDPDFVVDAID-----------------SIRAKVALIAYCRKRKIPVISSMGAGG  138 (231)
T ss_pred             ecCHhHHHHHhcCCCCEEEEcCC-----------------CHHHHHHHHHHHHHhCCCEEEEeCCcC
Confidence            33311     1235899998752                 123345678999999998887766543

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.64  E-value=0.012  Score=53.02  Aligned_cols=76  Identities=16%  Similarity=0.142  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .+++|+|+| .|..|.++++.|.+.| ++|.+.++............+...++.+...+.......++|.||...|..
T Consensus        13 ~~~~i~v~G-~G~sG~a~a~~L~~~G-~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi~   88 (458)
T PRK01710         13 KNKKVAVVG-IGVSNIPLIKFLVKLG-AKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSMR   88 (458)
T ss_pred             cCCeEEEEc-ccHHHHHHHHHHHHCC-CEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCCC
Confidence            368999999 6889999999999999 999999876432221111123334566655543323345789999876543

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.62  E-value=0.013  Score=51.13  Aligned_cols=103  Identities=20%  Similarity=0.201  Sum_probs=64.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC------------------Cccchhh----hcCCCceEEEe
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG------------------SKDNLRK----WIGHPRFELIR   87 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~------------------~~~~~~~----~~~~~~~~~~~   87 (297)
                      ..+.+|+|.| .|.+|+++++.|...|-.+++++++..-.                  +.+.+.+    ....-.+....
T Consensus       133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            3578999998 58899999999999996688988886211                  1111111    11111233333


Q ss_pred             cccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus        88 ~Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      ..+...    ...++|+||++..                 |...-..+-++|.+.++++|+.+....
T Consensus       212 ~~~~~~~~~~~~~~~D~Vv~~~d-----------------~~~~r~~ln~~~~~~~ip~i~~~~~g~  261 (376)
T PRK08762        212 ERVTSDNVEALLQDVDVVVDGAD-----------------NFPTRYLLNDACVKLGKPLVYGAVFRF  261 (376)
T ss_pred             ccCChHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccC
Confidence            333221    2357999998762                 112233567889999999988865543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.59  E-value=0.0059  Score=46.03  Aligned_cols=76  Identities=20%  Similarity=0.278  Sum_probs=47.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+++|+|+|+ |.+|..+++.|.+.|.+.|.+.+|+.....+ +.+.+....+.....|.. ....++|+||++....
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~Dvvi~~~~~~   92 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKA-LAERFGELGIAIAYLDLE-ELLAEADLIINTTPVG   92 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHH-HHHHHhhcccceeecchh-hccccCCEEEeCcCCC
Confidence            44689999997 9999999999999853788888886432222 111111111111112221 1246799999998644

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.58  E-value=0.04  Score=45.45  Aligned_cols=102  Identities=13%  Similarity=0.147  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc------------------hhh----hcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN------------------LRK----WIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~------------------~~~----~~~~~~~~~~~~   88 (297)
                      .+.+|+|.| .|.+|+++++.|...|-.++++++...-.....                  +.+    +...-.+..+..
T Consensus        29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~  107 (268)
T PRK15116         29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD  107 (268)
T ss_pred             cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec
Confidence            478999999 689999999999999977888888763211110                  011    111112333322


Q ss_pred             ccCCc----cc-CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414           89 DVTEP----LL-IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus        89 Dl~~~----~~-~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      -++..    .+ .++|+||.+..                 +...-..+.+.|++.++++|..++.+.
T Consensus       108 ~i~~e~~~~ll~~~~D~VIdaiD-----------------~~~~k~~L~~~c~~~~ip~I~~gGag~  157 (268)
T PRK15116        108 FITPDNVAEYMSAGFSYVIDAID-----------------SVRPKAALIAYCRRNKIPLVTTGGAGG  157 (268)
T ss_pred             ccChhhHHHHhcCCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEECCccc
Confidence            11111    11 35888888763                 122345688899999999987766553

>PRK08223 hypothetical protein; Validated

Probab=96.55  E-value=0.045  Score=45.49  Aligned_cols=104  Identities=13%  Similarity=0.050  Sum_probs=65.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEe
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR   87 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~   87 (297)
                      ....+|+|.| .|.+|+.+++.|...|--++.+++...-.....                      +.++...-+++.+.
T Consensus        25 L~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            3478999999 588999999999999977888888764221111                      11111222344444


Q ss_pred             cccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus        88 ~Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      ..++..    -..++|+|+.+.-.         +      +...-..+-++|.+.++.+|+.+...
T Consensus       104 ~~l~~~n~~~ll~~~DlVvD~~D~---------~------~~~~r~~ln~~c~~~~iP~V~~~~~g  154 (287)
T PRK08223        104 EGIGKENADAFLDGVDVYVDGLDF---------F------EFDARRLVFAACQQRGIPALTAAPLG  154 (287)
T ss_pred             cccCccCHHHHHhCCCEEEECCCC---------C------cHHHHHHHHHHHHHcCCCEEEEeccC
Confidence            444432    23478998875410         0      12234566788999999998875543

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.55  E-value=0.029  Score=48.56  Aligned_cols=103  Identities=16%  Similarity=0.073  Sum_probs=66.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEe
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIR   87 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~   87 (297)
                      ....+|+|.|+ |.+|+++++.|...|-.++++++...-.....                      +.+....-+++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            35689999995 89999999999999977888888764221111                      11111222344444


Q ss_pred             cccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus        88 ~Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      ..+...    ...++|+|+.+.-                 |...-..+-++|.+.++++|+.+....
T Consensus       105 ~~i~~~~~~~~~~~~DvVvd~~d-----------------~~~~r~~~n~~c~~~~ip~v~~~~~g~  154 (355)
T PRK05597        105 RRLTWSNALDELRDADVILDGSD-----------------NFDTRHLASWAAARLGIPHVWASILGF  154 (355)
T ss_pred             eecCHHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEecC
Confidence            444322    2457999998762                 122233466888999999988765544

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.49  E-value=0.032  Score=38.87  Aligned_cols=84  Identities=20%  Similarity=0.228  Sum_probs=55.6

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      +...+++|+|+|+ |-+|..=++.|++.| .+|++++...    +...     ..+.+..-++. ..+.+.+.||-+.+ 
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~g-A~v~vis~~~----~~~~-----~~i~~~~~~~~-~~l~~~~lV~~at~-   69 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAG-AKVTVISPEI----EFSE-----GLIQLIRREFE-EDLDGADLVFAATD-   69 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCT-BEEEEEESSE----HHHH-----TSCEEEESS-G-GGCTTESEEEE-SS-
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCC-CEEEEECCch----hhhh-----hHHHHHhhhHH-HHHhhheEEEecCC-
Confidence            3457899999996 999999999999999 9999998853    1111     34555555553 45677888885432 


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                                      +-.....+.+.|++.++
T Consensus        70 ----------------d~~~n~~i~~~a~~~~i   86 (103)
T PF13241_consen   70 ----------------DPELNEAIYADARARGI   86 (103)
T ss_dssp             -----------------HHHHHHHHHHHHHTTS
T ss_pred             ----------------CHHHHHHHHHHHhhCCE
Confidence                            11234567788887775

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.46  E-value=0.0052  Score=49.40  Aligned_cols=35  Identities=31%  Similarity=0.470  Sum_probs=32.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      |+|.|+||+|.+|+.++..|.+.| ++|.+.+|+..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G-~~V~v~~r~~~   35 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAG-NKIIIGSRDLE   35 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCC-CEEEEEEcCHH
Confidence            689999999999999999999999 99999888643

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.45  E-value=0.04  Score=49.49  Aligned_cols=70  Identities=23%  Similarity=0.294  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi~~  104 (297)
                      .+++|+|+|+ |.+|+.+++.|.+.| +.|++++++..... .+...  ..++.++.+|.++.      ...++|.|+-+
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~-~~v~vid~~~~~~~-~~~~~--~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~  304 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEG-YSVKLIERDPERAE-ELAEE--LPNTLVLHGDGTDQELLEEEGIDEADAFIAL  304 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCHHHHH-HHHHH--CCCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence            4699999997 999999999999999 99999987543211 11111  13577888998865      23468888865


Q ss_pred             c
Q 022414          105 A  105 (297)
Q Consensus       105 a  105 (297)
                      .
T Consensus       305 ~  305 (453)
T PRK09496        305 T  305 (453)
T ss_pred             C
Confidence            4

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.45  E-value=0.032  Score=47.21  Aligned_cols=107  Identities=14%  Similarity=0.112  Sum_probs=68.0

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc---hhhhcC--CCceEEE-ecccCCcccCCcCEEEEccCCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LRKWIG--HPRFELI-RHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~---~~~~~~--~~~~~~~-~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      |.|+|+ |.+|..++..|...+..+|++++++.......   +.....  .....+. ..|.  .++.++|+||.+++..
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~--~~l~dADiVIit~g~p   77 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY--EDIAGSDVVVITAGIP   77 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH--HHhCCCCEEEEecCCC
Confidence            568998 99999999999988822999999875422111   111110  0112222 1332  3578899999999854


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ..  ...+..+.+..|....+.+++.+.+..-  .++.+|
T Consensus        78 ~~--~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          78 RK--PGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             CC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            32  2344556667788888888888888664  445544

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.45  E-value=0.023  Score=47.94  Aligned_cols=106  Identities=14%  Similarity=0.109  Sum_probs=71.0

Q ss_pred             EEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcC-----CCceEEEecccCCcccCCcCEEEEccCCCCC
Q 022414           37 VTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG-----HPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (297)
Q Consensus        37 ItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~  110 (297)
                      |.| .|.+|..++..|+..+. .++.+++............+..     ...+.....|  -..+.++|+||.+||... 
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~--~~~~~daDivVitag~~r-   76 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGD--YSDCKDADLVVITAGAPQ-   76 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCC--HHHHCCCCEEEECCCCCC-
Confidence            356 59999999999988874 4799998854332222111111     1123333222  235678999999998643 


Q ss_pred             cccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                       ....+..+.+..|....+.+.+.+++.+-  .++.+|-
T Consensus        77 -k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        77 -KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence             23456778889999999999999988764  5666664

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.43  E-value=0.025  Score=50.09  Aligned_cols=112  Identities=10%  Similarity=0.062  Sum_probs=72.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhc---C-C--CeEEEEecCCC-CCccc----hhhhc-C-CCceEEEecccCCcccCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMEN---E-K--NEVIVVDNYFT-GSKDN----LRKWI-G-HPRFELIRHDVTEPLLIEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~---g-~--~~v~~~~r~~~-~~~~~----~~~~~-~-~~~~~~~~~Dl~~~~~~~~   98 (297)
                      .-+|+||||+|+||.+|+..+.+=   | .  -.+++++.... ...+.    +.... . ...+.... | ...++.++
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-~-~~ea~~da  200 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-D-LDVAFKDA  200 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-C-CHHHhCCC
Confidence            367999999999999999998652   2 1  24566665311 11111    11100 1 11233332 2 23467899


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEec
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTST  147 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss  147 (297)
                      |++|.++|...  ....+..+.++.|..-...+.+...+..   .+++.+.|
T Consensus       201 DvvIitag~pr--k~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         201 HVIVLLDDFLI--KEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             CEEEECCCCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            99999998643  3456788889999999999999998876   36666665

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.40  E-value=0.0093  Score=49.68  Aligned_cols=57  Identities=18%  Similarity=0.250  Sum_probs=44.2

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ....+++|+|.|++|.+|+.++..|++.| .+|++..|..    ..+..                 ...++|+||++.|
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~g-atVtv~~~~t----~~L~~-----------------~~~~aDIvI~AtG  211 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNAN-ATVTICHSRT----QNLPE-----------------LVKQADIIVGAVG  211 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCC-CEEEEEeCCc----hhHHH-----------------HhccCCEEEEccC
Confidence            45678999999999999999999999999 6888877621    11111                 1257899999886

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=96.38  E-value=0.066  Score=48.54  Aligned_cols=163  Identities=18%  Similarity=0.265  Sum_probs=98.3

Q ss_pred             CCCEEEEEcCC-chhHHHHHHHHHhcCCCeEEEEecCC-CCCccchhhhcC---C--CceEEEecccCCc----------
Q 022414           31 SNMRILVTGGA-GFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIG---H--PRFELIRHDVTEP----------   93 (297)
Q Consensus        31 ~~~~ilItGat-G~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~~~~~~~---~--~~~~~~~~Dl~~~----------   93 (297)
                      .++-++||||+ |-||.++++.|++-| .+|+++..+- ....+-.+.++.   .  ..+-++-++..+.          
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gG-AtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI  473 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGG-ATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI  473 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCC-cEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence            47889999987 899999999999999 8888876542 222222222221   1  1233444444332          


Q ss_pred             ----------------ccCCcCEEEEccCCCCCccc-ccC--hhhhHHHhHHHHHHHHHHHHHcC----C--e--EEEEe
Q 022414           94 ----------------LLIEVDQIYHLACPASPIFY-KYN--PVKTIKTNVIGTLNMLGLAKRVG----A--R--ILLTS  146 (297)
Q Consensus        94 ----------------~~~~~d~vi~~a~~~~~~~~-~~~--~~~~~~~n~~~~~~l~~~~~~~~----~--r--~v~~S  146 (297)
                                      ....+|.+|-.|++...... ...  .+...++-++..++++-.+++.+    +  |  +|.-.
T Consensus       474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPg  553 (866)
T COG4982         474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPG  553 (866)
T ss_pred             ccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecC
Confidence                            01137888888876543321 111  23345667777888888777765    2  3  44444


Q ss_pred             cceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHhC----CcEEEEeeccccCCCC
Q 022414          147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG----IEIRIARIFNTYGPRM  211 (297)
Q Consensus       147 s~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~ivrp~~v~G~~~  211 (297)
                      |..=                 -.+.....|+.+|...+..+..+..++.    +.+.-.+.|++-|.+.
T Consensus       554 SPNr-----------------G~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGL  605 (866)
T COG4982         554 SPNR-----------------GMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGL  605 (866)
T ss_pred             CCCC-----------------CccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccc
Confidence            4320                 1223346799999999999988775542    3444455666666554

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.36  E-value=0.014  Score=46.08  Aligned_cols=71  Identities=18%  Similarity=0.148  Sum_probs=45.6

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ....+|+|+|+|. |.+|+.+++.|.+.| ++|++.+++..    .........+...+  |..+....++|+++.+|.
T Consensus        24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G-~~Vvv~D~~~~----~~~~~~~~~g~~~v--~~~~l~~~~~Dv~vp~A~   94 (200)
T cd01075          24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEG-AKLIVADINEE----AVARAAELFGATVV--APEEIYSVDADVFAPCAL   94 (200)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEcCCHH----HHHHHHHHcCCEEE--cchhhccccCCEEEeccc
Confidence            3456899999996 799999999999999 99998877532    12111111122222  222222236899998873

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.33  E-value=0.033  Score=45.42  Aligned_cols=117  Identities=20%  Similarity=0.047  Sum_probs=68.8

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCC-CccchhhhcCCCceEEEe-cccCCcccCCcCEEEEc
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTG-SKDNLRKWIGHPRFELIR-HDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~d~vi~~  104 (297)
                      -...+-||.|+||.|.||+.|--.|..+.. .++.+.+-.... -..++-.......+.-+. .|-....+.+.|+|+.-
T Consensus        24 ~~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP  103 (345)
T KOG1494|consen   24 GSQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP  103 (345)
T ss_pred             cccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence            334578999999999999998776654421 222332222111 111111110011111111 12222356789999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ||...  ......++.+++|..-...+..++.+..-  ++.++|
T Consensus       104 AGVPR--KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  104 AGVPR--KPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             CCCCC--CCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            98653  45566778899999999999999988653  455554

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.32  E-value=0.011  Score=42.81  Aligned_cols=70  Identities=23%  Similarity=0.360  Sum_probs=38.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ....++|-|.|+ |-+|.+|.+.|.+.| +.|..+........+.....+.  ....  .++ .......|++|.+.
T Consensus         7 ~~~~l~I~iIGa-GrVG~~La~aL~~ag-~~v~~v~srs~~sa~~a~~~~~--~~~~--~~~-~~~~~~aDlv~iav   76 (127)
T PF10727_consen    7 QAARLKIGIIGA-GRVGTALARALARAG-HEVVGVYSRSPASAERAAAFIG--AGAI--LDL-EEILRDADLVFIAV   76 (127)
T ss_dssp             -----EEEEECT-SCCCCHHHHHHHHTT-SEEEEESSCHH-HHHHHHC--T--T-------T-TGGGCC-SEEEE-S
T ss_pred             CCCccEEEEECC-CHHHHHHHHHHHHCC-CeEEEEEeCCcccccccccccc--cccc--ccc-ccccccCCEEEEEe
Confidence            345699999996 999999999999999 8888876433333333333222  1211  122 22345688888765

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.32  E-value=0.0067  Score=47.49  Aligned_cols=67  Identities=22%  Similarity=0.201  Sum_probs=41.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ++..+||+|-||+.+++.|.+.| ++|++-.|+..+..+...+.+. +.+   .+---..+....|+||-..
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag-~eV~igs~r~~~~~~a~a~~l~-~~i---~~~~~~dA~~~aDVVvLAV   68 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAG-HEVIIGSSRGPKALAAAAAALG-PLI---TGGSNEDAAALADVVVLAV   68 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCC-CeEEEecCCChhHHHHHHHhhc-ccc---ccCChHHHHhcCCEEEEec
Confidence            44445559999999999999999 9999887765444433333322 111   1111112345688888654

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.30  E-value=0.047  Score=47.98  Aligned_cols=104  Identities=19%  Similarity=0.115  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccch----------------------hhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----------------------RKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~----------------------~~~~~~~~~~~~~~   88 (297)
                      ...+|+|.| .|.+|.++++.|...|--++++++...-......                      .++...-+++.+..
T Consensus        41 ~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  119 (392)
T PRK07878         41 KNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF  119 (392)
T ss_pred             hcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence            478999999 6889999999999999668888876532211111                      11111112333444


Q ss_pred             ccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        89 Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      .+...    .+.++|+|+.+..                 |...-..+-++|.+.++++|+.+....+|
T Consensus       120 ~i~~~~~~~~~~~~D~Vvd~~d-----------------~~~~r~~ln~~~~~~~~p~v~~~~~g~~G  170 (392)
T PRK07878        120 RLDPSNAVELFSQYDLILDGTD-----------------NFATRYLVNDAAVLAGKPYVWGSIYRFEG  170 (392)
T ss_pred             cCChhHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            44321    2346899988752                 22234456788899999999887766554

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.30  E-value=0.028  Score=42.48  Aligned_cols=69  Identities=16%  Similarity=0.207  Sum_probs=48.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ...+++|+|.| .|-+|...++.|++.| .+|++++.   ...+.+..+   ..+.+....+......+.|.||-+.
T Consensus        10 ~l~~~~vlVvG-GG~va~rka~~Ll~~g-a~V~VIsp---~~~~~l~~l---~~i~~~~~~~~~~dl~~a~lViaaT   78 (157)
T PRK06719         10 NLHNKVVVIIG-GGKIAYRKASGLKDTG-AFVTVVSP---EICKEMKEL---PYITWKQKTFSNDDIKDAHLIYAAT   78 (157)
T ss_pred             EcCCCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEEcC---ccCHHHHhc---cCcEEEecccChhcCCCceEEEECC
Confidence            45689999999 5999999999999999 99998853   222222221   2455655556555667788887643

>TIGR02130 dapB_plant dihydrodipicolinate reductase

Probab=96.28  E-value=0.033  Score=45.82  Aligned_cols=29  Identities=21%  Similarity=0.377  Sum_probs=26.0

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEE
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVV   63 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~   63 (297)
                      +|+|.|++|-+|+++++.+.+.+ .+++..
T Consensus         2 ~V~V~Ga~GkMG~~v~~av~~~~-~~Lv~~   30 (275)
T TIGR02130         2 QIMVNGCPGKMGKAVAEAADAAG-LEIVPT   30 (275)
T ss_pred             eEEEeCCCChHHHHHHHHHhcCC-CEEEee
Confidence            68999999999999999998877 888774

This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.24  E-value=0.058  Score=43.64  Aligned_cols=101  Identities=17%  Similarity=0.178  Sum_probs=64.9

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEecccC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRHDVT   91 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~Dl~   91 (297)
                      +|+|.| .|.+|.++++.|...|-.++++++...-.....                      +.+....-+++.+..++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            588998 789999999999999967888888763221111                      111111223445555553


Q ss_pred             Cc------ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           92 EP------LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        92 ~~------~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      +.      -..++|+|+.+.-                 |...-..+-+.|.+.++++|..++.+.+|
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D-----------------n~~aR~~ln~~c~~~~iplI~~g~~G~~G  129 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD-----------------NIIARRYVNGMLIFLIVPLIESGTEGFKG  129 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence            21      2356898888651                 34455567788888898888877765444

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.20  E-value=0.011  Score=53.36  Aligned_cols=71  Identities=14%  Similarity=0.178  Sum_probs=45.7

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEec-ccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH-DVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ...+++++|+|+ |.+|++++..|.+.| .+|.+.+|+.... +.+....   +...... ++.  ...++|+||+|...
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G-~~V~i~~R~~~~~-~~la~~~---~~~~~~~~~~~--~l~~~DiVInatP~  400 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAG-AELLIFNRTKAHA-EALASRC---QGKAFPLESLP--ELHRIDIIINCLPP  400 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCC-CEEEEEeCCHHHH-HHHHHHh---ccceechhHhc--ccCCCCEEEEcCCC
Confidence            345789999995 899999999999999 7998888754222 1222111   1111111 121  23578999998753

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.20  E-value=0.059  Score=46.89  Aligned_cols=102  Identities=20%  Similarity=0.258  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~   88 (297)
                      ...+|+|.| .|.+|.++++.|...|-.++++++...-.....                      +.++...-+++.+..
T Consensus        40 ~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~  118 (370)
T PRK05600         40 HNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE  118 (370)
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence            478999999 588999999999999966888888863211111                      111111123444444


Q ss_pred             ccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414           89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus        89 Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      .+...    .+.++|+||.|.-                 |...-..+-++|.+.++.+|+.+....
T Consensus       119 ~i~~~~~~~~~~~~DlVid~~D-----------------n~~~r~~in~~~~~~~iP~v~~~~~g~  167 (370)
T PRK05600        119 RLTAENAVELLNGVDLVLDGSD-----------------SFATKFLVADAAEITGTPLVWGTVLRF  167 (370)
T ss_pred             ecCHHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEecC
Confidence            44321    2457999998762                 233344566888999998887765443

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.19  E-value=0.0096  Score=52.48  Aligned_cols=76  Identities=12%  Similarity=0.139  Sum_probs=51.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      ..+++|+|.|+ |.+|+.+++.|.+.|..++++..|+... .+.+...+.  ....+..|-....+..+|+||++.+...
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~r-a~~La~~~~--~~~~~~~~~l~~~l~~aDiVI~aT~a~~  254 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEK-AQKITSAFR--NASAHYLSELPQLIKKADIIIAAVNVLE  254 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHH-HHHHHHHhc--CCeEecHHHHHHHhccCCEEEECcCCCC
Confidence            46799999996 9999999999999996689999986432 233333322  1233333322334567999999986544

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.18  E-value=0.013  Score=49.07  Aligned_cols=74  Identities=16%  Similarity=0.164  Sum_probs=47.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC--CceEEEecccCCcccCCcCEEEEcc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH--PRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ..+++++|+|+ |..|++++..|.+.|..+|++++|+..+.. .+...+..  ........+-......++|+|||+.
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~-~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaT  200 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAA-ALADELNARFPAARATAGSDLAAALAAADGLVHAT  200 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECC
Confidence            35689999995 779999999999999558999999653322 23222211  1223322221122346799999984

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=96.17  E-value=0.014  Score=49.79  Aligned_cols=99  Identities=12%  Similarity=0.031  Sum_probs=65.9

Q ss_pred             CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      .+++.+|++.|.++..... .......+.+.....+++++.    +.+. ++|.++|...                 ...
T Consensus       202 ~~i~t~is~LGsts~~a~~-s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~-----------------~~~  263 (410)
T PF08732_consen  202 DDIKTMISTLGSTSAQAKS-SKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNN-----------------NAI  263 (410)
T ss_pred             hhhhhheecCCCChhhccc-cccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCc-----------------chh
Confidence            3578899988876533211 111111344555566666665    5555 7999988653                 233


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCC
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN  212 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~  212 (297)
                      ....+|...|...|..+.......--.++|+|||-+.|...+
T Consensus       264 s~~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  264 SSMFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             hhhhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence            445679999999999987765432246899999999998876

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=96.17  E-value=0.12  Score=41.44  Aligned_cols=91  Identities=9%  Similarity=0.101  Sum_probs=64.9

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      +..++++|+|.| .|-++..=++.|++.| .+|++++..   -.+.+..+.....+++++.++....+.+++.||-+.. 
T Consensus        21 l~~~~~~VLVVG-GG~VA~RK~~~Ll~~g-A~VtVVap~---i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATd-   94 (223)
T PRK05562         21 LLSNKIKVLIIG-GGKAAFIKGKTFLKKG-CYVYILSKK---FSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATD-   94 (223)
T ss_pred             EECCCCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEEcCC---CCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCC-
Confidence            445689999999 4889999899999999 999998863   2334444444567889888877666778887776541 


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                                      +-.....+.+.|++.++
T Consensus        95 ----------------D~~vN~~I~~~a~~~~~  111 (223)
T PRK05562         95 ----------------DEKLNNKIRKHCDRLYK  111 (223)
T ss_pred             ----------------CHHHHHHHHHHHHHcCC
Confidence                            11234567777877664

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.15  E-value=0.043  Score=46.02  Aligned_cols=36  Identities=19%  Similarity=0.252  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG   69 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   69 (297)
                      .++|.|.|+ |.+|..++..|+..| ++|++.++++..
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G-~~V~l~d~~~~~   40 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAG-VDVLVFETTEEL   40 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCC-CEEEEEECCHHH
Confidence            468999995 999999999999999 999999997643

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=96.13  E-value=0.088  Score=43.07  Aligned_cols=93  Identities=16%  Similarity=0.193  Sum_probs=55.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC--CeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      .+||.|.| .|.||+.+++.|.+.+.  .++..+.+......+.+.   .  ... +..|+.+....++|.|+-||+.. 
T Consensus         2 ~~rvgiIG-~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~---~--~~~-~~~~l~~ll~~~~DlVVE~A~~~-   73 (267)
T PRK13301          2 THRIAFIG-LGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALA---G--RVA-LLDGLPGLLAWRPDLVVEAAGQQ-   73 (267)
T ss_pred             ceEEEEEC-ccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhh---c--cCc-ccCCHHHHhhcCCCEEEECCCHH-
Confidence            37899999 89999999999876532  566666654322222221   1  111 12234333456799999999632 


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                                       +.......+-+.|+.++..|-..
T Consensus        74 -----------------av~e~~~~iL~~g~dlvv~SvGA   96 (267)
T PRK13301         74 -----------------AIAEHAEGCLTAGLDMIICSAGA   96 (267)
T ss_pred             -----------------HHHHHHHHHHhcCCCEEEEChhH
Confidence                             34445555555666666665433

>TIGR01408 Ube1 ubiquitin-activating enzyme E1

Probab=96.12  E-value=0.018  Score=56.36  Aligned_cols=104  Identities=12%  Similarity=0.111  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc----------------------chhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~~   88 (297)
                      ...+|||.|. |.+|.++++.|...|-..+++++...-...+                      .+.++...-.++....
T Consensus        23 ~~s~VLIiG~-gGLG~EiaKnL~laGVg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~  101 (1008)
T TIGR01408        23 AKSNVLISGM-GGLGLEIAKNLVLAGVKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNPYVHVSSSSV  101 (1008)
T ss_pred             hhCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCCCceEEEecc
Confidence            4688999995 6699999999999997788888765321111                      1112222223445555


Q ss_pred             ccCCcccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC--CeEEEEecceeec
Q 022414           89 DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTSEVYG  152 (297)
Q Consensus        89 Dl~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~r~v~~Ss~~~~~  152 (297)
                      ++...-+.++|+||.+..                 +......+-++|++.+  +.||+.++.+.+|
T Consensus       102 ~l~~e~l~~fdvVV~t~~-----------------~~~~~~~in~~cr~~~~~I~fI~~~~~G~~G  150 (1008)
T TIGR01408       102 PFNEEFLDKFQCVVLTEM-----------------SLPLQKEINDFCHSQCPPIAFISADVRGLFG  150 (1008)
T ss_pred             cCCHHHHcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCeEEEEEeecceEE
Confidence            554445568999998531                 2334557889999999  7899887776655

This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.11  E-value=0.015  Score=56.21  Aligned_cols=155  Identities=13%  Similarity=0.126  Sum_probs=97.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc--cchhhhcCCCceEEEecccCCc--------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWIGHPRFELIRHDVTEP--------------   93 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~--------------   93 (297)
                      .+.+..+|+||-|..|-+|++-|..+|...+++.+|+.-+.-  ..........++.+ +.|..+.              
T Consensus      1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV-~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQV-QVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEE-EEecccchhhhhHHHHHHHhh
Confidence            456899999999999999999999999778888888753321  22222233345543 3333322              


Q ss_pred             ccCCcCEEEEccCCCCCc----ccccChhhhHHHhHHHHHHHHHHHHHcCC---eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           94 LLIEVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        94 ~~~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .+.-+-.|||+|......    ...+++++..+.-+.++.++=+.-++.--   -||.+||.+.=.              
T Consensus      1845 kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGR-------------- 1910 (2376)
T KOG1202|consen 1845 KLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGR-------------- 1910 (2376)
T ss_pred             hcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccC--------------
Confidence            112366788888654321    23344555566677777777666655432   478888866311              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR  202 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivr  202 (297)
                        .-...+.||.+..+.|+++++.... |++-+.+.
T Consensus      1911 --GN~GQtNYG~aNS~MERiceqRr~~-GfPG~AiQ 1943 (2376)
T KOG1202|consen 1911 --GNAGQTNYGLANSAMERICEQRRHE-GFPGTAIQ 1943 (2376)
T ss_pred             --CCCcccccchhhHHHHHHHHHhhhc-CCCcceee
Confidence              1112255999999999999876543 55444444

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=96.10  E-value=0.041  Score=48.66  Aligned_cols=74  Identities=19%  Similarity=0.084  Sum_probs=53.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      +|+|+|.| -|--|.++++.|.+.| ..|++.+.+......... .....++.+..+...+.....+|.||-.=|+.
T Consensus         7 ~~kv~V~G-LG~sG~a~a~~L~~~G-~~v~v~D~~~~~~~~~~~-~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~   80 (448)
T COG0771           7 GKKVLVLG-LGKSGLAAARFLLKLG-AEVTVSDDRPAPEGLAAQ-PLLLEGIEVELGSHDDEDLAEFDLVVKSPGIP   80 (448)
T ss_pred             CCEEEEEe-cccccHHHHHHHHHCC-CeEEEEcCCCCccchhhh-hhhccCceeecCccchhccccCCEEEECCCCC
Confidence            89999999 7999999999999999 999999975544111111 12234666666655555566789999866654

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.09  E-value=0.013  Score=48.64  Aligned_cols=53  Identities=17%  Similarity=0.207  Sum_probs=41.6

Q ss_pred             cccccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh
Q 022414           22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW   77 (297)
Q Consensus        22 ~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~   77 (297)
                      |+-.+.+. +++++.|+|+.| +|+--++...+-| .+|++++++..++++.+..+
T Consensus       173 pLk~~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG-~rV~vis~~~~kkeea~~~L  225 (360)
T KOG0023|consen  173 PLKRSGLG-PGKWVGIVGLGG-LGHMAVQYAKAMG-MRVTVISTSSKKKEEAIKSL  225 (360)
T ss_pred             hhHHcCCC-CCcEEEEecCcc-cchHHHHHHHHhC-cEEEEEeCCchhHHHHHHhc
Confidence            44444555 789999999999 9988888887889 99999999876666665544

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.08  E-value=0.017  Score=44.11  Aligned_cols=57  Identities=14%  Similarity=0.215  Sum_probs=43.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ...+++|+|+|+++.+|..+++.|.++| .+|++..|..    +                |+ .....+.|+||.+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g-~~V~v~~r~~----~----------------~l-~~~l~~aDiVIsat~~   97 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRN-ATVTVCHSKT----K----------------NL-KEHTKQADIVIVAVGK   97 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCC-CEEEEEECCc----h----------------hH-HHHHhhCCEEEEcCCC
Confidence            3568999999997788999999999999 7898888742    1                11 1134578999987754

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.00  E-value=0.012  Score=52.33  Aligned_cols=66  Identities=26%  Similarity=0.268  Sum_probs=43.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |+|.|+||+|.+|+.+++.|.+.| ++|++.+|+..... ....   ..++.. ..|. .....++|+||.+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G-~~V~v~~r~~~~~~-~~a~---~~gv~~-~~~~-~e~~~~aDvVIlav   66 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKG-FEVIVTGRDPKKGK-EVAK---ELGVEY-ANDN-IDAAKDADIVIISV   66 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCC-CEEEEEECChHHHH-HHHH---HcCCee-ccCH-HHHhccCCEEEEec
Confidence            689999999999999999999999 89999998642211 1111   112221 1111 12345689988876

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.99  E-value=0.014  Score=48.73  Aligned_cols=76  Identities=12%  Similarity=0.013  Sum_probs=47.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEec-ccCCcccCCcCEEEEccCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRH-DVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~-Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ..+++++|.|+ |..|++++..|.+.|..+|+++.|+..+. +.+...+.. ..+..+.. +-......++|+|||+...
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka-~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKL-SRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCC
Confidence            35789999994 99999999999999966899999964332 223322211 11111110 1111233578999998754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.99  E-value=0.011  Score=49.62  Aligned_cols=70  Identities=14%  Similarity=0.099  Sum_probs=47.2

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ...+++++|+|. |.+|+.+++.|...| .+|++.+|+...    ..... ..+...+..+-......++|+||++.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G-~~V~v~~R~~~~----~~~~~-~~g~~~~~~~~l~~~l~~aDiVint~  217 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALG-ARVFVGARSSAD----LARIT-EMGLIPFPLNKLEEKVAEIDIVINTI  217 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCC-CEEEEEeCCHHH----HHHHH-HCCCeeecHHHHHHHhccCCEEEECC
Confidence            446899999996 889999999999999 899999986432    11111 11223222222223456899999976

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK13535 erythrose 4-phosphate dehydrogenase; Provisional

Probab=95.93  E-value=0.083  Score=45.08  Aligned_cols=99  Identities=20%  Similarity=0.293  Sum_probs=57.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhh----------------------cCCCceEEEec
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKW----------------------IGHPRFELIRH   88 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~----------------------~~~~~~~~~~~   88 (297)
                      ++||.|.|. |.||+.+.+.|.+++. .++.++.-+.....+.+.-+                      .....+.+.+.
T Consensus         1 ~~~IaInGf-GrIGR~~lr~l~e~~~~~~l~vvaind~~~~~~~ayll~ydS~hg~~~~~v~~~~~~l~v~g~~i~v~~~   79 (336)
T PRK13535          1 TIRVAINGF-GRIGRNVLRALYESGRRAEITVVAINELADAEGMAHLLKYDTSHGRFAWDVRQERDQLFVGDDAIRLLHE   79 (336)
T ss_pred             CeEEEEECc-CHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHhhhccCCCCCCCcEEecCCEEEECCEEEEEEEc
Confidence            368999999 9999999999998631 23444422211111111100                      11112333211


Q ss_pred             -ccCCccc--CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414           89 -DVTEPLL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus        89 -Dl~~~~~--~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                       |..+...  .++|+|+.|+|..                  ..+..+..+.+.|++.|.+|+.+
T Consensus        80 ~~p~~~~w~~~gvDiVle~tG~~------------------~s~~~a~~~l~aGAk~V~iSap~  125 (336)
T PRK13535         80 RDIASLPWRELGVDVVLDCTGVY------------------GSREDGEAHIAAGAKKVLFSHPG  125 (336)
T ss_pred             CCcccCcccccCCCEEEEccchh------------------hhHHHHHHHHHcCCEEEEecCCc
Confidence             3332222  5899999999743                  24455556667899888888764

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.92  E-value=0.083  Score=47.37  Aligned_cols=74  Identities=20%  Similarity=0.183  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .+++|+|+|+ |..|.++++.|.++| +.|.+.+...... .+.+.+.  ..++.+..+...+....++|.||...|+.
T Consensus         4 ~~~~~~v~G~-g~~G~~~a~~l~~~g-~~v~~~d~~~~~~~~~~l~~~--~~gi~~~~g~~~~~~~~~~d~vv~spgi~   78 (445)
T PRK04308          4 QNKKILVAGL-GGTGISMIAYLRKNG-AEVAAYDAELKPERVAQIGKM--FDGLVFYTGRLKDALDNGFDILALSPGIS   78 (445)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEeCCCCchhHHHHhhc--cCCcEEEeCCCCHHHHhCCCEEEECCCCC
Confidence            4689999996 589999999999999 9999988754321 1111110  12566555543333335789999877654

>PRK07411 hypothetical protein; Validated

Probab=95.91  E-value=0.094  Score=46.03  Aligned_cols=104  Identities=15%  Similarity=0.090  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~   88 (297)
                      ...+|+|.| .|.+|.++++.|...|--++++++...-.....                      +.+....-+++.+..
T Consensus        37 ~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~  115 (390)
T PRK07411         37 KAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYET  115 (390)
T ss_pred             hcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEec
Confidence            478999999 588999999999999977888887763221111                      111111223444444


Q ss_pred             ccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        89 Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      .++..    ...++|+|+.|..                 |...-..+-++|.+.++++|+.+....+|
T Consensus       116 ~~~~~~~~~~~~~~D~Vvd~~d-----------------~~~~r~~ln~~~~~~~~p~v~~~~~g~~g  166 (390)
T PRK07411        116 RLSSENALDILAPYDVVVDGTD-----------------NFPTRYLVNDACVLLNKPNVYGSIFRFEG  166 (390)
T ss_pred             ccCHHhHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEccCEE
Confidence            44432    2357999998762                 22233446688888998888776555443

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.90  E-value=0.024  Score=47.16  Aligned_cols=75  Identities=17%  Similarity=0.187  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccC-CcCEEEEccCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-EVDQIYHLACP  107 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~-~~d~vi~~a~~  107 (297)
                      .+++++|.| +|..+++++..|++.|..+++++.|+..+ .+.+.+.+..........+..+.... ..|++||+...
T Consensus       125 ~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~r-a~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~  200 (283)
T COG0169         125 TGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRER-AEELADLFGELGAAVEAAALADLEGLEEADLLINATPV  200 (283)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHH-HHHHHHHhhhcccccccccccccccccccCEEEECCCC
Confidence            469999999 58899999999999996689999996543 33344433322211112222222222 58999998653

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.86  E-value=0.011  Score=45.13  Aligned_cols=65  Identities=22%  Similarity=0.210  Sum_probs=41.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ||+|.+.| .|-+|+.+++.|+++| ++|.+.+|+.    +...++.. .++..  ++-......++|+|+-+.
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g-~~v~~~d~~~----~~~~~~~~-~g~~~--~~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAG-YEVTVYDRSP----EKAEALAE-AGAEV--ADSPAEAAEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTT-TEEEEEESSH----HHHHHHHH-TTEEE--ESSHHHHHHHBSEEEE-S
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcC-CeEEeeccch----hhhhhhHH-hhhhh--hhhhhhHhhcccceEeec
Confidence            58999999 6999999999999999 9999999853    22222221 12222  222223345679999876

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.85  E-value=0.18  Score=35.72  Aligned_cols=64  Identities=25%  Similarity=0.407  Sum_probs=45.8

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEcc
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~a  105 (297)
                      |+|.|. |.+|+.+++.|.+.+ ..|++++++...    ..... ..++.++.+|.++..      ..+++.++-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~-~~vvvid~d~~~----~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGG-IDVVVIDRDPER----VEELR-EEGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTT-SEEEEEESSHHH----HHHHH-HTTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCC-CEEEEEECCcHH----HHHHH-hcccccccccchhhhHHhhcCccccCEEEEcc
Confidence            578885 789999999999976 799999985322    22222 245889999999873      34688888765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.84  E-value=0.085  Score=46.79  Aligned_cols=35  Identities=29%  Similarity=0.317  Sum_probs=31.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      .|+|.|.| .|++|..++..|.+.| ++|++.+++..
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G-~~V~~~D~~~~   37 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQ-KQVIGVDINQH   37 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCC-CEEEEEeCCHH
Confidence            48999998 7999999999999999 99999998653

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=95.82  E-value=0.074  Score=47.02  Aligned_cols=105  Identities=10%  Similarity=0.127  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc----------------------chhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~~   88 (297)
                      ...+|+|.|++| +|.++++.|.-.|-..+++++...-...+                      .+.++...-.++++..
T Consensus        19 ~~s~VlliG~gg-lGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~V~i~~~~e   97 (425)
T cd01493          19 ESAHVCLLNATA-TGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPDVNGSAVEE   97 (425)
T ss_pred             hhCeEEEEcCcH-HHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCCCEEEEEec
Confidence            468899999655 99999999999996688888765321111                      0111222223344433


Q ss_pred             ccCC------cccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecC
Q 022414           89 DVTE------PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (297)
Q Consensus        89 Dl~~------~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~  153 (297)
                      +..+      .-..++|+||.+..                 +......+.+.|.+.++++|+.+|.+.||.
T Consensus        98 ~~~~ll~~~~~f~~~fdiVI~t~~-----------------~~~~~~~L~~~c~~~~iPlI~~~s~G~~G~  151 (425)
T cd01493          98 SPEALLDNDPSFFSQFTVVIATNL-----------------PESTLLRLADVLWSANIPLLYVRSYGLYGY  151 (425)
T ss_pred             ccchhhhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEecccCEEE
Confidence            3321      11246777775321                 122344577899999999999999887763

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=95.77  E-value=0.15  Score=41.71  Aligned_cols=89  Identities=16%  Similarity=0.095  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-------ccCCcCEEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-------LLIEVDQIYH  103 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------~~~~~d~vi~  103 (297)
                      ++++|+|+|||+ =|+.|++.|.+.| +.|++..-.....       .....+....+-+.+.       ...++++||+
T Consensus         1 ~~~~IlvlgGT~-egr~la~~L~~~g-~~v~~Svat~~g~-------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VID   71 (248)
T PRK08057          1 MMPRILLLGGTS-EARALARALAAAG-VDIVLSLAGRTGG-------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVID   71 (248)
T ss_pred             CCceEEEEechH-HHHHHHHHHHhCC-CeEEEEEccCCCC-------cccCCceEEECCCCCHHHHHHHHHHCCCCEEEE
Confidence            368899999987 5899999999999 7776654433222       1123556666666332       2347999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEE
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v  143 (297)
                      +.-+.               ......++.++|++.++.++
T Consensus        72 ATHPf---------------A~~is~~a~~ac~~~~ipyi   96 (248)
T PRK08057         72 ATHPY---------------AAQISANAAAACRALGIPYL   96 (248)
T ss_pred             CCCcc---------------HHHHHHHHHHHHHHhCCcEE
Confidence            76322               13457788899999987544

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=95.77  E-value=0.086  Score=45.40  Aligned_cols=33  Identities=36%  Similarity=0.428  Sum_probs=31.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |||.|.| +||+|....-.|.+.| |+|++++...
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~G-HeVv~vDid~   33 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELG-HEVVCVDIDE   33 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcC-CeEEEEeCCH
Confidence            8999999 8999999999999999 9999999875

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.74  E-value=0.019  Score=48.75  Aligned_cols=73  Identities=21%  Similarity=0.293  Sum_probs=47.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ..+++|+|.|+ |-+|..+++.|...|...|++++|+.... ..+...+.   ...+..+-......++|+||.+.+.
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra-~~la~~~g---~~~~~~~~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA-EELAKELG---GNAVPLDELLELLNEADVVISATGA  248 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHcC---CeEEeHHHHHHHHhcCCEEEECCCC
Confidence            36899999996 99999999999987657898888854222 22222222   2233222112234578999998764

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.71  E-value=0.015  Score=49.96  Aligned_cols=78  Identities=19%  Similarity=0.171  Sum_probs=48.5

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCc----ccCCcCEEE
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEP----LLIEVDQIY  102 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~----~~~~~d~vi  102 (297)
                      -...++.|||.||+|.+|++.++.+...+ ...++..++.  ...++.+.+. ..-+++-..|+.+.    ...++|+|+
T Consensus       154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~-~~~v~t~~s~--e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVl  230 (347)
T KOG1198|consen  154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAG-AIKVVTACSK--EKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVL  230 (347)
T ss_pred             ccCCCCeEEEEeCCcHHHHHHHHHHHhcC-CcEEEEEccc--chHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEE
Confidence            34567899999999999999999998888 5555555532  2222233222 11223322223222    144799999


Q ss_pred             EccCCC
Q 022414          103 HLACPA  108 (297)
Q Consensus       103 ~~a~~~  108 (297)
                      .|+|..
T Consensus       231 D~vg~~  236 (347)
T KOG1198|consen  231 DCVGGS  236 (347)
T ss_pred             ECCCCC
Confidence            999753

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.71  E-value=0.064  Score=48.50  Aligned_cols=72  Identities=24%  Similarity=0.187  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .+++|+|.| .|..|.++++.|.+.| ..|.+.++.....    .+.....++.+....-......++|.||...|+.
T Consensus        14 ~~~~v~v~G-~G~sG~a~a~~L~~~G-~~V~~~D~~~~~~----~~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~   85 (473)
T PRK00141         14 LSGRVLVAG-AGVSGRGIAAMLSELG-CDVVVADDNETAR----HKLIEVTGVADISTAEASDQLDSFSLVVTSPGWR   85 (473)
T ss_pred             cCCeEEEEc-cCHHHHHHHHHHHHCC-CEEEEECCChHHH----HHHHHhcCcEEEeCCCchhHhcCCCEEEeCCCCC
Confidence            468899999 7889999999999999 8999988753221    1222223555554422222234689999877654

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.68  E-value=0.046  Score=48.81  Aligned_cols=73  Identities=16%  Similarity=0.165  Sum_probs=51.2

Q ss_pred             cCCCEEEEEcC----------------CchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc
Q 022414           30 QSNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP   93 (297)
Q Consensus        30 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   93 (297)
                      ..+++|+||+|                ||.+|.+|++++..+| .+|+++.-+..-.        ...+++.+..+-...
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~G-A~VtlI~Gp~~~~--------~p~~v~~i~V~ta~e  324 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAG-AEVTLISGPVDLA--------DPQGVKVIHVESARQ  324 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCC-CcEEEEeCCcCCC--------CCCCceEEEecCHHH
Confidence            57899999987                5889999999999999 9999987532110        012455554433322


Q ss_pred             ------ccCCcCEEEEccCCCCCc
Q 022414           94 ------LLIEVDQIYHLACPASPI  111 (297)
Q Consensus        94 ------~~~~~d~vi~~a~~~~~~  111 (297)
                            .....|++|++|+.....
T Consensus       325 M~~av~~~~~~Di~I~aAAVaDyr  348 (475)
T PRK13982        325 MLAAVEAALPADIAIFAAAVADWR  348 (475)
T ss_pred             HHHHHHhhCCCCEEEEecccccee
Confidence                  123479999999987643

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.65  E-value=0.38  Score=43.18  Aligned_cols=135  Identities=12%  Similarity=0.088  Sum_probs=75.3

Q ss_pred             ccccccccccCCCEEE----EEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccC
Q 022414           21 SPLRFSKFFQSNMRIL----VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI   96 (297)
Q Consensus        21 ~~~~~~~~~~~~~~il----ItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   96 (297)
                      .|.++....+ +..++    |+||+|.+|.++++.|...| .+|++..+.....                  +..  ...
T Consensus        24 ~~~~l~~~~~-~~~~~~~~~l~~~~~g~~~~~~~~~~~~g-~~v~~~~~~~~~~------------------~~~--~~~   81 (450)
T PRK08261         24 QPVPLRRYRP-GQPLLDGPVLVGGAGRLAEALAALLAGLG-YDVVANNDGGLTW------------------AAG--WGD   81 (450)
T ss_pred             CCccccCCCC-CCCCCCCceEEccCchhHHHHHHHHhhCC-CeeeecCcccccc------------------ccC--cCC
Confidence            3333333332 34566    88889999999999999999 9998876543211                  000  012


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChH
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (297)
                      +++.+++.+...      ..+++.. .-.......++.+.+ +-+||+++|.....                   ....|
T Consensus        82 ~~~~~~~d~~~~------~~~~~l~-~~~~~~~~~l~~l~~-~griv~i~s~~~~~-------------------~~~~~  134 (450)
T PRK08261         82 RFGALVFDATGI------TDPADLK-ALYEFFHPVLRSLAP-CGRVVVLGRPPEAA-------------------ADPAA  134 (450)
T ss_pred             cccEEEEECCCC------CCHHHHH-HHHHHHHHHHHhccC-CCEEEEEccccccC-------------------CchHH
Confidence            344333322111      1112211 111222223333322 23899998865421                   11248


Q ss_pred             HHhHHHHHHHHHHHHHHh--CCcEEEEeec
Q 022414          177 DEGKRVAETLMFDYHRQH--GIEIRIARIF  204 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~~--~~~~~ivrp~  204 (297)
                      ..+|...+.+.+.+.++.  ++....+.|+
T Consensus       135 ~~akaal~gl~rsla~E~~~gi~v~~i~~~  164 (450)
T PRK08261        135 AAAQRALEGFTRSLGKELRRGATAQLVYVA  164 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEecC
Confidence            999999999998888764  5666666664

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.58  E-value=0.035  Score=47.78  Aligned_cols=34  Identities=21%  Similarity=0.050  Sum_probs=30.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYF   67 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~   67 (297)
                      .+|+|.||+|.+|...++.+...| . +|++++++.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G-~~~Vi~~~~s~  190 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLG-CSRVVGICGSD  190 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcC-CCEEEEEcCCH
Confidence            899999999999999999988889 6 788887753

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.56  E-value=0.027  Score=47.41  Aligned_cols=69  Identities=16%  Similarity=0.097  Sum_probs=46.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ..+++++|+|. |.+|+.++..|.+.| .+|++.+|+..... ...    ..+...+..+.......++|+||++.
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~G-a~V~v~~r~~~~~~-~~~----~~G~~~~~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALG-ANVTVGARKSAHLA-RIT----EMGLSPFHLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCC-CEEEEEECCHHHHH-HHH----HcCCeeecHHHHHHHhCCCCEEEECC
Confidence            35799999995 889999999999999 89999998642211 111    12333333222223446799999975

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.53  E-value=0.03  Score=46.78  Aligned_cols=65  Identities=23%  Similarity=0.231  Sum_probs=42.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |+|.|.| .|.+|..++..|.+.| ++|.+.+|+....    ........+.....+.  ....++|+||.+.
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g-~~V~~~d~~~~~~----~~a~~~g~~~~~~~~~--~~~~~aDlVilav   65 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLG-HTVYGVSRRESTC----ERAIERGLVDEASTDL--SLLKDCDLVILAL   65 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCC-CEEEEEECCHHHH----HHHHHCCCcccccCCH--hHhcCCCEEEEcC
Confidence            5899998 8999999999999999 9999999854221    1111111111111121  1346789999876

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=95.53  E-value=0.046  Score=36.01  Aligned_cols=35  Identities=34%  Similarity=0.513  Sum_probs=30.9

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS   70 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~   70 (297)
                      +|+|.| .|++|-+++..|.+.| .+|+++.|.+.-.
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g-~~vtli~~~~~~~   35 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELG-KEVTLIERSDRLL   35 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTT-SEEEEEESSSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhC-cEEEEEeccchhh
Confidence            578888 6999999999999999 9999999987544

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.52  E-value=0.022  Score=49.69  Aligned_cols=38  Identities=16%  Similarity=0.303  Sum_probs=33.8

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ..+..++|.|.||.|.+|+.+++.|.+.| +.|++.+|+
T Consensus        94 ~~~~~~~I~IiGG~GlmG~slA~~l~~~G-~~V~~~d~~  131 (374)
T PRK11199         94 LNPDLRPVVIVGGKGQLGRLFAKMLTLSG-YQVRILEQD  131 (374)
T ss_pred             cCcccceEEEEcCCChhhHHHHHHHHHCC-CeEEEeCCC
Confidence            33456899999999999999999999999 999999984

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.50  E-value=0.11  Score=41.16  Aligned_cols=68  Identities=22%  Similarity=0.356  Sum_probs=39.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      |+|.|.| .|.||..+++.+.+. ...+..++......+...+.........    .|+.+.. .++|.++-||+
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~----s~ide~~-~~~DlvVEaAS   69 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCV----SDIDELI-AEVDLVVEAAS   69 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCcc----ccHHHHh-hccceeeeeCC
Confidence            5788998 899999999988755 1266666655433332222222221111    3333332 56788888774

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=95.49  E-value=0.13  Score=43.83  Aligned_cols=95  Identities=17%  Similarity=0.214  Sum_probs=56.0

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcC---CCeEEEEecCCCCCccchhhhc----------------------CCCceEEEec
Q 022414           34 RILVTGGAGFIGSHLVDKLMENE---KNEVIVVDNYFTGSKDNLRKWI----------------------GHPRFELIRH   88 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g---~~~v~~~~r~~~~~~~~~~~~~----------------------~~~~~~~~~~   88 (297)
                      +|.|.|. |.||+.+++.|.+++   ..+|..+.-...  .+.+.-++                      ....+.+.+.
T Consensus         1 ~IaInGf-GrIGR~vlr~l~e~~~~~~~~vvaInd~~~--~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~   77 (325)
T TIGR01532         1 RVAINGF-GRIGRNVLRALYESGERLGIEVVALNELAD--QASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHS   77 (325)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCCeEEEEEecCCC--HHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEc
Confidence            5889998 999999999998763   257766654221  11111010                      0112222211


Q ss_pred             -ccCCc--ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414           89 -DVTEP--LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus        89 -Dl~~~--~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                       |..+.  ...++|+|+.|+|...                  ....+..+.+.|++.|.+|+..
T Consensus        78 ~~p~~~~w~~~gvDiVie~tG~~~------------------s~e~a~~~l~aGa~~V~~SaP~  123 (325)
T TIGR01532        78 PTPEALPWRALGVDLVLDCTGVYG------------------NREQGERHIRAGAKRVLFSHPG  123 (325)
T ss_pred             CChhhccccccCCCEEEEccchhc------------------cHHHHHHHHHcCCeEEEecCCC
Confidence             22222  2258999999997542                  3345556667898888888763

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.49  E-value=0.028  Score=49.84  Aligned_cols=74  Identities=18%  Similarity=0.347  Sum_probs=48.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+++|+|+|+ |-+|..+++.|.+.|..+|++.+|+.... ..+...+.   ...+..+-......++|+||.+.+..
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra-~~la~~~g---~~~i~~~~l~~~l~~aDvVi~aT~s~  251 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERA-EDLAKELG---GEAVKFEDLEEYLAEADIVISSTGAP  251 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHcC---CeEeeHHHHHHHHhhCCEEEECCCCC
Confidence            46799999996 99999999999998867899998864321 22222221   12222221223345799999987543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=95.48  E-value=0.026  Score=51.60  Aligned_cols=36  Identities=19%  Similarity=0.300  Sum_probs=31.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..+++++|+|+ |.+|++++..|.+.| .+|+++.|+.
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G-~~V~i~nR~~  412 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKG-ARVVIANRTY  412 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCC-CEEEEEcCCH
Confidence            45789999998 899999999999999 6999998853

>PLN00203 glutamyl-tRNA reductase

Probab=95.45  E-value=0.026  Score=51.15  Aligned_cols=77  Identities=21%  Similarity=0.265  Sum_probs=49.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+++|+|+|+ |-+|+.+++.|...|..+|++..|+.... +.+...+....+.+...+-......++|+||.+.+..
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era-~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~  340 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERV-AALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSE  340 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCC
Confidence            45799999997 99999999999999955799998864332 2222222111222322222223456799999876543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=95.45  E-value=0.06  Score=46.30  Aligned_cols=37  Identities=11%  Similarity=0.070  Sum_probs=32.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++.+|+|+||+|.+|..+++.+...| .+|++++++.
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G-~~Vi~~~~~~  186 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKG-CYVVGSAGSD  186 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcC-CEEEEEeCCH
Confidence            357899999999999999999999999 7888887753

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=95.45  E-value=0.13  Score=45.68  Aligned_cols=34  Identities=35%  Similarity=0.434  Sum_probs=30.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      |+|.|.| .|++|..++..|.+.| ++|++.+++..
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G-~~V~~~d~~~~   34 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLG-HEVTGVDIDQE   34 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcC-CeEEEEECCHH
Confidence            6899998 7999999999999999 99999998653

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.44  E-value=0.066  Score=41.47  Aligned_cols=38  Identities=21%  Similarity=0.136  Sum_probs=32.8

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ...+++|.|.| .|-||+++++.|..-| .+|++.+|...
T Consensus        33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG-~~V~~~d~~~~   70 (178)
T PF02826_consen   33 ELRGKTVGIIG-YGRIGRAVARRLKAFG-MRVIGYDRSPK   70 (178)
T ss_dssp             -STTSEEEEES-TSHHHHHHHHHHHHTT--EEEEEESSCH
T ss_pred             ccCCCEEEEEE-EcCCcCeEeeeeecCC-ceeEEecccCC
Confidence            34589999999 7999999999999999 99999999754

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.42  E-value=0.033  Score=49.53  Aligned_cols=74  Identities=23%  Similarity=0.298  Sum_probs=47.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+++|+|+|+ |-+|..+++.|...|...|++..|+.... +.+...+.   ...+..+-......++|+||.+.+..
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra-~~la~~~g---~~~~~~~~~~~~l~~aDvVI~aT~s~  253 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERA-EELAEEFG---GEAIPLDELPEALAEADIVISSTGAP  253 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHH-HHHHHHcC---CcEeeHHHHHHHhccCCEEEECCCCC
Confidence            56799999995 99999999999999844888888854222 12222221   12222221122345799999987643

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.40  E-value=0.094  Score=43.94  Aligned_cols=97  Identities=14%  Similarity=0.208  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc-chhhhcCCCceEEEeccc---C-CcccCCcCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHPRFELIRHDV---T-EPLLIEVDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dl---~-~~~~~~~d~vi~~a  105 (297)
                      +.++|.|.| +|.+|+.++..+.+....++.++......... ...+.   .++.....|+   . +..+.++|+|+.+.
T Consensus         3 ~klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~---~Gi~~~~~~ie~LL~~~~~~dIDiVf~AT   78 (302)
T PRK08300          3 SKLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARR---LGVATSAEGIDGLLAMPEFDDIDIVFDAT   78 (302)
T ss_pred             CCCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHH---cCCCcccCCHHHHHhCcCCCCCCEEEECC
Confidence            358899999 99999998988887643677766543222111 11111   2333322222   1 22346799999887


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      +.                  .........+.+.|+.+|-.|+..
T Consensus        79 ~a------------------~~H~e~a~~a~eaGk~VID~sPA~  104 (302)
T PRK08300         79 SA------------------GAHVRHAAKLREAGIRAIDLTPAA  104 (302)
T ss_pred             CH------------------HHHHHHHHHHHHcCCeEEECCccc
Confidence            42                  245677778888998888777766

>PLN03096 glyceraldehyde-3-phosphate dehydrogenase A; Provisional

Probab=95.40  E-value=0.16  Score=44.27  Aligned_cols=95  Identities=11%  Similarity=0.160  Sum_probs=56.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcC--CCeEEEEecCCCCCccchhhh-----------------------cCCCceEEEe
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYFTGSKDNLRKW-----------------------IGHPRFELIR   87 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~~-----------------------~~~~~~~~~~   87 (297)
                      ++|.|-|. |.||+.+++.|.++.  ..+|+++....  ..+.+.-+                       .....+.+.+
T Consensus        61 ~kVaInGf-GrIGR~vlr~l~~~~~~~~evvaINd~~--~~~~~ayLl~yDS~hG~f~~~v~~~~g~~l~v~gk~I~v~~  137 (395)
T PLN03096         61 IKVAINGF-GRIGRNFLRCWHGRKDSPLDVVAINDTG--GVKQASHLLKYDSTLGTFDADVKPVGDDAISVDGKVIKVVS  137 (395)
T ss_pred             cEEEEECc-CHHHHHHHHHHHhCCCCCeEEEEEcCCC--CHHHHHHHHhhcccCCCcCCcEEEecCCEEEECCEEEEEEE
Confidence            69999999 999999999998763  25666554211  11111000                       0111222222


Q ss_pred             -cccCCcc--cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecc
Q 022414           88 -HDVTEPL--LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (297)
Q Consensus        88 -~Dl~~~~--~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~  148 (297)
                       -|..+..  ..++|+|+.|.|...                  ....+....+.|++.|.+|+.
T Consensus       138 ~~dp~~~~w~~~gvDiVie~TG~f~------------------s~~~a~~hl~aGAkkV~iSap  183 (395)
T PLN03096        138 DRNPLNLPWGELGIDLVIEGTGVFV------------------DREGAGKHIQAGAKKVLITAP  183 (395)
T ss_pred             cCCcccccccccCCCEEEECcchhh------------------hHHHHHHHHHCCCEEEEeCCC
Confidence             1222222  258999999997542                  334455556789988888876

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=95.35  E-value=0.25  Score=35.19  Aligned_cols=84  Identities=17%  Similarity=0.150  Sum_probs=50.1

Q ss_pred             CEEEEEcCC---chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           33 MRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        33 ~~ilItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      |+|+|.|+|   +..|..+++.|.+.| ++|+.+.-+.    ...      .+. -...++.+ .-..+|.++.+..   
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G-~~v~~Vnp~~----~~i------~G~-~~y~sl~e-~p~~iDlavv~~~---   64 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAG-YEVYPVNPKG----GEI------LGI-KCYPSLAE-IPEPIDLAVVCVP---   64 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT--EEEEESTTC----SEE------TTE-E-BSSGGG-CSST-SEEEE-S----
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCC-CEEEEECCCc----eEE------CcE-EeeccccC-CCCCCCEEEEEcC---
Confidence            579999998   778999999999999 9999886532    110      011 12334443 2356888887652   


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCe-EEEEec
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTST  147 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-~v~~Ss  147 (297)
                                     -..+..+++.|.+.|++ +++.++
T Consensus        65 ---------------~~~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   65 ---------------PDKVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             ---------------HHHHHHHHHHHHHHT-SEEEE-TT
T ss_pred             ---------------HHHHHHHHHHHHHcCCCEEEEEcc
Confidence                           23466788888888984 555555

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.35  E-value=0.066  Score=44.53  Aligned_cols=59  Identities=15%  Similarity=0.236  Sum_probs=45.1

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ....+++|+|+|.++.+|+.++..|.++| .+|++..+..    .                |+ .....+.|+||.+.|.
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~g-atVtv~~s~t----~----------------~l-~~~~~~ADIVIsAvg~  211 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKN-ASVTILHSRS----K----------------DM-ASYLKDADVIVSAVGK  211 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCC-CeEEEEeCCc----h----------------hH-HHHHhhCCEEEECCCC
Confidence            34678999999999999999999999999 8888877631    0                11 1234678999988864


Q ss_pred             C
Q 022414          108 A  108 (297)
Q Consensus       108 ~  108 (297)
                      .
T Consensus       212 p  212 (286)
T PRK14175        212 P  212 (286)
T ss_pred             C
Confidence            3

>PRK06444 prephenate dehydrogenase; Provisional

Probab=95.32  E-value=0.027  Score=44.26  Aligned_cols=28  Identities=29%  Similarity=0.347  Sum_probs=26.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVI   61 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~   61 (297)
                      |+|.|.||+|.+|+.+++.|.+.| +.|.
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g-~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNG-LGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCC-CEEE
Confidence            689999999999999999999999 8875

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.26  E-value=0.046  Score=45.92  Aligned_cols=34  Identities=18%  Similarity=0.278  Sum_probs=30.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ++|.|.|+ |.+|..++..|.++| ++|++.+++..
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G-~~V~~~d~~~~   35 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSG-FQTTLVDIKQE   35 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCC-CcEEEEeCCHH
Confidence            67999995 999999999999999 99999998754

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.25  E-value=0.12  Score=34.56  Aligned_cols=35  Identities=20%  Similarity=0.421  Sum_probs=29.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      ...++++|.|. |.+|+.+++.|.+.+..+|.+.+|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            45799999997 999999999999984267776655

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>KOG4777 consensus Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.21  E-value=0.11  Score=41.75  Aligned_cols=34  Identities=18%  Similarity=0.310  Sum_probs=28.4

Q ss_pred             CEEE-EEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           33 MRIL-VTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        33 ~~il-ItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      +++. |+|+||-+|+.++..|.++.++++..+.-+
T Consensus         4 kk~a~vlGaTGaVGQrFi~lLsdhP~f~ikvLgAS   38 (361)
T KOG4777|consen    4 KKSAPVLGATGAVGQRFISLLSDHPYFSIKVLGAS   38 (361)
T ss_pred             ccccceeeccchhHHHHHHHhccCCcceeeeeccc
Confidence            5555 999999999999999999987788777443

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=95.20  E-value=0.1  Score=43.22  Aligned_cols=69  Identities=17%  Similarity=0.221  Sum_probs=40.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      +|+|.|.| .|.+|+.+++.|.+.+ ..++..+........+.+.+.   .+.. ...|+.+. ..++|+|+.|+.
T Consensus         1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~---~~~~-~~~~~~el-l~~~DvVvi~a~   70 (265)
T PRK13304          1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASK---TGAK-ACLSIDEL-VEDVDLVVECAS   70 (265)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHh---cCCe-eECCHHHH-hcCCCEEEEcCC
Confidence            37999999 6999999999998763 256554443222211222111   1222 11233222 257999999874

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.13  E-value=0.11  Score=44.03  Aligned_cols=66  Identities=14%  Similarity=0.150  Sum_probs=45.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceE-EEecccCCcccCCcCEEEEccCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFE-LIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ..+++|.|.| .|-||+.+++.|...| .+|++.+|......          .+. +...+-.+..+.++|+|+.+...
T Consensus       134 l~g~tvgIvG-~G~IG~~vA~~l~afG-~~V~~~~~~~~~~~----------~~~~~~~~~~l~e~l~~aDvvv~~lPl  200 (312)
T PRK15469        134 REDFTIGILG-AGVLGSKVAQSLQTWG-FPLRCWSRSRKSWP----------GVQSFAGREELSAFLSQTRVLINLLPN  200 (312)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEeCCCCCCC----------CceeecccccHHHHHhcCCEEEECCCC
Confidence            3579999999 8999999999999999 99999987532211          111 11111123345678998887743

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.13  E-value=0.34  Score=42.94  Aligned_cols=101  Identities=16%  Similarity=0.151  Sum_probs=64.3

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCC-----CeEEEEecCCCCCccch----------------------hhhcCCCceEEE
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEK-----NEVIVVDNYFTGSKDNL----------------------RKWIGHPRFELI   86 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~-----~~v~~~~r~~~~~~~~~----------------------~~~~~~~~~~~~   86 (297)
                      +|+|.| .|.+|.++++.|...|-     -++++++...-......                      .++...-+++.+
T Consensus         1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~   79 (435)
T cd01490           1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL   79 (435)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence            589999 68999999999999994     58888887642211111                      111111234444


Q ss_pred             ecccCC--------cccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           87 RHDVTE--------PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        87 ~~Dl~~--------~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      ...+..        .-..++|+|+++.-                 |+.+-..+-+.|...++.+|..++.+..|
T Consensus        80 ~~~v~~~~~~~~~~~f~~~~DvVi~alD-----------------n~~aR~~vn~~C~~~~iPli~~gt~G~~G  136 (435)
T cd01490          80 QNRVGPETEHIFNDEFWEKLDGVANALD-----------------NVDARMYVDRRCVYYRKPLLESGTLGTKG  136 (435)
T ss_pred             ecccChhhhhhhhHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHhCCCEEEEeccccee
Confidence            433321        11246888887641                 34455677889999999998888766544

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.12  E-value=0.14  Score=46.53  Aligned_cols=71  Identities=15%  Similarity=0.147  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .+++|+|.| .|-.|.+.++.|.+.| .+|++.++...    .... +...++.++..+.......++|.||...|+.
T Consensus        11 ~~~~v~V~G-~G~sG~aa~~~L~~~G-~~v~~~D~~~~----~~~~-l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~   81 (488)
T PRK03369         11 PGAPVLVAG-AGVTGRAVLAALTRFG-ARPTVCDDDPD----ALRP-HAERGVATVSTSDAVQQIADYALVVTSPGFR   81 (488)
T ss_pred             CCCeEEEEc-CCHHHHHHHHHHHHCC-CEEEEEcCCHH----HHHH-HHhCCCEEEcCcchHhHhhcCCEEEECCCCC
Confidence            578999999 7889999999999999 99999886422    1211 2223455544332222345689999987754

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.02  E-value=0.11  Score=39.19  Aligned_cols=38  Identities=16%  Similarity=0.302  Sum_probs=29.6

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      .....+|+|+|.|.+..+|+.++..|.++| ..|+....
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~-atVt~~h~   68 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKG-ATVTICHS   68 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-T
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCC-CeEEeccC
Confidence            345679999999999999999999999999 88887655

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.01  E-value=0.17  Score=40.14  Aligned_cols=91  Identities=15%  Similarity=0.172  Sum_probs=63.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      +...+++|+|.| .|-+|..=++.|++.| .+|++++...   .+++..+.+..++.+++.++......+++.||-+.  
T Consensus         8 ~~l~~k~VlvvG-gG~va~rKa~~ll~~g-a~v~Vvs~~~---~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt--   80 (210)
T COG1648           8 LDLEGKKVLVVG-GGSVALRKARLLLKAG-ADVTVVSPEF---EPELKALIEEGKIKWIEREFDAEDLDDAFLVIAAT--   80 (210)
T ss_pred             EEcCCCEEEEEC-CCHHHHHHHHHHHhcC-CEEEEEcCCc---cHHHHHHHHhcCcchhhcccChhhhcCceEEEEeC--
Confidence            345689999999 5999999999999999 9999988754   45556665556677777555444455566555432  


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                       +              +-.....+.++|++.++
T Consensus        81 -~--------------d~~ln~~i~~~a~~~~i   98 (210)
T COG1648          81 -D--------------DEELNERIAKAARERRI   98 (210)
T ss_pred             -C--------------CHHHHHHHHHHHHHhCC
Confidence             1              12235577888888663

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=94.99  E-value=0.47  Score=32.58  Aligned_cols=85  Identities=14%  Similarity=0.108  Sum_probs=56.1

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCccc
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFY  113 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~~~  113 (297)
                      +|+|.||-...-..+-+.+.+.| .+.+...|........  ..+             .....++|.||......+.   
T Consensus         1 ~vliVGG~~~~~~~~~~~~~~~G-~~~~~hg~~~~~~~~~--~~l-------------~~~i~~aD~VIv~t~~vsH---   61 (97)
T PF10087_consen    1 SVLIVGGREDRERRYKRILEKYG-GKLIHHGRDGGDEKKA--SRL-------------PSKIKKADLVIVFTDYVSH---   61 (97)
T ss_pred             CEEEEcCCcccHHHHHHHHHHcC-CEEEEEecCCCCccch--hHH-------------HHhcCCCCEEEEEeCCcCh---
Confidence            58999987777788888888999 7776663322111111  000             1233567888887654432   


Q ss_pred             ccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          114 KYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       114 ~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                                  .....+-+.|++.++++++..+.+
T Consensus        62 ------------~~~~~vk~~akk~~ip~~~~~~~~   85 (97)
T PF10087_consen   62 ------------NAMWKVKKAAKKYGIPIIYSRSRG   85 (97)
T ss_pred             ------------HHHHHHHHHHHHcCCcEEEECCCC
Confidence                        246688899999999999987644

>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.99  E-value=0.26  Score=44.56  Aligned_cols=74  Identities=11%  Similarity=0.035  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .+++|+|.|. |--|.+.++.|.+.| .+|++.+.+.........+ +.. .+..+.+.-......++|.||..-|+.
T Consensus         7 ~~~~v~v~G~-G~sG~~~~~~l~~~g-~~v~~~d~~~~~~~~~~~~-l~~-~~~~~~~~~~~~~~~~~d~vV~SpgI~   80 (468)
T PRK04690          7 EGRRVALWGW-GREGRAAYRALRAHL-PAQALTLFCNAVEAREVGA-LAD-AALLVETEASAQRLAAFDVVVKSPGIS   80 (468)
T ss_pred             CCCEEEEEcc-chhhHHHHHHHHHcC-CEEEEEcCCCcccchHHHH-Hhh-cCEEEeCCCChHHccCCCEEEECCCCC
Confidence            4789999996 899999999999999 9999988543222111112 222 333333332222345689999876654

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.97  E-value=0.038  Score=46.13  Aligned_cols=75  Identities=15%  Similarity=0.170  Sum_probs=46.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCce-EEEecccC--CcccCCcCEEEEcc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRF-ELIRHDVT--EPLLIEVDQIYHLA  105 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~-~~~~~Dl~--~~~~~~~d~vi~~a  105 (297)
                      ..+++++|.|+ |..|++++-.|.+.|..+++++.|+..+. +.+...+. .... .....+..  +.....+|+|||+.
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka-~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT  202 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRA-QALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH-HHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence            34689999995 89999999999999967899999864332 22322221 1111 01112221  11234689999986


Q ss_pred             C
Q 022414          106 C  106 (297)
Q Consensus       106 ~  106 (297)
                      .
T Consensus       203 p  203 (283)
T PRK14027        203 P  203 (283)
T ss_pred             C
Confidence            4

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=94.96  E-value=0.26  Score=43.24  Aligned_cols=33  Identities=24%  Similarity=0.453  Sum_probs=28.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      |+|.|.| .|++|..++..|. .| ++|++++++..
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G-~~VigvD~d~~   33 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QN-HEVVALDILPS   33 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hC-CcEEEEECCHH
Confidence            6899997 8999999996665 58 99999999754

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=94.94  E-value=0.14  Score=42.59  Aligned_cols=70  Identities=16%  Similarity=0.132  Sum_probs=41.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ..++|.|.| .|.||+.+++.|.+.  + .++.++........+.+...+   +......|+.+ .+.++|+|+.|+.
T Consensus         5 ~~irIGIIG-~G~IG~~~a~~L~~~~~~-~el~aV~dr~~~~a~~~a~~~---g~~~~~~~~ee-ll~~~D~Vvi~tp   76 (271)
T PRK13302          5 PELRVAIAG-LGAIGKAIAQALDRGLPG-LTLSAVAVRDPQRHADFIWGL---RRPPPVVPLDQ-LATHADIVVEAAP   76 (271)
T ss_pred             CeeEEEEEC-ccHHHHHHHHHHHhcCCC-eEEEEEECCCHHHHHHHHHhc---CCCcccCCHHH-HhcCCCEEEECCC
Confidence            358999999 799999999999874  5 777755443222222222211   11111122222 2346899999875

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.88  E-value=0.078  Score=44.47  Aligned_cols=76  Identities=7%  Similarity=-0.004  Sum_probs=47.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC--CCccchhhhcCCC---ceEEEecccC---CcccCCcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRKWIGHP---RFELIRHDVT---EPLLIEVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~--~~~~~~~~~~~~~---~~~~~~~Dl~---~~~~~~~d~v  101 (297)
                      ..+++++|+|+ |..+++++-.|...|..+|+++.|+..  .+.+.+...+...   .+.+...+-.   .....++|+|
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv  200 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL  200 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence            45789999996 555999999999999679999999743  2333333332211   1222222100   1133468999


Q ss_pred             EEccC
Q 022414          102 YHLAC  106 (297)
Q Consensus       102 i~~a~  106 (297)
                      ||+..
T Consensus       201 INaTp  205 (288)
T PRK12749        201 TNGTK  205 (288)
T ss_pred             EECCC
Confidence            99753

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.87  E-value=0.079  Score=44.35  Aligned_cols=38  Identities=18%  Similarity=0.239  Sum_probs=34.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ....+++|.|.|.+|.+|+.++..|+++| ++|++..+.
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g-atVtv~~~~  192 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAH-CSVTVVHSR  192 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCC-CEEEEECCC
Confidence            34569999999999999999999999999 999988663

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=94.86  E-value=0.047  Score=42.57  Aligned_cols=34  Identities=38%  Similarity=0.511  Sum_probs=27.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      |||.|.| .||+|..++..|.+.| ++|++++.+..
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G-~~V~g~D~~~~   34 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKG-HQVIGVDIDEE   34 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTT-SEEEEE-S-HH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCC-CEEEEEeCChH
Confidence            8999997 8999999999999999 99999998653

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.79  E-value=0.12  Score=43.85  Aligned_cols=35  Identities=20%  Similarity=0.320  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      .++|.|.| .|.+|..++..|++.| ++|++.+++..
T Consensus         4 ~~~I~vIG-aG~mG~~iA~~l~~~g-~~V~~~d~~~~   38 (311)
T PRK06130          4 IQNLAIIG-AGTMGSGIAALFARKG-LQVVLIDVMEG   38 (311)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCC-CeEEEEECCHH
Confidence            47899998 5999999999999999 99999998643

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.79  E-value=0.062  Score=46.94  Aligned_cols=75  Identities=19%  Similarity=0.284  Sum_probs=54.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      ..+++++|.| .|-+|.-+++.|.++|...|++..|...+ ...+.+.+   +..++..|-....+..+|+||.+.+...
T Consensus       176 L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~er-A~~La~~~---~~~~~~l~el~~~l~~~DvVissTsa~~  250 (414)
T COG0373         176 LKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLER-AEELAKKL---GAEAVALEELLEALAEADVVISSTSAPH  250 (414)
T ss_pred             cccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHH-HHHHHHHh---CCeeecHHHHHHhhhhCCEEEEecCCCc
Confidence            3689999999 59999999999999997888888885322 22233332   3555555555566778999999876443

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.78  E-value=0.11  Score=43.55  Aligned_cols=35  Identities=23%  Similarity=0.236  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      .++|.|.| +|.+|..++..|.+.| ++|++.+++..
T Consensus         3 ~~kIaViG-aG~mG~~iA~~la~~G-~~V~l~d~~~~   37 (287)
T PRK08293          3 IKNVTVAG-AGVLGSQIAFQTAFHG-FDVTIYDISDE   37 (287)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcC-CeEEEEeCCHH
Confidence            37899999 5999999999999999 99999998753

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.64  E-value=0.13  Score=43.15  Aligned_cols=35  Identities=26%  Similarity=0.279  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      .++|.|.| .|.+|..++..|++.| ++|++++++..
T Consensus         3 ~~kI~VIG-~G~mG~~ia~~la~~g-~~V~~~d~~~~   37 (282)
T PRK05808          3 IQKIGVIG-AGTMGNGIAQVCAVAG-YDVVMVDISDA   37 (282)
T ss_pred             ccEEEEEc-cCHHHHHHHHHHHHCC-CceEEEeCCHH
Confidence            46899999 5999999999999999 89999987654

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.62  E-value=0.85  Score=36.03  Aligned_cols=35  Identities=23%  Similarity=0.303  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ..++|+|.|+ |.+|+.+++.|.+.|..++++++++
T Consensus        20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999996 8899999999999994479998887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14851 hypothetical protein; Provisional

Probab=94.61  E-value=0.33  Score=45.72  Aligned_cols=101  Identities=9%  Similarity=0.058  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~   88 (297)
                      .+.+|+|.| .|.+|+++++.|...|--++++++...-.....                      +.++...-+++.+..
T Consensus        42 ~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~  120 (679)
T PRK14851         42 AEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPA  120 (679)
T ss_pred             hcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEec
Confidence            479999999 789999999999999966777777653211110                      111112224555555


Q ss_pred             ccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414           89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus        89 Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                      .++..    -+.++|+||.+.-..               ....-..+.+.|.+.++.+|+.+.
T Consensus       121 ~i~~~n~~~~l~~~DvVid~~D~~---------------~~~~r~~l~~~c~~~~iP~i~~g~  168 (679)
T PRK14851        121 GINADNMDAFLDGVDVVLDGLDFF---------------QFEIRRTLFNMAREKGIPVITAGP  168 (679)
T ss_pred             CCChHHHHHHHhCCCEEEECCCCC---------------cHHHHHHHHHHHHHCCCCEEEeec
Confidence            55432    234799999765110               112234567789999998887653

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.58  E-value=1.6  Score=37.37  Aligned_cols=34  Identities=26%  Similarity=0.363  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      .+|++.|.| .|-||+++++.|..-| .+|++.++.
T Consensus       141 ~gkTvGIiG-~G~IG~~va~~l~afg-m~v~~~d~~  174 (324)
T COG0111         141 AGKTVGIIG-LGRIGRAVAKRLKAFG-MKVIGYDPY  174 (324)
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCC-CeEEEECCC
Confidence            489999999 8999999999999999 999999994

>PRK08955 glyceraldehyde-3-phosphate dehydrogenase; Validated

Probab=94.53  E-value=0.55  Score=40.17  Aligned_cols=96  Identities=13%  Similarity=0.180  Sum_probs=58.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC----------------------CCceEEEe-cc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----------------------HPRFELIR-HD   89 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~----------------------~~~~~~~~-~D   89 (297)
                      +||.|.|. |.+|+.+++.+.+++..++.++.... ...+.+.-++.                      ...+.+.+ -|
T Consensus         3 ikigInG~-GRiGr~v~r~~~~~~~~~ivaind~~-~~~~~~a~ll~yDs~~g~~~~~v~~~g~~l~~~g~~i~v~~~~~   80 (334)
T PRK08955          3 IKVGINGF-GRIGRLALRAAWDWPELEFVQINDPA-GDAATLAHLLEFDSVHGRWHHEVTAEGDAIVINGKRIRTTQNKA   80 (334)
T ss_pred             eEEEEECc-CHHHHHHHHHHHhCCCcEEEEecCCC-CCHHHHHHHhhhhccCCCCCCCEEEcCCEEEECCEEEEEEecCC
Confidence            79999999 99999999998877546666654311 11111111110                      11122221 13


Q ss_pred             cCCcccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecc
Q 022414           90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (297)
Q Consensus        90 l~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~  148 (297)
                      ..+....++|+|+.|+|...                  ....+....+.|++.|.+|+.
T Consensus        81 ~~~~~w~gvDiVle~tG~~~------------------s~~~a~~hl~aGak~V~iSap  121 (334)
T PRK08955         81 IADTDWSGCDVVIEASGVMK------------------TKALLQAYLDQGVKRVVVTAP  121 (334)
T ss_pred             hhhCCccCCCEEEEccchhh------------------cHHHHHHHHHCCCEEEEECCC
Confidence            43434458999999997542                  344555666789988888877

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=94.50  E-value=0.39  Score=39.34  Aligned_cols=90  Identities=24%  Similarity=0.300  Sum_probs=55.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-------ccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-------LLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------~~~~~d~vi~~a  105 (297)
                      |+|+|+|||+ =|+.|++.|.+.| + |.+..-.+... +.....  ........+-+.+.       ...+++.||.+.
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g-~-v~~sv~t~~g~-~~~~~~--~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDAT   74 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAG-Y-VIVSVATSYGG-ELLKPE--LPGLEVRVGRLGDEEGLAEFLRENGIDAVIDAT   74 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcC-C-EEEEEEhhhhH-hhhccc--cCCceEEECCCCCHHHHHHHHHhCCCcEEEECC
Confidence            8999999987 5899999999999 6 44332221111 111010  12455666666332       224799999976


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEE
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v  143 (297)
                      -+.               ......++.++|++.|+.++
T Consensus        75 HPf---------------A~~is~na~~a~~~~~ipyl   97 (249)
T PF02571_consen   75 HPF---------------AAEISQNAIEACRELGIPYL   97 (249)
T ss_pred             Cch---------------HHHHHHHHHHHHhhcCcceE
Confidence            322               13356788888888887544

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>cd08230 glucose_DH Glucose dehydrogenase

Probab=94.50  E-value=0.18  Score=43.67  Aligned_cols=34  Identities=32%  Similarity=0.254  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      .+.+|+|+|+ |.+|...++.+...| .+|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G-~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRG-FEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcC-CeEEEEecC
Confidence            5789999985 999999999988889 689998884

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=94.48  E-value=2.5  Score=37.96  Aligned_cols=89  Identities=13%  Similarity=0.117  Sum_probs=56.5

Q ss_pred             cCCCEEEEEcCC---chhHHHHHHHHHhcCCC--eEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEc
Q 022414           30 QSNMRILVTGGA---GFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGat---G~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~  104 (297)
                      ...++|.|.|+|   |-+|..+++.|.+.| +  .|+.+.....    ..      .++. +..++.+. -..+|.++.+
T Consensus         5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~g-f~g~v~~Vnp~~~----~i------~G~~-~~~sl~~l-p~~~Dlavi~   71 (447)
T TIGR02717         5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGG-YKGKIYPVNPKAG----EI------LGVK-AYPSVLEI-PDPVDLAVIV   71 (447)
T ss_pred             cCCCEEEEEccCCCCCchHHHHHHHHHhCC-CCCcEEEECCCCC----cc------CCcc-ccCCHHHC-CCCCCEEEEe
Confidence            446899999998   678999999999998 5  6776664311    11      1111 11122221 1357888866


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCe-EEEEecce
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSE  149 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-~v~~Ss~~  149 (297)
                      ..                  -.....+++.|.+.|+| ++.+|+..
T Consensus        72 vp------------------~~~~~~~l~e~~~~gv~~~vi~s~gf   99 (447)
T TIGR02717        72 VP------------------AKYVPQVVEECGEKGVKGAVVITAGF   99 (447)
T ss_pred             cC------------------HHHHHHHHHHHHhcCCCEEEEECCCc
Confidence            52                  22466788888889994 66666643

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.46  E-value=0.17  Score=37.32  Aligned_cols=38  Identities=24%  Similarity=0.311  Sum_probs=33.8

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      .....+++|.|.|.+.-+|+.++..|.++| .+|+...+
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~g-atV~~~~~   60 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDG-ATVYSCDW   60 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEeCC
Confidence            345679999999999999999999999999 88888775

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	297
4ef7_B	337	Udp-Xylose Synthase Length = 337		1e-103
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		1e-99
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		4e-26
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		1e-25
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		2e-24
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		4e-24
2bll_A	345	Apo-Structure Of The C-Terminal Decarboxylase Domai		1e-23
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		2e-23
1z74_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		5e-23
1z75_A	358	Crystal Structure Of Arna Dehydrogenase (decarboxyl		5e-23
1u9j_A	358	Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl		5e-23
1z7b_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		6e-23
1z7e_A	660	Crystal Structure Of Full Length Arna Length = 660		7e-23
1z73_A	358	Crystal Structure Of E. Coli Arna Dehydrogenase (de		1e-22
3slg_A	372	Crystal Structure Of Pbgp3 Protein From Burkholderi		1e-21
2pzj_A	377	Crystal Structure Of The Bordetella Bronchiseptica		1e-20
4egb_A	346	3.0 Angstrom Resolution Crystal Structure Of Dtdp-G		1e-18
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		1e-18
3vps_A	321	Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5		4e-18
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		5e-18
1bxk_A	355	Dtdp-Glucose 4,6-Dehydratase From E. Coli Length =		6e-18
2c5e_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		9e-17
2c59_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		1e-16
2c54_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		2e-16
2c5a_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		3e-16
3sxp_A	362	Crystal Structure Of Helicobacter Pylori Adp-L-Glyc		6e-16
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		3e-15
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		3e-15
3lu1_A	364	Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-		9e-15
3ruc_A	351	Specific Recognition Of N-Acetylated Substrates And		1e-14
3ru9_A	351	Specific Recognition Of N-Acetylated Substrates And		1e-14
3ru7_A	351	Specific Recognition Of N-Acetylated Substrates And		1e-14
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		8e-14
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		1e-13
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-13
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		2e-13
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-13
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		5e-13
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		5e-13
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-13
2c20_A	330	Crystal Structure Of Udp-Glucose 4-Epimerase Length		6e-13
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		7e-13
4b8w_A	319	Crystal Structure Of Human Gdp-L-Fucose Synthase Wi		7e-13
4b8z_A	320	Crystal Structure Of Human Gdp-l-fucose Synthase Wi		8e-13
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		8e-13
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		1e-12
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		1e-12
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		2e-12
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		2e-10
3m2p_A	311	The Crystal Structure Of Udp-N-Acetylglucosamine 4-		3e-10
1gy8_A	397	Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt		6e-10
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		1e-08
1e6u_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le		4e-08
1bsv_A	321	Gdp-Fucose Synthetase From Escherichia Coli Complex		5e-08
1e7s_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1		1e-07
1bws_A	321	Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E		1e-07
1e7q_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S1		1e-07
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		1e-07
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		1e-07
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		1e-07
1e7r_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y1		2e-07
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		4e-07
3enk_A	341	1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F		6e-06
2x6t_A	357	Agme Bound To Adp-B-Mannose Length = 357		8e-06
1eq2_A	310	The Crystal Structure Of Adp-L-Glycero-D-Mannohepto		1e-05
1wvg_A	359	Structure Of Cdp-D-Glucose 4,6-Dehydratase From Sal		3e-05
2gn4_A	344	Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehyd		1e-04
2zkl_A	369	Crystal Structure Of Capsular Polysaccharide Assemb		1e-04
1qrr_A	394	Crystal Structure Of Sqd1 Protein Complex With Nad		2e-04
1i2b_A	404	Crystal Structure Of Mutant T145a Sqd1 Protein Comp		2e-04
1i24_A	404	High Resolution Crystal Structure Of The Wild-Type		2e-04
3st7_A	369	Crystal Structure Of Capsular Polysaccharide Assemb		5e-04
3sc6_A	287	2.65 Angstrom Resolution Crystal Structure Of Dtdp-		5e-04
1db3_A	372	E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372		5e-04

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score =  359 bits (921), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 170/253 (67%), Positives = 203/253 (80%), Gaps = 1/253 (0%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKL   + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 29  RILITGGAGFVGSHLTDKLXX-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 87
Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLN LGLAKRVGAR+LL STSEVYGD
Sbjct: 88  LYIEVDQIYHLASPASPPNYXYNPIKTLKTNTIGTLNXLGLAKRVGARLLLASTSEVYGD 147
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET  + Y +Q G+E+R+ARIFNT+GPR + 
Sbjct: 148 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETXCYAYXKQEGVEVRVARIFNTFGPRXHX 207
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ L     + P+N+GNP E
Sbjct: 208 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALXNSNVSSPVNLGNPEE 267
Query: 274 FTMLELAENVKEV 286
            T+LE A+ +K +
Sbjct: 268 HTILEFAQLIKNL 280

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 134/267 (50%), Gaps = 30/267 (11%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MRI+VTGGAGFIGSHLVDKL+E    EV+VVDN  +G ++ +     +P  EL   D+ +
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVE-LGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKD 54
Query: 93  PLL---IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTS 148
                 I+ D ++H A           P+     NV+ T N+L  A++ G R ++  S+S
Sbjct: 55  YSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSS 114
Query: 149 EVYGDPLV--HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            VYGD  V   P++E Y     PI   S Y   K   E +   Y R  G+     R  N 
Sbjct: 115 TVYGDADVIPTPEEEPY----KPI---SVYGAAKAAGEVMCATYARLFGVRCLAVRYANV 167
Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEP--LTVQAPGTQTRSFCYVSDMVDGLIRLMEG--EN 262
            GPR+      V+ +FI + +R  P  L V   GTQ +S+ YV D V+  +   +   E 
Sbjct: 168 VGPRLRHG---VIYDFIMK-LRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEM 223
Query: 263 TGP---INIGNPGEFTMLELAENVKEV 286
             P   +N+GN     +L++A+ V EV
Sbjct: 224 DAPFLALNVGNVDAVRVLDIAQIVAEV 250

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 132/254 (51%), Gaps = 14/254 (5%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           I+VTGGAGFIGSH+VDKL  +E NE++V+DN  +G+++ + +     + +L   D+ +  
Sbjct: 4   IVVTGGAGFIGSHVVDKL--SESNEIVVIDNLSSGNEEFVNEAARLVKADLAADDIKD-Y 60
Query: 95  LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD 153
           L   ++++H+A          NP +  + NV+ T  +L   ++ G +RI+ TSTS VYG+
Sbjct: 61  LKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGE 120
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
             V P  E Y    +PI   S Y   K   E L+  Y     ++  I R  N  G R   
Sbjct: 121 AKVIPTPEDY--PTHPI---SLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRST- 174
Query: 214 DDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG-ENTGPINIGNP 271
               V+ +FI +  R  E L +   G Q +S+ Y+SD VD ++  + G E     NIG+ 
Sbjct: 175 --HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSE 232
Query: 272 GEFTMLELAENVKE 285
            +  +  +AE V E
Sbjct: 233 DQIKVKRIAEIVCE 246

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 122/260 (46%), Gaps = 20/260 (7%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENE-----KNEVIVVDNY-FTGSKDNLRKWIGHPRFELI 86
           MR+LVTGGAGFIGSH V +L+         +EVIV+D+  + G++ NL      PR   +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 87  RHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A 140
             D+ +  L+      VD I H A  +             +TNV GT  +L  A   G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 141 RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
           R++  ST EVYG       D   W   +P+   S Y   K  ++ +   YHR +G+++RI
Sbjct: 121 RVVHVSTDEVYGS-----IDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 201 ARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
            R  N YGP  + +  +++  F+   + G  L +   G   R + +  D   G+  ++ G
Sbjct: 176 TRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG 233
Query: 261 ENTGPI-NIGNPGEFTMLEL 279
              G I +IG   E T  EL
Sbjct: 234 GRAGEIYHIGGGLELTNREL 253

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 20/260 (7%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENE-----KNEVIVVDNY-FTGSKDNLRKWIGHPRFELI 86
           MR+LVTGGAGFIGSH V +L+         +EVIV+D+  + G++ NL      PR   +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 87  RHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A 140
             D+ +  L+      VD I H A  +             +TNV GT  +L  A   G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 141 RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
           R++  ST++VYG       D   W   +P+   S Y   K  ++ +   YHR +G+++RI
Sbjct: 121 RVVHVSTNQVYGS-----IDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 201 ARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
            R  N YGP  + +  +++  F+   + G  L +   G   R + +  D   G+  ++ G
Sbjct: 176 TRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG 233
Query: 261 ENTGPI-NIGNPGEFTMLEL 279
              G I +IG   E T  EL
Sbjct: 234 GRAGEIYHIGGGLELTNREL 253

>pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 133/270 (49%), Gaps = 27/270 (10%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
           MR+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++ 
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISI 56
Query: 92  -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
                E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  S
Sbjct: 57  HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116
Query: 147 TSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           TSEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R F
Sbjct: 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 176
Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
           N  GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++
Sbjct: 177 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 236
Query: 259 EGENTGP------INIGNP-GEFTMLELAE 281
             EN G       INIGNP  E ++ EL E
Sbjct: 237 --ENAGNRCDGEIINIGNPENEASIEELGE 264

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 130/266 (48%), Gaps = 32/266 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVD--NYFTGSKDNLRKWIGHPRFELIRHDV 90
           MRI+VTGGAGFIGSHLVDKL+E    EV+VVD     TG    L     H R +L   D 
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVE-LGYEVVVVDIVQRDTGGSAEL-----HVR-DL--KDY 51
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSE 149
           +    I+ D ++H A           P+     NV+ T N+L  A++ G R ++  S+S 
Sbjct: 52  SWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST 111
Query: 150 VYGDPLV--HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
           VYGD  V   P++E Y     PI   S Y   K   E +   Y R  G+     R  N  
Sbjct: 112 VYGDADVIPTPEEEPY----KPI---SVYGAAKAAGEVMCATYARLFGVRCLAVRYANVV 164
Query: 208 GPRMNIDDGRVVSNFIAQAIRGEP--LTVQAPGTQTRSFCYVSDMVDGLIRLMEG--ENT 263
           GPR+      V+ +FI + +R  P  L V   GTQ +S+ YV D V+  +   +   E  
Sbjct: 165 GPRLR---HGVIYDFIMK-LRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMD 220
Query: 264 GP---INIGNPGEFTMLELAENVKEV 286
            P   +N+GN     +L++A+ V EV
Sbjct: 221 APFLALNVGNVDAVRVLDIAQIVAEV 246

>pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 15  RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 70
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 71  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 130
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           SEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 131 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 190
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 191 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 249
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
            EN G       INIGNP  E ++ EL E
Sbjct: 250 -ENAGNRCDGEIINIGNPENEASIEELGE 277

>pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 15  RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 70
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 71  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 130
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           SEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 131 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 190
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 191 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 249
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
            EN G       INIGNP  E ++ EL E
Sbjct: 250 -ENAGNRCDGEIINIGNPENEASIEELGE 277

>pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 15  RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 70
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 71  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 130
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           SEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 131 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 190
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 191 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 249
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
            EN G       INIGNP  E ++ EL E
Sbjct: 250 -ENAGNRCDGEIINIGNPENEASIEELGE 277

>pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358

Iteration: 1
 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 15  RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 70
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 71  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 130
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           SEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 131 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 190
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 191 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 249
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
            EN G       INIGNP  E ++ EL E
Sbjct: 250 -ENAGNRCDGEIINIGNPENEASIEELGE 277

>pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660

Iteration: 1
 Score =  104 bits (259), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           SEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
            EN G       INIGNP  E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579

>pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 15  RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 70
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 71  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 130
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           +EVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 131 AEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 190
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 191 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 249
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
            EN G       INIGNP  E ++ EL E
Sbjct: 250 -ENAGNRCDGEIINIGNPENEASIEELGE 277

>pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia Pseudomallei Length = 372

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 134/275 (48%), Gaps = 30/275 (10%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           ++L+ G  GFIG HL  +++E    EV  +D       D L   + H R      D+T  
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDM----QTDRLGDLVKHERMHFFEGDITIN 81
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D I  L   A+P  Y   P++  + +    L ++  A + G  ++  ST
Sbjct: 82  KEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPST 141
Query: 148 SEVYG---DPLVHPQDESY-WGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           SEVYG   D    P   +  +G +N P  + +C    K++ + +++ Y  + G+   + R
Sbjct: 142 SEVYGMCADEQFDPDASALTYGPINKPRWIYAC---SKQLMDRVIWGYGME-GLNFTLFR 197
Query: 203 IFNTYGPRMNI------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
            FN  GP ++          RVV+ F+   +RGE +++   G+Q R+F YV D +  L++
Sbjct: 198 PFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMK 257
Query: 257 LMEGEN---TGPI-NIGNP-GEFTMLELAENVKEV 286
           ++E  N   TG I NIGNP   F++ ELA  + E+
Sbjct: 258 IIENSNGVATGKIYNIGNPNNNFSVRELANKMLEL 292

>pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 127/286 (44%), Gaps = 26/286 (9%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +N  ++V GGAGF+GS+LV +L+E   N+V VVDN  +  K N+     HP        +
Sbjct: 31  ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD---HPAVRFSETSI 87
Query: 91  TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM---LGLAKRVGARI 142
           T+  L+     E D ++HLA         ++P+   + N + TL +   L   KR+   +
Sbjct: 88  TDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVV 147
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
              +   +        +       V+     S Y   K   E     YH+QH +    AR
Sbjct: 148 YSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRAR 207
Query: 203 IFNTYGPRMNIDDGR-----------VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
             N YGP   +  GR           V   FI +A++G PL ++  G  TR F +V D+ 
Sbjct: 208 FQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVA 267
Query: 252 DGLIRL-MEGENTGPINIGNPGEFTMLELAENVKEV---NFYLGRL 293
           +GLI    +G   G  NI +  E ++ +LA  + E+   N  L RL
Sbjct: 268 NGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRL 313

>pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 18/268 (6%)
Query: 28  FFQSNM-RILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNY-FTGSKDNLRKWIGHPRFE 84
           +FQSN   ILVTGGAGFIGS+ V   +++ E  ++I  D   ++G+ +N++    HP + 
Sbjct: 19  YFQSNAXNILVTGGAGFIGSNFVHYXLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYY 78
Query: 85  LIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 137
            ++ ++    L+E       V  I + A  +       NP+    TNVIGT+ +L L K+
Sbjct: 79  FVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKK 138
Query: 138 V-GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
               +++  ST EVYG           +    P+   S Y   K  A+ +   Y++ + +
Sbjct: 139 YPHIKLVQVSTDEVYGS----LGKTGRFTEETPLAPNSPYSSSKASADXIALAYYKTYQL 194
Query: 197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
            + + R  N YGP    +  +++   +  A+ G+ L +   G   R + +V+D    +  
Sbjct: 195 PVIVTRCSNNYGPYQYPE--KLIPLXVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDV 252
Query: 257 LMEGENTGPI-NIGNPGEFTMLELAENV 283
           ++     G + NIG   E T +E+ E +
Sbjct: 253 VLHKGRVGEVYNIGGNNEKTNVEVVEQI 280

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 17/260 (6%)
Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSK-DNLRKWIGHPRFELIRHD 89
           +M++LVTGG GFIGS+ +  ++E   + EVI +D    GS   NL+     PR+  ++ D
Sbjct: 3   SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGD 62
Query: 90  VTEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARI 142
           V +  L+     +VD + HLA  +       +P   + +NVIGT  +L   +R     R 
Sbjct: 63  VADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRF 122
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           +  ST EVYGD L     E+     + +   S Y   K  ++ L+  + R + +   I R
Sbjct: 123 VHVSTDEVYGDILKGSFTEN-----DRLMPSSPYSATKAASDMLVLGWTRTYNLNASITR 177
Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRLMEGE 261
             N YGP    +  +++   I +A  G  + +   G   R + YV D V  + + L++GE
Sbjct: 178 CTNNYGPYQFPE--KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE 235
Query: 262 NTGPINIGNPGEFTMLELAE 281
           +    NI    E T LE+ +
Sbjct: 236 SREIYNISAGEEKTNLEVVK 255

>pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 119/246 (48%), Gaps = 27/246 (10%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG---SKDNLRKWIGHPRFELIRHDV 90
           RIL+TGGAGFIG HL   L+ +   EV V+D+         +   K++  P  EL   D+
Sbjct: 9   RILITGGAGFIGGHLARALVAS-GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDL 67
Query: 91  TEPLLIEVDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
           +     +V  +YHLA   S P  +K  P+  +  NV    ++L L   VG  ++++ ST 
Sbjct: 68  S-----DVRLVYHLASHKSVPRSFK-QPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTC 120
Query: 149 EVYG--DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI--EIRIARIF 204
           EVYG  D L  P+D       +P+  RS Y   K V   ++   H++  +  E+ I R F
Sbjct: 121 EVYGQADTLPTPED-------SPLSPRSPYAASK-VGLEMVAGAHQRASVAPEVGIVRFF 172
Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
           N YGP    D   +V    A  +    L V+  G Q R F Y++D+VD L+ L       
Sbjct: 173 NVYGPGERPD--ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPS 230
Query: 265 PINIGN 270
            +N G+
Sbjct: 231 VVNFGS 236

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 35/283 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
           M+IL+TGGAGFIGS +V  +++N ++ V+ +D   + G+ ++L       R+     D+ 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 92  EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---- 140
           +   I       + D + HLA  +        P   I+TN++GT  +L +A++  +    
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 141 ------RILLTSTSEVYGDPLVHPQDES------YWGNVNPIGVRSCYDEGKRVAETLMF 188
                 R    ST EVYGD L HP +         +         S Y   K  ++ L+ 
Sbjct: 121 DKKNNFRFHHISTDEVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179
Query: 189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS 248
            + R +G+   +    N YGP    +  +++   I  A+ G+PL +   G Q R + YV 
Sbjct: 180 AWRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237
Query: 249 DMVDGL-IRLMEGENTGPINIGNPGE-------FTMLELAENV 283
           D    L + + EG+     NIG   E       FT+ +L + +
Sbjct: 238 DHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEI 280

>pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 120/272 (44%), Gaps = 24/272 (8%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
           +IL+TGGAGFIGS LV  ++    + V+VVD   + G+  +L       RF   + D+ +
Sbjct: 3   KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62
Query: 93  PLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA---------- 135
              +       + D + HLA  +        P   I+TN++GT  +L  A          
Sbjct: 63  RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122
Query: 136 KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
           K+   R    ST EVYGD  +H  D+ ++    P    S Y   K  ++ L+  + R +G
Sbjct: 123 KKSAFRFHHISTDEVYGD--LHSTDD-FFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
           +   I    N YGP    +  +++   I  A+ G+ L V   G Q R + YV D    L 
Sbjct: 180 LPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALY 237
Query: 256 RLMEGENTGPI-NIGNPGEFTMLELAENVKEV 286
            +      G   NIG   E   L++ E + E+
Sbjct: 238 CVATTGKVGETYNIGGHNERKNLDVVETICEL 269

>pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379

Iteration: 1
 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 23/291 (7%)
Query: 8   GNHNSASKPPPTPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66
           G  N       T   L   +++ S N++I +TG  GFI SH+  +L ++E + VI  D  
Sbjct: 4   GTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRL-KHEGHYVIASD-- 60
Query: 67  FTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPASPI-FYKYNPVKTIK 122
                +++ + +    F L+   V E  L     VD +++LA     + F + N    + 
Sbjct: 61  -WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMY 119
Query: 123 TNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD------PLVHPQDESYWGNVNPIGVRSC 175
            N + + NM+  A+  G  R    S++ +Y +        V  ++   W    P   +  
Sbjct: 120 NNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA 175
Query: 176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVS--NFIAQA-IRGEPL 232
           Y   K   E L   Y++  GIE RI R  N YGP      GR  +   F  +A    +  
Sbjct: 176 YGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREAAPAAFCRKAQTSTDRF 235
Query: 233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENV 283
            +   G QTRSF ++ + V+G++RL + +   P+NIG+    +M E+AE V
Sbjct: 236 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 286

>pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 23/291 (7%)
Query: 8   GNHNSASKPPPTPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66
           G  N       T   L   +++ S N++I +TG  GFI SH+  +L ++E + VI  D  
Sbjct: 4   GTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRL-KHEGHYVIASD-- 60
Query: 67  FTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPASPI-FYKYNPVKTIK 122
                +++ + +    F L+   V E  L     VD +++LA     + F + N    + 
Sbjct: 61  -WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMY 119
Query: 123 TNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD------PLVHPQDESYWGNVNPIGVRSC 175
            N + + NM+  A+  G  R    S++ +Y +        V  ++   W    P   +  
Sbjct: 120 NNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA 175
Query: 176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQA-IRGEPL 232
           Y   K   E L   Y++  GIE RI R  N YGP      GR    + F  +A    +  
Sbjct: 176 YGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF 235
Query: 233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENV 283
            +   G QTRSF ++ + V+G++RL + +   P+NIG+    +M E+AE V
Sbjct: 236 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 286

>pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 131/291 (45%), Gaps = 23/291 (7%)
Query: 8   GNHNSASKPPPTPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66
           G  N       T   L   +++ S N++I +TG  GFI SH+  +L ++E + VI  D  
Sbjct: 4   GTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRL-KHEGHYVIASD-- 60
Query: 67  FTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPASPI-FYKYNPVKTIK 122
                +++ + +    F L+   V E  L     VD +++LA     + F + N    + 
Sbjct: 61  -WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMY 119
Query: 123 TNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD------PLVHPQDESYWGNVNPIGVRSC 175
            N + + NM+  A+  G  R    S++ +Y +        V  ++   W    P   +  
Sbjct: 120 NNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA 175
Query: 176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQA-IRGEPL 232
           Y   +   E L   Y++  GIE RI R  N YGP      GR    + F  +A    +  
Sbjct: 176 YGLERLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF 235
Query: 233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENV 283
            +   G QTRSF ++ + V+G++RL + +   P+NIG+    +M E+AE V
Sbjct: 236 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 286

>pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 131/291 (45%), Gaps = 23/291 (7%)
Query: 8   GNHNSASKPPPTPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66
           G  N       T   L   +++ S N++I +TG  GFI SH+  +L ++E + VI  D  
Sbjct: 4   GTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRL-KHEGHYVIASD-- 60
Query: 67  FTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPASPI-FYKYNPVKTIK 122
                +++ + +    F L+   V E  L     VD +++LA     + F + N    + 
Sbjct: 61  -WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMY 119
Query: 123 TNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD------PLVHPQDESYWGNVNPIGVRSC 175
            N + + NM+  A+  G  R    S++ +Y +        V  ++   W    P   +  
Sbjct: 120 NNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA 175
Query: 176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQA-IRGEPL 232
           +   K   E L   Y++  GIE RI R  N YGP      GR    + F  +A    +  
Sbjct: 176 FGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF 235
Query: 233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENV 283
            +   G QTRSF ++ + V+G++RL + +   P+NIG+    +M E+AE V
Sbjct: 236 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 286

>pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 33/274 (12%)
Query: 32  NMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGS--KDNLRKWIGHPRF----- 83
           N  IL+TGGAGF+GS+L     EN  K +V+V+D + + +   +N    +GH +      
Sbjct: 10  NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFK 69
Query: 84  -ELIRHDVTEPL------LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
            E+I  D+  PL       +  D ++H A  +       N    +KTN    LN+L +A+
Sbjct: 70  GEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTM--LNQELVMKTNYQAFLNLLEIAR 127
Query: 137 RVGARILLTSTSEVYGD---PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
              A+++  S++ VYG+   P V  ++ES   NV     + C DE            H  
Sbjct: 128 SKKAKVIYASSAGVYGNTKAPNVVGKNES-PENVYGFS-KLCMDE--------FVLSHSN 177
Query: 194 HGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
             +++ + R FN YGPR    +    +V      A+  + + +   G Q R F Y+ D++
Sbjct: 178 DNVQVGL-RYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236
Query: 252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKE 285
              ++ M+ + +G  N+G     +  E+   +KE
Sbjct: 237 QANVKAMKAQKSGVYNVGYSQARSYNEIVSILKE 270

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 119/269 (44%), Gaps = 24/269 (8%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
           I+VTGGAGFIGS+ V  +  N  +  V V+D   + G+K NL   +G  R EL+  D+ +
Sbjct: 7   IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILG-DRVELVVGDIAD 65
Query: 93  PLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
             L++      D I H A  +       +P   I TN IGT  +L  A++   R    ST
Sbjct: 66  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 125
Query: 148 SEVYGD-PLVHP---------QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
            EVYGD PL            +  +   N NP    S Y   K  ++ ++  + R  G++
Sbjct: 126 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNP---SSPYSSTKAASDLIVKAWVRSFGVK 182
Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
             I+   N YGP  +I+  + +   I   + G    +   G   R + + +D   G+  +
Sbjct: 183 ATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 240
Query: 258 MEGENTGPIN-IGNPGEFTMLELAENVKE 285
           +     G    IG  GE    E+ E + E
Sbjct: 241 LTKGRMGETYLIGADGEKNNKEVLELILE 269

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 116/230 (50%), Gaps = 15/230 (6%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MR+LVTGGAGFIGSH+V+ L+     EV V+DN  TG ++N+ K +   R +L   +  E
Sbjct: 1   MRVLVTGGAGFIGSHIVEDLLAR-GLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVE 59
Query: 93  PLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS-- 148
               E     + H A  AS      +PV   + N++G LN+L   ++ G   L+ +++  
Sbjct: 60  RAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGG 119
Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
            +YG+     + E  W    P   +S Y   K   E  +  Y + +G++    R  N YG
Sbjct: 120 AIYGEVPEGERAEETW----PPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYG 175
Query: 209 PRMNI-DDGRVVSNFIAQAIRGEPLTVQA---PGTQ--TRSFCYVSDMVD 252
           PR +   +  VV+ F  + ++G P+T+ A   PG +   R + YV D+ +
Sbjct: 176 PRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE 225

>pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364

Iteration: 1
 Score = 77.4 bits (189), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 26/252 (10%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
           L+TG AGFIGS+L++KL++  +  VI +DN+ TG + NL          +W    RF  I
Sbjct: 42  LITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQW---SRFCFI 97
Query: 87  RHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
             D+      E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    +
Sbjct: 98  EGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQ 157
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
                ++S  YGD    P+ E   G  NP+   S Y   K V E     Y R +G +   
Sbjct: 158 SFTYAASSSTYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIG 212
Query: 201 ARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            R FN +G R + +     V+  + A  ++G+ + +   G  +R FCY+ +++   I   
Sbjct: 213 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 272
Query: 259 EGENTGPINIGN 270
             +++   NI N
Sbjct: 273 LAKDSAKDNIYN 284

>pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 26/252 (10%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
           L+TG AGFIGS+L++KL++  +  VI +DN+ TG + NL          +W    RF  I
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQW---SRFCFI 84
Query: 87  RHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
             D+      E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    +
Sbjct: 85  EGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQ 144
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
                ++S  YGD    P+ E   G  NP+   S Y   K V E     Y R +G +   
Sbjct: 145 SFTYAASSSTYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIG 199
Query: 201 ARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            R FN +G R + +     V+  + A  ++G+ + +   G  +R FCY+ +++   I   
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259
Query: 259 EGENTGPINIGN 270
             +++   NI N
Sbjct: 260 LAKDSAKDNIYN 271

>pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 26/252 (10%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
           L+TG AGFIGS+L++KL++  +  VI +DN+ TG + NL          +W    RF  I
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQW---SRFCFI 84
Query: 87  RHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
             D+      E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    +
Sbjct: 85  EGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQ 144
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
                ++S  YGD    P+ E   G  NP+   S Y   K V E     Y R +G +   
Sbjct: 145 SFTYAASSSTYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIG 199
Query: 201 ARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            R FN +G R + +     V+  + A  ++G+ + +   G  +R FCY+ +++   I   
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259
Query: 259 EGENTGPINIGN 270
             +++   NI N
Sbjct: 260 LAKDSAKDNIYN 271

>pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 26/252 (10%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
           L+TG AGFIGS+L++KL++  +  VI +DN+ TG + NL          +W    RF  I
Sbjct: 23  LITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQW---SRFCFI 78
Query: 87  RHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
             D+      E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    +
Sbjct: 79  EGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQ 138
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
                ++S  YGD    P+ E   G  NP+   S Y   K V E     Y R +G +   
Sbjct: 139 SFTYAASSSTYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIG 193
Query: 201 ARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            R FN +G R + +     V+  + A  ++G+ + +   G  +R FCY+ +++   I   
Sbjct: 194 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 253
Query: 259 EGENTGPINIGN 270
             +++   NI N
Sbjct: 254 LAKDSAKDNIYN 265

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIGHPRFELI------ 86
           ++L+TGG GF+GS+L    + ++  ++IV DN    G+ DNL        FE +      
Sbjct: 3   KLLITGGCGFLGSNLASFAL-SQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 61
Query: 87  RHDVTEPLLIEV-DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 143
           ++DVT  +   + D  +HLA   +      NP    + NV GTLN+L   ++  +   I+
Sbjct: 62  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 121
Query: 144 LTSTSEVYGDPLVHPQDESY-----------WGNVNPIGVRSCYDEGKRVAETLMFDYHR 192
            +ST++VYGD   +  +E+            +     +   S Y   K  A+  M DY R
Sbjct: 122 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 181
Query: 193 QHGIEIRIARIFNTYGPRM--NIDDGRVVSNFIAQAIR-----GEPLTVQAPGTQTRSFC 245
             G+   + R  + YG R     D G  V  F  +A+       +P T+   G Q R   
Sbjct: 182 IFGLNTVVFRHSSMYGGRQFATYDQGW-VGWFCQKAVEIKNGINKPFTISGNGKQVRDVL 240
Query: 246 YVSDMV 251
           +  DM+
Sbjct: 241 HAEDMI 246

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 26/233 (11%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
           L+TG AGFIGS+L++ L++ ++ +V+ +DN+ TG + NL         ++W     F+ I
Sbjct: 31  LITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQW---SNFKFI 86
Query: 87  RHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           + D+            VD + H A   S      +P+ +  TN+ G LNML  A+    +
Sbjct: 87  QGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQ 146
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
                ++S  YGD    P+ E   G   P+   S Y   K V E     + R +G     
Sbjct: 147 SFTYAASSSTYGDHPGLPKVEDTIG--KPL---SPYAVTKYVNELYADVFSRCYGFSTIG 201
Query: 201 ARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
            R FN +G R + +     V+  + +  I+G+ + +   G  +R FCY+ + V
Sbjct: 202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV 254

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 119/256 (46%), Gaps = 37/256 (14%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +ST+ VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSTATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNID---DGRVVSN----FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D   D + + N    +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLME 259
           + +V D+ DG +  ME
Sbjct: 233 YIHVMDLADGHVVAME 248

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 111/249 (44%), Gaps = 29/249 (11%)
Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           +MR L+TG AGF+G +L + L E +  EV      F  S++N  K    P  E+I  D+ 
Sbjct: 12  SMRALITGVAGFVGKYLANHLTE-QNVEV------FGTSRNNEAKL---PNVEMISLDIM 61
Query: 92  EPLL-------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK--RVGARI 142
           +          I+ D I+HLA  +S      N   T  TNV GTL++L   +   +  RI
Sbjct: 62  DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRI 121
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           L   +SE YG  ++ P+ ES     N +   S Y   K     L   Y + +G++I   R
Sbjct: 122 LTIGSSEEYG--MILPE-ESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTR 178
Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAI-----RGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
            FN  GP  ++  G V  +F  Q +     + EP+         R F  V D+V     L
Sbjct: 179 TFNHIGPGQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLL 236
Query: 258 MEGENTGPI 266
            +   TG +
Sbjct: 237 SQYGKTGDV 245

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 37/256 (14%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S++ VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNID---DGRVVSN----FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D   D + + N    +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLME 259
           + +V D+ DG +  ME
Sbjct: 233 YIHVMDLADGHVVAME 248

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 37/256 (14%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S++ VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNID---DGRVVSN----FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D   D + + N    +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLME 259
           + +V D+ DG +  ME
Sbjct: 233 YIHVMDLADGHVVAME 248

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 37/256 (14%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S++ VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNID---DGRVVSN----FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D   D + + N    +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLME 259
           + +V D+ DG +  ME
Sbjct: 233 YIHVMDLADGHVVAME 248

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 37/256 (14%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S + VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSAATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNID---DGRVVSN----FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D   D + + N    +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLME 259
           + +V D+ DG +  ME
Sbjct: 233 YIHVMDLADGHVVAME 248

>pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 120/282 (42%), Gaps = 45/282 (15%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK----WIGHPRFELIRHDV 90
           IL+ GGAG+IGSH V KL++ E   V+VVDN  TG +D + +    + G  R +    DV
Sbjct: 4   ILICGGAGYIGSHAVKKLVD-EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDV 62
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 149
                IE   + H A  +        P++    NV G L +L +       + + +ST+ 
Sbjct: 63  FTQENIEA--VMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAA 120
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
            YG+  V    E      NP    + Y E K   E ++  Y +   +  +I R FN  G 
Sbjct: 121 TYGEVDVDLITEETM--TNPT---NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGA 175
Query: 210 RMN---IDDGRVVSNFIAQAIRGEPLTVQAP------------------GTQTRSFCYVS 248
             N    +D R  ++ I       PL +Q                    GT  R + +V 
Sbjct: 176 TPNGIIGEDHRPETHLI-------PLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE 228
Query: 249 DMVD----GLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           D+V     GL  L  G  +   N+GN   F++ E+ + V+EV
Sbjct: 229 DLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREV 270

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 37/256 (14%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S + VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSAATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNID---DGRVVSN----FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D   D + + N    +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLME 259
           + +V D+ DG +  ME
Sbjct: 233 YIHVMDLADGHVVAME 248

>pdb|4B8W|A Chain A, Crystal Structure Of Human Gdp-L-Fucose Synthase With Bound Nadp And Gdp, Tetragonal Crystal Form Length = 319

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 121/280 (43%), Gaps = 28/280 (10%)
Query: 28  FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR 87
           +FQS MRILVTGG+G +G   + K++ +    +   D  F  SKD           +L  
Sbjct: 3   YFQS-MRILVTGGSGLVGK-AIQKVVADGAG-LPGEDWVFVSSKDA----------DLTD 49
Query: 88  HDVTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
              T  L  +V    + HLA     +F   KYN +   + NV    N+L  A  VGAR +
Sbjct: 50  TAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKV 108
Query: 144 LTSTSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           ++  S  ++ D   +P DE+   N  P      Y   KR+ +     Y +Q+G       
Sbjct: 109 VSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVI 168
Query: 203 IFNTYGPR--MNIDDGRVVSNFIAQA----IRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
             N +GP    NI+DG V+   I +       G  LTV   G   R F Y  D+    I 
Sbjct: 169 PTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 228
Query: 257 LM-EGENTGPI--NIGNPGEFTMLELAENVKEVNFYLGRL 293
           ++ E     PI  ++G   E ++ E AE V E   + G +
Sbjct: 229 VLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEV 268

>pdb|4B8Z|A Chain A, Crystal Structure Of Human Gdp-l-fucose Synthase With Bound Nadp And Gdp, Rhombohedral Crystal Form Length = 320

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 121/280 (43%), Gaps = 28/280 (10%)
Query: 28  FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR 87
           +FQS MRILVTGG+G +G   + K++ +    +   D  F  SKD           +L  
Sbjct: 4   YFQS-MRILVTGGSGLVGK-AIQKVVADGAG-LPGEDWVFVSSKDA----------DLTD 50
Query: 88  HDVTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
              T  L  +V    + HLA     +F   KYN +   + NV    N+L  A  VGAR +
Sbjct: 51  TAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKV 109
Query: 144 LTSTSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           ++  S  ++ D   +P DE+   N  P      Y   KR+ +     Y +Q+G       
Sbjct: 110 VSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVI 169
Query: 203 IFNTYGPR--MNIDDGRVVSNFIAQA----IRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
             N +GP    NI+DG V+   I +       G  LTV   G   R F Y  D+    I 
Sbjct: 170 PTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 229
Query: 257 LM-EGENTGPI--NIGNPGEFTMLELAENVKEVNFYLGRL 293
           ++ E     PI  ++G   E ++ E AE V E   + G +
Sbjct: 230 VLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEV 269

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 37/256 (14%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S + VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSVATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNID---DGRVVSN----FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D   D + + N    +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLME 259
           + +V D+ DG +  ME
Sbjct: 233 YIHVMDLADGHVVAME 248

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 37/256 (14%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S++ VYGD    P  ES+     P G  +S + + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNID---DGRVVSN----FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D   D + + N    +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLME 259
           + +V D+ DG +  ME
Sbjct: 233 YIHVMDLADGHVVAME 248

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 37/256 (14%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S + VYGD    P  ES+     P G  +S + + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSAATVYGDQPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNID---DGRVVSN----FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D   D + + N    +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLME 259
           + +V D+ DG +  ME
Sbjct: 233 YIHVMDLADGHVVAME 248

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 37/256 (14%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S + VYGD    P  ES+     P G  +S + + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSAATVYGDNPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNID---DGRVVSN----FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D   D + + N    +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLME 259
           + +V D+ DG +  ME
Sbjct: 233 YIHVMDLADGHVVAME 248

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 30/272 (11%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S+MRIL+TGGAG +GS+L++  +  + +E++V+DN+ TG ++ L    G     +I   V
Sbjct: 19  SHMRILITGGAGCLGSNLIEHWLP-QGHEILVIDNFATGKREVLPPVAG---LSVIEGSV 74
Query: 91  TEPLLIE--VDQIYHLACPASPIFYKYNP---VKTIKTNVIGTLNMLGLAKRVGARILLT 145
           T+  L+E   D         S   YK +P    +   TNV G++N+   A + G + LL 
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAAAYK-DPDDWAEDAATNVQGSINVAKAASKAGVKRLLN 133
Query: 146 -STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
             T+  YG P   P         +P    + Y   K   E  +        + +   R+ 
Sbjct: 134 FQTALCYGRPATVPIPID-----SPTAPFTSYGISKTAGEAFLM----MSDVPVVSLRLA 184
Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD-GLIRLMEGENT 263
           N  GPR+ I     +  F  +   G+           R F  +SD +    + L EG  T
Sbjct: 185 NVTGPRLAIGP---IPTFYKRLKAGQKCFCS---DTVRDFLDMSDFLAIADLSLQEGRPT 238
Query: 264 GPINIGNPGEFTMLELAENVKEVNFYLGRLLV 295
           G  N+      ++ E+ + V +   Y+G  L 
Sbjct: 239 GVFNVSTGEGHSIKEVFDVVLD---YVGATLA 267

>pdb|3M2P|A Chain A, The Crystal Structure Of Udp-N-Acetylglucosamine 4-Epimerase From Bacillus Cereus Length = 311

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 106/260 (40%), Gaps = 32/260 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPR---FELIRHD 89
           ++I VTGG GF+G ++V+ + +N+ N  I+           L + IG+     +E    D
Sbjct: 3   LKIAVTGGTGFLGQYVVESI-KNDGNTPII-----------LTRSIGNKAINDYEYRVSD 50
Query: 90  VTEPLLI----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILL 144
            T   LI    +VD + HLA            +     N I T N+         + I+ 
Sbjct: 51  YTLEDLINQLNDVDAVVHLAATRGS----QGKISEFHDNEILTQNLYDACYENNISNIVY 106
Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
            ST   Y D    P +E       P+     Y   K   E +   Y R+ G+ I+  R  
Sbjct: 107 ASTISAYSDETSLPWNEKEL----PLP-DLXYGVSKLACEHIGNIYSRKKGLCIKNLRFA 161
Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-T 263
           + YG   N  +   ++ F  QA  GE LT+ A     R F Y  D    +I  ++ E  +
Sbjct: 162 HLYG--FNEKNNYXINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS 219
Query: 264 GPINIGNPGEFTMLELAENV 283
           G  NIG+    T  E+A  +
Sbjct: 220 GTFNIGSGDALTNYEVANTI 239

>pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRKWIGHPRFELIRH 88
           S+MR+LV GGAG+IGSH V  L+ +  + V++VD+     G  D++       R +L + 
Sbjct: 1   SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVAR-KLQQS 59
Query: 89  DVTEPLLIE-------------------------VDQIYHLACPASPIFYKYNPVKTIKT 123
           D  +P   +                         +D + H+    +      +P+K    
Sbjct: 60  DGPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDN 119
Query: 124 NVIGTLNML-GLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV------RSCY 176
           NV+G L +L  +      +I+ +S++ ++G+P +     S   N  PI +       S Y
Sbjct: 120 NVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTM----GSVSTNAEPIDINAKKSPESPY 175
Query: 177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG 216
            E K +AE ++ D    +GI+    R FN  G   + D G
Sbjct: 176 GESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIG 215

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 32/263 (12%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           ++ +TG  G IGSH+ + L+E   ++V+ +DN+ TG +++L+    HP    +   + + 
Sbjct: 23  KVFITGICGQIGSHIAELLLE-RGDKVVGIDNFATGRREHLKD---HPNLTFVEGSIADH 78
Query: 94  LLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILL 144
            L+       + D + H A         YN      TN +G  N++  AK+  VG R + 
Sbjct: 79  ALVNQLIGDLQPDAVVHTAASYKDPDDWYN---DTLTNCVGGSNVVQAAKKNNVG-RFVY 134
Query: 145 TSTSEVYG-DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
             T+  YG  P+  P    +  N       S Y   K   E    DY    G++    R+
Sbjct: 135 FQTALCYGVKPIQQPVRLDHPRNP----ANSSYAISKSANE----DYLEYSGLDFVTFRL 186
Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
            N  GPR N+     +  F  +   G+   V       R F +V D+    +R ++G   
Sbjct: 187 ANVVGPR-NVSGPLPI--FFQRLSEGKKCFVT---KARRDFVFVKDLARATVRAVDGVGH 240
Query: 264 GPINIGNPGEFTMLELAENVKEV 286
           G  +  +  +  + EL + V E 
Sbjct: 241 GAYHFSSGTDVAIKELYDAVVEA 263

>pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 113/285 (39%), Gaps = 36/285 (12%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L   +S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            +Y      P  ES    G + P      Y   K     L   Y+RQ+G + R     N 
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           YGP  N    +  V+   +     A A +   + V   GT  R F +V DM    I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 ------GENTGP----INIGNPGEFTMLELAENVKEVNFYLGRLL 294
                  ENT P    IN+G   + T+ ELA+ + +V  Y GR++
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVV 271

>pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 112/285 (39%), Gaps = 36/285 (12%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L   +S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            +Y      P  ES    G + P      Y   K     L   Y+RQ+G + R     N 
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           YGP  N    +  V+   +     A A     + V   GT  R F +V DM    I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 G------ENTGP----INIGNPGEFTMLELAENVKEVNFYLGRLL 294
                  ENT P    IN+G   + T+ ELA+ + +V  Y GR++
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVV 271

>pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 36/285 (12%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L   +S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            +Y      P  ES    G + P      Y   +     L   Y+RQ+G + R     N 
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIARIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           YGP  N    +  V+   +     A A     + V   GT  R F +V DM    I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQSAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 G------ENTGP----INIGNPGEFTMLELAENVKEVNFYLGRLL 294
                  ENT P    IN+G   + T+ ELA+ + +V  Y GR++
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVV 271

>pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 36/285 (12%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L   +S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            +Y      P  ES    G + P      Y   K     L   Y+RQ+G + R     N 
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           YGP  N    +  V+   +     A A     + V   GT  R F +V DM    I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 ------GENTGP----INIGNPGEFTMLELAENVKEVNFYLGRLL 294
                  ENT P    IN+G   + T+ +LA+ + +V  Y GR++
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRDLAQTIAKVVGYKGRVV 271

>pdb|1E7Q|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S107a Length = 321

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 111/285 (38%), Gaps = 36/285 (12%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L    S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGAS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            +Y      P  ES    G + P      Y   K     L   Y+RQ+G + R     N 
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           YGP  N    +  V+   +     A A     + V   GT  R F +V DM    I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQSAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 G------ENTGP----INIGNPGEFTMLELAENVKEVNFYLGRLL 294
                  ENT P    IN+G   + T+ ELA+ + +V  Y GR++
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVV 271

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 45/292 (15%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGSK---DNLRK-------WIGH 80
           ++LVTGGAG+IGSH V +L+E     V V+DN+   F G     ++LR+        +  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 81  PRFELIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
              +++     + L  +     + H A   +       P+   + N+ GT+ +L + K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY--WGNVNPIGVRSCYDEGKRVAETLMFDY-HRQH 194
           G + ++ +S++ VYG+P   P DE++   G  NP      Y + K   E ++ D      
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP------YGKSKFFIEEMIRDLCQADK 176
Query: 195 GIEIRIARIFNTYGPRMN---IDDGRVVSN----FIAQAI--RGEPLTV------QAPGT 239
              + + R FN  G   +    +D + + N    +++Q    R E L V         GT
Sbjct: 177 TWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 240 QTRSFCYVSDMVDGLI----RLMEGENTGPINIGNPGEFTMLELAENVKEVN 287
             R + +V D+  G I    +L E       N+G    +++L++ + +++ +
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS 288

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 39/257 (15%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW-------IGHPRFELIR 87
           +LVTGGAG+IGSH V +L+EN   + +V DN    + D++ +        I     +L  
Sbjct: 14  VLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 72
Query: 88  HDVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILL 144
               E +  E  +D + H A   +       P++    N++GT+ +L L ++   ++ + 
Sbjct: 73  RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVF 132
Query: 145 TSTSEVYGDPLVHPQ-----DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR--QHGIE 197
           +S++ VYGD    P      +E   G  NP      Y   K   E ++ D +   +   +
Sbjct: 133 SSSATVYGDATRFPNMIPIPEECPLGPTNP------YGHTKYAIENILNDLYNSDKKSWK 186
Query: 198 IRIARIFNTYGPR---MNIDDGRVVSN----FIAQAI--RGEPLTV------QAPGTQTR 242
             I R FN  G     +  +D   + N    ++AQ    R E L +         GT  R
Sbjct: 187 FAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR 246
Query: 243 SFCYVSDMVDGLIRLME 259
            + +V D+  G I  ++
Sbjct: 247 DYIHVVDLAKGHIAALQ 263

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 45/292 (15%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGSK---DNLRK-------WIGH 80
           ++LVTGGAG+IGSH V +L+E     V V+DN+   F G     ++LR+        +  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 81  PRFELIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
              +++     + L  +     + H A   +       P+   + N+ GT+ +L + K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY--WGNVNPIGVRSCYDEGKRVAETLMFDY-HRQH 194
           G + ++ +S++ VYG+P   P DE++   G  NP      Y + K   E ++ D      
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP------YGKSKFFIEEMIRDLCQADK 176
Query: 195 GIEIRIARIFNTYGPRMN---IDDGRVVSN----FIAQAI--RGEPLTV------QAPGT 239
              + + R FN  G   +    +D + + N    +++Q    R E L V         GT
Sbjct: 177 TWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 240 QTRSFCYVSDMVDGLI----RLMEGENTGPINIGNPGEFTMLELAENVKEVN 287
             R + +V D+  G I    +L E       N+G    +++L++ + +++ +
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS 288

>pdb|1E7R|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y136e Length = 321

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 116/289 (40%), Gaps = 44/289 (15%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L   +S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAE----TLMFDYHRQHGIEIRIAR 202
            +Y      P  ES    G + P       +E + +A+     L   Y+RQ+G + R   
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEPT------NEPEAIAKIAGIKLCESYNRQYGRDYRSVM 162
Query: 203 IFNTYGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
             N YGP  N    +  V+   +     A A     + V   GT  R F +V DM    I
Sbjct: 163 PTNLYGPHDNFHPSNSHVIPALLRRFHEATAQSAPDVVVWGSGTPMREFLHVDDMAAASI 222
Query: 256 RLMEG------ENTGP----INIGNPGEFTMLELAENVKEVNFYLGRLL 294
            +ME       ENT P    IN+G   + T+ ELA+ + +V  Y GR++
Sbjct: 223 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVV 271

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 45/292 (15%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGSK---DNLRK-------WIGH 80
           ++LVTGGAG+IGSH V +L+E     V V+DN+   F G     ++LR+        +  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 81  PRFELIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
              +++     + L  +     + H A   +       P+   + N+ GT+ +L + K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY--WGNVNPIGVRSCYDEGKRVAETLMFDY-HRQH 194
           G + ++ +S++ VYG+P   P DE++   G  NP      Y + K   E ++ D      
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP------YGKSKFFIEEMIRDLCQADK 176
Query: 195 GIEIRIARIFNTYGPRMN---IDDGRVVSN----FIAQAI--RGEPLTV------QAPGT 239
                + R FN  G   +    +D + + N    +++Q    R E L V         GT
Sbjct: 177 TWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 240 QTRSFCYVSDMVDGLI----RLMEGENTGPINIGNPGEFTMLELAENVKEVN 287
             R + +V D+  G I    +L E       N+G    +++L++ + +++ +
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS 288

>pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 52/283 (18%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTGGAG+IGSH   +L+ +   +V++ DN     ++ +       R E I      P 
Sbjct: 8   ILVTGGAGYIGSHTAVELLAH-GYDVVIADNLVNSKREAI------ARIEKITGKT--PA 58
Query: 95  LIEVDQIYHLACP----ASPIFYK--YNPVKTIKTNVIGTLNMLG------------LAK 136
             E D     A      A PI     +  +K +  +V   +                + +
Sbjct: 59  FHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRE 118
Query: 137 RVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-G 195
           R   RI+ +S++ VYG P   P DE++     P+   + Y + K +AE ++ D       
Sbjct: 119 RAVKRIVFSSSATVYGVPERSPIDETF-----PLSATNPYGQTKLMAEQILRDVEAADPS 173
Query: 196 IEIRIARIFNTYGPR----MNIDDGRVVSN---FIAQAIRG--EPLTV------QAPGTQ 240
             +   R FN  G      +  D   + +N   ++AQ   G  E L V         GT 
Sbjct: 174 WRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTG 233
Query: 241 TRSFCYVSDMVDGLIRLMEG----ENTGPINIGNPGEFTMLEL 279
            R + +V D+  G I  ++     + +  +N+G    +++LE+
Sbjct: 234 VRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEV 276

>pdb|2X6T|A Chain A, Agme Bound To Adp-B-Mannose Length = 357

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 30/250 (12%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------NLRKWIGHPRFELIRH 88
           I+VTGGAGFIGS++V  L +    +++VVDN   G+K       N+  ++    F LI+ 
Sbjct: 49  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDF-LIQI 107
Query: 89  DVTEPLLIEVDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
              E    +V+ I+H  AC ++    +++    +  N   +  +L          L  S+
Sbjct: 108 MAGEEFG-DVEAIFHEGACSSTT---EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 163
Query: 148 SEVYGDPLVH-PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIAR 202
           +  YG       +   Y   +N  G           ++ L  +Y RQ       +I   R
Sbjct: 164 AATYGGRTSDFIESREYEKPLNVFG----------YSKFLFDEYVRQILPEANSQIVGFR 213
Query: 203 IFNTYGPRMNIDD--GRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
            FN YGPR         V  +   Q   GE P   +      R F YV D+ D  +  +E
Sbjct: 214 YFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE 273
Query: 260 GENTGPINIG 269
              +G  N+G
Sbjct: 274 NGVSGIFNLG 283

>pdb|1EQ2|A Chain A, The Crystal Structure Of Adp-L-Glycero-D-Mannoheptose 6- Epimerase Length = 310

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 101/249 (40%), Gaps = 28/249 (11%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------NLRKWIGHPRFELIRH 88
           I+VTGGAGFIGS++V  L +    +++VVDN   G+K       N+  ++    F LI+ 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDF-LIQI 60
Query: 89  DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148
              E    +V+ I+H    +S    +++    +  N   +  +L          L  S++
Sbjct: 61  MAGEEFG-DVEAIFHEGAXSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSA 117
Query: 149 EVYGDPLVH-PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARI 203
             YG       +   Y   +N  G           ++ L  +Y RQ       +I   R 
Sbjct: 118 ATYGGRTSDFIESREYEKPLNVYG----------YSKFLFDEYVRQILPEANSQIVGFRY 167
Query: 204 FNTYGPRMNIDD--GRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
           FN YGPR         V  +   Q   GE P   +      R F YV D+ D  +  +E 
Sbjct: 168 FNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 227
Query: 261 ENTGPINIG 269
             +G  N+G
Sbjct: 228 GVSGIFNLG 236

>pdb|1WVG|A Chain A, Structure Of Cdp-D-Glucose 4,6-Dehydratase From Salmonella Typhi Length = 359

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 52/276 (18%)
Query: 27  KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS------------KDNL 74
           K F    R+ VTG  GF GS L   L E       +V  Y   +             D +
Sbjct: 4   KNFWQGKRVFVTGHTGFKGSWLSLWLTEMGA----IVKGYALDAPTVPSLFEIVRLNDLM 59
Query: 75  RKWIGHPR-FELIRHDVTEPLLIEVDQIYHLAC-PASPIFYKYNPVKTIKTNVIGTLNML 132
              IG  R FE +R  + E    + + ++H+A  P   + Y+  P+KT  TNV+GT+++L
Sbjct: 60  ESHIGDIRDFEKLRSSIAE---FKPEIVFHMAAQPLVRLSYE-QPIKTYSTNVMGTVHLL 115
Query: 133 GLAKRVG-ARILLTSTSEVYGDPLVHPQDESYWG--NVNPIGVRSCYDEGKRVAETLMFD 189
              K+VG  + ++  TS+   D       E  WG     P+G    Y   K  AE +   
Sbjct: 116 ETVKQVGNIKAVVNITSDKCYD-----NREWVWGYRENEPMGGYDPYSNSKGCAELVASA 170
Query: 190 Y---------HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           +         + QHG+ +   R  N  G      D R++ + +      + + ++ P + 
Sbjct: 171 FRNSFFNPANYEQHGVGLASVRAGNVIGGGDWAKD-RLIPDILRSFENNQQVIIRNPYS- 228
Query: 241 TRSFCYVSDMVDGLI-----------RLMEGENTGP 265
            R + +V + + G I           +  EG N GP
Sbjct: 229 IRPWQHVLEPLSGYIVVAQRLYTEGAKFSEGWNFGP 264

>pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase In Complex With Nadph And Udp-Glcnac Length = 344

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           N  IL+TGG G  G   V K+++    + I+V +     +  +      PR      DV 
Sbjct: 21  NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVR 80
Query: 92  EP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
           +       L  VD   H A        +YNP++ IKTN++G  N++    +     ++  
Sbjct: 81  DLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIAL 140
Query: 147 TSEVYGDPL 155
           +++   +P+
Sbjct: 141 STDKAANPI 149

>pdb|2ZKL|A Chain A, Crystal Structure Of Capsular Polysaccharide Assembling Protein Capf From Staphylococcus Aureus Length = 369

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 92/234 (39%), Gaps = 48/234 (20%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M I++TG  GF+G +L                      K +L     H  FE+ R    E
Sbjct: 1   MNIVITGAKGFVGKNL----------------------KADLTSTTDHHIFEVHRQTKEE 38
Query: 93  PL---LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
            L   L++ D I HLA    P   K   +  + + +   L++L    +  A ILL+S+ +
Sbjct: 39  ELESALLKADFIVHLAGVNRPEHDKEFSLGNV-SYLDHVLDILTRNTKKPA-ILLSSSIQ 96
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
              D              NP G      E K   E L+ +Y  ++G  + I R  N +G 
Sbjct: 97  ATQD--------------NPYG------ESKLQGEQLLREYAEEYGNTVYIYRWPNLFGK 136
Query: 210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
               +   V++ F  +  R E + V     +  +  YV D+V  + R +EG  T
Sbjct: 137 WCKPNYNSVIATFCYKIARNEEIQVNDRNVEL-TLNYVDDIVAEIKRAIEGTPT 189

>pdb|1QRR|A Chain A, Crystal Structure Of Sqd1 Protein Complex With Nad And Udp- Glucose Length = 394

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 119/319 (37%), Gaps = 67/319 (21%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY----------------FTGSKDNLRK 76
           R++V GG G+ G      L  ++KN EV +VDN                      D + +
Sbjct: 3   RVMVIGGDGYCG--WATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60
Query: 77  W--IGHPRFELIRHDVTEPLLI-------EVDQIYHL----ACPASPIFYKYNPVKTIKT 123
           W  +     EL   D+ +   +       E D + H     + P S I  +   V T   
Sbjct: 61  WKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMI-DRSRAVYTQHN 119
Query: 124 NVIGTLNMLGLAKRVGARILLTS--TSEVYGDP-------------------LVHPQDES 162
           NVIGTLN+L   K  G    L    T   YG P                   L +P+  S
Sbjct: 120 NVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQAS 179
Query: 163 YWGNVNPIG-----VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-- 215
            + +++ +        +C   G R  +    +    +G++     +      R++ D   
Sbjct: 180 SFYHLSKVHDSHNIAFTCKAWGIRATD---LNQGVVYGVKTDETEMHEELRNRLDYDAVF 236
Query: 216 GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRLMEGENTGPINIGN--PG 272
           G  ++ F  QA  G PLTV   G QTR +  + D V  + I +      G   + N    
Sbjct: 237 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTE 296
Query: 273 EFTMLELAENVKEVNFYLG 291
           +F++ ELA  V +    LG
Sbjct: 297 QFSVNELASLVTKAGSKLG 315

>pdb|1I2B|A Chain A, Crystal Structure Of Mutant T145a Sqd1 Protein Complex With Nad And Udp-SulfoquinovoseUDP-Glucose Length = 404

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 119/319 (37%), Gaps = 67/319 (21%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY----------------FTGSKDNLRK 76
           R++V GG G+ G      L  ++KN EV +VDN                      D + +
Sbjct: 13  RVMVIGGDGYCG--WATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 70
Query: 77  W--IGHPRFELIRHDVTEPLLI-------EVDQIYHL----ACPASPIFYKYNPVKTIKT 123
           W  +     EL   D+ +   +       E D + H     + P S I  +   V T   
Sbjct: 71  WKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMI-DRSRAVYTQHN 129
Query: 124 NVIGTLNMLGLAKRVGARILLTSTSEV--YGDP-------------------LVHPQDES 162
           NVIGTLN+L   K  G    L     +  YG P                   L +P+  S
Sbjct: 130 NVIGTLNVLFAIKEFGEECHLVKLGAMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQAS 189
Query: 163 YWGNVNPIG-----VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-- 215
            + +++ +        +C   G R  +    +    +G++     +      R++ D   
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATD---LNQGVVYGVKTDETEMHEELRNRLDYDAVF 246
Query: 216 GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRLMEGENTGPINIGN--PG 272
           G  ++ F  QA  G PLTV   G QTR +  + D V  + I +      G   + N    
Sbjct: 247 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTE 306
Query: 273 EFTMLELAENVKEVNFYLG 291
           +F++ ELA  V +    LG
Sbjct: 307 QFSVNELASLVTKAGSKLG 325

>pdb|1I24|A Chain A, High Resolution Crystal Structure Of The Wild-Type Protein Sqd1, With Nad And Udp-Glucose Length = 404

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 119/319 (37%), Gaps = 67/319 (21%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY----------------FTGSKDNLRK 76
           R++V GG G+ G      L  ++KN EV +VDN                      D + +
Sbjct: 13  RVMVIGGDGYCG--WATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 70
Query: 77  W--IGHPRFELIRHDVTEPLLI-------EVDQIYHL----ACPASPIFYKYNPVKTIKT 123
           W  +     EL   D+ +   +       E D + H     + P S I  +   V T   
Sbjct: 71  WKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMI-DRSRAVYTQHN 129
Query: 124 NVIGTLNMLGLAKRVGARILLTS--TSEVYGDP-------------------LVHPQDES 162
           NVIGTLN+L   K  G    L    T   YG P                   L +P+  S
Sbjct: 130 NVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQAS 189
Query: 163 YWGNVNPIG-----VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-- 215
            + +++ +        +C   G R  +    +    +G++     +      R++ D   
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATD---LNQGVVYGVKTDETEMHEELRNRLDYDAVF 246
Query: 216 GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRLMEGENTGPINIGN--PG 272
           G  ++ F  QA  G PLTV   G QTR +  + D V  + I +      G   + N    
Sbjct: 247 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTE 306
Query: 273 EFTMLELAENVKEVNFYLG 291
           +F++ ELA  V +    LG
Sbjct: 307 QFSVNELASLVTKAGSKLG 325

>pdb|3ST7|A Chain A, Crystal Structure Of Capsular Polysaccharide Assembling Protein Capf From Staphylococcus Aureus Length = 369

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 91/232 (39%), Gaps = 48/232 (20%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           I++TG  GF+G +L                      K +L     H  FE+ R    E L
Sbjct: 3   IVITGAKGFVGKNL----------------------KADLTSTTDHHIFEVHRQTKEEEL 40
Query: 95  ---LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151
              L++ D I HLA    P   K   +  + + +   L++L    +  A ILL+S+ +  
Sbjct: 41  ESALLKADFIVHLAGVNRPEHDKEFSLGNV-SYLDHVLDILTRNTKKPA-ILLSSSIQAT 98
Query: 152 GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM 211
            D              NP G      E K   E L+ +Y  ++G  + I R  N +G   
Sbjct: 99  QD--------------NPYG------ESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWC 138
Query: 212 NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
             +   V++ F  +  R E + V     +  +  YV D+V  + R +EG  T
Sbjct: 139 KPNYNSVIATFCYKIARNEEIQVNDRNVEL-TLNYVDDIVAEIKRAIEGTPT 189

>pdb|3SC6|A Chain A, 2.65 Angstrom Resolution Crystal Structure Of Dtdp-4-Dehydrorhamnose Reductase (Rfbd) From Bacillus Anthracis Str. Ames In Complex With Nadp Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 124 NVIGTLNMLGLAKRVGARILLTSTSEVY-GDPLVHPQDESYWGNVNPIGVRSCYDEGKRV 182
           N IG  N+   ++ VGA+++  ST  V+ GD    P+    + N  PI +   Y   K  
Sbjct: 83  NAIGARNVAVASQLVGAKLVYISTDYVFQGD---RPEGYDEFHNPAPINI---YGASKYA 136
Query: 183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR--GEPLTVQAPGTQ 240
            E  + + H ++ I +R + ++  YG           +NF+   IR   E   +     Q
Sbjct: 137 GEQFVKELHNKYFI-VRTSWLYGKYG-----------NNFVKTMIRLGKEREEISVVADQ 184
Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENV 283
             S  YV+D+   + +L+     G  ++ N G  +  E A+ +
Sbjct: 185 IGSPTYVADLNVMINKLIHTSLYGTYHVSNTGSCSWFEFAKKI 227

>pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 36  LVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSK-DNLRK--WIGHPRFELIRHDV 90
           L+TG  G  GS+L + L+E   E + +    + F   + D++ +     +P+F L   D+
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 64
Query: 91  TEP-----LLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM------LGLAKR 137
           ++      +L EV  D++Y+L   +       +P  T   + +GTL +      LGL K+
Sbjct: 65  SDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKK 124
Query: 138 VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
              R    STSE+YG     PQ E+      P   RS Y   K  A  +  +Y   +G+ 
Sbjct: 125 T--RFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGMY 177
Query: 198 IRIARIFNTYGPR 210
                +FN   PR
Sbjct: 178 ACNGILFNHESPR 190

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	297
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	1e-178
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	1e-159
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-151
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	1e-150
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	1e-136
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-122
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	2e-99
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-75
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	6e-73
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	2e-72
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	8e-70
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	1e-66
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	8e-65
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	6e-63
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-62
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-59
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	6e-59
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-56
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	3e-56
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	6e-55
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	6e-53
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	1e-52
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	9e-46
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	4e-44
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	3e-39
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	3e-36
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	5e-35
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	6e-32
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	2e-29
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	5e-28
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	5e-27
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	5e-26
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	7e-26
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	6e-21
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	2e-18
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	6e-18
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	4e-17
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	4e-17
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	2e-15
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-15
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	2e-15
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	3e-15
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	5e-15
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	9e-15
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	9e-14
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	9e-14
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	1e-13
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	2e-11
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	2e-10
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	4e-09
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	8e-09
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	5e-08
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	9e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	4e-06
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	4e-06
1xq6_A	253	Unknown protein; structural genomics, protein stru	5e-06
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	7e-06
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	9e-06
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	2e-05
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	3e-05
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	4e-05
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-05
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	4e-05
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	9e-05
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-04
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	2e-04
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	2e-04
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	4e-04
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	6e-04
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	8e-04

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score =  494 bits (1275), Expect = e-178
 Identities = 178/281 (63%), Positives = 217/281 (77%), Gaps = 4/281 (1%)

Query: 6   SNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65
           S+ +H+ +S            K      RIL+TGGAGF+GSHL DKLM  + +EV VVDN
Sbjct: 4   SHHHHHHSSGRENLYFQGHMEK---DRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDN 59

Query: 66  YFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNV 125
           +FTG K N+  WIGH  FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN 
Sbjct: 60  FFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNT 119

Query: 126 IGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET 185
           IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET
Sbjct: 120 IGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET 179

Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC 245
           + + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F 
Sbjct: 180 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQ 239

Query: 246 YVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           YVSD+V+GL+ LM    + P+N+GNP E T+LE A+ +K +
Sbjct: 240 YVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNL 280

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score =  446 bits (1149), Expect = e-159
 Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 23/273 (8%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
           MR+L+ G  GFIG+HL ++L+  +  EV  +D       D + +++ HP F  +  D++ 
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG----SDAISRFLNHPHFHFVEGDISI 56

Query: 92  -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
                E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  S
Sbjct: 57  HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116

Query: 147 TSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           TSEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R F
Sbjct: 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 176

Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
           N  GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++
Sbjct: 177 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 236

Query: 259 EGE----NTGPINIGNP-GEFTMLELAENVKEV 286
           E      +   INIGNP  E ++ EL E +   
Sbjct: 237 ENAGNRCDGEIINIGNPENEASIEELGEMLLAS 269

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score =  428 bits (1103), Expect = e-151
 Identities = 74/292 (25%), Positives = 125/292 (42%), Gaps = 15/292 (5%)

Query: 6   SNGNHNSASKPPPTPSPLRFSKFF-QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64
           + G  N       T   L   +++   N++I +TG  GFI SH+  +L   E + VI  D
Sbjct: 2   AMGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKH-EGHYVIASD 60

Query: 65  NYFTGSKDNLRKWIGHPRFELIRHDVTE---PLLIEVDQIYHLACPASPI-FYKYNPVKT 120
                  +++ + +    F L+   V E    +   VD +++LA     + F + N    
Sbjct: 61  ---WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVI 117

Query: 121 IKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGDPLVHPQDESY--WGNVNPIGVRSCYD 177
           +  N + + NM+  A+  G  R    S++ +Y +              +  P   +  + 
Sbjct: 118 MYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFG 177

Query: 178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQAIRGE-PLTV 234
             K   E L   Y++  GIE RI R  N YGP      GR    + F  +A        +
Sbjct: 178 LEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEM 237

Query: 235 QAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
              G QTRSF ++ + V+G++RL + +   P+NIG+    +M E+AE V   
Sbjct: 238 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSF 289

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score =  423 bits (1090), Expect = e-150
 Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 33/302 (10%)

Query: 6   SNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65
            + +H+  +    T  P           ++L+ G  GFIG HL  +++E   +  +   +
Sbjct: 3   HHHHHHMGTLEAQTQGPGSMKA-----KKVLILGVNGFIGHHLSKRILE-TTDWEVFGMD 56

Query: 66  YFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVK 119
             T    +L   + H R      D+T      E  + + D I  L   A+P  Y   P++
Sbjct: 57  MQTDRLGDL---VKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLR 113

Query: 120 TIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG---DPLVHPQDESY-WGNVNPIGVRSC 175
             + +    L ++  A + G  ++  STSEVYG   D    P   +  +G +N    R  
Sbjct: 114 VFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKP--RWI 171

Query: 176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRG 229
           Y   K++ + +++ Y    G+   + R FN  GP ++          RVV+ F+   +RG
Sbjct: 172 YACSKQLMDRVIWGYGM-EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRG 230

Query: 230 EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGP-INIGNP-GEFTMLELAENVK 284
           E +++   G+Q R+F YV D +  L++++E  N   TG   NIGNP   F++ ELA  + 
Sbjct: 231 ENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKML 290

Query: 285 EV 286
           E+
Sbjct: 291 EL 292

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  390 bits (1003), Expect = e-136
 Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 23/306 (7%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           M     + +H+S   P  +  P+  +    +N  ++V GGAGF+GS+LV +L+E   N+V
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYHLACPASPIFYKY 115
            VVDN  +  K N+     HP        +T+  L+     E D ++HLA         +
Sbjct: 61  HVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIH 117

Query: 116 NPVKTIKTNVIGTLNMLGLA---KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV 172
           +P+   + N + TL +       KR+   +   +   +        +       V+    
Sbjct: 118 DPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNN 177

Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR-----------VVSN 221
            S Y   K   E     YH+QH +    AR  N YGP   +  GR           V   
Sbjct: 178 DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPT 237

Query: 222 FIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME-GENTGPINIGNPGEFTMLELA 280
           FI +A++G PL ++  G  TR F +V D+ +GLI     G   G  NI +  E ++ +LA
Sbjct: 238 FIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLA 297

Query: 281 ENVKEV 286
             + E+
Sbjct: 298 TKINEI 303

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  351 bits (904), Expect = e-122
 Identities = 74/262 (28%), Positives = 113/262 (43%), Gaps = 19/262 (7%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR---KWIGHPRFELIR 87
              RIL+TGGAGFIG HL   L+     EV V+D+             K++  P  EL  
Sbjct: 6   LKHRILITGGAGFIGGHLARALVA-SGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEE 64

Query: 88  HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
            D+++     V  +YHLA   S       P+  +  NV    ++L L   VG  ++++ S
Sbjct: 65  RDLSD-----VRLVYHLASHKSVPRSFKQPLDYL-DNVDSGRHLLALCTSVGVPKVVVGS 118

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE-IRIARIFN 205
           T EVYG     P  E      +P+  RS Y   K   E +   + R      + I R FN
Sbjct: 119 TCEVYGQADTLPTPED-----SPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFN 173

Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP 265
            YGP        +V    A  +    L V+  G Q R F Y++D+VD L+ L        
Sbjct: 174 VYGPGE--RPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPSV 231

Query: 266 INIGNPGEFTMLELAENVKEVN 287
           +N G+    ++ ++   ++  +
Sbjct: 232 VNFGSGQSLSVNDVIRILQATS 253

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  293 bits (753), Expect = 2e-99
 Identities = 87/264 (32%), Positives = 125/264 (47%), Gaps = 24/264 (9%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MRI+VTGGAGFIGSHLVDKL+E    EV+VVDN  +G ++ +     +P  EL   D+ +
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVE-LGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKD 54

Query: 93  PLL---IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                 I+ D ++H A           P+     NV+ T N+L  A++ G   ++  S+S
Sbjct: 55  YSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSS 114

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
            VYGD  V P  E       P    S Y   K   E +   Y R  G+     R  N  G
Sbjct: 115 TVYGDADVIPTPEEE-----PYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVG 169

Query: 209 PRMNIDDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLME-----GEN 262
           PR+      V+ +FI +  R    L V   GTQ +S+ YV D V+  +   +        
Sbjct: 170 PRL---RHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAP 226

Query: 263 TGPINIGNPGEFTMLELAENVKEV 286
              +N+GN     +L++A+ V EV
Sbjct: 227 FLALNVGNVDAVRVLDIAQIVAEV 250

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  232 bits (593), Expect = 2e-75
 Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 28/262 (10%)

Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           +++I VTGG GF+G ++V+ +   + N  I++         N         +E    D T
Sbjct: 2   SLKIAVTGGTGFLGQYVVESIKN-DGNTPIILTRSIGNKAIND--------YEYRVSDYT 52

Query: 92  EPLLIE----VDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLT 145
              LI     VD + HLA             +     N I T N+         + I+  
Sbjct: 53  LEDLINQLNDVDAVVHLAATRGSQ-----GKISEFHDNEILTQNLYDACYENNISNIVYA 107

Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           ST   Y D    P +E       P      Y   K   E +   Y R+ G+ I+  R  +
Sbjct: 108 STISAYSDETSLPWNEKEL--PLPD---LMYGVSKLACEHIGNIYSRKKGLCIKNLRFAH 162

Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG- 264
            YG      +  +++ F  QA  GE LT+ A     R F Y  D    +I  ++ E    
Sbjct: 163 LYGFNE--KNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSG 220

Query: 265 PINIGNPGEFTMLELAENVKEV 286
             NIG+    T  E+A  +   
Sbjct: 221 TFNIGSGDALTNYEVANTINNA 242

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score =  235 bits (601), Expect = 6e-73
 Identities = 75/277 (27%), Positives = 131/277 (47%), Gaps = 23/277 (8%)

Query: 29  FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH 88
            +   R+L+ G  GFIG+HL ++L+  +  EV  +D       D + +++ HP F  +  
Sbjct: 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG----SDAISRFLNHPHFHFVEG 367

Query: 89  DVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 142
           D++      E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI
Sbjct: 368 DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRI 427

Query: 143 LLTSTSEVYGDPLVHPQDESYWGNV-NPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
           +  STSEVYG       DE +   +  P+   R  Y   K++ + +++ Y  + G++  +
Sbjct: 428 IFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487

Query: 201 ARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL 254
            R FN  GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547

Query: 255 IRLMEGEN---TGPI-NIGNPG-EFTMLELAENVKEV 286
            R++E       G I NIGNP  E ++ EL E +   
Sbjct: 548 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLAS 584

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  224 bits (574), Expect = 2e-72
 Identities = 80/261 (30%), Positives = 128/261 (49%), Gaps = 22/261 (8%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
             I+VTGGAGFIGSH+VDKL E+  NE++V+DN  +G+++ +     +    L++ D+  
Sbjct: 2   SLIVVTGGAGFIGSHVVDKLSES--NEIVVIDNLSSGNEEFV-----NEAARLVKADLAA 54

Query: 93  PLLIE----VDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
             + +     ++++H+A      I  + NP +  + NV+ T  +L   ++ G  RI+ TS
Sbjct: 55  DDIKDYLKGAEEVWHIAANPDVRIGAE-NPDEIYRNNVLATYRLLEAMRKAGVSRIVFTS 113

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
           TS VYG+  V P  E Y    +PI   S Y   K   E L+  Y     ++  I R  N 
Sbjct: 114 TSTVYGEAKVIPTPEDY--PTHPI---SLYGASKLACEALIESYCHTFDMQAWIYRFANV 168

Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME-GENTGP 265
            G R     G +    +      E L +   G Q +S+ Y+SD VD ++  +   E    
Sbjct: 169 IGRRS--THGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNI 226

Query: 266 INIGNPGEFTMLELAENVKEV 286
            NIG+  +  +  +AE V E 
Sbjct: 227 FNIGSEDQIKVKRIAEIVCEE 247

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  219 bits (559), Expect = 8e-70
 Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 23/295 (7%)

Query: 9   NHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT 68
           +H+  S    +       +        L+TG AGFIGS+L++ L++    +V+ +DN+ T
Sbjct: 4   HHHHGSMGMMSRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLK-LDQKVVGLDNFAT 62

Query: 69  GSKDNLRKW------IGHPRFELIRHDVTEPLLIE-----VDQIYHLACPASPIFYKYNP 117
           G + NL +            F+ I+ D+            VD + H A   S      +P
Sbjct: 63  GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDP 122

Query: 118 VKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY 176
           + +  TN+ G LNML  A+          ++S  YGD    P+ E   G   P+   S Y
Sbjct: 123 ITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIG--KPL---SPY 177

Query: 177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTV 234
              K V E     + R +G      R FN +G R + +     V+  + +  I+G+ + +
Sbjct: 178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYI 237

Query: 235 QAPGTQTRSFCYVSDMVDGLIRLMEGENTGP---INIGNPGEFTMLELAENVKEV 286
              G  +R FCY+ + V   +              NI   G  ++ +L   +++ 
Sbjct: 238 NGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDG 292

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  210 bits (536), Expect = 1e-66
 Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 32/264 (12%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
            ++ +TG  G IGSH+ + L+E   ++V+ +DN+ TG +++L+    HP    +   + +
Sbjct: 22  KKVFITGICGQIGSHIAELLLE-RGDKVVGIDNFATGRREHLK---DHPNLTFVEGSIAD 77

Query: 93  PLLIE-------VDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 143
             L+         D + H A     P     +      TN +G  N++  AK+    R +
Sbjct: 78  HALVNQLIGDLQPDAVVHTAASYKDP----DDWYNDTLTNCVGGSNVVQAAKKNNVGRFV 133

Query: 144 LTSTSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
              T+  YG  P+  P    +    NP    S Y   K   E     Y    G++    R
Sbjct: 134 YFQTALCYGVKPIQQPVRLDH--PRNPA--NSSYAISKSANED----YLEYSGLDFVTFR 185

Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN 262
           + N  GPR        +  F  +   G+   V       R F +V D+    +R ++G  
Sbjct: 186 LANVVGPRNVSG---PLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAVDGVG 239

Query: 263 TGPINIGNPGEFTMLELAENVKEV 286
            G  +  +  +  + EL + V E 
Sbjct: 240 HGAYHFSSGTDVAIKELYDAVVEA 263

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score =  207 bits (527), Expect = 8e-65
 Identities = 52/256 (20%), Positives = 93/256 (36%), Gaps = 45/256 (17%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M I++TG  GF+G +L   L     + +  V       ++ L   +              
Sbjct: 1   MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTK--EEELESALL------------- 45

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
               + D I HLA    P     +  +    NV    ++L +  R   +  +  +S +  
Sbjct: 46  ----KADFIVHLAGVNRPE----HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQA 97

Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
                          NP      Y E K   E L+ +Y  ++G  + I R  N +G    
Sbjct: 98  TQD------------NP------YGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCK 139

Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT---GPINIG 269
            +   V++ F  +  R E + V        +  YV D+V  + R +EG  T   G   + 
Sbjct: 140 PNYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVP 198

Query: 270 NPGEFTMLELAENVKE 285
           N  + T+ E+ + + +
Sbjct: 199 NVFKVTLGEIVDLLYK 214

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  201 bits (514), Expect = 6e-63
 Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 31/275 (11%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNL--------RKWIGHP 81
            N  IL+TGGAGF+GS+L     E + K +V+V+D + + +  +          K +   
Sbjct: 9   ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68

Query: 82  RFELIRHDVTEPLLIE------VDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
           + E+I  D+  PL +        D ++H  A   + +    N    +KTN    LN+L +
Sbjct: 69  KGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTM---LNQELVMKTNYQAFLNLLEI 125

Query: 135 AKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
           A+   A+++  S++ VYG+    P       N +P    + Y   K   +  +  +   +
Sbjct: 126 ARSKKAKVIYASSAGVYGNTKA-PNVVGK--NESPE---NVYGFSKLCMDEFVLSHS--N 177

Query: 195 GIEIRIARIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
                  R FN YGPR      +   +V      A+  + + +   G Q R F Y+ D++
Sbjct: 178 DNVQVGLRYFNVYGPREF-YKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236

Query: 252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
              ++ M+ + +G  N+G     +  E+   +KE 
Sbjct: 237 QANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEH 271

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score =  200 bits (510), Expect = 2e-62
 Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 29/277 (10%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW------IGHPRF 83
            S    L+TG AGFIGS+L++KL++     VI +DN+ TG + NL +           RF
Sbjct: 23  FSPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRF 81

Query: 84  ELIRHDVTEPLLIE-----VDQIYHLACPASPIFYKY---NPVKTIKTNVIGTLNMLGLA 135
             I  D+ +    E     VD + H A   S         +P+ T  TN+ G LN+L  A
Sbjct: 82  CFIEGDIRDLTTCEQVMKGVDHVLHQAALGS---VPRSIVDPITTNATNITGFLNILHAA 138

Query: 136 KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
           K          ++S  YGD    P+ E   GN  P+   S Y   K V E     Y R +
Sbjct: 139 KNAQVQSFTYAASSSTYGDHPALPKVEENIGN--PL---SPYAVTKYVNEIYAQVYARTY 193

Query: 195 GIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD 252
           G +    R FN +G R + +     V+  + A  ++G+ + +   G  +R FCY+ +++ 
Sbjct: 194 GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ 253

Query: 253 GLIRLMEGENTGP---INIGNPGEFTMLELAENVKEV 286
             I     +++      N+      T+ EL+  + + 
Sbjct: 254 MNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDE 290

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  192 bits (490), Expect = 2e-59
 Identities = 58/266 (21%), Positives = 101/266 (37%), Gaps = 18/266 (6%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHD 89
               I+VTGGAGFIGS++V  L +    +++VVDN   G+K  NL     +    + + D
Sbjct: 45  EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKED 102

Query: 90  VTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL 144
               ++       V+ I+H    +S   +    +  +  N   +  +L          L 
Sbjct: 103 FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYM--MDNNYQYSKELLHYCLEREIPFLY 160

Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
            S++  YG       +        P+   + +   K + +  +     +   +I   R F
Sbjct: 161 ASSAATYGGRTSDFIESRE--YEKPL---NVFGYSKFLFDEYVRQILPEANSQIVGFRYF 215

Query: 205 NTYGPRMNIDD--GRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
           N YGPR         V  +   Q   GE P   +      R F YV D+ D  +  +E  
Sbjct: 216 NVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 275

Query: 262 NTGPINIGNPGEFTMLELAENVKEVN 287
            +G  N+G     +   +A+     +
Sbjct: 276 VSGIFNLGTGRAESFQAVADATLAYH 301

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  190 bits (484), Expect = 6e-59
 Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 20/263 (7%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEP 93
           I+VTGGAGFIGS++V  L +    +++VVDN   G+K  NL     +    + + D    
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD--LNIADYMDKEDFLIQ 59

Query: 94  LLIE-----VDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
           ++       V+ I+H  AC ++    +++    +  N   +  +L          L  S+
Sbjct: 60  IMAGEEFGDVEAIFHEGACSSTT---EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 116

Query: 148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
           +  YG       +        P+   + Y   K + +  +     +   +I   R FN Y
Sbjct: 117 AATYGGRTSDFIESR--EYEKPL---NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVY 171

Query: 208 GPRMNIDD--GRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
           GPR         V  +   Q   GE P   +      R F YV D+ D  +  +E   +G
Sbjct: 172 GPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSG 231

Query: 265 PINIGNPGEFTMLELAENVKEVN 287
             N+G     +   +A+     +
Sbjct: 232 IFNLGTGRAESFQAVADATLAYH 254

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  183 bits (466), Expect = 2e-56
 Identities = 61/268 (22%), Positives = 99/268 (36%), Gaps = 32/268 (11%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTG +G IG+ LV  L E    + ++  +                  + I  DV+   
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD---------TGGIKFITLDVSNRD 52

Query: 95  LIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
            I+       +D I+HLA   S    K +P    K N+ GT N+L  AK+    ++++ S
Sbjct: 53  EIDRAVEKYSIDAIFHLAGILSAKGEK-DPALAYKVNMNGTYNILEAAKQHRVEKVVIPS 111

Query: 147 TSEVYGDPL-VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           T  V+G     +           P   R+ +   K  AE L   Y+ + G+++R  R   
Sbjct: 112 TIGVFGPETPKNKVPSITI--TRP---RTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPG 166

Query: 206 TYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
               +     G           A++ E         +     Y+ D +  L+ L E +  
Sbjct: 167 IISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRD 226

Query: 264 G-----PINIGNPGEFTMLELAENVKEV 286
                   N+     FT  EL   +KE 
Sbjct: 227 KLVLRNGYNVTA-YTFTPSELYSKIKER 253

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  182 bits (465), Expect = 3e-56
 Identities = 74/274 (27%), Positives = 120/274 (43%), Gaps = 36/274 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MR+LVTGGAGFIGSH+V+ L+     EV V+DN  TG ++N+            R D+ +
Sbjct: 1   MRVLVTGGAGFIGSHIVEDLLA-RGLEVAVLDNLATGKRENV-----PKGVPFFRVDLRD 54

Query: 93  PLLIE-------VDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA- 140
              +E          + H A       S      +PV   + N++G LN+L   ++ G  
Sbjct: 55  KEGVERAFREFRPTHVSHQAAQASVKVSVE----DPVLDFEVNLLGGLNLLEACRQYGVE 110

Query: 141 RILLTSTSE-VYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
           +++  ST   +YG+ P     +E++     P    S Y   K   E  +  Y + +G++ 
Sbjct: 111 KLVFASTGGAIYGEVPEGERAEETW--PPRPK---SPYAASKAAFEHYLSVYGQSYGLKW 165

Query: 199 RIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEPLTV-----QAPGTQTRSFCYVSDMVD 252
              R  N YGPR +   +  VV+ F  + ++G P+T+            R + YV D+ +
Sbjct: 166 VSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE 225

Query: 253 GLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
                +     G  N+G     T  E+   V E 
Sbjct: 226 AHALALFSLE-GIYNVGTGEGHTTREVLMAVAEA 258

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score =  179 bits (457), Expect = 6e-55
 Identities = 52/268 (19%), Positives = 90/268 (33%), Gaps = 25/268 (9%)

Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           N +IL+ G  G IG+ L  KL +    E ++  +    + D +              +  
Sbjct: 2   NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNS------GPFEVVNAL 55

Query: 92  EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARIL 143
           +   IE       +  IY +A   S    + NP      N+    ++L LAK     +I 
Sbjct: 56  DFNQIEHLVEVHKITDIYLMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIF 114

Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
             S+  V+G                 +   + Y   K+  E     YH  +G+++R  R 
Sbjct: 115 WPSSIAVFGPTTPKENTP----QYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRY 170

Query: 204 FNTYGPRMNIDDGR--VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME-- 259
                       G      +   +AI  +               Y+ D +D  I +M+  
Sbjct: 171 PGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAP 230

Query: 260 GENTGPINIGNPG--EFTMLELAENVKE 285
            E     +  N     FT  E+A  +K+
Sbjct: 231 VEKIKIHSSYNLAAMSFTPTEIANEIKK 258

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score =  175 bits (445), Expect = 6e-53
 Identities = 66/269 (24%), Positives = 108/269 (40%), Gaps = 39/269 (14%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S+MRIL+TGGAG +GS+L++  +  + +E++V+DN+ TG ++ L          +I   V
Sbjct: 19  SHMRILITGGAGCLGSNLIEHWLP-QGHEILVIDNFATGKREVLPP---VAGLSVIEGSV 74

Query: 91  TEPLLIE-------VDQIYHLA----CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
           T+  L+E          + H A     P                NV G++N+   A + G
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAAT-------NVQGSINVAKAASKAG 127

Query: 140 A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
             R+L   T+  YG P   P          P    + Y   K   E     +     + +
Sbjct: 128 VKRLLNFQTALCYGRPATVPIPIDS-----PTAPFTSYGISKTAGE----AFLMMSDVPV 178

Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR-L 257
              R+ N  GPR+ I  G  +  F  +   G+           R F  +SD +      L
Sbjct: 179 VSLRLANVTGPRLAI--G-PIPTFYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSL 232

Query: 258 MEGENTGPINIGNPGEFTMLELAENVKEV 286
            EG  TG  N+      ++ E+ + V + 
Sbjct: 233 QEGRPTGVFNVSTGEGHSIKEVFDVVLDY 261

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score =  174 bits (443), Expect = 1e-52
 Identities = 55/282 (19%), Positives = 101/282 (35%), Gaps = 35/282 (12%)

Query: 29  FQSNMRILVTGGAGFIGSHLVDKLME------NEKNEVIVVDNYFTGSKDNLRKWIGHPR 82
           +   M I + G AG +G  L  +L++          +  ++D +   +            
Sbjct: 11  YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF-----SGA 65

Query: 83  FELIRHDVTEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
            +    D++ P   E       D I+HLA   S      +  K  + N+ GT  +    +
Sbjct: 66  VDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAEL-DFDKGYRINLDGTRYLFDAIR 124

Query: 137 RVGA------RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
                     R++ TS+  V+G PL +P  + +     P+   + Y   K + E L+ DY
Sbjct: 125 IANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFH--TTPL---TSYGTQKAICELLLSDY 179

Query: 191 HRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS 248
            R+   +    R+          +       SN + + + G+   +  P +         
Sbjct: 180 SRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPR 239

Query: 249 DMVDGLIRLME--GENTGPINIGN-PGE-FTMLELAENVKEV 286
             V  LI       E  GP    + PG   T+ E  E +++V
Sbjct: 240 SAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKV 281

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  154 bits (392), Expect = 9e-46
 Identities = 51/236 (21%), Positives = 82/236 (34%), Gaps = 42/236 (17%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           R+LVTG AG +GS +   L     +EV + D    G+ +           E++  D+ + 
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGT-LAHEVRLSDIVDLGAAEAH--------EEIVACDLADA 54

Query: 94  LLIE-----VDQIYHLACPASPIFYKYNPV-KTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
             +       D I HL   +        P    ++ N+IG  N+   A+ +G  RI+  S
Sbjct: 55  QAVHDLVKDCDGIIHLGGVSVE-----RPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109

Query: 147 TSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           ++   G  P     D        P    S Y   K   E L   Y+ +  IE    RI +
Sbjct: 110 SNHTIGYYPRTTRIDTEV--PRRPD---SLYGLSKCFGEDLASLYYHKFDIETLNIRIGS 164

Query: 206 TYGPRMN---------IDDGRVVSNFIAQAIRGEPL---TVQAPGTQTRSFCYVSD 249
            +    +         +DD       + +A     L    V      T S+     
Sbjct: 165 CFPKPKDARMMATWLSVDDFM---RLMKRAFVAPKLGCTVVYGASANTESWWDNDK 217

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score =  154 bits (390), Expect = 4e-44
 Identities = 67/323 (20%), Positives = 101/323 (31%), Gaps = 65/323 (20%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---------------- 73
               R++V GG G+ G      L +    EV +VDN      D+                
Sbjct: 9   HHGSRVMVIGGDGYCGWATALHLSKKN-YEVCIVDNLVRRLFDHQLGLESLTPIASIHDR 67

Query: 74  LRKW--IGHPRFELIRHDVTEPLLIE-------VDQIYHLACPASP-----IFYKYNPVK 119
           + +W  +     EL   D+ +   +         D + H            +  +   V 
Sbjct: 68  ISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFG--EQRSAPYSMIDRSRAVY 125

Query: 120 TIKTNVIGTLNMLGLAKR--VGARILLTSTSEVYGDPLVHPQDESY---------WGNVN 168
           T   NVIGTLN+L   K       ++   T   YG P +   +E Y              
Sbjct: 126 TQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGYITITHNGRTDTLPY 184

Query: 169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM---------------NI 213
           P    S Y   K      +    +  GI          YG +                + 
Sbjct: 185 PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA 244

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP----INIG 269
             G  ++ F  QA  G PLTV   G QTR +  + D V  +   +            N  
Sbjct: 245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQF 304

Query: 270 NPGEFTMLELAENVKEVNFYLGR 292
              +F++ ELA  V +    LG 
Sbjct: 305 T-EQFSVNELASLVTKAGSKLGL 326

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  137 bits (347), Expect = 3e-39
 Identities = 43/231 (18%), Positives = 76/231 (32%), Gaps = 36/231 (15%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  R+LVTG AG +G  + ++L      E++ + +               P  E ++ D+
Sbjct: 2   AMKRLLVTGAAGQLGRVMRERLA--PMAEILRLADLSPLDPA-------GPNEECVQCDL 52

Query: 91  TEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
            +      ++   D I HL   +          + ++ N+IG  N+   A+  G  RI+ 
Sbjct: 53  ADANAVNAMVAGCDGIVHLGGISVE----KPFEQILQGNIIGLYNLYEAARAHGQPRIVF 108

Query: 145 TSTSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
            S++   G  P              P      Y   K   E L   Y  + G E  + RI
Sbjct: 109 ASSNHTIGYYPQTERLGPDV-----PARPDGLYGVSKCFGENLARMYFDKFGQETALVRI 163

Query: 204 FNTYGPRMNI----------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF 244
            +      N           D   ++       + G P  V         +
Sbjct: 164 GSCTPEPNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCP-VVWGASANDAGW 213

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score =  131 bits (333), Expect = 3e-36
 Identities = 75/296 (25%), Positives = 116/296 (39%), Gaps = 53/296 (17%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN-YFTGSKDNLRKWIGHPRFELIRHDVT 91
            ++L+TGG GF+GS+L    +     ++IV DN    G+ DNL        FE +  D+ 
Sbjct: 2   AKLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIR 60

Query: 92  EPLLIE-------VDQIYHLACPA------SPIFYKYNPVKTIKTNVIGTLNMLGLAKR- 137
               +         D  +HLA         S I    NP    + NV GTLN+L   ++ 
Sbjct: 61  NKNDVTRLITKYMPDSCFHLA--GQVAMTTS-I---DNPCMDFEINVGGTLNLLEAVRQY 114

Query: 138 -VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG------------KRVAE 184
                I+ +ST++VYGD L   +          +   + YDE             K  A+
Sbjct: 115 NSNCNIIYSSTNKVYGD-LEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAAD 173

Query: 185 TLMFDYHRQHGIEIRIARIFNTYGPR-MNIDDGRVVSNFIAQAIR-----GEPLTVQAPG 238
             M DY R  G+   + R  + YG R     D   V  F  +A+       +P T+   G
Sbjct: 174 QYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG 233

Query: 239 TQTRSFCYVSDMVDGLIRLME------GENTGPINIG--NPGEFTMLELAENVKEV 286
            Q R   +  DM+      +       G      NIG       ++LEL + +++ 
Sbjct: 234 KQVRDVLHAEDMISLYFTALANVSKIRGNA---FNIGGTIVNSLSLLELFKLLEDY 286

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  128 bits (324), Expect = 5e-35
 Identities = 39/263 (14%), Positives = 87/263 (33%), Gaps = 23/263 (8%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           ++++  V G  G +G H    +     ++++++  +   S+    + + +   E    ++
Sbjct: 12  AHVKYAVLGATGLLGHHAARAIRA-AGHDLVLI--HRPSSQ---IQRLAYLEPECRVAEM 65

Query: 91  TEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
            +   +E     +D +   A             + + + +  T        +    RIL 
Sbjct: 66  LDHAGLERALRGLDGVIFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILY 123

Query: 145 TSTSEVYG-DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
             ++      P   P  E  + +  P G +S Y   K   +    +  R +G+ + I   
Sbjct: 124 VGSAYAMPRHPQGLPGHEGLFYDSLPSG-KSSYVLCKWALDEQAREQAR-NGLPVVIGIP 181

Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
               G     D G      I     GE   +       R+    ++   GL+  +E    
Sbjct: 182 GMVLGEL---DIGPTTGRVITAIGNGE---MTHYVAGQRNVIDAAEAGRGLLMALERGRI 235

Query: 264 GPINIGNPGEFTMLELAENVKEV 286
           G   +       M +L   + E+
Sbjct: 236 GERYLLTGHNLEMADLTRRIAEL 258

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score =  119 bits (302), Expect = 6e-32
 Identities = 82/273 (30%), Positives = 122/273 (44%), Gaps = 42/273 (15%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKN-----EVIVVDN--YFTGSKDNLRKWIGHPRFEL 85
           MR+LVTGGAGFIGSH V +L+          EVIV+D+  Y  G++ NL      PR   
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTY-AGNRANLAPVDADPRLRF 59

Query: 86  IRHDVT-----EPLLIEVDQIYHLAC----------PASPIFYKYNPVKTIKTNVIGTLN 130
           +  D+         L  VD I H A            +  +F         +TNV GT  
Sbjct: 60  VHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGAS--VF--------TETNVQGTQT 109

Query: 131 MLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD 189
           +L  A   G  R++  ST++VYG       D   W   +P+   S Y   K  ++ +   
Sbjct: 110 LLQCAVDAGVGRVVHVSTNQVYGS-----IDSGSWTESSPLEPNSPYAASKAGSDLVARA 164

Query: 190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD 249
           YHR +G+++RI R  N YGP  + +  +++  F+   + G  L +   G   R + +  D
Sbjct: 165 YHRTYGLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDD 222

Query: 250 MVDGLIRLMEGENTGPI-NIGNPGEFTMLELAE 281
              G+  ++ G   G I +IG   E T  EL  
Sbjct: 223 HCRGIALVLAGGRAGEIYHIGGGLELTNRELTG 255

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score =  112 bits (284), Expect = 2e-29
 Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 57/281 (20%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDN--YFTGSKDNLRKWIGHPRFELIR 87
            +M++LVTGG GFIGS+ +  ++E   + EVI +D   Y   +  NL+     PR+  ++
Sbjct: 2   HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGY-GSNPANLKDLEDDPRYTFVK 60

Query: 88  HDVT-----EPLLIEVDQIYHLAC----------PASPIFYKYNPVKTIKTNVIGTLNML 132
            DV      + L+ +VD + HLA           P   IF        + +NVIGT  +L
Sbjct: 61  GDVADYELVKELVRKVDGVVHLAAESHVDRSISSPE--IF--------LHSNVIGTYTLL 110

Query: 133 GLAKR--VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
              +R     R +  ST EVYGD +     +  +   + +   S Y   K  ++ L+  +
Sbjct: 111 ESIRRENPEVRFVHVSTDEVYGD-I----LKGSFTENDRLMPSSPYSATKAASDMLVLGW 165

Query: 191 HRQHGIEIRIARIFNTYG---------PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT 241
            R + +   I R  N YG         P+            I +A  G  + +   G   
Sbjct: 166 TRTYNLNASITRCTNNYGPYQFPEKLIPKT-----------IIRASLGLKIPIYGTGKNV 214

Query: 242 RSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAE 281
           R + YV D V  +  ++    +  I NI    E T LE+ +
Sbjct: 215 RDWLYVEDHVRAIELVLLKGESREIYNISAGEEKTNLEVVK 255

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score =  109 bits (275), Expect = 5e-28
 Identities = 76/284 (26%), Positives = 107/284 (37%), Gaps = 58/284 (20%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDN--YFTGSKDNLRKWIGHPRFELIRHD 89
             I+VTGGAGFIGS+ V  +  N  +  V V+D   Y  G+K NL   I   R EL+  D
Sbjct: 5   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY-AGNKANLEA-ILGDRVELVVGD 62

Query: 90  VT-----EPLLIEVDQIYHLAC----------PASPIFYKYNPVKTIKTNVIGTLNMLGL 134
           +      + L  + D I H A           P+   F        I TN IGT  +L  
Sbjct: 63  IADAELVDKLAAKADAIVHYAAESHNDNSLNDPS--PF--------IHTNFIGTYTLLEA 112

Query: 135 AKRVGARILLTSTSEVYGD-PLVHPQDESYWGNV------NPIGVRSCYDEGKRVAETLM 187
           A++   R    ST EVYGD PL         G              S Y   K  ++ ++
Sbjct: 113 ARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIV 172

Query: 188 FDYHRQHGIEIRIARIFNTYG---------PRMNIDDGRVVSNFIAQAIRGEPLTVQAPG 238
             + R  G++  I+   N YG         PR            I   + G    +   G
Sbjct: 173 KAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQ-----------ITNILAGIKPKLYGEG 221

Query: 239 TQTRSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAE 281
              R + + +D   G+  ++     G    IG  GE    E+ E
Sbjct: 222 KNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLE 265

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score =  107 bits (269), Expect = 5e-27
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 47/279 (16%)

Query: 27  KFFQSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDN--YFTGSKDNLRKWIGHPRF 83
            F  + M ILVTGGAGFIGS+ V  ++++ +  ++I  D   Y +G+ +N++    HP +
Sbjct: 19  YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTY-SGNLNNVKSIQDHPNY 77

Query: 84  ELIRHDVTEPLLIE-------VDQIYHLACPA------SPIFYKYNPVKTIKTNVIGTLN 130
             ++ ++    L+E       V  I + A  A      S I    NP+    TNVIGT+ 
Sbjct: 78  YFVKGEIQNGELLEHVIKERDVQVIVNFA--AESHVDRS-I---ENPIPFYDTNVIGTVT 131

Query: 131 MLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD 189
           +L L K+    +++  ST EVYG  L        +    P+   S Y   K  A+ +   
Sbjct: 132 LLELVKKYPHIKLVQVSTDEVYGS-L---GKTGRFTEETPLAPNSPYSSSKASADMIALA 187

Query: 190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNF--------IAQAIRGEPLTVQAPGTQT 241
           Y++ + + + + R  N YGP            +        +  A+ G+ L +   G   
Sbjct: 188 YYKTYQLPVIVTRCSNNYGPY----------QYPEKLIPLMVTNALEGKKLPLYGDGLNV 237

Query: 242 RSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLEL 279
           R + +V+D    +  ++     G + NIG   E T +E+
Sbjct: 238 RDWLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEV 276

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score =  104 bits (261), Expect = 5e-26
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 49/286 (17%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
             IL+ GGAG+IGSH V KL++ E   V+VVDN  TG +D +         +    D+  
Sbjct: 2   NSILICGGAGYIGSHAVKKLVD-EGLSVVVVDNLQTGHEDAI-----TEGAKFYNGDLRD 55

Query: 92  EPLLIEV------DQIYHLACPASPIFYKY------NPVKTIKTNVIGTLNMLGLAKRVG 139
           +  L +V      + + H A                 P++    NV G L +L +     
Sbjct: 56  KAFLRDVFTQENIEAVMHFAA------DSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK 109

Query: 140 A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
             + + +ST+  YG+  V    E            + Y E K   E ++  Y +   +  
Sbjct: 110 VDKFIFSSTAATYGEVDVDLITEET-----MTNPTNTYGETKLAIEKMLHWYSQASNLRY 164

Query: 199 RIARIFNTYG--PRMNI-DDGRVVSN---FIAQAIRG--EPLTV-----QAP-GTQTRSF 244
           +I R FN  G  P   I +D R  ++    + Q   G  E + +       P GT  R +
Sbjct: 165 KIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDY 224

Query: 245 CYVSDMVDG----LIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
            +V D+V      L  L  G  +   N+GN   F++ E+ + V+EV
Sbjct: 225 IHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREV 270

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361

 Score =  104 bits (261), Expect = 7e-26
 Identities = 78/307 (25%), Positives = 121/307 (39%), Gaps = 71/307 (23%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN--YFTGSKDNLRKWIGHPRFELIRHDV 90
           M+IL+TGGAGFIGS +V  +++N ++ V+ +D   Y  G+ ++L       R+     D+
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTY-AGNLESLSDISESNRYNFEHADI 59

Query: 91  TEPLLIE-------VDQIYHLAC----------PASPIFYKYNPVKTIKTNVIGTLNML- 132
            +   I         D + HLA           PA   F        I+TN++GT  +L 
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPA--AF--------IETNIVGTYALLE 109

Query: 133 ---------GLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVN------PIGVRSCYD 177
                    G  K+   R    ST EVYGD L HP +      +            S Y 
Sbjct: 110 VARKYWSALGEDKKNNFRFHHISTDEVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYS 168

Query: 178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR---------MNIDDGRVVSNFIAQAIR 228
             K  ++ L+  + R +G+   +    N YGP          +           I  A+ 
Sbjct: 169 ASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLV-----------ILNALE 217

Query: 229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKEVN 287
           G+PL +   G Q R + YV D    L  ++     G   NIG   E   L++   V  + 
Sbjct: 218 GKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDV---VFTIC 274

Query: 288 FYLGRLL 294
             L  ++
Sbjct: 275 DLLDEIV 281

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 90.8 bits (226), Expect = 6e-21
 Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 47/213 (22%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S+MR+LV GGAG+IGSH V  L+ +  + V++VD+       +            ++   
Sbjct: 1   SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD 60

Query: 91  TEPL--------LIEVDQIYHLACPA--SPIFYKYNPVKTI------------------- 121
                       L   D    +      + +F ++ P+  +                   
Sbjct: 61  GPKPPWADRYAALEVGD----VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKY 116

Query: 122 -KTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGDPLVH-------PQDESYWGNVNPIGV 172
              NV+G L +L         +I+ +S++ ++G+P +        P D +          
Sbjct: 117 YDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA-----KKSP 171

Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
            S Y E K +AE ++ D    +GI+    R FN
Sbjct: 172 ESPYGESKLIAERMIRDCAEAYGIKGICLRYFN 204

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 83.3 bits (207), Expect = 2e-18
 Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 33/194 (17%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRH 88
           +   ILVTGGAG+IGSH   +L+ +   +V++ DN     ++ +   + I          
Sbjct: 4   TKGTILVTGGAGYIGSHTAVELLAHG-YDVVIADNLVNSKREAIARIEKITGKTPAFHET 62

Query: 89  DVTEPLLIE-------VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
           DV++   +        +    H A         A PI Y  N       N+   L++L +
Sbjct: 63  DVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRN-------NLDSLLSLLRV 115

Query: 135 AKRVGARILLTSTS-EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
            +    + ++ S+S  VYG P   P DE++     P+   + Y + K +AE ++ D    
Sbjct: 116 MRERAVKRIVFSSSATVYGVPERSPIDETF-----PLSATNPYGQTKLMAEQILRDVEAA 170

Query: 194 HGIEIRIA--RIFN 205
                R+A  R FN
Sbjct: 171 DP-SWRVATLRYFN 183

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 79.8 bits (197), Expect = 6e-18
 Identities = 34/237 (14%), Positives = 76/237 (32%), Gaps = 39/237 (16%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
           +   +I++ G +GF+GS L+++ +     EV  V        + ++    +   ++ + D
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALN-RGFEVTAV----VRHPEKIKI--ENEHLKVKKAD 54

Query: 90  VTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 143
           V+       +    D +     P        N        +   L ++   K+ G  R L
Sbjct: 55  VSSLDEVCEVCKGADAVISAFNPGW------NNPDIYDETIKVYLTIIDGVKKAGVNRFL 108

Query: 144 LTST-SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           +      ++  P +   D             +     K + E  +    ++  I+     
Sbjct: 109 MVGGAGSLFIAPGLRLMDSGEV-------PENILPGVKALGEFYLNFLMKEKEIDWVFFS 161

Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
                 P  ++  G     +    +  + + V   G    S   V D    +I  +E
Sbjct: 162 ------PAADMRPGVRTGRYR---LGKDDMIVDIVG---NSHISVEDYAAAMIDELE 206

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 79.4 bits (197), Expect = 4e-17
 Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 34/193 (17%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDV 90
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L   + +G      +  D+
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDI 59

Query: 91  TEPLLIE-------VDQIYHLAC-------PASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
               L+        +D + H A           P+ Y  N       NV GTL ++   +
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-------NVNGTLRLISAMR 112

Query: 137 RVGARILLTSTSE-VYGDPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQH 194
               +  + S+S  VYGD    P  ES+     P G  +S Y + K + E ++ D  +  
Sbjct: 113 AANVKNFIFSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQ 167

Query: 195 GIEIRIA--RIFN 205
             +  IA  R FN
Sbjct: 168 P-DWSIALLRYFN 179

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 80.5 bits (199), Expect = 4e-17
 Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 36/198 (18%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRH 88
           ++  +LVTGGAG+IGSH V +L+EN   + +V DN    + D++   + +          
Sbjct: 10  TSKIVLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEV 68

Query: 89  DVTEPLLIE-------VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
           D+ +   +E       +D + H A           P+ Y Y        N++GT+ +L L
Sbjct: 69  DLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRY-Y------HNNILGTVVLLEL 121

Query: 135 AKRVGARILLTSTSE-VYGDPLVHPQ----DESYWGNVNPIGVRSCYDEGKRVAETLMFD 189
            ++      + S+S  VYGD    P      E       P+G  + Y   K   E ++ D
Sbjct: 122 MQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC-----PLGPTNPYGHTKYAIENILND 176

Query: 190 YHRQHGIEIRIA--RIFN 205
            +       + A  R FN
Sbjct: 177 LYNSDKKSWKFAILRYFN 194

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 40/190 (21%), Positives = 68/190 (35%), Gaps = 35/190 (18%)

Query: 34  RILVTGGAGFIGSHLVDKLME-----------NEKNEVIVVDNYFTGSKDNLRKWIGHP- 81
           R+ VTGG GF+GS ++  L+E           + + +  V           L    G   
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV---------SFLTNLPGASE 53

Query: 82  RFELIRHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
           +      D++ P      +     I+H A P              K  V G L +L    
Sbjct: 54  KLHFFNADLSNPDSFAAAIEGCVGIFHTASP-IDFAVSEPEEIVTKRTVDGALGILKACV 112

Query: 137 RVGA--RILLTST--SEVYGDPLVHPQDESYWGNVNPIGVR----SCYDEGKRVAETLMF 188
                 R + TS+  +  +        DES W +V+ +         Y   K +AE  + 
Sbjct: 113 NSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVL 172

Query: 189 DYHRQHGIEI 198
           ++  Q+GI++
Sbjct: 173 EFGEQNGIDV 182

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 74.6 bits (184), Expect = 2e-15
 Identities = 49/296 (16%), Positives = 92/296 (31%), Gaps = 58/296 (19%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-------TGSKDNLRKWIGHP-- 81
               +LVTG  GF+ SH+V++L+E+          Y             NL+K       
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEH---------GYKVRGTARSASKLANLQKRWDAKYP 60

Query: 82  -RFE-LIRHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
            RFE  +  D+ +      ++     + H+   AS + +     + +   + GTLN L  
Sbjct: 61  GRFETAVVEDMLKQGAYDEVIKGAAGVAHI---ASVVSFSNKYDEVVTPAIGGTLNALRA 117

Query: 135 AKRVGA--RILLT-STSEVYGDPLVHPQ---DESYWGNVNPIGVRSCYDEG--------- 179
           A    +  R +LT ST               DE  W   N   +                
Sbjct: 118 AAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSW---NLESIDKAKTLPESDPQKSLW 174

Query: 180 -----KRVAETLMFDYHRQHGIEIRIARIFN---TYGPRMNIDDGRVVSN-FIAQAIRGE 230
                K  AE   + +  ++     +  +     T G   + +     ++ ++     GE
Sbjct: 175 VYAASKTEAELAAWKFMDENKPHFTLNAV-LPNYTIGTIFDPETQSGSTSGWMMSLFNGE 233

Query: 231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT-GPINIGNPGEFTMLELAENVKE 285
                A     + +    D+    +  +           G  G F    +    ++
Sbjct: 234 VSPALAL-MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRK 288

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 74.5 bits (183), Expect = 2e-15
 Identities = 55/293 (18%), Positives = 108/293 (36%), Gaps = 44/293 (15%)

Query: 25  FSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-------DNYFTGSKDNLRKW 77
            + F+Q   R+ VTG  GF G  L   L +     V           + F  +   +   
Sbjct: 3   NNSFWQ-GKRVFVTGHTGFKGGWLSLWL-QTMGATVKGYSLTAPTVPSLFETA--RVADG 58

Query: 78  IGHPRFELIRHDVTEPLLIEV--DQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNML 132
           +     ++   +     + E   + ++H+A  A P+    Y   PV+T  TNV+GT+ +L
Sbjct: 59  MQSEIGDIRDQNKLLESIREFQPEIVFHMA--AQPLVRLSYS-EPVETYSTNVMGTVYLL 115

Query: 133 GLAKRVG--ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
              + VG    ++  ++ + Y     + +    +     +G    Y   K  AE +   Y
Sbjct: 116 EAIRHVGGVKAVVNITSDKCYD----NKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSY 171

Query: 191 ---------HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT 241
                    + QHG  +   R  N  G   +    R+V + +    + +P+ ++ P    
Sbjct: 172 RNSFFNPANYGQHGTAVATVRAGNVIGGG-DWALDRIVPDILRAFEQSQPVIIRNP-HAI 229

Query: 242 RSFCYVSDMVDGLIRLME------GENTGPINIGNPGE--FTMLELAENVKEV 286
           R + +V + + G + L +       E     N G        +  + E + + 
Sbjct: 230 RPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKY 282

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 74.6 bits (183), Expect = 3e-15
 Identities = 54/337 (16%), Positives = 102/337 (30%), Gaps = 81/337 (24%)

Query: 10  HNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENE--KNEVI------ 61
             + + P P+P              +L+TG  GF+G +LV +L+        +I      
Sbjct: 61  ATAVNLPGPSPEL----------RTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAE 110

Query: 62  --------VVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEP-----------LLIEVDQ 100
                   +   + +G  + LR +  +   R E++  D +EP           L   VD 
Sbjct: 111 SDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDL 170

Query: 101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYG------- 152
           I   A  A    + Y   +    NV GT  ++ +A           ST++V         
Sbjct: 171 IVDSA--AMVNAFPY--HELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAF 226

Query: 153 ---DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
                +               G    Y   K   E L+ + +    + + + R       
Sbjct: 227 TEDADIRVISPTRTVDGGWAGG----YGTSKWAGEVLLREANDLCALPVAVFRCGMILAD 282

Query: 210 R-----MNIDDGRVVSNFI--AQAIRGEPLTVQAPGTQTRSFCYVSDM--VDGLIRLM-- 258
                 +N+ D   V+  +    A    P +   P ++        D   V  +   +  
Sbjct: 283 TSYAGQLNMSDW--VTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAV 340

Query: 259 -------EGENTGPI-NIGNPGE--FTMLELAENVKE 285
                           ++ NP +    + E  + + E
Sbjct: 341 LGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIE 377

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 73.4 bits (181), Expect = 5e-15
 Identities = 54/284 (19%), Positives = 102/284 (35%), Gaps = 45/284 (15%)

Query: 34  RILVTGGAGFIGSHLVDKLME----------NEKNEVIVVDNYFTGSKDNLRKWIGHPRF 83
              V GG GF+ S LV  L++          +  N+  V          +L +       
Sbjct: 11  TACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKV---------SHLLELQELGDL 61

Query: 84  ELIRHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
           ++ R D+T+       +   D ++H+A P      +      IK  + G +N++    R 
Sbjct: 62  KIFRADLTDELSFEAPIAGCDFVFHVATPV-HFASEDPENDMIKPAIQGVVNVMKACTRA 120

Query: 139 GA--RILLT-STSEVYGDPLVHPQ---DESYWGNVNPIGVRSC----YDEGKRVAETLMF 188
            +  R++LT S + V  + L       DE  W ++  +         Y   K +AE   +
Sbjct: 121 KSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAW 180

Query: 189 DYHRQHGIE---IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC 245
            +  ++ I+   +    +    G  +  D    +   ++     E L     G Q  S  
Sbjct: 181 KFAEENNIDLITVIPTLMA---GSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGS 237

Query: 246 Y----VSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKE 285
                V D+    I + E E+     I      ++ ELA+ + +
Sbjct: 238 VSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSK 281

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 72.8 bits (178), Expect = 9e-15
 Identities = 40/280 (14%), Positives = 77/280 (27%), Gaps = 50/280 (17%)

Query: 36  LVTGGAGFIGSHLVDKL----MENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           L+ G  G IG+ L + L          +V  V      ++     W        ++ D++
Sbjct: 5   LIVGVTGIIGNSLAEILPLADTPGGPWKVYGV------ARRTRPAWHEDNPINYVQCDIS 58

Query: 92  EP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RIL 143
           +P      L  +  + H+         +    +  + N     N+L            I 
Sbjct: 59  DPDDSQAKLSPLTDVTHVFYVTWAN--RSTEQENCEANSKMFRNVLDAVIPNCPNLKHIS 116

Query: 144 LTSTSEVYGDPLVH---------PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
           L +  + Y  P            P  E              YD      + ++ +  ++ 
Sbjct: 117 LQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYM---NFYYDL----EDIMLEEVEKKE 169

Query: 195 GIEIRIARIFNTYGPR----MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT-----RSFC 245
           G+   + R  N +G      MN+     V   I     G+ L     G +          
Sbjct: 170 GLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAI-CKHEGKVLRF--TGCKAAWDGYSDCS 226

Query: 246 YVSDMVDGLIRLMEGENT--GPINIGNPGEFTMLELAENV 283
               + +  I             N+ N   F      + +
Sbjct: 227 DADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVL 266

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 69.6 bits (171), Expect = 9e-14
 Identities = 54/283 (19%), Positives = 102/283 (36%), Gaps = 45/283 (15%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLME----------NEKNEVIVVDNY-FTGSKDNLRKWIG 79
            +  + VTG +GFIGS LV +L+E          +  N   V        ++ +L     
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHL----- 58

Query: 80  HPRFELIRHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVK-TIKTNVIGTLNMLG 133
                L + D+ +       +     ++H+A P    F   +P    IK  + G L ++ 
Sbjct: 59  ----TLWKADLADEGSFDEAIKGCTGVFHVATPM--DFESKDPENEVIKPTIEGMLGIMK 112

Query: 134 LAKRVGA--RILLTST--SEVYGDPLVHPQDESYWGNVNPIGVRSC----YDEGKRVAET 185
                    R++ TS+  +    +  +   DES W ++     +      Y   K +AE 
Sbjct: 113 SCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQ 172

Query: 186 LMFDYHRQHGIE---IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR 242
             + Y +++ I+   I    +    GP +               I G             
Sbjct: 173 AAWKYAKENNIDFITIIPTLVV---GPFIM-SSMPPSLITALSPITGNEAHYSIIR--QG 226

Query: 243 SFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKE 285
            F ++ D+ +  I L E        I +  +  +L+LA+ ++E
Sbjct: 227 QFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLRE 269

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 69.5 bits (171), Expect = 9e-14
 Identities = 58/197 (29%), Positives = 83/197 (42%), Gaps = 36/197 (18%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRH 88
             +MR L+TG AGF+G +L + L   E+N EV        G+          P  E+I  
Sbjct: 10  HGSMRALITGVAGFVGKYLANHLT--EQNVEVF-------GTS--RNNEAKLPNVEMISL 58

Query: 89  DVTEP-----LLIEV--DQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 137
           D+ +      ++ ++  D I+HLA       S  +   N   T  TNV GTL++L   + 
Sbjct: 59  DIMDSQRVKKVISDIKPDYIFHLAAKSSVKDS--W--LNKKGTFSTNVFGTLHVLDAVRD 114

Query: 138 VG--ARILLTSTSEVYGDPLVH--PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
                RIL   +SE YG  L    P  E      N +   S Y   K     L   Y + 
Sbjct: 115 SNLDCRILTIGSSEEYGMILPEESPVSEE-----NQLRPMSPYGVSKASVGMLARQYVKA 169

Query: 194 HGIEIRIARIFNTYGPR 210
           +G++I   R FN  GP 
Sbjct: 170 YGMDIIHTRTFNHIGPG 186

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 69.5 bits (171), Expect = 1e-13
 Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 42/201 (20%)

Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-----FTGSK----DNLRKWIGHPR 82
             ++LVTGGAG+IGSH V +L+E      +V+DN+       GS       +++  G   
Sbjct: 2   AEKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQELTGR-S 59

Query: 83  FELIRHDVTEPLLIE-------VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGT 128
            E    D+ +   ++          + H A           P+ Y          N+ GT
Sbjct: 60  VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRV-------NLTGT 112

Query: 129 LNMLGLAKRVGARILLTSTSE-VYGDPLVHPQDESYWGNVNPIGVRSC-YDEGKRVAETL 186
           + +L + K  G + L+ S+S  VYG+P   P DE++     P G  +  Y + K   E +
Sbjct: 113 IQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEM 167

Query: 187 MFDYHRQHGIEIRIA--RIFN 205
           + D  +           R FN
Sbjct: 168 IRDLCQADK-TWNAVLLRYFN 187

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 53/274 (19%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-----NLRKWIGHPRFEL 85
            N  IL+TGG G  G   V K+++    + I+V   +  S+D      +      PR   
Sbjct: 20  DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIV---Y--SRDELKQSEMAMEFNDPRMRF 74

Query: 86  IRHDV-----TEPLLIEVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
              DV         L  VD   H A     P +    +YNP++ IKTN++G  N++    
Sbjct: 75  FIGDVRDLERLNYALEGVDICIHAAALKHVPIA----EYNPLECIKTNIMGASNVINACL 130

Query: 137 RVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD---YHR 192
           +   ++++  ST     D   +P        +N  G        K  ++ L      +  
Sbjct: 131 KNAISQVIALST-----DKAANP--------INLYGA------TKLCSDKLFVSANNFKG 171

Query: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR-GEPLTVQAPGTQTRSFCYVSDMV 251
               +  + R  N  G R     G VV  F          + +      TR +  + + V
Sbjct: 172 SSQTQFSVVRYGNVVGSR-----GSVVPFFKKLVQNKASEIPITDI-RMTRFWITLDEGV 225

Query: 252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKE 285
             +++ ++  + G I +       M +LA+ +  
Sbjct: 226 SFVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAP 259

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 17/121 (14%)

Query: 190 YHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFI-----AQAIRGEPLTVQAPGTQTR 242
           Y+RQ+G + R     N YGP  N    +  V+   +     A A +   + V   GT  R
Sbjct: 150 YNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMR 209

Query: 243 SFCYVSDMVDGLIRLME----------GENTGPINIGNPGEFTMLELAENVKEVNFYLGR 292
            F +V DM    I +ME                IN+G   + T+ ELA+ + +V  Y GR
Sbjct: 210 EFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR 269

Query: 293 L 293
           +
Sbjct: 270 V 270

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 53.8 bits (129), Expect = 8e-09
 Identities = 27/229 (11%), Positives = 69/229 (30%), Gaps = 32/229 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M+I + G  G  GS ++++      +EV         +   +     H    +++ D+ +
Sbjct: 1   MKIGIIGATGRAGSRILEEAKN-RGHEVTA----IVRNAGKIT--QTHKDINILQKDIFD 53

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILLTSTSEV 150
             L ++     +                 + +V    +++ +     +   +++   + +
Sbjct: 54  LTLSDLSDQNVVVDAYGI------SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASL 107

Query: 151 YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR 210
             D   +   ES      P      Y   +  A+ L      Q             + P 
Sbjct: 108 QIDEDGNTLLESKGLREAPY-----YPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG 162

Query: 211 MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
               D ++  + +              G+   SF  + D    ++  +E
Sbjct: 163 ERTGDYQIGKDHL------------LFGSDGNSFISMEDYAIAVLDEIE 199

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 51.6 bits (124), Expect = 5e-08
 Identities = 21/121 (17%), Positives = 50/121 (41%), Gaps = 13/121 (10%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
             MR+LV G  G +  +L+ +L   + +E +        +++   +       +++  ++
Sbjct: 20  QGMRVLVVGANGKVARYLLSELKN-KGHEPVA----MVRNEEQGPELRERGASDIVVANL 74

Query: 91  TEPL---LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
            E        +D +   A  + P        KTI  ++ G +  +  A++ G  R ++ S
Sbjct: 75  EEDFSHAFASIDAVVFAAG-SGP---HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVS 130

Query: 147 T 147
           +
Sbjct: 131 S 131

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 51.2 bits (123), Expect = 9e-08
 Identities = 43/254 (16%), Positives = 77/254 (30%), Gaps = 37/254 (14%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
            +IL+ G  G +G  L  +L   + +EV  +      S   +   +     ++ R D   
Sbjct: 4   SKILIAG-CGDLGLELARRLTA-QGHEVTGL----RRSAQPMPAGVQTLIADVTRPDTLA 57

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY 151
            ++    +I      AS    +Y+      + V G  N L   +      +   S++ VY
Sbjct: 58  SIVHLRPEILVYCVAAS----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVY 113

Query: 152 GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM 211
           G  +    DE                +    AE L+            I R    YGP  
Sbjct: 114 GQEVEEWLDEDTP--PIAKDFSG---KRMLEAEALL------AAYSSTILRFSGIYGP-- 160

Query: 212 NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP----IN 267
               GR     I Q     P    A      +  +  D    +  L++  +         
Sbjct: 161 ----GR--LRMIRQ--AQTPEQWPARN-AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYI 211

Query: 268 IGNPGEFTMLELAE 281
           + +     + +L  
Sbjct: 212 VTDNQPLPVHDLLR 225

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 2e-07
 Identities = 46/344 (13%), Positives = 99/344 (28%), Gaps = 104/344 (30%)

Query: 27  KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----LRKWIGHPR 82
             F  + +IL+T         + D L       + +  +  T + D     L K++    
Sbjct: 260 NAFNLSCKILLTTR----FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315

Query: 83  FELIRHDV--TEPLLI----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
            +L   +V  T P  +    E  +       A+   +K+     + T +  +LN+L  A 
Sbjct: 316 QDL-PREVLTTNPRRLSIIAESIRDG----LATWDNWKHVNCDKLTTIIESSLNVLEPA- 369

Query: 137 RVGARILLTSTSEVYGDPLVHPQD--------ESYWGNVNPIGVRSCYDE--GKRVAE-- 184
                       +++    V P             W +V    V    ++     + E  
Sbjct: 370 ---------EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420

Query: 185 ---------TLMFDYHRQ-------HGIEI---RIARIFNTYGPRMNIDDGRVVS----- 220
                    ++  +   +       H   +    I + F++        D    S     
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480

Query: 221 --------------------NFIAQAIRGEPLTVQAPGTQTRSFC-------YVSD---- 249
                                F+ Q IR +     A G+   +         Y+ D    
Sbjct: 481 LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPK 540

Query: 250 ---MVDGLIRLMEGENTGPINIGNPGEFT-MLELAENVKEVNFY 289
              +V+ ++  +       I      ++T +L +A   ++   +
Sbjct: 541 YERLVNAILDFLPKIEENLIC----SKYTDLLRIALMAEDEAIF 580

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 12/83 (14%)

Query: 24  RFSKFFQSN-MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPR 82
           R S  F  + + + +TG  G +G  L  +L     +EVI +       +    K    P 
Sbjct: 138 RTSTLFDGSPLTVAITGSRGLVGRALTAQLQT-GGHEVIQL----VRKEPKPGKRFWDPL 192

Query: 83  FELIRHDVTEPLLIEVDQIYHLA 105
                      LL   D + HLA
Sbjct: 193 NPASD------LLDGADVLVHLA 209

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 45.8 bits (108), Expect = 4e-06
 Identities = 33/229 (14%), Positives = 61/229 (26%), Gaps = 30/229 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           M+I V G  G  GS +V +      +EV+ VV +     K   R              +T
Sbjct: 1   MKIAVLGATGRAGSAIVAEARR-RGHEVLAVVRD---PQKAADRLGATVATLVKEPLVLT 56

Query: 92  EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150
           E  L  VD +             Y        ++    +++ L +      + +  ++ +
Sbjct: 57  EADLDSVDAVVDALSVPWGSGRGY-------LHLDFATHLVSLLRNSDTLAVFILGSASL 109

Query: 151 YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR 210
                 HP    +  +            G                +            P 
Sbjct: 110 AMPGADHPMILDFPESAASQPWYD----GALYQYYEYQFLQMNANVNWIGIS------PS 159

Query: 211 MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
                G   S         + L V   G   +S     +M   ++  +E
Sbjct: 160 EAFPSGPATSYVAG----KDTLLVGEDG---QSHITTGNMALAILDQLE 201

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 24/136 (17%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +   +LVTG +G  G  +  KL E     V         S     K       ++   D+
Sbjct: 3   NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKG---LVRSAQGKEKI--GGEADVFIGDI 57

Query: 91  TEPLLIE-----VDQIYHLA-------------CPASPIFYKYNPVKTIKTNVIGTLNML 132
           T+   I      +D +  L                  P F   +     + + IG  N +
Sbjct: 58  TDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQI 117

Query: 133 GLAKRVG-ARILLTST 147
             AK  G   I++  +
Sbjct: 118 DAAKVAGVKHIVVVGS 133

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 43.6 bits (103), Expect = 7e-06
 Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 6/61 (9%)

Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
            I V G AG IG  +   L  +    V V D+        L   +        + D  +
Sbjct: 6  WNICVVG-AGKIGQMIAALLKTSSNYSVTVADH----DLAALAV-LNRMGVATKQVDAKD 59

Query: 93 P 93
           
Sbjct: 60 E 60

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 44.8 bits (106), Expect = 9e-06
 Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 42/225 (18%)

Query: 12  SASKPPPTPSPLRFSKFFQSNM-RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS 70
            +S      S  R + +FQ +M  +L+ G  G I  H++++L + +  +  +    F   
Sbjct: 2   GSSHHHHHHSSGRENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTL----FARQ 57

Query: 71  KDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNV 125
              + K       ++I  DV         +   D +Y                 T +   
Sbjct: 58  PAKIHK-PYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL--------------TGEDLD 102

Query: 126 IGTLNMLGLAKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE 184
           I   +++   K     R++   +  +Y +    P     W N           +  R A 
Sbjct: 103 IQANSVIAAMKACDVKRLIFVLSLGIYDEV---PGKFVEWNNAVIGE----PLKPFRRAA 155

Query: 185 TLMFDYHRQHGIE---IRIARIFN--TYGPRMNIDDGRVVSNFIA 224
               D     G+E   +R A + +       +   +       ++
Sbjct: 156 ----DAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVS 196

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 53/285 (18%), Positives = 88/285 (30%), Gaps = 83/285 (29%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MR L+TG +G +G  L   L  +E++EVI V                   ++L   D+T+
Sbjct: 1   MRTLITGASGQLGIELSRLL--SERHEVIKVY----------NSSEIQGGYKL---DLTD 45

Query: 93  PLLIE-------VDQIYHLACPASPIFYKY--------NPVKTIKTNVIGTLNMLGLAKR 137
              +E        D I + A  A                  K  K N     +++   K 
Sbjct: 46  FPRLEDFIIKKRPDVIINAA--A------MTDVDKCEIEKEKAYKINAEAVRHIVRAGKV 97

Query: 138 VGARILLTSTSEVY---GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
           + + I+  ST  V+          +D       NPI     Y   K + ET         
Sbjct: 98  IDSYIVHISTDYVFDGEKGNYK-EEDI-----PNPINY---YGLSKLLGETFALQDD--S 146

Query: 195 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR----GEPLTV--QAPGTQTRSFCYVS 248
            I IR + I   +  +           F     +    G+ +        +         
Sbjct: 147 LI-IRTSGI---FRNK----------GFPIYVYKTLKEGKTVFAFKGY-YSPI----SAR 187

Query: 249 DMVDGLIRLMEGENTGPINIGNPG----EFTM--LELAENVKEVN 287
            +   ++ L+E   TG I++        E  +   E      EV 
Sbjct: 188 KLASAILELLELRKTGIIHVAGERISRFELALKIKEKFNLPGEVK 232

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 43.5 bits (102), Expect = 3e-05
 Identities = 25/174 (14%), Positives = 47/174 (27%), Gaps = 32/174 (18%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
            I + G AG I   L   L+      + +             + I H R  +I      P
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGR--QLKTRIPPEIIDHERVTVIEGSFQNP 64

Query: 94  LLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148
             +E      + ++                     +     +++    R   R ++  + 
Sbjct: 65  GXLEQAVTNAEVVFV----------------GAMESGSDMASIVKALSRXNIRRVIGVSM 108

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
                    P     W   N       Y +G+R A     +  R+  +   I R
Sbjct: 109 AGLSGEF--PVALEKWTFDNLPIS---YVQGERQAR----NVLRESNLNYTILR 153

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 40/261 (15%), Positives = 77/261 (29%), Gaps = 65/261 (24%)

Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           N R+LVTG  G +G  +  +  +N  + V           + +              ++ 
Sbjct: 2   NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQV--------------NLL 47

Query: 92  EPLLIE-------VDQIYHLACPASPIFYKY--------NPVKTIKTNVIGTLNMLGLAK 136
           +   +           I H  C A                P    + NV  + N+   A 
Sbjct: 48  DSNAVHHIIHDFQPHVIVH--CAA------ERRPDVVENQPDAASQLNVDASGNLAKEAA 99

Query: 137 RVGARILLTSTSEVY---GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
            VGA ++  S+  V+     P    +D        P+ +   Y + K   E  + + +  
Sbjct: 100 AVGAFLIYISSDYVFDGTNPPYR-EEDI-----PAPLNL---YGKTKLDGEKAVLENNLG 150

Query: 194 HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR-----GEPLTVQAPGTQTRSFCYVS 248
             + +RI  ++                + +           +   +     Q R   +V 
Sbjct: 151 AAV-LRIPILYGEVEKLEE--------SAVTVMFDKVQFSNKSANMDH--WQQRFPTHVK 199

Query: 249 DMVDGLIRLMEGENTGPINIG 269
           D+     +L E     P   G
Sbjct: 200 DVATVCRQLAEKRMLDPSIKG 220

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 23/122 (18%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
           M+I + G  G +G  L+  L   +                 + +   +   + +  DV  
Sbjct: 1   MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGA--------RKVEQVPQYNNVKAVHFDVDW 52

Query: 92  -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLT 145
                   L  +D I +++               +K ++ G + ++  A++    R +L 
Sbjct: 53  TPEEMAKQLHGMDAIINVSGSG--------GKSLLKVDLYGAVKLMQAAEKAEVKRFILL 104

Query: 146 ST 147
           ST
Sbjct: 105 ST 106

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467

 Score = 43.7 bits (102), Expect = 4e-05
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 31 SNM--RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH 88
           +M   +L+  G+GF+   ++D L  N+   V V       +  N +        + I  
Sbjct: 20 RHMGKNVLL-LGSGFVAQPVIDTLAANDDINVTVACR----TLANAQALAKPSGSKAISL 74

Query: 89 DVTEP 93
          DVT+ 
Sbjct: 75 DVTDD 79

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 19/132 (14%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
            +I + G  G  G   + + ++    EV V           L    G     ++  DV +
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQ-AGYEVTV----LVRDSSRLPS-EGPRPAHVVVGDVLQ 57

Query: 93  P-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
                  +   D +  L           N +        G  N++   K  G  +++  +
Sbjct: 58  AADVDKTVAGQDAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKAHGVDKVVACT 110

Query: 147 TSEVYGDPLVHP 158
           ++ +  DP   P
Sbjct: 111 SAFLLWDPTKVP 122

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 7/44 (15%), Positives = 16/44 (36%)

Query: 20 PSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV 63
                  F   N  + + G +G  G  L+ +++E      + +
Sbjct: 6  ALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTL 49

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 43/250 (17%), Positives = 77/250 (30%), Gaps = 36/250 (14%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
             +L  G  G+    L   L   +   +I      + + D +   I     E +     E
Sbjct: 6   GTLLSFG-HGYTARVLSRALAP-QGWRIIGT----SRNPDQMEA-IRASGAEPLLWPGEE 58

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
           P L  V    HL    +P       +  +        + +         +   ST+ VYG
Sbjct: 59  PSLDGVT---HLLISTAPDSGGDPVLAALG-------DQIAARAAQFRWVGYLSTTAVYG 108

Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
           D      DE+    + P   R       R        +     + + + R+   YGP   
Sbjct: 109 DHDGAWVDETTP--LTPTAARG------RWRVMAEQQWQAVPNLPLHVFRLAGIYGP--- 157

Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI-NIGNP 271
              GR      ++  +G    +  P  Q  S  +V D+   L   M   + G + N+ + 
Sbjct: 158 ---GR---GPFSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDD 210

Query: 272 GEFTMLELAE 281
                 ++  
Sbjct: 211 EPVPPQDVIA 220

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 17/96 (17%)

Query: 80  HPRFELIRHDVTEP-----LLIEV--DQIYHLAC----PASPIFYKYNPVKTIKTNVIGT 128
               +    D+ +       +I+    ++Y+LA      AS  +    PV T   + +G 
Sbjct: 62  EGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGAS--WN--QPVTTGVVDGLGV 117

Query: 129 LNMLGLAKRVG--ARILLTSTSEVYGDPLVHPQDES 162
            ++L   ++     R    STSE++G      QDE+
Sbjct: 118 THLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN 153

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 10/64 (15%)

Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRH 88
           +  R+L+ G  G  G HL+D+++      +VI             +    HPR +    
Sbjct: 3  STPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR---------KALAEHPRLDNPVG 53

Query: 89 DVTE 92
           + E
Sbjct: 54 PLAE 57

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 8/31 (25%), Positives = 18/31 (58%)

Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV 63
          M I++TG  G +G+H+ ++ + N  +   + 
Sbjct: 1  MNIMLTGATGHLGTHITNQAIANHIDHFHIG 31

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287

 Score = 39.4 bits (93), Expect = 8e-04
 Identities = 54/255 (21%), Positives = 93/255 (36%), Gaps = 73/255 (28%)

Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
             R+++TG  G +G  L ++L   E+ ++   D                 +  L   D+T
Sbjct: 5   KERVIITGANGQLGKQLQEEL-NPEEYDIYPFD-----------------KKLL---DIT 43

Query: 92  EPLLIE-------VDQIYHLACPASPIFYKY--------NPVKTIKTNVIGTLNMLGLAK 136
               ++          I H  C A      Y                N IG  N+   ++
Sbjct: 44  NISQVQQVVQEIRPHIIIH--CAA------YTKVDQAEKERDLAYVINAIGARNVAVASQ 95

Query: 137 RVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
            VGA+++  ST  V+        DE    N  PI +   Y   K   E  + + H ++ I
Sbjct: 96  LVGAKLVYISTDYVFQGDRPEGYDEF--HNPAPINI---YGASKYAGEQFVKELHNKYFI 150

Query: 197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR----GEPLTV---QAPGTQTRSFCYVSD 249
            +R + ++  YG           +NF+   IR     E ++V   Q  G+ T    YV+D
Sbjct: 151 -VRTSWLYGKYG-----------NNFVKTMIRLGKEREEISVVADQI-GSPT----YVAD 193

Query: 250 MVDGLIRLMEGENTG 264
           +   + +L+     G
Sbjct: 194 LNVMINKLIHTSLYG 208

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	297
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.98
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.98
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.97
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.97
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.96
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.96
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.96
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.95
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.95
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.94
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.94
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.94
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.93
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.93
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.92
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.92
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.92
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.92
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.92
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.92
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.91
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.91
1spx_A	278	Short-chain reductase family member (5L265); paral	99.91
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.91
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.91
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.91
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.91
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.91
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.91
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.91
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.91
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.9
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.9
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.9
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.9
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.9
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.9
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.9
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.9
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.9
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.9
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.9
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.9
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.9
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.9
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.9
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.9
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.9
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.9
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.9
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.9
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.9
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.9
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.9
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.9
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.9
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.9
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.9
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.9
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.89
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.89
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.89
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.89
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.89
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.89
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.89
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.89
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.89
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.89
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.89
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.89
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.89
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.89
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.89
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.89
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.89
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.89
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.89
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.89
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.89
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.89
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.89
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.89
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.89
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.89
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.89
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.89
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.89
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.89
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.89
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.89
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.89
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.89
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.89
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.89
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.89
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.89
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.89
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.89
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.89
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.89
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.89
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.88
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.88
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.88
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.88
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.88
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.88
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.88
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.88
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.88
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.88
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.88
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.88
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.88
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.88
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.88
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.88
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.88
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.88
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.88
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.88
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.88
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.88
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.88
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.88
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.88
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.88
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.88
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.88
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.88
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.88
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.88
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.88
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.88
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.88
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.88
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.88
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.87
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.87
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.87
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.87
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.87
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.87
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.87
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.87
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.87
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.87
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.87
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.87
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.87
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.87
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.87
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.87
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.87
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.87
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.87
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.87
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.87
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.86
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.86
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.86
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.86
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.86
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.86
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.86
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.86
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.86
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.86
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.86
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.86
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.86
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.86
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.86
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.86
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.86
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.86
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.86
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.85
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.85
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.85
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.85
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.85
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.85
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.85
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.84
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.84
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.84
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.84
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.84
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.84
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.84
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.84
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.83
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.83
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.83
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.82
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.82
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.82
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.82
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.82
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.82
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.81
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.81
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.8
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.79
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.79
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.79
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.77
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.77
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.76
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.74
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.73
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.72
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.71
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.71
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.69
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.68
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.67
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.61
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.56
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.54
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.48
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.48
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.46
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.46
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.44
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.38
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.36
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.03
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.03
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.01
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.99
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.81
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.81
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.78
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.5
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.42
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.41
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.35
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.35
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.34
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.33
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.32
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.31
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.29
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.26
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.26
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	98.17
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.15
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.12
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.12
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	98.11
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.1
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	98.06
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.04
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	98.03
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	98.02
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.0
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	98.0
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.97
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.96
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.96
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.91
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.91
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.9
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.89
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.89
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.88
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.87
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.87
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.86
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.85
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.85
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.84
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.77
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.74
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.74
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.73
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.73
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.72
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.71
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.66
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.6
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.59
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.56
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.55
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.54
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.53
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.52
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.51
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.48
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.45
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.43
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.43
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.42
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.4
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.38
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.37
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.31
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.29
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.26
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.25
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.25
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.19
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.16
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.12
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.1
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.09
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.07
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	97.07
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.04
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.03
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.03
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.02
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.01
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.0
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.98
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	96.97
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.97
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.97
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.94
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.92
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	96.87
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.85
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.84
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.83
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.83
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.81
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	96.81
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	96.78
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.77
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.76
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.76
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.75
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	96.75
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.74
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.73
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	96.71
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	96.66
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.65
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.64
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.63
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.63
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.62
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	96.57
1rm4_O	337	Glyceraldehyde 3-phosphate dehydrogenase A; rossma	96.56
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.55
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.54
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.54
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.53
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.51
3ff4_A	122	Uncharacterized protein; structural genomics, PSI-	96.47
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.41
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.37
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.37
1vm6_A	228	DHPR, dihydrodipicolinate reductase; TM1520, struc	96.36
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.35
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.34
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.34
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.3
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.29
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	96.26
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.25
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.19
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.19
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.19
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.19
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.18
3cmm_A	1015	Ubiquitin-activating enzyme E1 1; UBA1, protein tu	96.17
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.15
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.15
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.15
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.15
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.14
1b7g_O	340	Protein (glyceraldehyde 3-phosphate dehydrogenase;	96.13
1lnq_A	336	MTHK channels, potassium channel related protein;	96.07
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.07
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.03
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	96.0
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.0
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.98
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.97
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	95.95
3b1j_A	339	Glyceraldehyde 3-phosphate dehydrogenase (NADP+);	95.94
1cf2_P	337	Protein (glyceraldehyde-3-phosphate dehydrogenase)	95.94
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.94
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	95.88
1u8f_O	335	GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l	95.85
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.81
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.8
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.77
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	95.76
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.75
3cmc_O	334	GAPDH, glyceraldehyde-3-phosphate dehydrogenase; m	95.74
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	95.73
2x5j_O	339	E4PDH, D-erythrose-4-phosphate dehydrogenase; oxid	95.72
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.7
2czc_A	334	Glyceraldehyde-3-phosphate dehydrogenase; glycolys	95.66
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.64
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	95.63
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.61
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	95.61
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	95.6
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	95.59
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	95.56
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	95.51
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	95.51
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.48
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	95.46
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.44
2duw_A	145	Putative COA-binding protein; ligand binding prote	95.39
1hdg_O	332	Holo-D-glyceraldehyde-3-phosphate dehydrogenase; o	95.35
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	95.34
2d2i_A	380	Glyceraldehyde 3-phosphate dehydrogenase; rossmann	95.32
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	95.32

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=1.6e-41  Score=291.03  Aligned_cols=263  Identities=66%  Similarity=1.108  Sum_probs=225.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~  110 (297)
                      .+|+|||||||||||++|++.|++.| ++|++++|......+.+..+....+++++.+|+.+..+.++|+|||+|+....
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~~~~~  104 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASP  104 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECccccCc
Confidence            46899999999999999999999999 99999999754443333333334578999999999888899999999997654


Q ss_pred             cccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHH
Q 022414          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY  190 (297)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  190 (297)
                      .....++...+++|+.++.+++++|++.++|+||+||.++|+.....+.+|+.|...++..|.+.|+.+|.++|++++.+
T Consensus       105 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  184 (343)
T 2b69_A          105 PNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY  184 (343)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence            43456778889999999999999999999999999999999987667788886665566677789999999999999998


Q ss_pred             HHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCccEEecC
Q 022414          191 HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN  270 (297)
Q Consensus       191 ~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i~~  270 (297)
                      ..+.+++++++||+.+|||+.......++..++..+..++.+.++++++..++++|++|+|++++.+++.+.++.||+++
T Consensus       185 ~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~i~~  264 (343)
T 2b69_A          185 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGN  264 (343)
T ss_dssp             HHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSCCSCEEESC
T ss_pred             HHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCCCCeEEecC
Confidence            88889999999999999998654334577778888888888888888899999999999999999999887788999999


Q ss_pred             CCcccHHHHHHHHHHhhcccCcee
Q 022414          271 PGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       271 ~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      ++.+|+.|+++.+.+.+|.+.++.
T Consensus       265 ~~~~s~~e~~~~i~~~~g~~~~~~  288 (343)
T 2b69_A          265 PEEHTILEFAQLIKNLVGSGSEIQ  288 (343)
T ss_dssp             CCEEEHHHHHHHHHHHHTCCCCEE
T ss_pred             CCCCcHHHHHHHHHHHhCCCCCce
Confidence            999999999999999999876554

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.1e-41  Score=291.23  Aligned_cols=257  Identities=28%  Similarity=0.395  Sum_probs=222.6

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC------CceEEEecccCCc-----ccC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH------PRFELIRHDVTEP-----LLI   96 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dl~~~-----~~~   96 (297)
                      +.+++|+|||||||||||++|++.|+++| ++|++++|......+.+......      .+++++++|+.+.     .+.
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence            44568999999999999999999999999 99999999766544433332211      5799999999886     345


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      ++|+|||+||.........++...+++|+.++.+++++|++.++ +|||+||.++|+.....+++|+     .+..|.+.
T Consensus       100 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~  174 (351)
T 3ruf_A          100 GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEE-----NIGNPLSP  174 (351)
T ss_dssp             TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSH
T ss_pred             CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccC-----CCCCCCCh
Confidence            89999999997665556677888999999999999999999998 8999999999998877788887     57788899


Q ss_pred             HHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHH
Q 022414          176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                      |+.+|.++|++++.+..+.+++++++||+.+|||+.....  ..++..++..+..+..+.+++++++.++++|++|+|++
T Consensus       175 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a  254 (351)
T 3ruf_A          175 YAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQM  254 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence            9999999999999999888999999999999999865432  25788888889999998888999999999999999999


Q ss_pred             HHHHHhcC---CCccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          254 LIRLMEGE---NTGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       254 ~~~~~~~~---~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      ++.+++++   .++.||+++++.+|+.|+++.+.+.+|.+
T Consensus       255 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~  294 (351)
T 3ruf_A          255 NILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLI  294 (351)
T ss_dssp             HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTT
T ss_pred             HHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcc
Confidence            99999873   27799999999999999999999999984

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=4e-40  Score=278.61  Aligned_cols=243  Identities=28%  Similarity=0.399  Sum_probs=211.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~  106 (297)
                      +|+|+|||||||||++|++.|+++| ++|++++|+ ....+ +      .+++++.+|++ .     .+.++|+|||+|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~-~~~~~-~------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~   71 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDG-NTPIILTRS-IGNKA-I------NDYEYRVSDYT-LEDLINQLNDVDAVVHLAA   71 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC-CC------------CCEEEECCCC-HHHHHHHTTTCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCC-CCccc-C------CceEEEEcccc-HHHHHHhhcCCCEEEEccc
Confidence            5899999999999999999999999 999999997 22221 2      27889999998 5     3458999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      .....    ++...+++|+.++.+++++|++.++ ||||+||..+|+.....+++|+     ++..|.+.|+.+|.++|+
T Consensus        72 ~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~  142 (311)
T 3m2p_A           72 TRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEK-----ELPLPDLMYGVSKLACEH  142 (311)
T ss_dssp             CCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTT-----SCCCCSSHHHHHHHHHHH
T ss_pred             cCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCCCCCchhHHHHHHHHH
Confidence            76543    6777889999999999999999998 7999999999998777788887     677888999999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-Cc
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TG  264 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~  264 (297)
                      +++.+..+.+++++++||+.+|||.....  .++..++..+..+..+.++++++..++++|++|+|++++.+++++. ++
T Consensus       143 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~  220 (311)
T 3m2p_A          143 IGNIYSRKKGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSG  220 (311)
T ss_dssp             HHHHHHHHSCCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCE
T ss_pred             HHHHHHHHcCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCC
Confidence            99999988899999999999999986432  5788888888999998888889999999999999999999999984 88


Q ss_pred             cEEecCCCcccHHHHHHHHHHhhcccCceee
Q 022414          265 PINIGNPGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       265 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      .||+++++.+|+.|+++.+.+.+|.+.++..
T Consensus       221 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  251 (311)
T 3m2p_A          221 TFNIGSGDALTNYEVANTINNAFGNKDNLLV  251 (311)
T ss_dssp             EEEECCSCEECHHHHHHHHHHHTTCTTCEEE
T ss_pred             eEEeCCCCcccHHHHHHHHHHHhCCCCccee
Confidence            9999999999999999999999999876543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=3.9e-40  Score=282.74  Aligned_cols=256  Identities=26%  Similarity=0.412  Sum_probs=211.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCC-CCccchhhhcCCCceEEEecccCCccc-----C--CcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLL-----I--EVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~-----~--~~d~  100 (297)
                      ..+|+|||||||||||++|++.|+++|. ++|++++|... ...+.+.......+++++.+|+++...     .  ++|+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            4579999999999999999999999983 56777777642 223333334444689999999998632     2  4999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCC-CCCCCCCCCCCCCCCCCCCChHHH
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDP-LVHPQDESYWGNVNPIGVRSCYDE  178 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~-~~~~~~e~~~~~~~~~~~~~~Y~~  178 (297)
                      |||+|+.........++...+++|+.++.+++++|++.++ +|||+||.++|+.. ...+++|+     ++..|.+.|+.
T Consensus       102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~-----~~~~p~~~Y~~  176 (346)
T 4egb_A          102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEE-----TPLAPNSPYSS  176 (346)
T ss_dssp             EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTT-----SCCCCCSHHHH
T ss_pred             EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCC-----CCCCCCChhHH
Confidence            9999998766556677888999999999999999999998 79999999999876 34567777     67788899999


Q ss_pred             hHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHH
Q 022414          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (297)
Q Consensus       179 sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  258 (297)
                      +|.++|++++.+..+.+++++++||+.+|||+...  ..++..++..+..++.+.++++++..++++|++|+|++++.++
T Consensus       177 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~  254 (346)
T 4egb_A          177 SKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYP--EKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVL  254 (346)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCc--cchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHH
Confidence            99999999999998889999999999999998643  3578888899999998888899999999999999999999999


Q ss_pred             hcCC-CccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          259 EGEN-TGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       259 ~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      +++. +++||+++++.+++.|+++.+.+.+|.+..
T Consensus       255 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  289 (346)
T 4egb_A          255 HKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKK  289 (346)
T ss_dssp             HHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGG
T ss_pred             hcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcc
Confidence            9887 569999999999999999999999998754

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2.8e-40  Score=280.66  Aligned_cols=249  Identities=30%  Similarity=0.467  Sum_probs=215.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC---CCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT---GSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ++|+|+|||||||||++|++.|+++| ++|++++|+..   ...+.+.......+++++.+|+.     ++|+|||+|+.
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~d~vi~~a~~   79 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASG-EEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----DVRLVYHLASH   79 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----TEEEEEECCCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCC-CEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----cCCEEEECCcc
Confidence            47999999999999999999999999 99999999865   23333333333456777788886     79999999998


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      ........++...++ |+.++.+++++|++.++ +|||+||.++|+.....+++|+     ++..|.+.|+.+|.++|++
T Consensus        80 ~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~  153 (321)
T 3vps_A           80 KSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPED-----SPLSPRSPYAASKVGLEMV  153 (321)
T ss_dssp             CCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHH
T ss_pred             CChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCC-----CCCCCCChhHHHHHHHHHH
Confidence            765555667777788 99999999999999998 8999999999998877788887     6777889999999999999


Q ss_pred             HHHHHHHhCC-cEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCcc
Q 022414          187 MFDYHRQHGI-EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP  265 (297)
Q Consensus       187 ~~~~~~~~~~-~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  265 (297)
                      ++.+..+.++ +++++||+.+|||+...  ..++..++..+..++.+.+.++++..++++|++|+|++++.+++++..|.
T Consensus       154 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~g~  231 (321)
T 3vps_A          154 AGAHQRASVAPEVGIVRFFNVYGPGERP--DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPSV  231 (321)
T ss_dssp             HHHHHHSSSSCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCCSE
T ss_pred             HHHHHHHcCCCceEEEEeccccCcCCCC--CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCCCe
Confidence            9999988889 99999999999998644  35788888888888888888999999999999999999999999988679


Q ss_pred             EEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          266 INIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       266 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      ||+++++.+|+.|+++.+. .+|.+.++.
T Consensus       232 ~~i~~~~~~s~~e~~~~i~-~~g~~~~~~  259 (321)
T 3vps_A          232 VNFGSGQSLSVNDVIRILQ-ATSPAAEVA  259 (321)
T ss_dssp             EEESCSCCEEHHHHHHHHH-TTCTTCEEE
T ss_pred             EEecCCCcccHHHHHHHHH-HhCCCCccc
Confidence            9999999999999999999 999887654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=3.5e-39  Score=272.97  Aligned_cols=249  Identities=35%  Similarity=0.516  Sum_probs=209.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccC---CcCEEEEccCCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPAS  109 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~---~~d~vi~~a~~~~  109 (297)
                      |+|||||||||||++|++.|+++| ++|++++|......+..     ..+++++.+|+.+....   .-|+|||+|+...
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~d~vih~A~~~~   74 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYSWGAGIKGDVVFHFAANPE   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECCCSSCCGGGS-----CTTSEEECCCTTSTTTTTTCCCSEEEECCSSCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeCCCCCchhhc-----CCCceEEECccccHHHHhhcCCCEEEECCCCCC
Confidence            789999999999999999999999 99999999765433222     35788999999886421   1299999999766


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHH
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~  188 (297)
                      ......++...+++|+.++.+++++|++.++ +|||+||.++|+.....+++|+     .+..|.+.|+.+|.++|++++
T Consensus        75 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-----~~~~p~~~Y~~sK~~~e~~~~  149 (312)
T 3ko8_A           75 VRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEE-----EPYKPISVYGAAKAAGEVMCA  149 (312)
T ss_dssp             SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCC-----CCCCCCChHHHHHHHHHHHHH
Confidence            5566778889999999999999999999998 8999999999998877778887     677788999999999999999


Q ss_pred             HHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcC-CCeEEecCCceeEeeeeHHHHHHHHHHHHhc---C-C-
Q 022414          189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG---E-N-  262 (297)
Q Consensus       189 ~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~---~-~-  262 (297)
                      .++.+.+++++++||+++|||+..   ..++..++..+..+ ..+.+.+++++.++++|++|+|++++.++++   + . 
T Consensus       150 ~~~~~~g~~~~~lrp~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~  226 (312)
T 3ko8_A          150 TYARLFGVRCLAVRYANVVGPRLR---HGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAP  226 (312)
T ss_dssp             HHHHHHCCEEEEEEECEEECTTCC---SSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCS
T ss_pred             HHHHHhCCCEEEEeeccccCcCCC---CChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCC
Confidence            999888999999999999999853   34666777777666 4566778889999999999999999999988   2 2 


Q ss_pred             CccEEecCCCcccHHHHHHHHHHhhcccCceee
Q 022414          263 TGPINIGNPGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       263 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      ++.||+++++.+++.|+++.+.+.+|.+.++..
T Consensus       227 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~  259 (312)
T 3ko8_A          227 FLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRL  259 (312)
T ss_dssp             EEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEE
T ss_pred             CcEEEEcCCCceeHHHHHHHHHHHhCCCCceee
Confidence            678999999999999999999999998776543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=9.4e-40  Score=283.05  Aligned_cols=256  Identities=28%  Similarity=0.482  Sum_probs=215.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccC-Ccc-----cCCcCEEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-EPL-----LIEVDQIYH  103 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~-----~~~~d~vi~  103 (297)
                      ++|+|||||||||||++|++.|+++ | ++|++++|+.....    ......+++++.+|++ +..     +.++|+|||
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih   97 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTD-WEVFGMDMQTDRLG----DLVKHERMHFFEGDITINKEWVEYHVKKCDVILP   97 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSS-CEEEEEESCCTTTG----GGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCC-CEEEEEeCChhhhh----hhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence            4689999999999999999999998 8 99999999753322    2223468999999999 652     347999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCC-CCCC-CCCChHHHhHH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGN-VNPI-GVRSCYDEGKR  181 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~-~~~~-~~~~~Y~~sK~  181 (297)
                      +|+.........++.+.+++|+.++.+++++|++.+.||||+||.++|+.....+.+|+.... ..+. .|.+.|+.+|.
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~  177 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQ  177 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHH
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHH
Confidence            999877655667888899999999999999999998889999999999987766777764221 0111 46678999999


Q ss_pred             HHHHHHHHHHHHhCCcEEEEeeccccCCCCCC------CChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHH
Q 022414          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNI------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (297)
Q Consensus       182 ~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  255 (297)
                      ++|++++.+..+ +++++++||+.+|||+...      ....++..++..+..++.+.+.+++++.++++|++|+|++++
T Consensus       178 ~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  256 (372)
T 3slg_A          178 LMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM  256 (372)
T ss_dssp             HHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHH
Confidence            999999999877 9999999999999998642      124578889999999999999888999999999999999999


Q ss_pred             HHHhcC----CCccEEecCC-CcccHHHHHHHHHHhhcccCc
Q 022414          256 RLMEGE----NTGPINIGNP-GEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       256 ~~~~~~----~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      .+++++    .+++||++++ +.+|+.|+++.+.+.+|.+.+
T Consensus       257 ~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~  298 (372)
T 3slg_A          257 KIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPE  298 (372)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTT
T ss_pred             HHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcc
Confidence            999986    2679999994 799999999999999998754

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=4.5e-39  Score=277.74  Aligned_cols=255  Identities=25%  Similarity=0.357  Sum_probs=213.9

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHh--cCCCeEEEEecCCCCC------ccchh--hhcCCCceEEEecccCCcc---
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLME--NEKNEVIVVDNYFTGS------KDNLR--KWIGHPRFELIRHDVTEPL---   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~--~g~~~v~~~~r~~~~~------~~~~~--~~~~~~~~~~~~~Dl~~~~---   94 (297)
                      +...+|+|||||||||||+++++.|++  .| ++|++++|+....      .+.+.  ......++.++.+|+++..   
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPK-AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTT-SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCC-CeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            345679999999999999999999999  89 9999999965411      00001  1122346789999999862   


Q ss_pred             ---cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414           95 ---LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus        95 ---~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                         ..++|+|||+||....  ...++...+++|+.++.+++++|++.+++|||+||.++|+.... +.+|+     ++..
T Consensus        85 ~~~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~-~~~E~-----~~~~  156 (362)
T 3sxp_A           85 RLEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA-PNVVG-----KNES  156 (362)
T ss_dssp             HHTTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS-SBCTT-----SCCC
T ss_pred             HhhccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC-CCCCC-----CCCC
Confidence               4689999999996542  56778899999999999999999999999999999999987755 77777     5778


Q ss_pred             CCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCCh--hHHHHHHHHHHcCCCeEEecCCceeEeeeeHHH
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  249 (297)
                      |.+.|+.+|.++|++++.+..+  ++++++||+++|||+......  .++..++..+..+..+.+++++++.++++|++|
T Consensus       157 p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  234 (362)
T 3sxp_A          157 PENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIED  234 (362)
T ss_dssp             CSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHH
T ss_pred             CCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHH
Confidence            8899999999999999887654  899999999999998654321  578888888888888887788889999999999


Q ss_pred             HHHHHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          250 MVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       250 va~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +|++++.+++++..|.||+++++.+++.|+++.+.+.+| +.++.
T Consensus       235 va~ai~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~  278 (362)
T 3sxp_A          235 VIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLG-DFKVT  278 (362)
T ss_dssp             HHHHHHHHTTCSSCEEEEESCSCEEEHHHHHHHHHHHHC-CCEEE
T ss_pred             HHHHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHcC-CCceE
Confidence            999999999988877999999999999999999999999 65543

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=3.3e-39  Score=280.01  Aligned_cols=261  Identities=28%  Similarity=0.407  Sum_probs=206.3

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEE
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIY  102 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi  102 (297)
                      ....+|+|+|||||||||+++++.|+++|.++|++++|......+.+.   ...+++++.+|+++.     .+.++|+||
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  104 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQDEYDYVF  104 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence            345679999999999999999999999975789999997544322221   135789999999875     345899999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-CC-eEEEEecceeecCCCCCCCC--CCCCCCCCCC-CCCChHH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGDPLVHPQD--ESYWGNVNPI-GVRSCYD  177 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~~~~~~~~~~~~~--e~~~~~~~~~-~~~~~Y~  177 (297)
                      |+|+.........++...+++|+.++.+++++|++. ++ +||++||.++|+.....+++  |+.|.  .+. .|.+.|+
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~--~~~~~~~~~Y~  182 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDI--VSLHNNDSPYS  182 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCC--CCSSCCCSHHH
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCccccccc--ccccCCCCchH
Confidence            999876544345677889999999999999999998 88 89999999999876555666  66321  144 6778999


Q ss_pred             HhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCC---------CCCC--hhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM---------NIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       178 ~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~---------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      .+|.++|++++.+..+.+++++++||+.+|||..         ....  ..++..++..+..+.++.+++++++.++++|
T Consensus       183 ~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~  262 (377)
T 2q1s_A          183 MSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIF  262 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEE
Confidence            9999999999999888899999999999999985         2110  3467788888888887777788889999999


Q ss_pred             HHHHHHH-HHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          247 VSDMVDG-LIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       247 v~Dva~~-~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      ++|+|++ ++.+++++..|.||+++++.+|+.|+++.+.+.+|.+.++
T Consensus       263 v~Dva~a~i~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  310 (377)
T 2q1s_A          263 VEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTEL  310 (377)
T ss_dssp             HHHHHHHHHHHHHHCCTTEEEECCCCCCEEHHHHHHHHHHHHTCCSCC
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEecCCCceeHHHHHHHHHHHhCCCCCc
Confidence            9999999 9999988766699999999999999999999999987554

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-38  Score=269.68  Aligned_cols=248  Identities=31%  Similarity=0.465  Sum_probs=207.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc----cCCcCEEEEccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL----LIEVDQIYHLACP  107 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~----~~~~d~vi~~a~~  107 (297)
                      ||+|||||||||||++|++.|+++| +.|.+..|+. ...+..     ...+.++.+|+++..    +.++|+|||+|+.
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~-~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~   73 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSS-GNEEFV-----NEAARLVKADLAADDIKDYLKGAEEVWHIAAN   73 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSS-CCGGGS-----CTTEEEECCCTTTSCCHHHHTTCSEEEECCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCC-CChhhc-----CCCcEEEECcCChHHHHHHhcCCCEEEECCCC
Confidence            4789999999999999999999999 6666544432 222111     357889999998732    2379999999997


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      ........++...+++|+.++.+++++|++.++ +|||+||..+|+.....+.+|+     .+..|.+.|+.+|.++|.+
T Consensus        74 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK~~~e~~  148 (313)
T 3ehe_A           74 PDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPED-----YPTHPISLYGASKLACEAL  148 (313)
T ss_dssp             CCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHH
T ss_pred             CChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCC-----CCCCCCCHHHHHHHHHHHH
Confidence            655556678889999999999999999999998 8999999999998877777777     5777889999999999999


Q ss_pred             HHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcC-CCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-Cc
Q 022414          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TG  264 (297)
Q Consensus       187 ~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~  264 (297)
                      ++.++.+.+++++++||+.+|||+..   ..++..++..+..+ ..+.+++++++.++++|++|+|++++.+++... ++
T Consensus       149 ~~~~~~~~g~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~  225 (313)
T 3ehe_A          149 IESYCHTFDMQAWIYRFANVIGRRST---HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVN  225 (313)
T ss_dssp             HHHHHHHTTCEEEEEECSCEESTTCC---CSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEE
T ss_pred             HHHHHHhcCCCEEEEeeccccCcCCC---cChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCc
Confidence            99999888999999999999999853   24677777777766 456678899999999999999999999999554 67


Q ss_pred             cEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          265 PINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       265 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +||+++++++|+.|+++.+.+.+|.+.++.
T Consensus       226 ~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  255 (313)
T 3ehe_A          226 IFNIGSEDQIKVKRIAEIVCEELGLSPRFR  255 (313)
T ss_dssp             EEECCCSCCEEHHHHHHHHHHHTTCCCEEE
T ss_pred             eEEECCCCCeeHHHHHHHHHHHhCCCCceE
Confidence            999999999999999999999999876554

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=1.2e-38  Score=274.16  Aligned_cols=257  Identities=26%  Similarity=0.342  Sum_probs=214.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cC---CCceEEEecccCCcc-----cCCc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IG---HPRFELIRHDVTEPL-----LIEV   98 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~---~~~~~~~~~Dl~~~~-----~~~~   98 (297)
                      ..+|+|+|||||||||+++++.|+++| ++|++++|+.....+.+...   +.   ..++.++.+|+++..     +.++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  103 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV  103 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence            457999999999999999999999999 99999999754332222211   11   147889999998763     3479


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHH
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYD  177 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~  177 (297)
                      |+|||+||.........++...+++|+.++.+++++|++.++ +||++||.++|+.....+.+|+     ++..|.+.|+
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~-----~~~~~~~~Y~  178 (352)
T 1sb8_A          104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-----TIGKPLSPYA  178 (352)
T ss_dssp             SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHHH
T ss_pred             CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCC-----CCCCCCChhH
Confidence            999999987654334467788899999999999999999998 8999999999987766677777     5667788999


Q ss_pred             HhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCC--ChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHH
Q 022414          178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (297)
Q Consensus       178 ~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  255 (297)
                      .+|.++|.+++.++.+.+++++++||+.+|||.....  ...++..++..+..+.++.+.+++++.+++++++|+|++++
T Consensus       179 ~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~  258 (352)
T 1sb8_A          179 VTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANL  258 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHH
Confidence            9999999999999888899999999999999986433  12467777788888888888888999999999999999999


Q ss_pred             HHHhcC---CCccEEecCCCcccHHHHHHHHHHhh---cccCc
Q 022414          256 RLMEGE---NTGPINIGNPGEFTMLELAENVKEVN---FYLGR  292 (297)
Q Consensus       256 ~~~~~~---~~~~~~i~~~~~~s~~e~~~~i~~~~---g~~~~  292 (297)
                      .++..+   .++.||+++++.+|+.|+++.+.+.+   |.+..
T Consensus       259 ~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~  301 (352)
T 1sb8_A          259 LAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYH  301 (352)
T ss_dssp             HHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCC
Confidence            988863   26799999999999999999999999   87654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=4.8e-38  Score=269.95  Aligned_cols=251  Identities=27%  Similarity=0.361  Sum_probs=209.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEecCCCC-CccchhhhcCCCceEEEecccCCcc-----cCCcCEEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTG-SKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYH  103 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~  103 (297)
                      +|+|||||||||||+++++.|+++  | ++|++++|.... ..+.+.. +...+++++.+|+++..     ..++|+|||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPD-VHVTVLDKLTYAGNKANLEA-ILGDRVELVVGDIADAELVDKLAAKADAIVH   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCGGGTGG-GCSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCC-CEEEEEeCCCCCCChhHHhh-hccCCeEEEECCCCCHHHHHHHhhcCCEEEE
Confidence            589999999999999999999999  7 999999996532 2222222 22357899999999863     347899999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCC------------CCCCCCCCCCCCCCC
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLV------------HPQDESYWGNVNPIG  171 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~------------~~~~e~~~~~~~~~~  171 (297)
                      +||.........++...+++|+.++.+++++|.+.+++|||+||..+|+....            .+++|+     ++..
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~-----~~~~  156 (348)
T 1oc2_A           82 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE-----TNYN  156 (348)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT-----SCCC
T ss_pred             CCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCC-----CCCC
Confidence            99976543344677888999999999999999998889999999999986432            455555     5667


Q ss_pred             CCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHH
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  251 (297)
                      +.+.|+.+|.++|.+++.+..+.+++++++||+.+|||....  ..++..++..+..+..+.+++++.+.++++|++|+|
T Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  234 (348)
T 1oc2_A          157 PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI--EKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHS  234 (348)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT--TSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc--cchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHH
Confidence            788999999999999999988889999999999999998532  346677778888888888888889999999999999


Q ss_pred             HHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          252 DGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       252 ~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      ++++.+++++. ++.||+++++.+++.|+++.+.+.+|.+.
T Consensus       235 ~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  275 (348)
T 1oc2_A          235 TGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPK  275 (348)
T ss_dssp             HHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred             HHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCc
Confidence            99999998766 56999999999999999999999999864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=4.8e-38  Score=265.84  Aligned_cols=250  Identities=30%  Similarity=0.448  Sum_probs=208.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC--CcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi~~a  105 (297)
                      |+|+||||+||||+++++.|+++| ++|++++|......+.+     ..++.++.+|+++..     ..  ++|+|||+|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a   74 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARG-LEVAVLDNLATGKRENV-----PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQA   74 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT-CEEEEECCCSSCCGGGS-----CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCC-CEEEEEECCCcCchhhc-----ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECc
Confidence            689999999999999999999999 99999998543322211     135778899998763     22  799999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecc-eeecC-CCCCCCCCCCCCCCCCCCCCChHHHhHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS-EVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~-~~~~~-~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (297)
                      +.........++...+++|+.++.+++++|++.++ +||++||. .+|+. ....+.+|+     ++..|.+.|+.+|.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~-----~~~~~~~~Y~~sK~~  149 (311)
T 2p5y_A           75 AQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEET-----WPPRPKSPYAASKAA  149 (311)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTT-----SCCCCCSHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCC-----CCCCCCChHHHHHHH
Confidence            87654344567788899999999999999999998 89999999 88886 444566666     466677899999999


Q ss_pred             HHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCCeEEe-----cCCceeEeeeeHHHHHHHHHH
Q 022414          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQ-----APGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       183 ~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      +|++++.+..+.+++++++||+++|||+..... ..++..++..+..+.++.++     +++.+.++++|++|+|++++.
T Consensus       150 ~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  229 (311)
T 2p5y_A          150 FEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHAL  229 (311)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHH
Confidence            999999998888999999999999999864432 35677777878888888777     788889999999999999999


Q ss_pred             HHhcCCCccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          257 LMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       257 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +++++ ++.||+++++.+|+.|+++.+.+.+|.+.++.
T Consensus       230 ~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  266 (311)
T 2p5y_A          230 ALFSL-EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQ  266 (311)
T ss_dssp             HHHHC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEE
T ss_pred             HHhCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCCce
Confidence            99876 78999999999999999999999999876543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=8.6e-38  Score=267.08  Aligned_cols=253  Identities=28%  Similarity=0.397  Sum_probs=208.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecCCC-CCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~  104 (297)
                      +|+|||||||||||+++++.|+++| .++|++++|... ...+.+.......++.++.+|+++..     ..++|+|||+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            5899999999999999999999986 289999998642 22233332222357899999999863     2479999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (297)
                      ||.........++...+++|+.++.+++++|.+.+.  +||++||.++|+.....+++|+     ++..+.+.|+.+|.+
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK~~  157 (336)
T 2hun_A           83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTEN-----DRLMPSSPYSATKAA  157 (336)
T ss_dssp             CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTT-----BCCCCCSHHHHHHHH
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCC-----CCCCCCCccHHHHHH
Confidence            997653334456788899999999999999998874  8999999999987655667776     566777899999999


Q ss_pred             HHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC
Q 022414          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       183 ~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      +|++++.+..+.+++++++||+.+|||....  ..++..++..+..++.+.+++++++.++++|++|+|++++.+++++.
T Consensus       158 ~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  235 (336)
T 2hun_A          158 SDMLVLGWTRTYNLNASITRCTNNYGPYQFP--EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE  235 (336)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEECEEESTTCCT--TSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc--CchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence            9999999988889999999999999998533  34677778888888888888888899999999999999999998766


Q ss_pred             -CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          263 -TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       263 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                       ++.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       236 ~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  265 (336)
T 2hun_A          236 SREIYNISAGEEKTNLEVVKIILRLMGKGE  265 (336)
T ss_dssp             TTCEEEECCSCEECHHHHHHHHHHHTTCCS
T ss_pred             CCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Confidence             56999999999999999999999999864

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=7.5e-38  Score=267.97  Aligned_cols=258  Identities=23%  Similarity=0.351  Sum_probs=211.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc-------CCcCEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL-------IEVDQI  101 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~-------~~~d~v  101 (297)
                      ++|+|+|||||||||+++++.|+++| ++|++++|......+......  ...++.++++|+++...       .++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHG-YDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence            56899999999999999999999999 999999997655443332221  12478899999998631       279999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhH
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      ||+||.........++.+.++.|+.++.+++++|++.++ +||++||..+|+.....+++|+     .+..|.+.|+.+|
T Consensus        83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~sK  157 (341)
T 3enk_A           83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDET-----FPLSATNPYGQTK  157 (341)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTT-----SCCBCSSHHHHHH
T ss_pred             EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCC-----CCCCCCChhHHHH
Confidence            999998765555667788899999999999999999998 8999999999998877778887     5677888999999


Q ss_pred             HHHHHHHHHHHHHhC-CcEEEEeeccccCCCCCC------C--ChhHHHHHHHHHHcC-CCeEEec------CCceeEee
Q 022414          181 RVAETLMFDYHRQHG-IEIRIARIFNTYGPRMNI------D--DGRVVSNFIAQAIRG-EPLTVQA------PGTQTRSF  244 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~-~~~~ivrp~~v~G~~~~~------~--~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~  244 (297)
                      .++|++++.++.+.+ ++++++||+++|||....      .  ...+++.+....... ..+.+++      ++++.+++
T Consensus       158 ~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  237 (341)
T 3enk_A          158 LMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDY  237 (341)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECE
T ss_pred             HHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEee
Confidence            999999999887765 999999999999996421      1  133555444434332 4566667      78999999


Q ss_pred             eeHHHHHHHHHHHHhc----CCCccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          245 CYVSDMVDGLIRLMEG----ENTGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~----~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +|++|+|++++.++++    ..+++||+++++.+|+.|+++.+.+.+|.+.++.
T Consensus       238 i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  291 (341)
T 3enk_A          238 IHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYE  291 (341)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEE
T ss_pred             EEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCccee
Confidence            9999999999999986    3378999999999999999999999999876554

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=7.5e-39  Score=274.85  Aligned_cols=247  Identities=25%  Similarity=0.317  Sum_probs=208.2

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYH  103 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~  103 (297)
                      ...+|+|||||||||||++|++.|+++| ++|++++|+...           .++.++.+|+++..     +.++|+|||
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih   83 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLH   83 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTT-CCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEE
Confidence            3457999999999999999999999999 999999996533           36788999998863     458999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecC--CCCCCCCCCCCCCCCCCCCCChHHHhH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGD--PLVHPQDESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~--~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      +|+.....  .......+++|+.++.+++++|++.++ +|||+||.++|+.  ....+++|+     ++..|.+.|+.+|
T Consensus        84 ~A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~-----~~~~~~~~Y~~sK  156 (347)
T 4id9_A           84 LGAFMSWA--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTED-----HPLCPNSPYGLTK  156 (347)
T ss_dssp             CCCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTT-----SCCCCCSHHHHHH
T ss_pred             CCcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCC-----CCCCCCChHHHHH
Confidence            99876532  233478899999999999999999998 8999999999998  455667777     6777889999999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeecccc-------------CCCCCCC---------ChhHHHHHHHHHHcCCCeEEecCC
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTY-------------GPRMNID---------DGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~-------------G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                      .++|++++.+..+.+++++++||+.+|             ||+....         ...++..++.....+.++.+++++
T Consensus       157 ~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  236 (347)
T 4id9_A          157 LLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARN  236 (347)
T ss_dssp             HHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEEC
T ss_pred             HHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCC
Confidence            999999999998889999999999999             7763221         135677788888888888888888


Q ss_pred             ceeEee----eeHHHHHHHHHHHHhcCC--CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          239 TQTRSF----CYVSDMVDGLIRLMEGEN--TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       239 ~~~~~~----i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +..+++    +|++|+|++++.+++++.  ++.||+++++.+|+.|+++.+.+.+|.+.++.
T Consensus       237 ~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  298 (347)
T 4id9_A          237 ENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTV  298 (347)
T ss_dssp             TTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEE
T ss_pred             CcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCcee
Confidence            888888    999999999999999884  77999999999999999999999999876554

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.1e-37  Score=264.80  Aligned_cols=252  Identities=31%  Similarity=0.432  Sum_probs=210.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc-C-C---CeEEEEecCCCC-CccchhhhcCCCceEEEecccCCcc-----cCCcCEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN-E-K---NEVIVVDNYFTG-SKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQI  101 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~-g-~---~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~v  101 (297)
                      |+|+|||||||||+++++.|+++ + .   ++|++++|.... ..+.+.......++.++.+|+++..     +.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            68999999999999999999996 4 2   789999986532 2223332222357899999998863     3579999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhH
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      ||+||.........++...+++|+.++.+++++|++.++ +|||+||.++|+.....+++|+     ++..|.+.|+.+|
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAASK  155 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTT-----SCCCCCSHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCC-----CCCCCCCchHHHH
Confidence            999987654334466778899999999999999999998 9999999999987655566776     5667788999999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhc
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                      .++|.+++.+..+.+++++++||+.+|||....  ..++..++..+..++.+.+++++++.++++|++|+|++++.++++
T Consensus       156 ~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  233 (337)
T 1r6d_A          156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG  233 (337)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC--CChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhC
Confidence            999999999988889999999999999998533  346777788888888888888899999999999999999999987


Q ss_pred             CC-CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          261 EN-TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       261 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +. ++.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       234 ~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  265 (337)
T 1r6d_A          234 GRAGEIYHIGGGLELTNRELTGILLDSLGADW  265 (337)
T ss_dssp             CCTTCEEEECCCCEEEHHHHHHHHHHHHTCCG
T ss_pred             CCCCCEEEeCCCCCccHHHHHHHHHHHhCCCc
Confidence            66 56999999999999999999999999864

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=9.7e-38  Score=265.11  Aligned_cols=250  Identities=27%  Similarity=0.309  Sum_probs=206.6

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-----C--CcCE
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----I--EVDQ  100 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-----~--~~d~  100 (297)
                      ..++.|+|||||||||||+++++.|+++| ++|++++|+... . .    +   ++.++.+|+++...     .  ++|+
T Consensus         8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~-~-~----l---~~~~~~~Dl~d~~~~~~~~~~~~~d~   77 (321)
T 2pk3_A            8 HHHGSMRALITGVAGFVGKYLANHLTEQN-VEVFGTSRNNEA-K-L----P---NVEMISLDIMDSQRVKKVISDIKPDY   77 (321)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCTTC-C-C----T---TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cccCcceEEEECCCChHHHHHHHHHHHCC-CEEEEEecCCcc-c-c----c---eeeEEECCCCCHHHHHHHHHhcCCCE
Confidence            34567999999999999999999999999 999999997543 1 1    1   68889999988632     2  3899


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-CC-eEEEEecceeecCC--CCCCCCCCCCCCCCCCCCCChH
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGDP--LVHPQDESYWGNVNPIGVRSCY  176 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~~~~~~~--~~~~~~e~~~~~~~~~~~~~~Y  176 (297)
                      |||+||.........++...+++|+.++.+++++|++. ++ +||++||..+|+..  ...+++|+     ++..|.+.|
T Consensus        78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~-----~~~~~~~~Y  152 (321)
T 2pk3_A           78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEE-----NQLRPMSPY  152 (321)
T ss_dssp             EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTT-----SCCBCCSHH
T ss_pred             EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCC-----CCCCCCCcc
Confidence            99999976654455678889999999999999999876 46 89999999999876  55677777     566778899


Q ss_pred             HHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHc---C--CCeEEecCCceeEeeeeHHHHH
Q 022414          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR---G--EPLTVQAPGTQTRSFCYVSDMV  251 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~v~Dva  251 (297)
                      +.+|.++|.+++.+..+.+++++++||+++|||+...  ..++..++..+..   +  ..+.+.++++..+++++++|+|
T Consensus       153 ~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva  230 (321)
T 2pk3_A          153 GVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV  230 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC--CchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence            9999999999999988889999999999999998643  2355666666555   6  5667778888899999999999


Q ss_pred             HHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          252 DGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       252 ~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      ++++.+++++. ++.||+++++.+++.|+++.+.+.+|.+.++.
T Consensus       231 ~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  274 (321)
T 2pk3_A          231 QAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTE  274 (321)
T ss_dssp             HHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEE
T ss_pred             HHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCcee
Confidence            99999998875 67999999999999999999999999876543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-37  Score=265.61  Aligned_cols=256  Identities=20%  Similarity=0.200  Sum_probs=208.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc-cchhhhcCCCceEEEecccCCccc-----C--CcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLL-----I--EVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~-----~--~~d~v  101 (297)
                      .++|+|||||||||||+++++.|+++| ++|++++|+..... ..+.......+++++.+|+++...     .  ++|+|
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence            457999999999999999999999999 99999999754322 112221123468899999987632     2  47999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHh
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      ||+||.........++...+++|+.++.+++++|++.++  +||++||.++|+.....+++|+     ++..|.+.|+.+
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~s  165 (335)
T 1rpn_A           91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN-----TPFYPRSPYGVA  165 (335)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHH
T ss_pred             EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcc-----cCCCCCChhHHH
Confidence            999997654444567888999999999999999999884  8999999999998766677777     566778899999


Q ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCC-eEEecCCceeEeeeeHHHHHHHHHHH
Q 022414          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGLIRL  257 (297)
Q Consensus       180 K~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~  257 (297)
                      |.++|.+++.+..+.+++++++||+.+|||+..... ...+..++..+..+.. ...++++++.++++|++|+|++++.+
T Consensus       166 K~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~  245 (335)
T 1rpn_A          166 KLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLM  245 (335)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHH
Confidence            999999999998888999999999999999754322 2345566666666653 34568889999999999999999999


Q ss_pred             HhcCCCccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          258 MEGENTGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       258 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      ++++..+.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       246 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  279 (335)
T 1rpn_A          246 LQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDY  279 (335)
T ss_dssp             HHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred             HhcCCCCEEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence            9988788999999999999999999999999863

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.1e-37  Score=270.48  Aligned_cols=256  Identities=26%  Similarity=0.341  Sum_probs=210.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~  104 (297)
                      .++|+|+|||||||||+++++.|+++| ++|++++|+.......     ...+++++.+|+++..     +.++|+|||+
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~  100 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHMTE-----DMFCDEFHLVDLRVMENCLKVTEGVDHVFNL  100 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCSSSCG-----GGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCC-CeEEEEECCCccchhh-----ccCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence            357899999999999999999999999 9999999975432211     1246889999998763     3579999999


Q ss_pred             cCCCCCccc-ccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCC-----CCCCCCCCCCCCCCCCCChHH
Q 022414          105 ACPASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV-----HPQDESYWGNVNPIGVRSCYD  177 (297)
Q Consensus       105 a~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~-----~~~~e~~~~~~~~~~~~~~Y~  177 (297)
                      |+....... ..++...+++|+.++.+++++|++.++ +|||+||..+|+....     .+++|+.+   .+..|.+.|+
T Consensus       101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~---~~~~~~~~Y~  177 (379)
T 2c5a_A          101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDA---WPAEPQDAFG  177 (379)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGG---SSBCCSSHHH
T ss_pred             ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccC---CCCCCCChhH
Confidence            987653222 567888999999999999999999998 9999999999985432     23445421   1455678899


Q ss_pred             HhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCC-eEEecCCceeEeeeeHHHHHHHH
Q 022414          178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       178 ~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      .+|.++|++++.+..+.+++++++||+.+|||......  ..++..++..+..+.. +.+++++++.++++|++|+|+++
T Consensus       178 ~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai  257 (379)
T 2c5a_A          178 LEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV  257 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHH
Confidence            99999999999998888999999999999999864322  1367777877777765 77788888999999999999999


Q ss_pred             HHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          255 IRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       255 ~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +.+++++.++.||+++++.+++.|+++.+.+.+|.+.++.
T Consensus       258 ~~~l~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  297 (379)
T 2c5a_A          258 LRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH  297 (379)
T ss_dssp             HHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE
T ss_pred             HHHhhccCCCeEEeCCCCccCHHHHHHHHHHHhCCCCcee
Confidence            9999987788999999999999999999999999876554

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=2.3e-37  Score=263.81  Aligned_cols=252  Identities=25%  Similarity=0.370  Sum_probs=205.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC--CcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi~~  104 (297)
                      ||+|+|||||||||+++++.|+++| ++|++++|......+.+    . .+++++.+|+++..     ..  ++|+|||+
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~   74 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEG-LSVVVVDNLQTGHEDAI----T-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHF   74 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGS----C-TTSEEEECCTTCHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCCCcCchhhc----C-CCcEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            4899999999999999999999999 99999998654332221    1 26889999998763     23  79999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (297)
                      |+.........++...+++|+.++.+++++|++.++ +||++||.++|+.....+++|+     ++..|.+.|+.+|.++
T Consensus        75 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~  149 (330)
T 2c20_A           75 AADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEE-----TMTNPTNTYGETKLAI  149 (330)
T ss_dssp             CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTT-----SCCCCSSHHHHHHHHH
T ss_pred             CcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcC-----CCCCCCChHHHHHHHH
Confidence            987654334467788899999999999999999998 8999999999987766677777     5667788999999999


Q ss_pred             HHHHHHHHHHhCCcEEEEeeccccCCCCCC-------CChhHHHHHHHHHHc-CCCeEEec------CCceeEeeeeHHH
Q 022414          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNI-------DDGRVVSNFIAQAIR-GEPLTVQA------PGTQTRSFCYVSD  249 (297)
Q Consensus       184 e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~v~D  249 (297)
                      |++++.+..+.+++++++||+.+|||+...       ....++..++..... +..+.+++      ++++.++++|++|
T Consensus       150 e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~D  229 (330)
T 2c20_A          150 EKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVED  229 (330)
T ss_dssp             HHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHH
T ss_pred             HHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHH
Confidence            999999988789999999999999996321       113456666554443 34566666      6788999999999


Q ss_pred             HHHHHHHHHhcC----CCccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          250 MVDGLIRLMEGE----NTGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       250 va~~~~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +|++++.+++++    .++.||+++++.+|+.|+++.+.+.+|.+.++.
T Consensus       230 va~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  278 (330)
T 2c20_A          230 LVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAE  278 (330)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEE
T ss_pred             HHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCcee
Confidence            999999999864    257999999999999999999999999875543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=3.9e-37  Score=263.86  Aligned_cols=254  Identities=28%  Similarity=0.478  Sum_probs=207.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~a  105 (297)
                      |+|+|||||||||+++++.|+++ | ++|++++|+....    .......+++++.+|+++..      ..++|+|||+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A   75 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDH-YEVYGLDIGSDAI----SRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTT-CEEEEEESCCGGG----GGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCC-CEEEEEeCCcchH----HHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence            68999999999999999999998 8 9999999964322    22223457899999998731      23699999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCC-CC-CCCCChHHHhHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNV-NP-IGVRSCYDEGKRVA  183 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~-~~~~~~Y~~sK~~~  183 (297)
                      |...+.....++...+++|+.++.+++++|++.+.+|||+||.++|+.....+++|+.+... .+ ..|.+.|+.+|.++
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~  155 (345)
T 2bll_A           76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL  155 (345)
T ss_dssp             CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHH
T ss_pred             cccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHH
Confidence            97654444467778899999999999999999888899999999998776566677643211 11 13456899999999


Q ss_pred             HHHHHHHHHHhCCcEEEEeeccccCCCCCC------CChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHH
Q 022414          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNI------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL  257 (297)
Q Consensus       184 e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  257 (297)
                      |++++.+.++.+++++++||+.+|||+...      ....++..++..+..+..+.+++++++.++++|++|+|++++.+
T Consensus       156 e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  235 (345)
T 2bll_A          156 DRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI  235 (345)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHH
Confidence            999999988889999999999999998542      11346778888888888888888888999999999999999999


Q ss_pred             HhcCC----CccEEecCCC-cccHHHHHHHHHHhhcccC
Q 022414          258 MEGEN----TGPINIGNPG-EFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       258 ~~~~~----~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~  291 (297)
                      ++++.    ++.||+++++ .+|+.|+++.+.+.+|.+.
T Consensus       236 ~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~  274 (345)
T 2bll_A          236 IENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  274 (345)
T ss_dssp             HHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT
T ss_pred             HhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            98752    5689999986 8999999999999998764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=6.5e-38  Score=265.59  Aligned_cols=248  Identities=25%  Similarity=0.343  Sum_probs=201.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC--CcCEE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQI  101 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~v  101 (297)
                      .+++|+|||||||||||++|++.|+++| +      +.   ...       ...++++.+|+++..     +.  ++|+|
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~------~~---~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~d~V   65 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGA-G------LP---GED-------WVFVSSKDADLTDTAQTRALFEKVQPTHV   65 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTT-C------CT---TCE-------EEECCTTTCCTTSHHHHHHHHHHSCCSEE
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcC-C------cc---ccc-------ccccCceecccCCHHHHHHHHhhcCCCEE
Confidence            4568999999999999999999999999 5      11   000       013444567887753     22  49999


Q ss_pred             EEccCCCCC-cccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC-hHHH
Q 022414          102 YHLACPASP-IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS-CYDE  178 (297)
Q Consensus       102 i~~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~-~Y~~  178 (297)
                      ||+|+.... .....++...+++|+.++.+++++|++.++ ||||+||.++|+.....+++|+.+... +..|.. .|+.
T Consensus        66 ih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~-~~~p~~~~Y~~  144 (319)
T 4b8w_A           66 IHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNG-PPHNSNFGYSY  144 (319)
T ss_dssp             EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBS-CCCSSSHHHHH
T ss_pred             EECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccC-CCCCCcchHHH
Confidence            999997542 234567888999999999999999999998 899999999999887778888743221 344444 6999


Q ss_pred             hHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCC--ChhHHHHHHHH----HHcCCCeEEecCCceeEeeeeHHHHHH
Q 022414          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQ----AIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       179 sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      +|.++|++++.+.++.+++++++||+.+|||+....  ...+++.++..    +..++.+.+++++++.++++|++|+|+
T Consensus       145 sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  224 (319)
T 4b8w_A          145 AKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQ  224 (319)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHH
Confidence            999999999999988899999999999999986542  13356666665    788888988899999999999999999


Q ss_pred             HHHHHHhcCC---CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          253 GLIRLMEGEN---TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       253 ~~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +++.+++++.   ++.||+++++.+|+.|+++.+.+.+|.+.++.
T Consensus       225 a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  269 (319)
T 4b8w_A          225 LFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVT  269 (319)
T ss_dssp             HHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEE
T ss_pred             HHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEE
Confidence            9999998854   45899999999999999999999999876654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.1e-36  Score=261.51  Aligned_cols=255  Identities=25%  Similarity=0.385  Sum_probs=205.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC------Cccchhhhc--CCCceEEEecccCCcc-----cC--
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG------SKDNLRKWI--GHPRFELIRHDVTEPL-----LI--   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~------~~~~~~~~~--~~~~~~~~~~Dl~~~~-----~~--   96 (297)
                      +|+|+|||||||||+++++.|+++| ++|++++|....      ..+.+..+.  ...+++++.+|+++..     ..  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTT-CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            5899999999999999999999999 999999986543      222222111  1246889999998863     22  


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC-CC
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RS  174 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~-~~  174 (297)
                      ++|+|||+||.........++...+++|+.++.+++++|++.++ +||++||.++|+.....+++|+     ++..| .+
T Consensus        81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~-----~~~~p~~~  155 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEA-----HPTGGCTN  155 (348)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSS
T ss_pred             CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCC-----CCCCCCCC
Confidence            79999999997654334567788899999999999999999998 8999999999987766777777     45555 78


Q ss_pred             hHHHhHHHHHHHHHHHHHHhC--CcEEEEeeccccCCCC------CCC--ChhHHHHHHHHHH-cCCCeEEec------C
Q 022414          175 CYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRM------NID--DGRVVSNFIAQAI-RGEPLTVQA------P  237 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~~~--~~~~ivrp~~v~G~~~------~~~--~~~~~~~~~~~~~-~~~~~~~~~------~  237 (297)
                      .|+.+|.++|.+++.++.+ +  ++++++||+++|||..      ...  ...++..++.... .+..+.+++      +
T Consensus       156 ~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  234 (348)
T 1ek6_A          156 PYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTED  234 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSS
T ss_pred             chHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCC
Confidence            9999999999999998876 5  9999999999999953      111  1346666666666 566677766      5


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcC--C-C-ccEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGE--N-T-GPINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~--~-~-~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      +++.++++|++|+|++++.+++++  . + +.||+++++.+|+.|+++.+.+.+|.+.++
T Consensus       235 g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  294 (348)
T 1ek6_A          235 GTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPY  294 (348)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCE
T ss_pred             CceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCce
Confidence            788899999999999999999864  2 3 699999999999999999999999987554

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.6e-36  Score=261.78  Aligned_cols=251  Identities=27%  Similarity=0.421  Sum_probs=207.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCC-CCccchhhhcCCCceEEEecccCCcc-----cC--CcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi~  103 (297)
                      |+||||||+||||+++++.|++. | ++|++++|... ...+.+..+....++.++.+|+++..     +.  ++|+|||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQ-DTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCS-CEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCC-CeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            68999999999999999999998 7 89999998652 22223332222357899999999862     22  7999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc--CC--------eEEEEecceeecCCCC--C--------CCCCCC
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV--GA--------RILLTSTSEVYGDPLV--H--------PQDESY  163 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~--------r~v~~Ss~~~~~~~~~--~--------~~~e~~  163 (297)
                      +||.........++...+++|+.++.+++++|.+.  ++        +||++||.++|+....  .        +++|+ 
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~-  158 (361)
T 1kew_A           80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET-  158 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT-
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC-
Confidence            99976543345677888999999999999999987  64        8999999999986531  1        45555 


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                          ++..+.+.|+.+|.++|.+++.+..+.+++++++||+.+|||....  ..++..++..+..++.+.+++++.+.++
T Consensus       159 ----~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (361)
T 1kew_A          159 ----TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYGKGDQIRD  232 (361)
T ss_dssp             ----SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCEEEETTSCCEEE
T ss_pred             ----CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc--ccHHHHHHHHHHcCCCceEcCCCceeEe
Confidence                5667788999999999999999988889999999999999998532  3466777788888888888888899999


Q ss_pred             eeeHHHHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          244 FCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      ++|++|+|++++.+++++. ++.||+++++.+++.|+++.+.+.+|.+.
T Consensus       233 ~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  281 (361)
T 1kew_A          233 WLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIV  281 (361)
T ss_dssp             EEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHS
T ss_pred             eEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcC
Confidence            9999999999999998766 56999999999999999999999999764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-37  Score=259.67  Aligned_cols=227  Identities=22%  Similarity=0.239  Sum_probs=196.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC--CcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi~~a  105 (297)
                      |+|+|||||||||+++++.|+++| ++|++++|.                    ++|+.+..     ..  ++|+|||+|
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~--------------------~~D~~d~~~~~~~~~~~~~d~vi~~a   64 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEE-YDIYPFDKK--------------------LLDITNISQVQQVVQEIRPHIIIHCA   64 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTT-EEEEEECTT--------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCC-CEEEEeccc--------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence            589999999999999999999999 999999983                    14555431     12  699999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      +.........++...+++|+.++.+++++|++.++|+||+||.++|+.....+++|+     ++..|.+.|+.+|.++|+
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~  139 (287)
T 3sc6_A           65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEF-----HNPAPINIYGASKYAGEQ  139 (287)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTT-----SCCCCCSHHHHHHHHHHH
T ss_pred             cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCC-----CCCCCCCHHHHHHHHHHH
Confidence            987655556788899999999999999999999999999999999998877788888     677888999999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCcc
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP  265 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  265 (297)
                      +++.+.    .+++++||+.+|||+.    ..++..++.....+..+.+.+  ++.++++|++|+|++++.+++++.+|.
T Consensus       140 ~~~~~~----~~~~ilR~~~v~G~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~  209 (287)
T 3sc6_A          140 FVKELH----NKYFIVRTSWLYGKYG----NNFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSLYGT  209 (287)
T ss_dssp             HHHHHC----SSEEEEEECSEECSSS----CCHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCCCEE
T ss_pred             HHHHhC----CCcEEEeeeeecCCCC----CcHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCCCCe
Confidence            987753    4689999999999873    357778888888888777765  478999999999999999999988889


Q ss_pred             EEecCCCcccHHHHHHHHHHhhcccCceee
Q 022414          266 INIGNPGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       266 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      ||+++++.+|+.|+++.+.+.+|.+.++.+
T Consensus       210 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  239 (287)
T 3sc6_A          210 YHVSNTGSCSWFEFAKKIFSYANMKVNVLP  239 (287)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHTCCCEEEE
T ss_pred             EEEcCCCcccHHHHHHHHHHHcCCCcceee
Confidence            999999999999999999999998866654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-37  Score=262.86  Aligned_cols=262  Identities=27%  Similarity=0.378  Sum_probs=203.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc-chhhhcCCCceEEEecccCCcc-----cCC--cCEEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHPRFELIRHDVTEPL-----LIE--VDQIYH  103 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~-----~~~--~d~vi~  103 (297)
                      ||+|||||||||||+++++.|++.| ++|++++|....... ....+....++.++.+|+++..     +.+  +|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQG-IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   79 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCC-CEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEE
Confidence            4799999999999999999999999 999999985422221 1222222245889999998863     224  999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCCCCCCC-----------CCCCCCC
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESY-----------WGNVNPI  170 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~-----------~~~~~~~  170 (297)
                      +||.........++...+++|+.++.+++++|++.++  +||++||.++|+.....+..|+.           .....+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~  159 (347)
T 1orr_A           80 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL  159 (347)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred             CCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCC
Confidence            9997654334557788899999999999999999886  79999999999865443321110           1111455


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCC-ChhHHHHHHHHHHcCC-----CeEEecCCceeEee
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGE-----PLTVQAPGTQTRSF  244 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  244 (297)
                      .+.+.|+.+|.++|++++.++.+.+++++++||+.+|||..... ...++..++.....+.     ++.+++++++.+++
T Consensus       160 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~  239 (347)
T 1orr_A          160 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV  239 (347)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEee
Confidence            67789999999999999999888899999999999999975432 1235666666665554     67777889999999


Q ss_pred             eeHHHHHHHHHHHHhcC--C-CccEEecCCC--cccHHHHHHHHHHhhcccCcee
Q 022414          245 CYVSDMVDGLIRLMEGE--N-TGPINIGNPG--EFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~--~-~~~~~i~~~~--~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      ++++|+|++++.+++++  . ++.||++++.  .+|+.|+++.+.+.+|.+.++.
T Consensus       240 i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (347)
T 1orr_A          240 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFT  294 (347)
T ss_dssp             EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEE
T ss_pred             EEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCce
Confidence            99999999999999852  2 4589999986  4999999999999999876554

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=1.4e-36  Score=261.75  Aligned_cols=256  Identities=18%  Similarity=0.193  Sum_probs=206.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-----C--CcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----I--EVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-----~--~~d~vi  102 (297)
                      +.+|+|+|||||||||++|++.|+++| ++|++++|+...............++.++.+|+++...     .  ++|+||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   85 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVF   85 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCC-CeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEE
Confidence            357999999999999999999999999 99999999764433222111113478899999998632     2  489999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCCC-CCCCCCCCCCCCCCCCCChHHHh
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLV-HPQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~~-~~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      |+||.........++...+++|+.++.+++++|++.+ + +|||+||..+|+.... .+.+|+     ++..+.+.|+.+
T Consensus        86 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~-----~~~~~~~~Y~~s  160 (357)
T 1rkx_A           86 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYREN-----EAMGGYDPYSNS  160 (357)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTT-----SCBCCSSHHHHH
T ss_pred             ECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCC-----CCCCCCCccHHH
Confidence            9998654333456778889999999999999999887 6 8999999999987543 345555     466677899999


Q ss_pred             HHHHHHHHHHHHHHh---------CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHH
Q 022414          180 KRVAETLMFDYHRQH---------GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (297)
Q Consensus       180 K~~~e~~~~~~~~~~---------~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  250 (297)
                      |.++|++++.+..+.         +++++++||+.+|||+... ...++..++..+..+..+.+ +++++.++++|++|+
T Consensus       161 K~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~-~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dv  238 (357)
T 1rkx_A          161 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA-LDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEP  238 (357)
T ss_dssp             HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC-SSCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc-cccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHH
Confidence            999999999987654         8999999999999998532 23578888888888887665 457788999999999


Q ss_pred             HHHHHHHHhc------CCCccEEecCC--CcccHHHHHHHHHHhhcccCce
Q 022414          251 VDGLIRLMEG------ENTGPINIGNP--GEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       251 a~~~~~~~~~------~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      |++++.++++      ..++.||++++  +.+|+.|+++.+.+.+|.+.++
T Consensus       239 a~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~  289 (357)
T 1rkx_A          239 LSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASW  289 (357)
T ss_dssp             HHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCE
T ss_pred             HHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcc
Confidence            9999998874      22779999984  5899999999999999987554

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-36  Score=259.35  Aligned_cols=253  Identities=21%  Similarity=0.198  Sum_probs=205.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc-cchhhhc------CCCceEEEecccCCccc-----C--Cc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWI------GHPRFELIRHDVTEPLL-----I--EV   98 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~------~~~~~~~~~~Dl~~~~~-----~--~~   98 (297)
                      |+|+|||||||||+++++.|+++| ++|++++|+..... +.+..+.      ...++.++.+|+++...     .  ++
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKG-YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCC-CEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            789999999999999999999999 99999999754321 1122211      12468899999988632     1  47


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC----eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~  174 (297)
                      |+|||+||.........++...+++|+.++.+++++|++.++    +||++||.++|+.....+++|+     ++..|.+
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-----~~~~~~~  178 (375)
T 1t2a_A          104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRS  178 (375)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-----SCCCCCS
T ss_pred             CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCcc-----CCCCCCC
Confidence            999999997654334567788899999999999999999885    8999999999987766677777     5667778


Q ss_pred             hHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCC-CeEEecCCceeEeeeeHHHHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      .|+.+|.++|.+++.++.+.+++++++||+.+|||+..... ...+..++..+..+. ....++++++.++++|++|+|+
T Consensus       179 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~  258 (375)
T 1t2a_A          179 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE  258 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHH
Confidence            99999999999999998888999999999999999753321 123455556666665 3345688899999999999999


Q ss_pred             HHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          253 GLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       253 ~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +++.+++++..+.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       259 a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  297 (375)
T 1t2a_A          259 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTI  297 (375)
T ss_dssp             HHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHhcCCCceEEEeCCCcccHHHHHHHHHHHhCCCc
Confidence            999999987789999999999999999999999999864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=9.3e-36  Score=255.27  Aligned_cols=256  Identities=23%  Similarity=0.238  Sum_probs=207.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc-cchhhhcCCCceEEEecccCCccc-----C--CcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLL-----I--EVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~-----~--~~d~vi  102 (297)
                      .+|+|+|||||||||+++++.|+++| ++|++++|+..... +.+.......+++++.+|+++...     .  ++|+||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKG-YEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            36899999999999999999999999 99999999764332 122222223468899999988632     2  479999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      |+||.........++...+++|+.++.+++++|.+.++  +||++||.++||.....+++|+     .+..+.+.|+.+|
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-----~~~~~~~~Y~~sK  155 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEK-----TPFYPRSPYAVAK  155 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCcc-----CCCCCCChhHHHH
Confidence            99997654444567888999999999999999998884  8999999999998766667776     5667778999999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCC-eEEecCCceeEeeeeHHHHHHHHHHHH
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~  258 (297)
                      .++|.+++.+..+.++++.++|+.++|||+..... ...+..++..+..+.. ....++++..++++|++|+|++++.++
T Consensus       156 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~  235 (345)
T 2z1m_A          156 LFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMM  235 (345)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHH
Confidence            99999999998888999999999999999854322 1233444555556643 335578888899999999999999999


Q ss_pred             hcCCCccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          259 EGENTGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       259 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      +++..+.||+++++.+++.|+++.+.+.+|.+.+
T Consensus       236 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  269 (345)
T 2z1m_A          236 QQPEPDDYVIATGETHTVREFVEKAAKIAGFDIE  269 (345)
T ss_dssp             TSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEE
T ss_pred             hCCCCceEEEeCCCCccHHHHHHHHHHHhCCCcc
Confidence            9877889999999999999999999999998643

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=2.1e-36  Score=264.21  Aligned_cols=257  Identities=23%  Similarity=0.359  Sum_probs=202.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHH-hcCCCeEEEEecCCCCC--------ccchhh----hcC---CCc---eEEEecccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNYFTGS--------KDNLRK----WIG---HPR---FELIRHDVTE   92 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~-~~g~~~v~~~~r~~~~~--------~~~~~~----~~~---~~~---~~~~~~Dl~~   92 (297)
                      +|+|||||||||||+++++.|+ ++| ++|++++|.....        .+.+..    ...   ..+   +.++.+|+++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   80 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCC-CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCC-CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence            4799999999999999999999 999 9999999875432        122211    111   124   8899999988


Q ss_pred             cc-----cC--C-cCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCC-------C
Q 022414           93 PL-----LI--E-VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL-------V  156 (297)
Q Consensus        93 ~~-----~~--~-~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~-------~  156 (297)
                      ..     ..  + +|+|||+||.........++...+++|+.++.+++++|++.++ +||++||.++|+...       .
T Consensus        81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  160 (397)
T 1gy8_A           81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA  160 (397)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence            63     22  5 9999999997654334567788999999999999999999998 899999999998765       4


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCC-------CChhHHHHHH----HH
Q 022414          157 HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI-------DDGRVVSNFI----AQ  225 (297)
Q Consensus       157 ~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~-------~~~~~~~~~~----~~  225 (297)
                      .+++|+     ++..|.+.|+.+|.++|.+++.++.+.+++++++||+++|||....       ....++..++    ..
T Consensus       161 ~~~~E~-----~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~  235 (397)
T 1gy8_A          161 EPIDIN-----AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSD  235 (397)
T ss_dssp             CCBCTT-----SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHH
T ss_pred             cCcCcc-----CCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHH
Confidence            566676     5667788999999999999999988889999999999999997421       1234555554    23


Q ss_pred             HHcCC------------CeEEec------CCceeEeeeeHHHHHHHHHHHHhcCC--C--------ccEEecCCCcccHH
Q 022414          226 AIRGE------------PLTVQA------PGTQTRSFCYVSDMVDGLIRLMEGEN--T--------GPINIGNPGEFTML  277 (297)
Q Consensus       226 ~~~~~------------~~~~~~------~~~~~~~~i~v~Dva~~~~~~~~~~~--~--------~~~~i~~~~~~s~~  277 (297)
                      +..+.            .+.+++      ++++.++++|++|+|++++.+++++.  +        +.||+++++.+|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  315 (397)
T 1gy8_A          236 IAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVR  315 (397)
T ss_dssp             HSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHH
T ss_pred             HHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHH
Confidence            34443            466666      67889999999999999999987642  3        78999999999999


Q ss_pred             HHHHHHHHhhcccCcee
Q 022414          278 ELAENVKEVNFYLGRLL  294 (297)
Q Consensus       278 e~~~~i~~~~g~~~~~~  294 (297)
                      |+++.+.+.+|.+.++.
T Consensus       316 e~~~~i~~~~g~~~~~~  332 (397)
T 1gy8_A          316 EVIEVARKTTGHPIPVR  332 (397)
T ss_dssp             HHHHHHHHHHCCCCCEE
T ss_pred             HHHHHHHHHhCCCCCee
Confidence            99999999999875543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-35  Score=256.40  Aligned_cols=255  Identities=23%  Similarity=0.246  Sum_probs=203.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhhcC-----CCceEEEecccCCccc-----C--Cc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG-----HPRFELIRHDVTEPLL-----I--EV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~-----~~~~~~~~~Dl~~~~~-----~--~~   98 (297)
                      ||+|+|||||||||+++++.|+++| ++|++++|+.... .+.+..+..     ..++.++.+|+++...     .  ++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKG-YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP   79 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            5899999999999999999999999 9999999975431 112222111     2468889999988632     1  47


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC----eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~  174 (297)
                      |+|||+||.........++...+++|+.++.+++++|++.++    +||++||.++|+.....+.+|+     ++..|.+
T Consensus        80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~-----~~~~~~~  154 (372)
T 1db3_A           80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRS  154 (372)
T ss_dssp             SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-----SCCCCCS
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCcc-----CCCCCCC
Confidence            999999997665445567788889999999999999999885    8999999999987665567777     5667788


Q ss_pred             hHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCC-eEEecCCceeEeeeeHHHHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      .|+.+|.++|.+++.+..+.++.++++|++.+|||+..... ...+..++..+..+.. ...++++++.++++|++|+|+
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~  234 (372)
T 1db3_A          155 PYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK  234 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHH
Confidence            99999999999999998888999999999999999754321 2345566666666653 445688899999999999999


Q ss_pred             HHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          253 GLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       253 ~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      +++.+++++..+.||+++++.+|+.|+++.+.+.+|.+.+
T Consensus       235 a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  274 (372)
T 1db3_A          235 MQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLR  274 (372)
T ss_dssp             HHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEE
T ss_pred             HHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCcc
Confidence            9999999877889999999999999999999999998643

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=3e-36  Score=263.84  Aligned_cols=262  Identities=25%  Similarity=0.294  Sum_probs=203.2

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc----------------cchhhh--cCCCceEEEeccc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK----------------DNLRKW--IGHPRFELIRHDV   90 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~----------------~~~~~~--~~~~~~~~~~~Dl   90 (297)
                      ...+++|||||||||||+++++.|+++| ++|++++|......                +.+...  ....++.++.+|+
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl   86 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKN-YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI   86 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence            4568999999999999999999999999 99999988532110                011110  1134788999999


Q ss_pred             CCcc-----cCC--cCEEEEccCCCCCcccccChh---hhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCC
Q 022414           91 TEPL-----LIE--VDQIYHLACPASPIFYKYNPV---KTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        91 ~~~~-----~~~--~d~vi~~a~~~~~~~~~~~~~---~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~  158 (297)
                      ++..     +.+  +|+|||+||.........++.   ..+++|+.++.+++++|++.++  +||++||.++|+... .+
T Consensus        87 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~  165 (404)
T 1i24_A           87 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-ID  165 (404)
T ss_dssp             TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SC
T ss_pred             CCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CC
Confidence            8863     223  999999999765433333443   4779999999999999999884  899999999998654 45


Q ss_pred             CCCCCCCCC---------CCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCC-------------C-
Q 022414          159 QDESYWGNV---------NPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID-------------D-  215 (297)
Q Consensus       159 ~~e~~~~~~---------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~-------------~-  215 (297)
                      ++|+.|...         .+..|.+.|+.+|.++|.+++.++.+.+++++++||+.||||+....             . 
T Consensus       166 ~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~  245 (404)
T 1i24_A          166 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAV  245 (404)
T ss_dssp             BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTT
T ss_pred             CCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccc
Confidence            555432110         24567789999999999999998888899999999999999985321             0 


Q ss_pred             -hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--C--ccEEecCCCcccHHHHHHHHHHh---h
Q 022414          216 -GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T--GPINIGNPGEFTMLELAENVKEV---N  287 (297)
Q Consensus       216 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~--~~~~i~~~~~~s~~e~~~~i~~~---~  287 (297)
                       ..++..++..+..++.+.+++++++.++++|++|+|++++.+++++.  +  +.||+++ +.+|+.|+++.+.+.   +
T Consensus       246 ~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~  324 (404)
T 1i24_A          246 FGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKL  324 (404)
T ss_dssp             TCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTT
T ss_pred             hhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhh
Confidence             24677888888889888888999999999999999999999998865  3  4899998 889999999999998   6


Q ss_pred             cccCce
Q 022414          288 FYLGRL  293 (297)
Q Consensus       288 g~~~~~  293 (297)
                      |.+.++
T Consensus       325 g~~~~~  330 (404)
T 1i24_A          325 GLDVKK  330 (404)
T ss_dssp             TCCCCE
T ss_pred             CCCccc
Confidence            766543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=7e-36  Score=257.34  Aligned_cols=248  Identities=22%  Similarity=0.292  Sum_probs=202.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC-----CcC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI-----EVD   99 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~-----~~d   99 (297)
                      .++|+|+|||||||||++|++.|+++|.++|++++|......  ....   .++. +.+|+++..     ..     ++|
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~---~~~~-~~~d~~~~~~~~~~~~~~~~~~~d  117 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL---VDLN-IADYMDKEDFLIQIMAGEEFGDVE  117 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT---TTSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc---cCce-EeeecCcHHHHHHHHhhcccCCCC
Confidence            346899999999999999999999998678999998653321  1111   1222 556665431     22     599


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHh
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      +|||+||....  ...++...+++|+.++.+++++|++.+++||++||..+|+.....+++|+     ++..|.+.|+.+
T Consensus       118 ~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~s  190 (357)
T 2x6t_A          118 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVFGYS  190 (357)
T ss_dssp             EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCCCSSG-----GGCCCSSHHHHH
T ss_pred             EEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCCcCCc-----CCCCCCChhHHH
Confidence            99999987653  44567888999999999999999998889999999999987766677777     566778899999


Q ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEecCCce-eEeeeeHHHHHHHHHH
Q 022414          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQ-TRSFCYVSDMVDGLIR  256 (297)
Q Consensus       180 K~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~~~~~  256 (297)
                      |.++|.+++.+..+.+++++++||+.+|||+.....  ..++..++..+..+..+.++++++. .+++++++|+|++++.
T Consensus       191 K~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~  270 (357)
T 2x6t_A          191 KFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLW  270 (357)
T ss_dssp             HHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHH
Confidence            999999999988777899999999999999854321  2467778888888888887788888 9999999999999999


Q ss_pred             HHhcCCCccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          257 LMEGENTGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       257 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      +++++.++.||+++++.+++.|+++.+.+.+|.+
T Consensus       271 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          271 FLENGVSGIFNLGTGRAESFQAVADATLAYHKKG  304 (357)
T ss_dssp             HHHHCCCEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             HHhcCCCCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence            9988777899999999999999999999999987

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.3e-35  Score=254.13  Aligned_cols=240  Identities=13%  Similarity=0.074  Sum_probs=190.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~  106 (297)
                      +|+|+|||||||||+++++.|+++| ++|++++|+..... .+    ...+++++.+|+++.     .+.++|+|||+|+
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~l----~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRPSSQIQ-RL----AYLEPECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECTTSCGG-GG----GGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecChHhhh-hh----ccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            4799999999999999999999999 99999999754321 11    123688999999875     3457999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCC--CCCCCCCCCCCCCCCC----CChHHHh
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV--HPQDESYWGNVNPIGV----RSCYDEG  179 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~--~~~~e~~~~~~~~~~~----~~~Y~~s  179 (297)
                      ...  ....++...+++|+.++.+++++|++.++ +|||+||.++|+....  .+ +|+     ++..|    .+.|+.+
T Consensus        87 ~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~-----~~~~p~~~~~~~Y~~s  158 (342)
T 2x4g_A           87 YYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEG-----LFYDSLPSGKSSYVLC  158 (342)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTT-----CCCSSCCTTSCHHHHH
T ss_pred             cCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCC-----CCCCccccccChHHHH
Confidence            653  23456778899999999999999999998 8999999999986543  33 565     45566    7899999


Q ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHh
Q 022414          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (297)
Q Consensus       180 K~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  259 (297)
                      |.++|.+++.++.. +++++++||+.+|||....  .. +..++..+..+....+   ++..++++|++|+|++++.+++
T Consensus       159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~--~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~  231 (342)
T 2x4g_A          159 KWALDEQAREQARN-GLPVVIGIPGMVLGELDIG--PT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALE  231 (342)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSS--CS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcc--cc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHh
Confidence            99999999998876 9999999999999997521  12 3456666677766554   5678899999999999999998


Q ss_pred             cCC-CccEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          260 GEN-TGPINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       260 ~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      ++. ++.||+++++ +|+.|+++.+.+.+|.+.++
T Consensus       232 ~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~  265 (342)
T 2x4g_A          232 RGRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQ  265 (342)
T ss_dssp             HSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCE
T ss_pred             CCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCC
Confidence            876 6799999998 99999999999999987654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=3.2e-36  Score=255.72  Aligned_cols=242  Identities=24%  Similarity=0.345  Sum_probs=196.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccC--CcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLI--EVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~--~~d~vi~~  104 (297)
                      +|+|+|||||||||+++++.|+++| ++|+++.|+.                   .+|+.+.     .+.  ++|+|||+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~~r~~-------------------~~D~~d~~~~~~~~~~~~~d~vih~   62 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLRTRD-------------------ELNLLDSRAVHDFFASERIDQVYLA   62 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCT-TEEEECCCTT-------------------TCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEecCc-------------------cCCccCHHHHHHHHHhcCCCEEEEc
Confidence            5899999999999999999999999 8998887742                   1455543     223  79999999


Q ss_pred             cCCCCC-cccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCC-ChHHHhHH
Q 022414          105 ACPASP-IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKR  181 (297)
Q Consensus       105 a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~  181 (297)
                      |+.... .....++...+++|+.++.+++++|++.++ +|||+||..+|+.....+++|+.+.. .+..|. +.|+.+|.
T Consensus        63 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK~  141 (321)
T 1e6u_A           63 AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQ-GTLEPTNEPYAIAKI  141 (321)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTS-SCCCGGGHHHHHHHH
T ss_pred             CeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCcccccc-CCCCCCCCccHHHHH
Confidence            987542 123456788899999999999999999998 89999999999876666777764321 133443 58999999


Q ss_pred             HHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHc----C-CCeEEecCCceeEeeeeHHHHHHHH
Q 022414          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIR----G-EPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       182 ~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      ++|++++.++++.+++++++||+.+|||+.....  ..++..++..+..    + ..+.++++++..++++|++|+|+++
T Consensus       142 ~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~  221 (321)
T 1e6u_A          142 AGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAAS  221 (321)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHH
Confidence            9999999998888999999999999999864321  2466777776654    3 5667778899999999999999999


Q ss_pred             HHHHhcCC----------CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          255 IRLMEGEN----------TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       255 ~~~~~~~~----------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +.+++++.          ++.||+++++.+|+.|+++.+.+.+|.+.++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  271 (321)
T 1e6u_A          222 IHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVV  271 (321)
T ss_dssp             HHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEE
T ss_pred             HHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceE
Confidence            99998765          37999999999999999999999999876543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=3.5e-35  Score=251.13  Aligned_cols=255  Identities=26%  Similarity=0.403  Sum_probs=197.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh--cCCCceEEEecccCCccc-------CCcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPLL-------IEVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~-------~~~d~vi~  103 (297)
                      |+|+||||+||||+++++.|+++| ++|++++|......+.+..+  ....++.++.+|+++...       .++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih   79 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence            689999999999999999999999 99999987543322222111  112357889999987632       25999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC-CChHHHhHH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKR  181 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~sK~  181 (297)
                      +||.........++...+++|+.++.+++++|++.++ +||++||.++|+.....+++|+     .+..| .+.|+.+|.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~-----~~~~~~~~~Y~~sK~  154 (338)
T 1udb_A           80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVES-----FPTGTPQSPYGKSKL  154 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTT-----SCCCCCSSHHHHHHH
T ss_pred             CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcc-----cCCCCCCChHHHHHH
Confidence            9987654334456778899999999999999999988 8999999999987655666666     34433 688999999


Q ss_pred             HHHHHHHHHHHHh-CCcEEEEeeccccCCCCC------CC--ChhHHHHHHHHHH-cCCCeEEec------CCceeEeee
Q 022414          182 VAETLMFDYHRQH-GIEIRIARIFNTYGPRMN------ID--DGRVVSNFIAQAI-RGEPLTVQA------PGTQTRSFC  245 (297)
Q Consensus       182 ~~e~~~~~~~~~~-~~~~~ivrp~~v~G~~~~------~~--~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i  245 (297)
                      ++|++++.++.+. +++++++||+++|||...      ..  ...++..+..... .+..+.+++      ++.+.++++
T Consensus       155 ~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  234 (338)
T 1udb_A          155 MVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYI  234 (338)
T ss_dssp             HHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEE
T ss_pred             HHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeE
Confidence            9999999988775 799999999999998421      11  1335555555444 344556554      467889999


Q ss_pred             eHHHHHHHHHHHHhcC--C--CccEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          246 YVSDMVDGLIRLMEGE--N--TGPINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~--~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      |++|+|++++.+++++  .  .++||+++++.+|+.|+++.+.+.+|.+.++
T Consensus       235 ~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~  286 (338)
T 1udb_A          235 HVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNY  286 (338)
T ss_dssp             EHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCE
T ss_pred             EHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcc
Confidence            9999999999998763  2  2589999999999999999999999976543

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=6.2e-36  Score=252.98  Aligned_cols=242  Identities=21%  Similarity=0.249  Sum_probs=194.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC--CcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi  102 (297)
                      +|+|+|||||||||+++++.|+++  | ++|++++|+....  .+.     .+++++.+|+++..     ..  ++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~--~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~vi   73 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGT-ENVIASDIRKLNT--DVV-----NSGPFEVVNALDFNQIEHLVEVHKITDIY   73 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCG-GGEEEEESCCCSC--HHH-----HSSCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCC-CEEEEEcCCCccc--ccc-----CCCceEEecCCCHHHHHHHHhhcCCCEEE
Confidence            589999999999999999999999  8 9999999965432  111     25678899998752     22  799999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCC-CCCCCCCCCCCCCCCCCChHHHhH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV-HPQDESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~-~~~~e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      |+|+.... ....++...+++|+.++.+++++|++.++ +|||+||.++|+.... .+.+|+     .+..|.+.|+.+|
T Consensus        74 h~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~~~~~~~Y~~sK  147 (312)
T 2yy7_A           74 LMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQY-----TIMEPSTVYGISK  147 (312)
T ss_dssp             ECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSS-----CBCCCCSHHHHHH
T ss_pred             ECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCcccc-----CcCCCCchhHHHH
Confidence            99986543 23456788899999999999999999998 9999999999986532 345555     5667788999999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCCh--hHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHH
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  258 (297)
                      .++|++++.+..+.+++++++||+.+|||...+...  .++...+.....+....+++++++.++++|++|+|++++.++
T Consensus       148 ~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~  227 (312)
T 2yy7_A          148 QAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIM  227 (312)
T ss_dssp             HHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHH
Confidence            999999999888889999999999999986543221  233333333444455666788889999999999999999999


Q ss_pred             hcCC-----CccEEecCCCcccHHHHHHHHHHhhc
Q 022414          259 EGEN-----TGPINIGNPGEFTMLELAENVKEVNF  288 (297)
Q Consensus       259 ~~~~-----~~~~~i~~~~~~s~~e~~~~i~~~~g  288 (297)
                      +++.     ++.||+++ +.+|+.|+++.+.+.+|
T Consensus       228 ~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~  261 (312)
T 2yy7_A          228 KAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIP  261 (312)
T ss_dssp             HSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCT
T ss_pred             hCcccccccCceEEeCC-CccCHHHHHHHHHHHCC
Confidence            8765     27899986 88999999999999998

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-36  Score=252.20  Aligned_cols=244  Identities=23%  Similarity=0.320  Sum_probs=184.8

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccC-----CcCEEEE
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLI-----EVDQIYH  103 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~-----~~d~vi~  103 (297)
                      +|+|||||||||+++++.|+++|.++|++++|......  .....   ++. +.+|+.+.     ...     ++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~   74 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFH   74 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH---TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC---cce-eccccccHHHHHHHHhccccCCCcEEEE
Confidence            58999999999999999999998678999998653321  11111   122 55666543     122     4999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (297)
                      +|+....  ...++...+++|+.++.+++++|++.++|||++||.++|+.....+++|+     ++..|.+.|+.+|.++
T Consensus        75 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~sK~~~  147 (310)
T 1eq2_A           75 EGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVYGYSKFLF  147 (310)
T ss_dssp             CCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSG-----GGCCCSSHHHHHHHHH
T ss_pred             CcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCCCC-----CCCCCCChhHHHHHHH
Confidence            9987653  45677888999999999999999998889999999999987765567776     4667788999999999


Q ss_pred             HHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEecCCce-eEeeeeHHHHHHHHHHHHhc
Q 022414          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQ-TRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       184 e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~~~~~~~~~  260 (297)
                      |.+++.+..+.+++++++||+.+|||+.....  ..++..++..+..++.+.++++++. .++++|++|+|++++.++++
T Consensus       148 e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~  227 (310)
T 1eq2_A          148 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN  227 (310)
T ss_dssp             HHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhc
Confidence            99999988777899999999999999854211  2477788888888887777788888 89999999999999999988


Q ss_pred             CCCccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          261 ENTGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       261 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      +.++.||+++++.+|+.|+++.+.+.+|.+
T Consensus       228 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          228 GVSGIFNLGTGRAESFQAVADATLAYHKKG  257 (310)
T ss_dssp             CCCEEEEESCSCCBCHHHHHHHC-------
T ss_pred             CCCCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence            777899999999999999999999999976

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=8.3e-35  Score=252.78  Aligned_cols=251  Identities=19%  Similarity=0.194  Sum_probs=202.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc-cchhhhcC-----CC-ceEEEecccCCccc-----C--Cc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIG-----HP-RFELIRHDVTEPLL-----I--EV   98 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~~-----~~-~~~~~~~Dl~~~~~-----~--~~   98 (297)
                      |+|||||||||||+++++.|+++| ++|++++|+..... +.+.....     .. ++.++.+|+++...     .  ++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKG-YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            689999999999999999999999 99999999754311 11221111     12 68899999987632     2  47


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC------eEEEEecceeecCCCCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA------RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  172 (297)
                      |+|||+||.........++...+++|+.++.+++++|.+.++      +||++||.++|+.... +++|+     ++..|
T Consensus       108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~-----~~~~~  181 (381)
T 1n7h_A          108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSET-----TPFHP  181 (381)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTT-----SCCCC
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCC-----CCCCC
Confidence            999999997654434567888899999999999999988653      8999999999987655 67776     56677


Q ss_pred             CChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCC-eEEecCCceeEeeeeHHHH
Q 022414          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDM  250 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dv  250 (297)
                      .+.|+.+|.++|.+++.+..+.++.++++|++.+|||+..... ...+..++..+..+.. ...+++++..++++|++|+
T Consensus       182 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dv  261 (381)
T 1n7h_A          182 RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY  261 (381)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHH
Confidence            8899999999999999998888999999999999999854321 1234455555666653 3455888899999999999


Q ss_pred             HHHHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          251 VDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       251 a~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      |++++.+++++..+.||+++++.+++.|+++.+.+.+|.+
T Consensus       262 a~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  301 (381)
T 1n7h_A          262 VEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLN  301 (381)
T ss_dssp             HHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCCCeEEeeCCCCCcHHHHHHHHHHHcCCC
Confidence            9999999998778999999999999999999999999975

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=8.3e-36  Score=250.73  Aligned_cols=225  Identities=19%  Similarity=0.128  Sum_probs=190.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC--CcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi~~a  105 (297)
                      |+|+|||||||||+++++.|+ +| ++|++++|+..                .+.+|+.+..     +.  ++|+|||+|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~~~d~vih~a   62 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PV-GNLIALDVHSK----------------EFCGDFSNPKGVAETVRKLRPDVIVNAA   62 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TT-SEEEEECTTCS----------------SSCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cC-CeEEEeccccc----------------cccccCCCHHHHHHHHHhcCCCEEEECc
Confidence            689999999999999999999 89 99999998541                2456776652     22  499999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      +.........++...+++|+.++.+++++|++.++||||+||.++|+.....+.+|+     ++..|.+.|+.+|.++|+
T Consensus        63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~  137 (299)
T 1n2s_A           63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQET-----DATSPLNVYGKTKLAGEK  137 (299)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTT-----SCCCCSSHHHHHHHHHHH
T ss_pred             ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCC-----CCCCCccHHHHHHHHHHH
Confidence            876544456778889999999999999999999899999999999998766677777     567778899999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC----
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE----  261 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~----  261 (297)
                      +++.+.    .+++++||+.+|||+..    .++..++..+..+..+.+.+  ++.++++|++|+|++++.+++++    
T Consensus       138 ~~~~~~----~~~~ilRp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~  207 (299)
T 1n2s_A          138 ALQDNC----PKHLIFRTSWVYAGKGN----NFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKP  207 (299)
T ss_dssp             HHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred             HHHHhC----CCeEEEeeeeecCCCcC----cHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhcccc
Confidence            987753    38999999999999742    46777777777887766654  47899999999999999999876    


Q ss_pred             -CCccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          262 -NTGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       262 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                       .++.||+++++.+|+.|+++.+.+.+|.+
T Consensus       208 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          208 EVAGLYHLVAGGTTTWHDYAALVFDEARKA  237 (299)
T ss_dssp             GGCEEEECCCBSCEEHHHHHHHHHHHHHHH
T ss_pred             ccCceEEEeCCCCCCHHHHHHHHHHHhCCC
Confidence             26799999999999999999999999987

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-35  Score=246.90  Aligned_cols=226  Identities=22%  Similarity=0.255  Sum_probs=189.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC--CcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi~~  104 (297)
                      .|+|||||||||||+++++.|+++| ++|++++|+                    .+|+++..     +.  ++|+|||+
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~~~d~vih~   70 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKN-VEVIPTDVQ--------------------DLDITNVLAVNKFFNEKKPNVVINC   70 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTT--------------------TCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCC-CeEEeccCc--------------------cCCCCCHHHHHHHHHhcCCCEEEEC
Confidence            5999999999999999999999999 999999984                    14555431     22  69999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      ||.........++...+++|+.++.+++++|++.++|||++||.++|+.....+++|+     ++..|.+.|+.+|.++|
T Consensus        71 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~E  145 (292)
T 1vl0_A           71 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF-----DEVNPQSAYGKTKLEGE  145 (292)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTT-----SCCCCCSHHHHHHHHHH
T ss_pred             CccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCCCCC-----CCCCCccHHHHHHHHHH
Confidence            9976543345678889999999999999999998889999999999987766677777     56677789999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCc
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG  264 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~  264 (297)
                      .+++.+.    .+++++||+.+|||.     ..++..++.....+..+.+.+  ++.+++++++|+|++++.+++++.++
T Consensus       146 ~~~~~~~----~~~~~lR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~  214 (292)
T 1vl0_A          146 NFVKALN----PKYYIVRTAWLYGDG-----NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNYG  214 (292)
T ss_dssp             HHHHHHC----SSEEEEEECSEESSS-----SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCCE
T ss_pred             HHHHhhC----CCeEEEeeeeeeCCC-----cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcCCCc
Confidence            9987753    468999999999983     246667777777777666554  57889999999999999999887678


Q ss_pred             cEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          265 PINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       265 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      .||+++++.+|+.|+++.+.+.+|.+.++.
T Consensus       215 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  244 (292)
T 1vl0_A          215 TFHCTCKGICSWYDFAVEIFRLTGIDVKVT  244 (292)
T ss_dssp             EEECCCBSCEEHHHHHHHHHHHHCCCCEEE
T ss_pred             EEEecCCCCccHHHHHHHHHHHhCCCCcee
Confidence            999999999999999999999999876543

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=8.7e-35  Score=247.85  Aligned_cols=237  Identities=27%  Similarity=0.402  Sum_probs=191.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC--CcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi  102 (297)
                      ..+|+|+|||||||||+++++.|+++| ++|++++|+.....+....+   .++.++.+|+++..     ..  ++|+||
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~l---~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi   93 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQG-HEILVIDNFATGKREVLPPV---AGLSVIEGSVTDAGLLERAFDSFKPTHVV   93 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEECCSSSCGGGSCSC---TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCccchhhhhcc---CCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence            447999999999999999999999999 99999999654332111111   47889999998863     23  899999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCC--CCCCCCCCCCCCCCCCChHHHh
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVH--PQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~--~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      |+||..... ...++.  +++|+.++.+++++|.+.++ +||++||.++|+.....  +++|+     +  .+.+.|+.+
T Consensus        94 h~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~-----~--~~~~~Y~~s  163 (330)
T 2pzm_A           94 HSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSP-----T--APFTSYGIS  163 (330)
T ss_dssp             ECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCC-----C--CCCSHHHHH
T ss_pred             ECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCC-----C--CCCChHHHH
Confidence            999976532 222333  89999999999999999998 99999999999865433  66666     2  456789999


Q ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHH-HHHHHH
Q 022414          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD-GLIRLM  258 (297)
Q Consensus       180 K~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~-~~~~~~  258 (297)
                      |.++|.+++.+    +++++++||+++|||+.   ...++..++..+..+.  .+++++. .+++++++|+|+ +++.++
T Consensus       164 K~~~e~~~~~~----~~~~~~iR~~~v~gp~~---~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~  233 (330)
T 2pzm_A          164 KTAGEAFLMMS----DVPVVSLRLANVTGPRL---AIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQ  233 (330)
T ss_dssp             HHHHHHHHHTC----SSCEEEEEECEEECTTC---CSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHc----CCCEEEEeeeeeECcCC---CCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHh
Confidence            99999998765    78999999999999984   2346666677666665  3345556 789999999999 999999


Q ss_pred             hcCCCccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          259 EGENTGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       259 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      +++.++.||+++++.+++.|+++.+.+.+|.+
T Consensus       234 ~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          234 EGRPTGVFNVSTGEGHSIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             TTCCCEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             hcCCCCEEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence            87656799999999999999999999999987

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=8.6e-35  Score=248.16  Aligned_cols=234  Identities=23%  Similarity=0.371  Sum_probs=188.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCC--cCEEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIE--VDQIYH  103 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~--~d~vi~  103 (297)
                      .+|+|+|||||||||+++++.|+++| ++|++++|......+.+..   ..++.++.+|+++..     +.+  +|+|||
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih   95 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNFATGRREHLKD---HPNLTFVEGSIADHALVNQLIGDLQPDAVVH   95 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGSCC---CTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECCCccchhhHhh---cCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence            47899999999999999999999999 9999999975433222221   147889999999863     224  999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeec----CCCCCCCCCCCCCCCCCCCCC-ChHH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYG----DPLVHPQDESYWGNVNPIGVR-SCYD  177 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~----~~~~~~~~e~~~~~~~~~~~~-~~Y~  177 (297)
                      +||..... ...++.  +++|+.++.+++++|.+.++ +||++||..+|+    .... +++|+     +  .|. +.|+
T Consensus        96 ~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~-----~--~p~~~~Y~  164 (333)
T 2q1w_A           96 TAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHP-----R--NPANSSYA  164 (333)
T ss_dssp             CCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSC-----C--CCTTCHHH
T ss_pred             CceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCC-----C--CCCCCchH
Confidence            99976542 222333  89999999999999999998 999999999998    4433 66666     2  455 7899


Q ss_pred             HhHHHHHHHHHH-HHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHH
Q 022414          178 EGKRVAETLMFD-YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       178 ~sK~~~e~~~~~-~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      .+|.++|.+++. +.     +++++||+.+|||+.   ...+++.++..+..+.  .+++ ++..+++++++|+|++++.
T Consensus       165 ~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~---~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~  233 (333)
T 2q1w_A          165 ISKSANEDYLEYSGL-----DFVTFRLANVVGPRN---VSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVR  233 (333)
T ss_dssp             HHHHHHHHHHHHHTC-----CEEEEEESEEESTTC---CSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhC-----CeEEEeeceEECcCC---cCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHH
Confidence            999999999876 54     789999999999982   2346677777776665  3335 6778899999999999999


Q ss_pred             HHhcCCCccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          257 LMEGENTGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       257 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      +++++.++.||+++++.+++.|+++.+.+.+|.+
T Consensus       234 ~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          234 AVDGVGHGAYHFSSGTDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             HHTTCCCEEEECSCSCCEEHHHHHHHHHHHTTCS
T ss_pred             HHhcCCCCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence            9987766799999999999999999999999987

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=5.9e-35  Score=244.01  Aligned_cols=224  Identities=17%  Similarity=0.112  Sum_probs=184.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~  110 (297)
                      ++|+|+|||| ||||++|++.|+++| ++|++++|+....    .. +...+++++.+|+.+....++|+|||+|+....
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g-~~V~~~~r~~~~~----~~-~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~   76 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQG-WRIIGTSRNPDQM----EA-IRASGAEPLLWPGEEPSLDGVTHLLISTAPDSG   76 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGT-CEEEEEESCGGGH----HH-HHHTTEEEEESSSSCCCCTTCCEEEECCCCBTT
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCC-CEEEEEEcChhhh----hh-HhhCCCeEEEecccccccCCCCEEEECCCcccc
Confidence            3589999998 999999999999999 9999999964321    11 112578999999988667789999999986542


Q ss_pred             cccccChhhhHHHhHHHHHHHHHHHHH--cCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHH
Q 022414          111 IFYKYNPVKTIKTNVIGTLNMLGLAKR--VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM  187 (297)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~  187 (297)
                      .    +         ..+.++++++++  .++ +|||+||.++|+.....+++|+     ++..|.+.|+.+|.++|+++
T Consensus        77 ~----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~~  138 (286)
T 3ius_A           77 G----D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDET-----TPLTPTAARGRWRVMAEQQW  138 (286)
T ss_dssp             B----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTT-----SCCCCCSHHHHHHHHHHHHH
T ss_pred             c----c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCC-----CCCCCCCHHHHHHHHHHHHH
Confidence            1    1         135788999988  676 8999999999998877777887     67778899999999999999


Q ss_pred             HHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-CccE
Q 022414          188 FDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPI  266 (297)
Q Consensus       188 ~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~  266 (297)
                      +.+   .+++++++||+.+|||+...         +..+..+....+.+. .+.++++|++|+|++++.+++++. ++.|
T Consensus       139 ~~~---~~~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~g~~~  205 (286)
T 3ius_A          139 QAV---PNLPLHVFRLAGIYGPGRGP---------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDPGAVY  205 (286)
T ss_dssp             HHS---TTCCEEEEEECEEEBTTBSS---------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCTTCEE
T ss_pred             Hhh---cCCCEEEEeccceECCCchH---------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCCCCCEE
Confidence            876   58999999999999998533         223445666666554 578899999999999999999987 5699


Q ss_pred             EecCCCcccHHHHHHHHHHhhcccCc
Q 022414          267 NIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       267 ~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      |+++++.+|+.|+++.+.+.+|.+..
T Consensus       206 ~i~~~~~~s~~e~~~~i~~~~g~~~~  231 (286)
T 3ius_A          206 NVCDDEPVPPQDVIAYAAELQGLPLP  231 (286)
T ss_dssp             EECCSCCBCHHHHHHHHHHHHTCCCC
T ss_pred             EEeCCCCccHHHHHHHHHHHcCCCCC
Confidence            99999999999999999999998754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.4e-34  Score=245.10  Aligned_cols=234  Identities=19%  Similarity=0.210  Sum_probs=167.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-----C--CcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----I--EVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-----~--~~d~vi~~  104 (297)
                      +|+|+|||||||||+++++.|+++| ++|++++|+...           .+  ++.+|+++...     .  ++|+|||+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-----------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~   67 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCGFRRAR-----------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHC   67 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC-------------------------------CHHHHHHHCCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEccCCCC-----------CC--eEEecCCCHHHHHHHHHhhCCCEEEEC
Confidence            5899999999999999999999999 999999985422           12  66788877532     1  48999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      ||.........++...+++|+.++.+++++|.+.++++||+||..+|+. ...+++|+     ++..|.+.|+.+|.++|
T Consensus        68 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~-~~~~~~E~-----~~~~~~~~Y~~sK~~~e  141 (315)
T 2ydy_A           68 AAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG-TNPPYREE-----DIPAPLNLYGKTKLDGE  141 (315)
T ss_dssp             C-------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS-SSCSBCTT-----SCCCCCSHHHHHHHHHH
T ss_pred             CcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC-CCCCCCCC-----CCCCCcCHHHHHHHHHH
Confidence            9976544445677888999999999999999998889999999999987 45567776     56677889999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHH-cCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC--
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAI-RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE--  261 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--  261 (297)
                      ++++.+    +++++++||+.|||+..... ..++..++.... .+..+.+.  +++.++++|++|+|++++.+++++  
T Consensus       142 ~~~~~~----~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~  214 (315)
T 2ydy_A          142 KAVLEN----NLGAAVLRIPILYGEVEKLE-ESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRML  214 (315)
T ss_dssp             HHHHHH----CTTCEEEEECSEECSCSSGG-GSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHh----CCCeEEEeeeeeeCCCCccc-ccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhcc
Confidence            998765    56789999999999985421 134445556666 66666553  467789999999999999998763  


Q ss_pred             ---CCccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          262 ---NTGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       262 ---~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                         .++.||+++++.+++.|+++.+.+.+|.+..
T Consensus       215 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  248 (315)
T 2ydy_A          215 DPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSS  248 (315)
T ss_dssp             CTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCT
T ss_pred             ccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChh
Confidence               3779999999999999999999999998754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=6.6e-34  Score=243.59  Aligned_cols=252  Identities=19%  Similarity=0.226  Sum_probs=204.3

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCC------CeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----c-
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEK------NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----L-   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~-   95 (297)
                      +..++|+|+||||+||||+++++.|+++|.      ++|++++|+......     ....++.++.+|+++..     . 
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----ccCCceeEEEcCCCCHHHHHHHHh
Confidence            345679999999999999999999999984      589999986533221     11246888999999863     2 


Q ss_pred             CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-----C-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-----A-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      .++|+|||+||.... ....++...+++|+.++.+++++|++.+     + +||++||..+|+.....+++|+     ++
T Consensus        85 ~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-----~~  158 (342)
T 2hrz_A           85 ARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE-----FH  158 (342)
T ss_dssp             TCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT-----CC
T ss_pred             cCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC-----CC
Confidence            379999999986532 2345678889999999999999998876     5 8999999999987655667777     56


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccC-CCCCCCC-hhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG-PRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      ..|.+.|+.+|.++|.+++.+..+.+++..++|++.+|| |+..... ..++..++.....+....+...++...+++|+
T Consensus       159 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  238 (342)
T 2hrz_A          159 TTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASP  238 (342)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEeh
Confidence            677889999999999999998887789999999999998 6542221 34677788888888877666666777889999


Q ss_pred             HHHHHHHHHHHhcC-----CCccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          248 SDMVDGLIRLMEGE-----NTGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       248 ~Dva~~~~~~~~~~-----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +|+|++++.+++.+     .++.||++ ++.+|+.|+++.+.+.+|.+.
T Consensus       239 ~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~  286 (342)
T 2hrz_A          239 RSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKA  286 (342)
T ss_dssp             HHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCccc
Confidence            99999999999876     35689995 578999999999999999764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=3.8e-35  Score=245.17  Aligned_cols=226  Identities=18%  Similarity=0.138  Sum_probs=183.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-----CC-cCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IE-VDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-----~~-~d~vi~~  104 (297)
                      ++|+|+||| +||||++|++.|+++| ++|++++|+....         ..+++++.+|+++...     .+ +|+|||+
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g-~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~   70 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQG-HEVTGLRRSAQPM---------PAGVQTLIADVTRPDTLASIVHLRPEILVYC   70 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTT-CCEEEEECTTSCC---------CTTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCC-CEEEEEeCCcccc---------ccCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence            368999999 5999999999999999 9999999965431         2578899999987632     24 9999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (297)
                      |+..     ..++...+++|+.++.+++++|++.++ +|||+||.++|+.....+++|+     ++..|.+.|+.+|.++
T Consensus        71 a~~~-----~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~  140 (286)
T 3gpi_A           71 VAAS-----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDED-----TPPIAKDFSGKRMLEA  140 (286)
T ss_dssp             HHHH-----HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTT-----SCCCCCSHHHHHHHHH
T ss_pred             CCCC-----CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCC-----CCCCCCChhhHHHHHH
Confidence            9753     245667788999999999999999998 8999999999998877777787     6777889999999999


Q ss_pred             HHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC--
Q 022414          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE--  261 (297)
Q Consensus       184 e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--  261 (297)
                      |++ +.+     ++++++||+.+|||+..    .    ++..+.. +..  .++++..++++|++|+|++++.+++++  
T Consensus       141 E~~-~~~-----~~~~ilR~~~v~G~~~~----~----~~~~~~~-~~~--~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  203 (286)
T 3gpi_A          141 EAL-LAA-----YSSTILRFSGIYGPGRL----R----MIRQAQT-PEQ--WPARNAWTNRIHRDDGAAFIAYLIQQRSH  203 (286)
T ss_dssp             HHH-GGG-----SSEEEEEECEEEBTTBC----H----HHHHTTC-GGG--SCSSBCEECEEEHHHHHHHHHHHHHHHTT
T ss_pred             HHH-Hhc-----CCeEEEecccccCCCch----h----HHHHHHh-ccc--CCCcCceeEEEEHHHHHHHHHHHHhhhcc
Confidence            998 553     89999999999999842    2    3333333 221  367788999999999999999999983  


Q ss_pred             -C-CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          262 -N-TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       262 -~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                       . ++.||+++++.+|+.|+++.+.+.+|.+..+.
T Consensus       204 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~  238 (286)
T 3gpi_A          204 AVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAG  238 (286)
T ss_dssp             SCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCS
T ss_pred             CCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCC
Confidence             3 78999999999999999999999999876543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=2.9e-34  Score=265.44  Aligned_cols=257  Identities=28%  Similarity=0.469  Sum_probs=209.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi  102 (297)
                      ..+|+|+|||||||||++++++|+++ | ++|++++|+.....    ......+++++.+|+++..      ..++|+||
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g-~~V~~~~r~~~~~~----~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vi  387 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDH-YEVYGLDIGSDAIS----RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVL  387 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSS-EEEEEEESCCTTTG----GGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCC-CEEEEEEcCchhhh----hhccCCceEEEECCCCCcHHHHHHhhcCCCEEE
Confidence            35789999999999999999999998 8 99999999754322    2223357899999998752      23699999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCC-CC-CCCCChHHHhH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNV-NP-IGVRSCYDEGK  180 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~-~~~~~~Y~~sK  180 (297)
                      |+||.........++.+.+++|+.++.+++++|++.+.||||+||.++|+.....+++|+.+... .+ ..|.+.|+.+|
T Consensus       388 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK  467 (660)
T 1z7e_A          388 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  467 (660)
T ss_dssp             ECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             ECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHH
Confidence            99997665444567788899999999999999999888899999999998776666777643110 11 14556899999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCC------CChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHH
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      .++|++++.++.+.+++++++||+++|||....      ....++..++..+..+.++.+++++++.++++|++|+|+++
T Consensus       468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai  547 (660)
T 1z7e_A          468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHH
Confidence            999999999988889999999999999998532      11346777888888888888888888999999999999999


Q ss_pred             HHHHhcCC----CccEEecCCC-cccHHHHHHHHHHhhcccC
Q 022414          255 IRLMEGEN----TGPINIGNPG-EFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       255 ~~~~~~~~----~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~  291 (297)
                      +.+++++.    ++.||+++++ .+|+.|+++.+.+.+|.+.
T Consensus       548 ~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~  589 (660)
T 1z7e_A          548 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  589 (660)
T ss_dssp             HHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCT
T ss_pred             HHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCC
Confidence            99998753    5689999986 8999999999999998753

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.8e-34  Score=242.48  Aligned_cols=232  Identities=19%  Similarity=0.153  Sum_probs=184.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIF  112 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~~  112 (297)
                      |||||||||||||++|++.|+++| ++|++++|++...           .+.+  -++....+.++|+|||+|+......
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~R~~~~~-----------~~~~--~~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVSRKPGPG-----------RITW--DELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCTT-----------EEEH--HHHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCCcC-----------eeec--chhhHhhccCCCEEEEeccCcccch
Confidence            899999999999999999999999 9999999964221           1111  1222234568999999998532211


Q ss_pred             ----cccChhhhHHHhHHHHHHHHHHHHHcCC---eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          113 ----YKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       113 ----~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                          .......++..|+.++.++++++++.+.   +||+.||.++|+.....+.+|+     ++..+...|+..+...|.
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~-----~p~~~~~~~~~~~~~~e~  141 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDED-----SPGGDFDFFSNLVTKWEA  141 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTT-----CCCSCSSHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCccccc-----CCccccchhHHHHHHHHH
Confidence                1233456788999999999999999876   4899999999999888888888     677777888888887776


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-Cc
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TG  264 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~  264 (297)
                      ...  ....+++++++||+.||||+     ...+..+......+... ..+++++.++|+|++|+|+++..+++++. .|
T Consensus       142 ~~~--~~~~~~~~~~~r~~~v~g~~-----~~~~~~~~~~~~~~~~~-~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g  213 (298)
T 4b4o_A          142 AAR--LPGDSTRQVVVRSGVVLGRG-----GGAMGHMLLPFRLGLGG-PIGSGHQFFPWIHIGDLAGILTHALEANHVHG  213 (298)
T ss_dssp             HHC--CSSSSSEEEEEEECEEECTT-----SHHHHHHHHHHHTTCCC-CBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCE
T ss_pred             HHH--hhccCCceeeeeeeeEEcCC-----CCchhHHHHHHhcCCcc-eecccCceeecCcHHHHHHHHHHHHhCCCCCC
Confidence            432  23457899999999999997     34556666655555544 34899999999999999999999999887 88


Q ss_pred             cEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          265 PINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       265 ~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +||+++++++|+.|+++.+.+.+|.+.
T Consensus       214 ~yn~~~~~~~t~~e~~~~ia~~lgrp~  240 (298)
T 4b4o_A          214 VLNGVAPSSATNAEFAQTFGAALGRRA  240 (298)
T ss_dssp             EEEESCSCCCBHHHHHHHHHHHHTCCC
T ss_pred             eEEEECCCccCHHHHHHHHHHHhCcCC
Confidence            999999999999999999999999753

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=3.1e-34  Score=245.50  Aligned_cols=255  Identities=20%  Similarity=0.188  Sum_probs=197.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEE-ecccCCcc-----cCCcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELI-RHDVTEPL-----LIEVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~-~~Dl~~~~-----~~~~d~  100 (297)
                      +++|+||||||+||||+++++.|+++| ++|++++|+.... +.+...+   ...+++++ .+|+++..     ..++|+
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHG-YKVRGTARSASKL-ANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHH-HHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCcccH-HHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            457999999999999999999999999 9999999964321 1111111   11468888 79998753     337999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHH-cCC-eEEEEecceeecCCCC----CCCCCCCCCC--------
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR-VGA-RILLTSTSEVYGDPLV----HPQDESYWGN--------  166 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~-r~v~~Ss~~~~~~~~~----~~~~e~~~~~--------  166 (297)
                      |||+||....   ..++...+++|+.++.+++++|.+ .++ |||++||.++|+....    .+++|+.|..        
T Consensus        87 vih~A~~~~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           87 VAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             EEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             EEEeCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence            9999987643   246778899999999999999985 566 8999999999864322    4566764321        


Q ss_pred             ---CCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCCh-hHHHHHHHHHHcCCCeEEecCCce
Q 022414          167 ---VNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDG-RVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       167 ---~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                         ..+..|.+.|+.+|.++|.+++.+..+.  +++++++||+++|||....... ..+..++..+..++...+.+++ +
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  242 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-P  242 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-C
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-C
Confidence               0123456789999999999999988775  6889999999999998654322 2677788888888776555554 6


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      .++++|++|+|++++.+++++. .|.+++.+++.+|+.|+++.+.+.+|.+
T Consensus       243 ~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          243 PQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             SEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS
T ss_pred             cCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc
Confidence            7899999999999999998765 5655566678899999999999999874

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.2e-34  Score=253.71  Aligned_cols=256  Identities=18%  Similarity=0.154  Sum_probs=196.9

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhc---CCCeEEEEecCCCCCc--cchhhhcC--------------CCceEEEec
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMEN---EKNEVIVVDNYFTGSK--DNLRKWIG--------------HPRFELIRH   88 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~---g~~~v~~~~r~~~~~~--~~~~~~~~--------------~~~~~~~~~   88 (297)
                      ....+|+|+|||||||||++++++|++.   | ++|++++|+.....  +.+...+.              ..++.++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g-~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVD-GRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTT-CEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCC-CEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            3446899999999999999999999999   8 99999999754221  11111121              258999999


Q ss_pred             ccCCcc-----------cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCC
Q 022414           89 DVTEPL-----------LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV  156 (297)
Q Consensus        89 Dl~~~~-----------~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~  156 (297)
                      |+++..           ..++|+|||+||....    .++.+.+++|+.++.+++++|++.++ +|||+||.++|+....
T Consensus       148 Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~  223 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEP  223 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCT
T ss_pred             ECCCcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCC
Confidence            998543           2369999999997653    56677889999999999999999998 8999999999988766


Q ss_pred             CCCCCCCCCCCCCCCC-----------CChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCC---CChhHHHHH
Q 022414          157 HPQDESYWGNVNPIGV-----------RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI---DDGRVVSNF  222 (297)
Q Consensus       157 ~~~~e~~~~~~~~~~~-----------~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~---~~~~~~~~~  222 (297)
                      .+++|+.     +..|           .+.|+.+|.++|.+++.+..+.+++++++||++|||+....   ....++..+
T Consensus       224 ~~~~E~~-----~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l  298 (478)
T 4dqv_A          224 SAFTEDA-----DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRM  298 (478)
T ss_dssp             TTCCSSS-----CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHH
T ss_pred             CCcCCcc-----cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHH
Confidence            6777763     2222           24499999999999999988789999999999999985411   123466666


Q ss_pred             HHHHHcCCCeEE--ec---C---CceeEeeeeHHHHHHHHHHHHhc----CC--CccEEecCCCc--ccHHHHHHHHHHh
Q 022414          223 IAQAIRGEPLTV--QA---P---GTQTRSFCYVSDMVDGLIRLMEG----EN--TGPINIGNPGE--FTMLELAENVKEV  286 (297)
Q Consensus       223 ~~~~~~~~~~~~--~~---~---~~~~~~~i~v~Dva~~~~~~~~~----~~--~~~~~i~~~~~--~s~~e~~~~i~~~  286 (297)
                      +.........+.  ..   +   ++..++++|++|+|++++.++.+    +.  +++||+++++.  +++.|+++.+.+.
T Consensus       299 ~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~  378 (478)
T 4dqv_A          299 VLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA  378 (478)
T ss_dssp             HHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred             HHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence            665554332221  11   1   25778999999999999999875    22  67999999988  9999999999995


Q ss_pred             hcccCcee
Q 022414          287 NFYLGRLL  294 (297)
Q Consensus       287 ~g~~~~~~  294 (297)
                       |.+.+.+
T Consensus       379 -g~~~~~i  385 (478)
T 4dqv_A          379 -GYPIRRI  385 (478)
T ss_dssp             -TCSCEEE
T ss_pred             -CCCcccC
Confidence             7665433

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=1.8e-33  Score=238.36  Aligned_cols=237  Identities=25%  Similarity=0.301  Sum_probs=190.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHhc--CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC--CcCEEEEc
Q 022414           34 RILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIYHL  104 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi~~  104 (297)
                      +|+|||||||||+++++.|+++  | ++|++++|+.....          ++.++.+|+++..     ..  ++|+|||+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~----------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~   69 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGK-KNVIASDIVQRDTG----------GIKFITLDVSNRDEIDRAVEKYSIDAIFHL   69 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCG-GGEEEEESSCCCCT----------TCCEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCC-CEEEEecCCCcccc----------CceEEEecCCCHHHHHHHHhhcCCcEEEEC
Confidence            5899999999999999999998  7 89999988643211          4668889998762     22  79999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCC-CCCCCCCCCCCCCCCCCCChHHHhHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL-VHPQDESYWGNVNPIGVRSCYDEGKRV  182 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~-~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (297)
                      |+.... ....++...+++|+.++.+++++|++.++ +||++||..+|+... ..+.+|+     ++..|.+.|+.+|.+
T Consensus        70 a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~~~p~~~Y~~sK~~  143 (317)
T 3ajr_A           70 AGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSI-----TITRPRTMFGVTKIA  143 (317)
T ss_dssp             CCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSS-----SCCCCCSHHHHHHHH
T ss_pred             CcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCcccc-----ccCCCCchHHHHHHH
Confidence            986532 23456778899999999999999999998 899999999998653 2344455     566778899999999


Q ss_pred             HHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhc
Q 022414          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       183 ~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                      +|.+++.+..+.+++++++||+.+||+...+..  ..++...+.....+..+..+++++..++++|++|+|++++.++++
T Consensus       144 ~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  223 (317)
T 3ajr_A          144 AELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEA  223 (317)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhC
Confidence            999999988888999999999999997643321  123333344445555666677888899999999999999999987


Q ss_pred             CC-----CccEEecCCCcccHHHHHHHHHHhhc
Q 022414          261 EN-----TGPINIGNPGEFTMLELAENVKEVNF  288 (297)
Q Consensus       261 ~~-----~~~~~i~~~~~~s~~e~~~~i~~~~g  288 (297)
                      +.     ++.||+++ +.+|+.|+++.+.+.+|
T Consensus       224 ~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~  255 (317)
T 3ajr_A          224 DRDKLVLRNGYNVTA-YTFTPSELYSKIKERIP  255 (317)
T ss_dssp             CGGGCSSCSCEECCS-EEECHHHHHHHHHTTCC
T ss_pred             CccccccCceEecCC-ccccHHHHHHHHHHHCC
Confidence            64     37899986 68999999999999988

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=8.1e-33  Score=257.65  Aligned_cols=258  Identities=24%  Similarity=0.363  Sum_probs=197.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh--cCCCceEEEecccCCcc-----cC--CcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPL-----LI--EVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~-----~~--~~d~  100 (297)
                      .++|+|+||||+||||+++++.|+++| ++|++++|......+....+  +...++.++.+|+++..     +.  ++|+
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENG-YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            457999999999999999999999999 99999998754332221111  11346888999998762     22  7999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCC----CCCCCCCCCCCCCCCCCCCh
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL----VHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~----~~~~~e~~~~~~~~~~~~~~  175 (297)
                      |||+||..........+.+.+++|+.++.+++++|++.++ +||++||.++|+...    ..+.+|+     .+..|.+.
T Consensus        88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~-----~~~~p~~~  162 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEE-----CPLGPTNP  162 (699)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTT-----SCCCCCSH
T ss_pred             EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCcccc-----CCCCCCCh
Confidence            9999997654334456677899999999999999999998 899999999997542    1345555     46667789


Q ss_pred             HHHhHHHHHHHHHHHHHH--hCCcEEEEeeccccCCCCCC----C----ChhHHHHHHHHHHc-CCCeEEec------CC
Q 022414          176 YDEGKRVAETLMFDYHRQ--HGIEIRIARIFNTYGPRMNI----D----DGRVVSNFIAQAIR-GEPLTVQA------PG  238 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~--~~~~~~ivrp~~v~G~~~~~----~----~~~~~~~~~~~~~~-~~~~~~~~------~~  238 (297)
                      |+.+|.++|++++.+..+  .+++++++||+.+|||....    .    ...++..+...... +.++.+++      ++
T Consensus       163 Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  242 (699)
T 1z45_A          163 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG  242 (699)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCC
Confidence            999999999999998776  68999999999999986321    0    12355544443332 23455545      57


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcC------C--CccEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGE------N--TGPINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~------~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      ++.++++|++|+|++++.++++.      .  .+.||+++++.+|+.|+++.+.+.+|.+.++
T Consensus       243 ~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~  305 (699)
T 1z45_A          243 TPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY  305 (699)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC
T ss_pred             CeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCc
Confidence            88999999999999999988742      1  4689999999999999999999999987543

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=5.6e-33  Score=249.77  Aligned_cols=233  Identities=19%  Similarity=0.139  Sum_probs=178.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCC---cccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE---PLLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~d~vi~~a~~~  108 (297)
                      +|+|||||||||||++|++.|+++| ++|++++|+.....             .+.+|+.+   ..+.++|+|||+|+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R~~~~~~-------------~v~~d~~~~~~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQLVRKEPKPG-------------KRFWDPLNPASDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSSCCTT-------------CEECCTTSCCTTTTTTCSEEEECCCC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCCCcc-------------ceeecccchhHHhcCCCCEEEECCCCc
Confidence            7899999999999999999999999 99999999754321             13445543   3456899999999875


Q ss_pred             CCcc-cccChhhhHHHhHHHHHHHHHH-HHHcCC-eEEEEecceeec-CCCCCCCCCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          109 SPIF-YKYNPVKTIKTNVIGTLNMLGL-AKRVGA-RILLTSTSEVYG-DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       109 ~~~~-~~~~~~~~~~~n~~~~~~l~~~-~~~~~~-r~v~~Ss~~~~~-~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      .... ...++...+++|+.++.+++++ +++.++ +|||+||.++|+ .....+++|+     .+. +.+.|+.+|...|
T Consensus       213 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~-----~~~-~~~~y~~~~~~~E  286 (516)
T 3oh8_A          213 IFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEE-----SES-GDDFLAEVCRDWE  286 (516)
T ss_dssp             ----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTT-----SCC-CSSHHHHHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCC-----CCC-CcChHHHHHHHHH
Confidence            4322 3455677889999999999999 566677 899999999998 4444566676     333 6688999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-C
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-T  263 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~  263 (297)
                      ..+... ...+++++++||+.+|||+     ..++..+...+..+... ..+++++.++++|++|+|++++.+++++. .
T Consensus       287 ~~~~~~-~~~gi~~~ilRp~~v~Gp~-----~~~~~~~~~~~~~g~~~-~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~  359 (516)
T 3oh8_A          287 HATAPA-SDAGKRVAFIRTGVALSGR-----GGMLPLLKTLFSTGLGG-KFGDGTSWFSWIAIDDLTDIYYRAIVDAQIS  359 (516)
T ss_dssp             HTTHHH-HHTTCEEEEEEECEEEBTT-----BSHHHHHHHTTC---CC-CCTTSCCEECEEEHHHHHHHHHHHHHCTTCC
T ss_pred             HHHHHH-HhCCCCEEEEEeeEEECCC-----CChHHHHHHHHHhCCCc-ccCCCCceEceEeHHHHHHHHHHHHhCcccC
Confidence            876544 4568999999999999997     23555555554444433 45888999999999999999999999876 7


Q ss_pred             ccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          264 GPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       264 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      |.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       360 g~~ni~~~~~~s~~el~~~i~~~~g~~~  387 (516)
T 3oh8_A          360 GPINAVAPNPVSNADMTKILATSMHRPA  387 (516)
T ss_dssp             EEEEESCSCCEEHHHHHHHTTC------
T ss_pred             CcEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence            8999999999999999999999998764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=1.7e-32  Score=234.66  Aligned_cols=233  Identities=21%  Similarity=0.285  Sum_probs=188.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYH  103 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~  103 (297)
                      ..+|+|+||||||+||+++++.|++. |.++|++++|+.... +.+...+...++.++.+|++|..     +.++|+|||
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQ-SEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHH-HHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhH-HHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            45799999999999999999999999 933999999964322 12222233357899999999862     458999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (297)
                      +||.........++.+.+++|+.++.+++++|.+.++ +||++||...+                   .|.+.|+.+|.+
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~-------------------~p~~~Y~~sK~~  158 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA-------------------NPINLYGATKLC  158 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS-------------------SCCSHHHHHHHH
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC-------------------CCccHHHHHHHH
Confidence            9997654334566788999999999999999999998 89999997653                   234679999999


Q ss_pred             HHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCC-CeEEecCCceeEeeeeHHHHHHHHHHHH
Q 022414          183 AETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (297)
Q Consensus       183 ~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~~  258 (297)
                      +|.+++.+..+   .+++++++||+++||+.     .++++.+...+..++ ++.+ .+++..+++++++|+|++++.++
T Consensus       159 ~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~-----~~~i~~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~~v~~~l  232 (344)
T 2gn4_A          159 SDKLFVSANNFKGSSQTQFSVVRYGNVVGSR-----GSVVPFFKKLVQNKASEIPI-TDIRMTRFWITLDEGVSFVLKSL  232 (344)
T ss_dssp             HHHHHHHGGGCCCSSCCEEEEECCCEETTCT-----TSHHHHHHHHHHHTCCCEEE-SCTTCEEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcEEEEEEeccEECCC-----CCHHHHHHHHHHcCCCceEE-eCCCeEEeeEEHHHHHHHHHHHH
Confidence            99999887653   47999999999999987     346777777788887 7776 46788899999999999999999


Q ss_pred             hcCCC-ccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          259 EGENT-GPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       259 ~~~~~-~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      +++.. ++|++.++ .+++.|+++.+.+.++.
T Consensus       233 ~~~~~g~~~~~~~~-~~s~~el~~~i~~~~~~  263 (344)
T 2gn4_A          233 KRMHGGEIFVPKIP-SMKMTDLAKALAPNTPT  263 (344)
T ss_dssp             HHCCSSCEEEECCC-EEEHHHHHHHHCTTCCE
T ss_pred             hhccCCCEEecCCC-cEEHHHHHHHHHHhCCe
Confidence            98764 47887665 79999999999876643

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=3.1e-32  Score=225.92  Aligned_cols=225  Identities=22%  Similarity=0.196  Sum_probs=185.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cC--CcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LI--EVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~--~~d~vi~~a  105 (297)
                      |+|+|||||||||+++++.|++ | ++|++++|+....          .+   +.+|+++..     ..  ++|+|||+|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g-~~V~~~~r~~~~~----------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a   65 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-R-HEVIKVYNSSEIQ----------GG---YKLDLTDFPRLEDFIIKKRPDVIINAA   65 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-T-SCEEEEESSSCCT----------TC---EECCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-C-CeEEEecCCCcCC----------CC---ceeccCCHHHHHHHHHhcCCCEEEECC
Confidence            6899999999999999999994 8 9999999975311          12   788998763     12  499999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      |.........++...+++|+.++.+++++|++.++++|++||..+|+... .+++|+     ++..|.+.|+.+|.++|.
T Consensus        66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~-~~~~e~-----~~~~~~~~Y~~sK~~~e~  139 (273)
T 2ggs_A           66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEK-GNYKEE-----DIPNPINYYGLSKLLGET  139 (273)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSS-CSBCTT-----SCCCCSSHHHHHHHHHHH
T ss_pred             cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCC-CCcCCC-----CCCCCCCHHHHHHHHHHH
Confidence            97654434567888999999999999999999888999999999997653 356666     566677899999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCcc
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP  265 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  265 (297)
                      +++.      +++.++||+.+||+      ..+...++.....+..+.+.++   .+++++++|+|++++.+++++.+|.
T Consensus       140 ~~~~------~~~~~iR~~~v~G~------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~~g~  204 (273)
T 2ggs_A          140 FALQ------DDSLIIRTSGIFRN------KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRKTGI  204 (273)
T ss_dssp             HHCC------TTCEEEEECCCBSS------SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTCCEE
T ss_pred             HHhC------CCeEEEeccccccc------cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCcCCe
Confidence            8865      67899999999983      2355566666677777766543   7899999999999999999877889


Q ss_pred             EEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          266 INIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       266 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      ||+++ +.+|+.|+++.+.+.+|.+.+++
T Consensus       205 ~~i~~-~~~s~~e~~~~~~~~~g~~~~~~  232 (273)
T 2ggs_A          205 IHVAG-ERISRFELALKIKEKFNLPGEVK  232 (273)
T ss_dssp             EECCC-CCEEHHHHHHHHHHHTTCCSCEE
T ss_pred             EEECC-CcccHHHHHHHHHHHhCCChhhc
Confidence            99999 99999999999999999886543

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=2.2e-32  Score=240.85  Aligned_cols=248  Identities=20%  Similarity=0.183  Sum_probs=189.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc--cc----hhhh-------cCCCceEEEecccCCcc---
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DN----LRKW-------IGHPRFELIRHDVTEPL---   94 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~----~~~~-------~~~~~~~~~~~Dl~~~~---   94 (297)
                      .+|+|||||||||||+++++.|++.| ++|++++|+.....  +.    +...       ....++.++.+|+++..   
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYS-HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTE-EEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCC-CEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            46799999999999999999999999 99999999754211  11    1111       01257899999998843   


Q ss_pred             -cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCC-----CCCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDP-----LVHPQDESYWGNVN  168 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~-----~~~~~~e~~~~~~~  168 (297)
                       ..++|+|||+||...   ...++...+++|+.++.+++++|++.+.+||++||.++ |..     ...+++|+.+.  .
T Consensus       147 ~~~~~d~Vih~A~~~~---~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~--~  220 (427)
T 4f6c_A          147 LPENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVY--K  220 (427)
T ss_dssp             CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSC--S
T ss_pred             CcCCCCEEEECCcccC---CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccc--c
Confidence             347999999998764   34567788899999999999999993349999999998 442     23455666332  1


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-----hhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-----GRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      +..+.+.|+.+|.++|.+++.+.+ .+++++++||+.|||+......     ..++..++.....+..+.. +.++..++
T Consensus       221 ~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  298 (427)
T 4f6c_A          221 GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVD  298 (427)
T ss_dssp             SCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEEC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEE
Confidence            244778999999999999998764 5899999999999999864421     2356778888777776554 44688899


Q ss_pred             eeeHHHHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhc
Q 022414          244 FCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNF  288 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g  288 (297)
                      +++++|+|++++.++..+. +++||+++++++++.|+++.+.+ +|
T Consensus       299 ~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          299 FSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             CEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             EeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            9999999999999999875 77999999999999999999998 55

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=3.3e-32  Score=244.67  Aligned_cols=248  Identities=20%  Similarity=0.190  Sum_probs=190.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc--c----hhhh-------cCCCceEEEecccCCcc---
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD--N----LRKW-------IGHPRFELIRHDVTEPL---   94 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~--~----~~~~-------~~~~~~~~~~~Dl~~~~---   94 (297)
                      .+|+|+|||||||||++|+++|.+.| ++|++++|+......  .    +...       ....++.++.+|+.+..   
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYS-HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTE-EEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcC-CEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            46899999999999999999998889 999999997542110  1    1110       11358999999999843   


Q ss_pred             -cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCC-----CCCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDP-----LVHPQDESYWGNVN  168 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~-----~~~~~~e~~~~~~~  168 (297)
                       ..++|+|||+||...   ...++...+++|+.++.+++++|++.+.+|||+||.++ |..     ...+++|+.+.  .
T Consensus       228 ~~~~~D~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~--~  301 (508)
T 4f6l_B          228 LPENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVY--K  301 (508)
T ss_dssp             CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSC--S
T ss_pred             CccCCCEEEECCceec---CCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCccccccccc--c
Confidence             347999999998764   34566778899999999999999994459999999998 432     23455666331  1


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCC-----ChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID-----DGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      +..+.+.|+.+|..+|++++.+.+ .+++++++||+.|||+.....     ...++..++........++. +.+++.++
T Consensus       302 ~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~  379 (508)
T 4f6l_B          302 GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVD  379 (508)
T ss_dssp             SBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEE
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEE
Confidence            234678999999999999998764 599999999999999976432     12356677777777665543 44688999


Q ss_pred             eeeHHHHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhh
Q 022414          244 FCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVN  287 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~  287 (297)
                      +++++|+|++++.++.++. +++||+++++.+++.|+++.+.+..
T Consensus       380 ~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          380 FSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             CEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             EEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            9999999999999999885 7899999999999999999999754

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=7.6e-32  Score=232.66  Aligned_cols=241  Identities=16%  Similarity=0.096  Sum_probs=187.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC----CeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCC---cC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK----NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIE---VD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~---~d   99 (297)
                      +|+|+|||||||||+++++.|+++|.    ++|++++|+.....      ....+++++.+|+++..     ..+   +|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------HEDNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------CCSSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------cccCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            47999999999999999999999884    78999999754332      12357889999998762     234   99


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc--CC-eEE-------EEecceeecCCC--CCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV--GA-RIL-------LTSTSEVYGDPL--VHPQDESYWGNV  167 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-r~v-------~~Ss~~~~~~~~--~~~~~e~~~~~~  167 (297)
                      +|||+|+...     .++...+++|+.++.+++++|++.  ++ ++|       |+||..+|+...  ..+++|+.    
T Consensus        75 ~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~----  145 (364)
T 2v6g_A           75 HVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDL----  145 (364)
T ss_dssp             EEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTS----
T ss_pred             EEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccc----
Confidence            9999998652     467788999999999999999998  67 786       799999998752  34566663    


Q ss_pred             CCCCC-CChHHHhHHHHHHHHHHHHHHhC-CcEEEEeeccccCCCCCCCChhHHHH-HHHHH--HcCCCeEEecCC---c
Q 022414          168 NPIGV-RSCYDEGKRVAETLMFDYHRQHG-IEIRIARIFNTYGPRMNIDDGRVVSN-FIAQA--IRGEPLTVQAPG---T  239 (297)
Q Consensus       168 ~~~~~-~~~Y~~sK~~~e~~~~~~~~~~~-~~~~ivrp~~v~G~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~---~  239 (297)
                       +..| .+.|    ..+|+.++++.++.+ ++++++||+.+|||+.......+.+. +...+  ..+.++.+.+++   .
T Consensus       146 -~~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~  220 (364)
T 2v6g_A          146 -PRLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWD  220 (364)
T ss_dssp             -CCCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHH
T ss_pred             -cCCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccccc
Confidence             3333 4567    457888888876666 99999999999999865322334444 33434  356666656766   3


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC--CccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      ...++++++|+|++++.+++++.  ++.||+++++.+|+.|+++.+.+.+|.+..
T Consensus       221 ~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  275 (364)
T 2v6g_A          221 GYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECG  275 (364)
T ss_dssp             SCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBC
T ss_pred             ccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCC
Confidence            45789999999999999998874  459999999999999999999999998754

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=9.2e-33  Score=238.86  Aligned_cols=216  Identities=25%  Similarity=0.318  Sum_probs=183.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~  111 (297)
                      |||+|||||||||++|++.|+++| + +|++++|+  ...+.+..                 .+.++|+|||+||.... 
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g-~~~v~~~d~~--~d~~~l~~-----------------~~~~~d~Vih~a~~~~~-   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTT-DHHIFEVHRQ--TKEEELES-----------------ALLKADFIVHLAGVNRP-   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHC-CCEEEECCTT--CCHHHHHH-----------------HHHHCSEEEECCCSBCT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CCEEEEECCC--CCHHHHHH-----------------HhccCCEEEECCcCCCC-
Confidence            789999999999999999999999 7 99998884  11111111                 22368999999987653 


Q ss_pred             ccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHH
Q 022414          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD  189 (297)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  189 (297)
                         .++...++.|+.++.+++++|++.++  +|||+||..+|+                    .+.|+.+|.++|++++.
T Consensus        60 ---~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------------~~~Y~~sK~~~E~~~~~  116 (369)
T 3st7_A           60 ---EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------------DNPYGESKLQGEQLLRE  116 (369)
T ss_dssp             ---TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------------CSHHHHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------------CCCchHHHHHHHHHHHH
Confidence               35566778899999999999999985  799999999875                    25699999999999999


Q ss_pred             HHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---CccE
Q 022414          190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPI  266 (297)
Q Consensus       190 ~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~  266 (297)
                      +.++.+++++++||+++||++..+...+++..++..+..+..+.+ .+++..++++|++|+|++++.+++++.   ++.|
T Consensus       117 ~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  195 (369)
T 3st7_A          117 YAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVP  195 (369)
T ss_dssp             HHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEE
T ss_pred             HHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceE
Confidence            998889999999999999998766555688899998888887765 578899999999999999999999876   4789


Q ss_pred             EecCCCcccHHHHHHHHHHhhcccCce
Q 022414          267 NIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       267 ~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      |+++++.+|+.|+++.+.+.+|.+..+
T Consensus       196 ~i~~~~~~s~~e~~~~~~~~~g~~~~~  222 (369)
T 3st7_A          196 TVPNVFKVTLGEIVDLLYKFKQSRLDR  222 (369)
T ss_dssp             CCSCCEEEEHHHHHHHHHHHHHHHHHT
T ss_pred             EeCCCCceeHHHHHHHHHHHhCCCccc
Confidence            999999999999999999999987443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1e-32  Score=222.64  Aligned_cols=216  Identities=15%  Similarity=0.104  Sum_probs=165.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~a~  106 (297)
                      +|+|+|||||||||+++++.|+++| ++|++++|+.......      ..+++++.+|+++..     +.++|+|||+||
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   76 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIKIE------NEHLKVKKADVSSLDEVCEVCKGADAVISAFN   76 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCCCC------CTTEEEECCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccchhc------cCceEEEEecCCCHHHHHHHhcCCCEEEEeCc
Confidence            5899999999999999999999999 9999999975432211      157899999998863     457999999997


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      ...     .+ .+.++.|+.++.+++++|++.++ |||++||..+++..... ..++     ++..|.+.|+.+|.+.|.
T Consensus        77 ~~~-----~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~-----~~~~p~~~Y~~sK~~~e~  144 (227)
T 3dhn_A           77 PGW-----NN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMD-----SGEVPENILPGVKALGEF  144 (227)
T ss_dssp             C------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGG-----TTCSCGGGHHHHHHHHHH
T ss_pred             CCC-----CC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-cccc-----CCcchHHHHHHHHHHHHH
Confidence            542     11 23668899999999999999998 89999999876543222 1222     456677889999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--C
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~  263 (297)
                      +++.+.++.+++++++||+.+|||+......          ..+....+. .++. ++++|++|+|++++.+++++.  +
T Consensus       145 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~----------~~~~~~~~~-~~~~-~~~i~~~Dva~ai~~~l~~~~~~g  212 (227)
T 3dhn_A          145 YLNFLMKEKEIDWVFFSPAADMRPGVRTGRY----------RLGKDDMIV-DIVG-NSHISVEDYAAAMIDELEHPKHHQ  212 (227)
T ss_dssp             HHHTGGGCCSSEEEEEECCSEEESCCCCCCC----------EEESSBCCC-CTTS-CCEEEHHHHHHHHHHHHHSCCCCS
T ss_pred             HHHHHhhccCccEEEEeCCcccCCCccccce----------eecCCCccc-CCCC-CcEEeHHHHHHHHHHHHhCccccC
Confidence            9888877779999999999999997533210          112222221 2222 789999999999999999987  7


Q ss_pred             ccEEecCCCcccHHH
Q 022414          264 GPINIGNPGEFTMLE  278 (297)
Q Consensus       264 ~~~~i~~~~~~s~~e  278 (297)
                      +.|+++++++.+|.+
T Consensus       213 ~~~~~~~~~~~~~~~  227 (227)
T 3dhn_A          213 ERFTIGYLEHHHHHH  227 (227)
T ss_dssp             EEEEEECCSCCC---
T ss_pred             cEEEEEeehhcccCC
Confidence            799999999988763

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=1.4e-32  Score=234.88  Aligned_cols=251  Identities=21%  Similarity=0.267  Sum_probs=174.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc--chhhhcCCCceEEEecccCCcc-----cCCcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD--NLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~  104 (297)
                      +|+||||||+||||++|++.|+++| ++|+++.|+......  .+..+....+++++++|+++..     +.++|+|||+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKG-YAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTT-CEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCC-CEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            6899999999999999999999999 999998886532211  1111111246888999998763     3479999999


Q ss_pred             cCCCCCcccccCh-hhhHHHhHHHHHHHHHHHHHcC-C-eEEEEeccee-ecCCC---CCCCCCCCCCCCCC---CCC-C
Q 022414          105 ACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEV-YGDPL---VHPQDESYWGNVNP---IGV-R  173 (297)
Q Consensus       105 a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~-~~~~~---~~~~~e~~~~~~~~---~~~-~  173 (297)
                      |+....  ...++ .+.+++|+.++.+++++|++.+ + ||||+||..+ |+...   ..+++|+.+...+.   ..| .
T Consensus        88 A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  165 (338)
T 2rh8_A           88 ATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPT  165 (338)
T ss_dssp             SSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCC
T ss_pred             CCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCcc
Confidence            986532  22233 3478999999999999999986 7 8999999874 43211   13567765433221   111 2


Q ss_pred             ChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC------CceeEeeeeH
Q 022414          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP------GTQTRSFCYV  247 (297)
Q Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~v  247 (297)
                      ..|+.+|.++|..++.+..+.+++++++||+++|||.........+..+. ....+.... ++.      +...++++|+
T Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~i~v  243 (338)
T 2rh8_A          166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAM-SLITGNEFL-INGMKGMQMLSGSVSIAHV  243 (338)
T ss_dssp             CCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHH-HHHHTCHHH-HHHHHHHHHHHSSEEEEEH
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-cccccccccccCcccEEEH
Confidence            25999999999999988877799999999999999986432222222221 122332211 111      1223589999


Q ss_pred             HHHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhc
Q 022414          248 SDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNF  288 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g  288 (297)
                      +|+|++++.+++++. .+.|++++ +.+|+.|+++.+.+.++
T Consensus       244 ~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          244 EDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYP  284 (338)
T ss_dssp             HHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCC
Confidence            999999999998765 67787765 57899999999999876

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=1e-31  Score=228.09  Aligned_cols=249  Identities=21%  Similarity=0.269  Sum_probs=172.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec-CCCC--CccchhhhcC-CCceEEEecccCCcc-----cCCcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN-YFTG--SKDNLRKWIG-HPRFELIRHDVTEPL-----LIEVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~-----~~~~d~vi  102 (297)
                      +|+|||||||||||+++++.|+++| ++|+++.| +...  ....+..+.. ..++.++.+|+++..     ..++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENG-YSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCC-CEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            4799999999999999999999999 99999888 4321  1111111100 125788899998863     34799999


Q ss_pred             EccCCCCCcccccC-hhhhHHHhHHHHHHHHHHHHHc-CC-eEEEEecceee-cCCC-CCCCCCCCCCCCC---CCCCCC
Q 022414          103 HLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVY-GDPL-VHPQDESYWGNVN---PIGVRS  174 (297)
Q Consensus       103 ~~a~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~~~~-~~~~-~~~~~e~~~~~~~---~~~~~~  174 (297)
                      |+|+...  ....+ ....+++|+.++.+++++|++. ++ ||||+||..++ +... ..+++|+.+...+   +..|..
T Consensus        80 h~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~  157 (322)
T 2p4h_X           80 HTASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFG  157 (322)
T ss_dssp             ECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred             EcCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccc
Confidence            9997531  22223 3458899999999999999988 67 89999998753 3221 2244555322110   112223


Q ss_pred             -hHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHH
Q 022414          175 -CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       175 -~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                       .|+.+|.++|.++.++....+++++++||+++|||.........+..+. ....+....+ +.  ...+++|++|+|++
T Consensus       158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~-~~~~g~~~~~-~~--~~~~~i~v~Dva~a  233 (322)
T 2p4h_X          158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKAL-VLVLGKKEQI-GV--TRFHMVHVDDVARA  233 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHT-HHHHSCGGGC-CE--EEEEEEEHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHH-HHHhCCCccC-cC--CCcCEEEHHHHHHH
Confidence             6999999999999988877799999999999999975432222222221 2233432222 21  33489999999999


Q ss_pred             HHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhc
Q 022414          254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNF  288 (297)
Q Consensus       254 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g  288 (297)
                      ++.+++++. .|.|+ .+++.+|+.|+++.+.+.++
T Consensus       234 ~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          234 HIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred             HHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCC
Confidence            999998765 67788 56688999999999998774

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.98  E-value=2.6e-31  Score=215.73  Aligned_cols=216  Identities=15%  Similarity=0.213  Sum_probs=165.0

Q ss_pred             cccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCce-EEEecccCCc---ccCCcC
Q 022414           24 RFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRF-ELIRHDVTEP---LLIEVD   99 (297)
Q Consensus        24 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~---~~~~~d   99 (297)
                      +......++|+|+||||||+||+++++.|+++| ++|++++|+....    ... ...++ .++.+|+++.   .+.++|
T Consensus        13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R~~~~~----~~~-~~~~~~~~~~~Dl~~~~~~~~~~~D   86 (236)
T 3e8x_A           13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKG-HEPVAMVRNEEQG----PEL-RERGASDIVVANLEEDFSHAFASID   86 (236)
T ss_dssp             --------CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSGGGH----HHH-HHTTCSEEEECCTTSCCGGGGTTCS
T ss_pred             cccccCcCCCeEEEECCCChHHHHHHHHHHhCC-CeEEEEECChHHH----HHH-HhCCCceEEEcccHHHHHHHHcCCC
Confidence            334445668999999999999999999999999 9999999964322    111 12367 8999999722   345799


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHH
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE  178 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~  178 (297)
                      +|||+||...    ..++...+++|+.++.+++++|++.++ +||++||...+..       +.     ++ .+...|+.
T Consensus        87 ~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~-----~~-~~~~~Y~~  149 (236)
T 3e8x_A           87 AVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQ-----GP-MNMRHYLV  149 (236)
T ss_dssp             EEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GG-----SC-GGGHHHHH
T ss_pred             EEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CC-----Ch-hhhhhHHH
Confidence            9999998654    356788899999999999999999998 8999999554321       11     11 44578999


Q ss_pred             hHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHH
Q 022414          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (297)
Q Consensus       179 sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  258 (297)
                      +|.++|.+++    ..+++++++||+.+||+...                 ..+.....++...++++++|+|++++.++
T Consensus       150 sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~-----------------~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  208 (236)
T 3e8x_A          150 AKRLADDELK----RSSLDYTIVRPGPLSNEEST-----------------GKVTVSPHFSEITRSITRHDVAKVIAELV  208 (236)
T ss_dssp             HHHHHHHHHH----HSSSEEEEEEECSEECSCCC-----------------SEEEEESSCSCCCCCEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHH----HCCCCEEEEeCCcccCCCCC-----------------CeEEeccCCCcccCcEeHHHHHHHHHHHh
Confidence            9999999875    56899999999999998631                 12333345556688999999999999999


Q ss_pred             hcCC--CccEEecCCCcccHHHHHHHHH
Q 022414          259 EGEN--TGPINIGNPGEFTMLELAENVK  284 (297)
Q Consensus       259 ~~~~--~~~~~i~~~~~~s~~e~~~~i~  284 (297)
                      +++.  ++.|+++++ .+++.|+++.+.
T Consensus       209 ~~~~~~g~~~~v~~~-~~~~~e~~~~i~  235 (236)
T 3e8x_A          209 DQQHTIGKTFEVLNG-DTPIAKVVEQLG  235 (236)
T ss_dssp             TCGGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred             cCccccCCeEEEeCC-CcCHHHHHHHhc
Confidence            9874  668999887 699999998764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.98  E-value=1.4e-30  Score=222.45  Aligned_cols=250  Identities=21%  Similarity=0.293  Sum_probs=174.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh--cCC--CceEEEecccCCcc-----cCCcCEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGH--PRFELIRHDVTEPL-----LIEVDQI  101 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--~~~--~~~~~~~~Dl~~~~-----~~~~d~v  101 (297)
                      ++|+||||||+||||+++++.|+++| ++|+++.|+..... .....  +..  .+++++.+|+++..     ..++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERG-YTVRATVRDPTNVK-KVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCTTCHH-HHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEECCcchhH-HHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            57899999999999999999999999 99999988643211 11111  111  25788999998863     3479999


Q ss_pred             EEccCCCCCcccccCh-hhhHHHhHHHHHHHHHHHHHcC-C-eEEEEeccee-ecCCC-CCCCCCCCCCCCCC----CCC
Q 022414          102 YHLACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEV-YGDPL-VHPQDESYWGNVNP----IGV  172 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~-~~~~~-~~~~~e~~~~~~~~----~~~  172 (297)
                      ||+|+...  ....++ ...+++|+.++.+++++|++.+ + ||||+||..+ |+... ..+.+|+.+...+.    ..+
T Consensus        82 ih~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           82 FHVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             EECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence            99998652  122333 3578999999999999999987 6 8999999874 44322 22345553321100    113


Q ss_pred             CChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHH
Q 022414          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      ...|+.+|.++|.++..+....+++++++||+++|||.........+.... ....+... .++... ..+++|++|+|+
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~-~~~~~~-~~~~i~v~Dva~  236 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITAL-SPITGNEA-HYSIIR-QGQFVHLDDLCN  236 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHT-HHHHTCGG-GHHHHT-EEEEEEHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCCc-cccccC-CCCEEEHHHHHH
Confidence            457999999999999988877799999999999999985432122221111 11223221 112112 245999999999


Q ss_pred             HHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhc
Q 022414          253 GLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNF  288 (297)
Q Consensus       253 ~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g  288 (297)
                      +++.+++++. .+.|++++ +.+++.|+++.+.+.++
T Consensus       237 a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          237 AHIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYP  272 (337)
T ss_dssp             HHHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCT
T ss_pred             HHHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCC
Confidence            9999998765 56776554 67899999999999874

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.97  E-value=7.1e-31  Score=217.00  Aligned_cols=214  Identities=18%  Similarity=0.178  Sum_probs=176.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~a~  106 (297)
                      +|+|+||||+|+||+++++.|+++| ++|++++|+.....        ..++.++.+|+++..     ..++|+|||+||
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMA-EILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVAGCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence            5789999999999999999999999 99999999753322        357899999999863     347999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCC-CCCCCCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL-VHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~-~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      ..    ...++...+++|+.++.+++++|++.++ |+|++||..+|+... ..+++|+     .+..+.+.|+.+|...|
T Consensus        74 ~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~-----~~~~~~~~Y~~sK~~~e  144 (267)
T 3rft_A           74 IS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPD-----VPARPDGLYGVSKCFGE  144 (267)
T ss_dssp             CC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTT-----SCCCCCSHHHHHHHHHH
T ss_pred             Cc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCC-----CCCCCCChHHHHHHHHH
Confidence            74    3456788899999999999999999998 999999999987442 3455665     57778899999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--  262 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--  262 (297)
                      .+++.+..+.+++++++||+.+||+.                         .+++...++++++|+++++..+++.+.  
T Consensus       145 ~~~~~~a~~~g~~~~~vr~~~v~~~~-------------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  199 (267)
T 3rft_A          145 NLARMYFDKFGQETALVRIGSCTPEP-------------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLG  199 (267)
T ss_dssp             HHHHHHHHHHCCCEEEEEECBCSSSC-------------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCC
T ss_pred             HHHHHHHHHhCCeEEEEEeecccCCC-------------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCC
Confidence            99999998889999999999999874                         223344568999999999999999877  


Q ss_pred             CccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          263 TGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       263 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                      ...+++.++++.++.++...  +.+|..
T Consensus       200 ~~~~~~~s~~~~~~~~~~~~--~~~g~~  225 (267)
T 3rft_A          200 CPVVWGASANDAGWWDNSHL--GFLGWK  225 (267)
T ss_dssp             SCEEEECCCCTTCCBCCGGG--GGGCCC
T ss_pred             ceEEEEeCCCCCCcccChhH--HHCCCC
Confidence            45788888888777766433  556654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.97  E-value=4.8e-31  Score=218.11  Aligned_cols=216  Identities=21%  Similarity=0.226  Sum_probs=177.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~a~  106 (297)
                      +|+|+||||||+||+++++.|+++| ++|++++|+.....        ..++.++.+|+++..     +.++|+|||+||
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   72 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDIVDLGAA--------EAHEEIVACDLADAQAVHDLVKDCDGIIHLGG   72 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTE-EEEEECCSSCCCCC--------CTTEEECCCCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCCCcccc--------CCCccEEEccCCCHHHHHHHHcCCCEEEECCc
Confidence            4689999999999999999999999 99999999753211        136788999998763     347999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCC-CCCCCCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL-VHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~-~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      ..    ...+....+++|+.++.+++++|++.++ +||++||..+|+... ..+++|+     ++..|.+.|+.+|..+|
T Consensus        73 ~~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~e  143 (267)
T 3ay3_A           73 VS----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTE-----VPRRPDSLYGLSKCFGE  143 (267)
T ss_dssp             CC----SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTT-----SCCCCCSHHHHHHHHHH
T ss_pred             CC----CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCC-----CCCCCCChHHHHHHHHH
Confidence            65    2345677889999999999999999998 899999999997643 4566776     56777889999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--  262 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--  262 (297)
                      .+++.+..+.+++++++||+.+|+..   .                      +++...++++++|+|++++.+++++.  
T Consensus       144 ~~~~~~~~~~gi~~~~lrp~~v~~~~---~----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~  198 (267)
T 3ay3_A          144 DLASLYYHKFDIETLNIRIGSCFPKP---K----------------------DARMMATWLSVDDFMRLMKRAFVAPKLG  198 (267)
T ss_dssp             HHHHHHHHTTCCCEEEEEECBCSSSC---C----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHcCCCEEEEeceeecCCC---C----------------------CCCeeeccccHHHHHHHHHHHHhCCCCC
Confidence            99998887789999999999998421   0                      11224578999999999999999876  


Q ss_pred             CccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          263 TGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       263 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      .+.|++.++...++.++.+.  +.+|.+.+
T Consensus       199 ~~~~~~~~~~~~~~~d~~~~--~~lg~~p~  226 (267)
T 3ay3_A          199 CTVVYGASANTESWWDNDKS--AFLGWVPQ  226 (267)
T ss_dssp             EEEEEECCSCSSCCBCCGGG--GGGCCCCC
T ss_pred             ceeEecCCCccccccCHHHH--HHcCCCCC
Confidence            46889988888888888777  78887754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.97  E-value=8.5e-30  Score=212.79  Aligned_cols=215  Identities=14%  Similarity=0.141  Sum_probs=168.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a  105 (297)
                      |+|+|||||||||+++++.|+++  | ++|++++|+..... .+.    ..+++++.+|++|.     .+.++|+|||+|
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~-~l~----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a   74 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPA-SQIIAIVRNVEKAS-TLA----DQGVEVRHGDYNQPESLQKAFAGVSKLLFIS   74 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCG-GGEEEEESCTTTTH-HHH----HTTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCC-CeEEEEEcCHHHHh-HHh----hcCCeEEEeccCCHHHHHHHHhcCCEEEEcC
Confidence            68999999999999999999998  8 99999999653322 111    24688999999886     345799999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      +...        ..  +.|+.++.+++++|++.++ +||++||.+++..               +    ..|+.+|.++|
T Consensus        75 ~~~~--------~~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~---------------~----~~y~~~K~~~E  125 (287)
T 2jl1_A           75 GPHY--------DN--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEES---------------I----IPLAHVHLATE  125 (287)
T ss_dssp             CCCS--------CH--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC---------------C----STHHHHHHHHH
T ss_pred             CCCc--------Cc--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC---------------C----CchHHHHHHHH
Confidence            8521        11  5689999999999999998 8999999887521               1    25999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--  262 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--  262 (297)
                      ++++.    .+++++++||+.++|+..    ..++    .......... ...++..+++++++|+|++++.+++++.  
T Consensus       126 ~~~~~----~~~~~~ilrp~~~~~~~~----~~~~----~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  192 (287)
T 2jl1_A          126 YAIRT----TNIPYTFLRNALYTDFFV----NEGL----RASTESGAIV-TNAGSGIVNSVTRNELALAAATVLTEEGHE  192 (287)
T ss_dssp             HHHHH----TTCCEEEEEECCBHHHHS----SGGG----HHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCT
T ss_pred             HHHHH----cCCCeEEEECCEeccccc----hhhH----HHHhhCCcee-ccCCCCccCccCHHHHHHHHHHHhcCCCCC
Confidence            98853    689999999998887541    1112    2222222232 3566778899999999999999998864  


Q ss_pred             CccEEecCCCcccHHHHHHHHHHhhcccCceee
Q 022414          263 TGPINIGNPGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       263 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      ++.||+++++.+|+.|+++.+.+.+|.+.++..
T Consensus       193 g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  225 (287)
T 2jl1_A          193 NKTYNLVSNQPWTFDELAQILSEVSGKKVVHQP  225 (287)
T ss_dssp             TEEEEECCSSCBCHHHHHHHHHHHHSSCCEEEE
T ss_pred             CcEEEecCCCcCCHHHHHHHHHHHHCCcceEEe
Confidence            558999999999999999999999998866543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=7.8e-30  Score=218.61  Aligned_cols=226  Identities=14%  Similarity=0.148  Sum_probs=174.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhh--hcCCCceEEEecccCCc-----ccC--CcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WIGHPRFELIRHDVTEP-----LLI--EVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~-----~~~--~~d~vi  102 (297)
                      +|+|+||||||+||++|++.|++.| ++|++++|+.....+....  .+...+++++.+|+.|.     .+.  ++|+||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV   88 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence            5899999999999999999999999 9999999976433322221  12235899999999886     234  899999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (297)
                      |+++.               .|+.++.+++++|++.| + +||+ |   .||..    .+|+     ++..|...|+.+|
T Consensus        89 ~~a~~---------------~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~e~-----~~~~p~~~y~~sK  140 (346)
T 3i6i_A           89 STVGG---------------ESILDQIALVKAMKAVGTIKRFLP-S---EFGHD----VNRA-----DPVEPGLNMYREK  140 (346)
T ss_dssp             ECCCG---------------GGGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTTC-----CCCTTHHHHHHHH
T ss_pred             ECCch---------------hhHHHHHHHHHHHHHcCCceEEee-c---ccCCC----CCcc-----CcCCCcchHHHHH
Confidence            99974               27788999999999999 8 5664 4   34422    2333     4556778899999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhc
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                      ..+|+++++    .+++++++||+.++|......    . ........+..+.++++++..+++++++|+|++++.++.+
T Consensus       141 ~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~----~-~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~  211 (346)
T 3i6i_A          141 RRVRQLVEE----SGIPFTYICCNSIASWPYYNN----I-HPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDD  211 (346)
T ss_dssp             HHHHHHHHH----TTCCBEEEECCEESSCCCSCC----------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHH----cCCCEEEEEecccccccCccc----c-ccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhC
Confidence            999998865    689999999999999753211    1 0111122455678889999999999999999999999998


Q ss_pred             CC--CccEEecC-CCcccHHHHHHHHHHhhcccCceee
Q 022414          261 EN--TGPINIGN-PGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       261 ~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      +.  ++.|++.+ ++.+|+.|+++.+.+.+|.+.++..
T Consensus       212 ~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~  249 (346)
T 3i6i_A          212 VRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVT  249 (346)
T ss_dssp             GGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEE
T ss_pred             ccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEe
Confidence            76  67889885 4889999999999999999876654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.97  E-value=1e-29  Score=204.03  Aligned_cols=201  Identities=15%  Similarity=0.213  Sum_probs=160.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCC-c-----ccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-P-----LLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~-----~~~~~d~vi~~a~  106 (297)
                      |+|+||||||+||+++++.|+++| ++|++++|+.....+       ..+++++++|+++ .     .+.++|+|||+||
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag   72 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARKVEQVPQ-------YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSG   72 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSS-CEEEEEESSGGGSCC-------CTTEEEEECCTTSCHHHHHTTTTTCSEEEECCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCccchhh-------cCCceEEEecccCCHHHHHHHHcCCCEEEECCc
Confidence            689999999999999999999999 999999997543221       1579999999998 4     3558999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      ....        +.+++|+.++.+++++|++.++ +||++||.++++..   +..|      .+..|.+.|+.+|.++|+
T Consensus        73 ~~~~--------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e------~~~~~~~~Y~~sK~~~e~  135 (219)
T 3dqp_A           73 SGGK--------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG------AGFDALKDYYIAKHFADL  135 (219)
T ss_dssp             CTTS--------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS------HHHHHTHHHHHHHHHHHH
T ss_pred             CCCC--------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc------cccccccHHHHHHHHHHH
Confidence            7542        2557899999999999999998 89999998776422   1222      133456789999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--C
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~  263 (297)
                      +++   ...+++++++||+.+||+....                 .+.+   ++..+++++++|+|++++.+++++.  +
T Consensus       136 ~~~---~~~~i~~~ilrp~~v~g~~~~~-----------------~~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g  192 (219)
T 3dqp_A          136 YLT---KETNLDYTIIQPGALTEEEATG-----------------LIDI---NDEVSASNTIGDVADTIKELVMTDHSIG  192 (219)
T ss_dssp             HHH---HSCCCEEEEEEECSEECSCCCS-----------------EEEE---SSSCCCCEEHHHHHHHHHHHHTCGGGTT
T ss_pred             HHH---hccCCcEEEEeCceEecCCCCC-----------------cccc---CCCcCCcccHHHHHHHHHHHHhCccccC
Confidence            986   4568999999999999986321                 1111   2566789999999999999999876  5


Q ss_pred             ccEEecCCCcccHHHHHHH
Q 022414          264 GPINIGNPGEFTMLELAEN  282 (297)
Q Consensus       264 ~~~~i~~~~~~s~~e~~~~  282 (297)
                      +.|+++++ ..++.|+++.
T Consensus       193 ~~~~i~~g-~~~~~e~~~~  210 (219)
T 3dqp_A          193 KVISMHNG-KTAIKEALES  210 (219)
T ss_dssp             EEEEEEEC-SEEHHHHHHT
T ss_pred             cEEEeCCC-CccHHHHHHH
Confidence            68999886 5899998753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.96  E-value=9.4e-29  Score=206.30  Aligned_cols=211  Identities=15%  Similarity=0.156  Sum_probs=161.7

Q ss_pred             EEEEEcCCchhHHHHHHHHHhc--CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccC
Q 022414           34 RILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLAC  106 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~  106 (297)
                      +|+|||||||||+++++.|+++  | ++|++++|+...... +.    ..+++++.+|+++.     .+.++|+|||+|+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~-~~----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPA-SQIVAIVRNPAKAQA-LA----AQGITVRQADYGDEAALTSALQGVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCG-GGEEEEESCTTTCHH-HH----HTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCC-ceEEEEEcChHhhhh-hh----cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence            5899999999999999999998  8 999999996543221 11    24688999999875     3457999999997


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      ...            ..|+.++.+++++|++.++ +||++||..++.               .+    ..|+.+|.++|+
T Consensus        75 ~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~---------------~~----~~y~~sK~~~e~  123 (286)
T 2zcu_A           75 SEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT---------------SP----LGLADEHIETEK  123 (286)
T ss_dssp             -------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT---------------CC----STTHHHHHHHHH
T ss_pred             CCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC---------------Cc----chhHHHHHHHHH
Confidence            421            1467899999999999998 899999988751               11    359999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--C
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~  263 (297)
                      ++++    .+++++++||+.++++.     .    .++.....+..+. .+.++..+++++++|+|++++.+++++.  +
T Consensus       124 ~~~~----~~~~~~ilrp~~~~~~~-----~----~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  189 (286)
T 2zcu_A          124 MLAD----SGIVYTLLRNGWYSENY-----L----ASAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEG  189 (286)
T ss_dssp             HHHH----HCSEEEEEEECCBHHHH-----H----TTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTT
T ss_pred             HHHH----cCCCeEEEeChHHhhhh-----H----HHhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCC
Confidence            8854    58999999998766542     1    1122223333343 4667788999999999999999998864  5


Q ss_pred             ccEEecCCCcccHHHHHHHHHHhhcccCceee
Q 022414          264 GPINIGNPGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       264 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      +.||+++++.+|+.|+++.+.+.+|.+.++..
T Consensus       190 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  221 (286)
T 2zcu_A          190 KVYELAGDSAWTLTQLAAELTKQSGKQVTYQN  221 (286)
T ss_dssp             CEEEECCSSCBCHHHHHHHHHHHHSSCCEEEE
T ss_pred             ceEEEeCCCcCCHHHHHHHHHHHHCCCCceee
Confidence            68999998899999999999999998766543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=6.4e-29  Score=199.51  Aligned_cols=212  Identities=14%  Similarity=0.160  Sum_probs=139.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc---ccCCcCEEEEccCCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP---LLIEVDQIYHLACPAS  109 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~d~vi~~a~~~~  109 (297)
                      |||+||||||+||+++++.|+++| ++|++++|+...    .....  .+++++.+|+++.   .+.++|+|||+||...
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~   73 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVRNAGK----ITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGISP   73 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCSHH----HHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCSST
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEcCchh----hhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcCCc
Confidence            789999999999999999999999 999999996422    22221  5789999999886   3567999999998742


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecC-CCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHH
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM  187 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~-~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~  187 (297)
                      .         ....|+.++.+++++|++.++ |+|++||...+.. ....+..++     .+..|.+.|+.+|...|.+ 
T Consensus        74 ~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~-----~~~~~~~~y~~~k~~~e~~-  138 (221)
T 3ew7_A           74 D---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLES-----KGLREAPYYPTARAQAKQL-  138 (221)
T ss_dssp             T---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC------------------------CCCSCCHHHHHHHH-
T ss_pred             c---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCcccccc-----CCCCCHHHHHHHHHHHHHH-
Confidence            1         135688999999999999977 9999999876543 322233444     4555667799999999986 


Q ss_pred             HHHHH-HhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--Cc
Q 022414          188 FDYHR-QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG  264 (297)
Q Consensus       188 ~~~~~-~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~  264 (297)
                      ..+.. ..+++++++||+.+||++...  ..+       ...+..+.+.+++   .++++++|+|++++.+++++.  ++
T Consensus       139 ~~~~~~~~gi~~~ivrp~~v~g~~~~~--~~~-------~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~  206 (221)
T 3ew7_A          139 EHLKSHQAEFSWTYISPSAMFEPGERT--GDY-------QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNE  206 (221)
T ss_dssp             HHHHTTTTTSCEEEEECSSCCCCC---------------------------------CCCHHHHHHHHHHHHHSCSCTTS
T ss_pred             HHHHhhccCccEEEEeCcceecCCCcc--Cce-------EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCC
Confidence            33333 568999999999999984211  101       1112223332333   368999999999999999987  67


Q ss_pred             cEEecCCCcccHHH
Q 022414          265 PINIGNPGEFTMLE  278 (297)
Q Consensus       265 ~~~i~~~~~~s~~e  278 (297)
                      .|++.++.+.+..|
T Consensus       207 ~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          207 HFTVAGKLEHHHHH  220 (221)
T ss_dssp             EEECCC--------
T ss_pred             EEEECCCCcccccc
Confidence            99999987776654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.96  E-value=9.3e-28  Score=200.63  Aligned_cols=214  Identities=16%  Similarity=0.203  Sum_probs=161.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~  106 (297)
                      |+|+||||||+||+++++.|.+. | ++|++++|+......     +...+++++.+|++|.     .+.++|+|||+++
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g-~~V~~~~R~~~~~~~-----~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~   74 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHI-DHFHIGVRNVEKVPD-----DWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS   74 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTC-TTEEEEESSGGGSCG-----GGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCC-CcEEEEECCHHHHHH-----hhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence            68999999999999999999998 8 999999997543221     1235799999999986     3568999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      ....          ...|+.++.+++++|++.|+ +||++||....         +.     .+.    .+...+...|.
T Consensus        75 ~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~---------~~-----~~~----~~~~~~~~~e~  126 (289)
T 3e48_A           75 IIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQ---------HN-----NPF----HMSPYFGYASR  126 (289)
T ss_dssp             CCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCS---------TT-----CCS----TTHHHHHHHHH
T ss_pred             CCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCC---------CC-----CCC----ccchhHHHHHH
Confidence            6532          13478899999999999998 89999994421         00     111    12222333444


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--C
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~  263 (297)
                      .+    ...+++++++||+.+||+.     ..+    +.....+.. .....++..+++++++|+|++++.++.++.  +
T Consensus       127 ~~----~~~g~~~~ilrp~~~~~~~-----~~~----~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g  192 (289)
T 3e48_A          127 LL----STSGIDYTYVRMAMYMDPL-----KPY----LPELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDTWG  192 (289)
T ss_dssp             HH----HHHCCEEEEEEECEESTTH-----HHH----HHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTT
T ss_pred             HH----HHcCCCEEEEecccccccc-----HHH----HHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCcCC
Confidence            33    4569999999999999863     122    222232222 334667889999999999999999999876  6


Q ss_pred             ccEEecCCCcccHHHHHHHHHHhhcccCceee
Q 022414          264 GPINIGNPGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       264 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      +.|+++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus       193 ~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~  223 (289)
T 3e48_A          193 KRYLLS-GYSYDMKELAAILSEASGTEIKYEP  223 (289)
T ss_dssp             CEEEEC-CEEEEHHHHHHHHHHHHTSCCEECC
T ss_pred             ceEEeC-CCcCCHHHHHHHHHHHHCCceeEEe
Confidence            699999 9999999999999999998866554

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.96  E-value=1.7e-28  Score=197.42  Aligned_cols=213  Identities=13%  Similarity=0.038  Sum_probs=152.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc---cCCcCEEEEccCCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL---LIEVDQIYHLACPAS  109 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~d~vi~~a~~~~  109 (297)
                      |||+||||||+||+++++.|+++| ++|++++|+...    .... ...+++++.+|+++..   +.++|+|||+||...
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~----~~~~-~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~   74 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRG-HEVLAVVRDPQK----AADR-LGATVATLVKEPLVLTEADLDSVDAVVDALSVPW   74 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHH----HHHH-TCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEecccc----cccc-cCCCceEEecccccccHhhcccCCEEEECCccCC
Confidence            789999999999999999999999 999999996422    2222 2357899999998863   457999999998752


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCC-C--CCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLV-H--PQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~-~--~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      .       ......|+.++.+++++|++.+.|+|++||.+.+..... .  +..++     ....|.+.|+.+|...|. 
T Consensus        75 ~-------~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~-----~~~~~~~~y~~sK~~~e~-  141 (224)
T 3h2s_A           75 G-------SGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFP-----ESAASQPWYDGALYQYYE-  141 (224)
T ss_dssp             T-------SSCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCC-----GGGGGSTTHHHHHHHHHH-
T ss_pred             C-------cchhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCC-----CCCccchhhHHHHHHHHH-
Confidence            1       112367999999999999999988999999865443222 1  22222     233346789999999994 


Q ss_pred             HHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--Cc
Q 022414          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG  264 (297)
Q Consensus       187 ~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~  264 (297)
                      +..+.+..+++++++||+.+||++....   +       ......+.   .+....++++++|+|++++.+++++.  ++
T Consensus       142 ~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~-------~~~~~~~~---~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~  208 (224)
T 3h2s_A          142 YQFLQMNANVNWIGISPSEAFPSGPATS---Y-------VAGKDTLL---VGEDGQSHITTGNMALAILDQLEHPTAIRD  208 (224)
T ss_dssp             HHHHTTCTTSCEEEEEECSBCCCCCCCC---E-------EEESSBCC---CCTTSCCBCCHHHHHHHHHHHHHSCCCTTS
T ss_pred             HHHHHhcCCCcEEEEcCccccCCCcccC---c-------eecccccc---cCCCCCceEeHHHHHHHHHHHhcCccccCC
Confidence            4555556789999999999999853211   0       01111111   12334689999999999999999987  67


Q ss_pred             cEEecCCCcccHH
Q 022414          265 PINIGNPGEFTML  277 (297)
Q Consensus       265 ~~~i~~~~~~s~~  277 (297)
                      .|++.+.+..++.
T Consensus       209 ~~~~~~~~~~~~~  221 (224)
T 3h2s_A          209 RIVVRDADLEHHH  221 (224)
T ss_dssp             EEEEEECC-----
T ss_pred             EEEEecCcchhcc
Confidence            8999887666554

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.96  E-value=4.8e-29  Score=199.43  Aligned_cols=202  Identities=20%  Similarity=0.223  Sum_probs=156.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCC--eEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCC---cCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIE---VDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~d~vi~~a  105 (297)
                      ++|+|+||||||+||+++++.|+++| +  +|++++|+...         ...+++++.+|+++.....   +|+|||+|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g-~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a   73 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEP-TLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGSIDTAFCCL   73 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCT-TCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSCCSEEEECC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCC-CCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhhhcEEEECe
Confidence            46899999999999999999999999 6  99999997543         1246788888987652211   89999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      |....  ...++...+++|+.++.+++++|++.++ ++|++||..+|+.                  +.+.|+.+|.+.|
T Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------------~~~~y~~sK~~~e  133 (215)
T 2a35_A           74 GTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------------SSIFYNRVKGELE  133 (215)
T ss_dssp             CCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHHHH
T ss_pred             eeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC------------------CccHHHHHHHHHH
Confidence            86532  3456778889999999999999999998 7999999988742                  2357999999999


Q ss_pred             HHHHHHHHHhCCc-EEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCC
Q 022414          185 TLMFDYHRQHGIE-IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT  263 (297)
Q Consensus       185 ~~~~~~~~~~~~~-~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  263 (297)
                      ++++.    .+++ ++++||+.+||+....   .+...+    . +....+ .++  .+++++++|+|++++.+++++.+
T Consensus       134 ~~~~~----~~~~~~~~vrp~~v~g~~~~~---~~~~~~----~-~~~~~~-~~~--~~~~i~~~Dva~~~~~~~~~~~~  198 (215)
T 2a35_A          134 QALQE----QGWPQLTIARPSLLFGPREEF---RLAEIL----A-APIARI-LPG--KYHGIEACDLARALWRLALEEGK  198 (215)
T ss_dssp             HHHTT----SCCSEEEEEECCSEESTTSCE---EGGGGT----T-CCCC-----C--HHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             HHHHH----cCCCeEEEEeCceeeCCCCcc---hHHHHH----H-Hhhhhc-cCC--CcCcEeHHHHHHHHHHHHhcCCC
Confidence            98865    4898 9999999999997431   121111    1 222222 222  56899999999999999999888


Q ss_pred             ccEEecCCCcccHH
Q 022414          264 GPINIGNPGEFTML  277 (297)
Q Consensus       264 ~~~~i~~~~~~s~~  277 (297)
                      +.|++++++.+++.
T Consensus       199 ~~~~i~~~~~~~~~  212 (215)
T 2a35_A          199 GVRFVESDELRKLG  212 (215)
T ss_dssp             EEEEEEHHHHHHHH
T ss_pred             CceEEcHHHHHHhh
Confidence            89999887665543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.95  E-value=1e-27  Score=196.28  Aligned_cols=222  Identities=17%  Similarity=0.148  Sum_probs=163.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYH  103 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~  103 (297)
                      ++|+|+||||+|+||+++++.|+++  | ++|++++|+...    ....  ..++.++.+|+++..     +.++|+|||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g-~~V~~~~r~~~~----~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   75 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDK-FVAKGLVRSAQG----KEKI--GGEADVFIGDITDADSINPAFQGIDALVI   75 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTT-CEEEEEESCHHH----HHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCC-cEEEEEEcCCCc----hhhc--CCCeeEEEecCCCHHHHHHHHcCCCEEEE
Confidence            4789999999999999999999999  7 999999996422    2211  246778899998852     457999999


Q ss_pred             ccCCCCCcc-------------cccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414          104 LACPASPIF-------------YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus       104 ~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      +||......             ..++....+++|+.++.++++++++.++ +||++||..++...             .+
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~-------------~~  142 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD-------------HP  142 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT-------------CG
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC-------------Cc
Confidence            998653211             1122335679999999999999999998 89999998764211             11


Q ss_pred             CCC--CChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          170 IGV--RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       170 ~~~--~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      ..+  ...|..+|..+|.+++.    .+++++++||+.+||+......  +        ..+....+.+   ...+++++
T Consensus       143 ~~~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~--~--------~~~~~~~~~~---~~~~~~~~  205 (253)
T 1xq6_A          143 LNKLGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRE--L--------LVGKDDELLQ---TDTKTVPR  205 (253)
T ss_dssp             GGGGGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSC--E--------EEESTTGGGG---SSCCEEEH
T ss_pred             cccccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchhh--h--------hccCCcCCcC---CCCcEEcH
Confidence            111  13588899999998753    6899999999999998642210  0        0000001111   12468999


Q ss_pred             HHHHHHHHHHHhcCC--CccEEecCCC---cccHHHHHHHHHHhhcc
Q 022414          248 SDMVDGLIRLMEGEN--TGPINIGNPG---EFTMLELAENVKEVNFY  289 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~--~~~~~i~~~~---~~s~~e~~~~i~~~~g~  289 (297)
                      +|+|++++.+++++.  ++.|++++++   .+++.|+++.+.+.+|.
T Consensus       206 ~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          206 ADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             HHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            999999999998865  5589999864   59999999999998875

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.95  E-value=8e-28  Score=201.99  Aligned_cols=226  Identities=17%  Similarity=0.155  Sum_probs=167.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~  106 (297)
                      +|+|+||||||++|+++++.|+++|.++|++++|+......   ..+...+++++.+|++|.     .+.++|+|||+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~---~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   81 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA---KELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN   81 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH---HHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH---HHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence            58999999999999999999999865799999997533211   111124688999999886     3457999999996


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      ....        .....|+..+.+++++|++.|+ +||++|+..+++...      .        .+...|..+|..+|+
T Consensus        82 ~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~------~--------~~~~~y~~sK~~~e~  139 (299)
T 2wm3_A           82 YWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA------G--------RLAAAHFDGKGEVEE  139 (299)
T ss_dssp             HHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT------T--------SCCCHHHHHHHHHHH
T ss_pred             CCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC------C--------cccCchhhHHHHHHH
Confidence            4210        0135678899999999999998 899988877765321      1        123579999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHH-HHcCCCeEE-ecCCceeEeeeeHHHHHHHHHHHHhcCC-
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQ-AIRGEPLTV-QAPGTQTRSFCYVSDMVDGLIRLMEGEN-  262 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~~~~~~-  262 (297)
                      +++.    .+++++++||+.+||+....        ++.. ...++...+ ...++..+++++++|+|++++.++.++. 
T Consensus       140 ~~~~----~gi~~~ilrp~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~  207 (299)
T 2wm3_A          140 YFRD----IGVPMTSVRLPCYFENLLSH--------FLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK  207 (299)
T ss_dssp             HHHH----HTCCEEEEECCEEGGGGGTT--------TCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH
T ss_pred             HHHH----CCCCEEEEeecHHhhhchhh--------cCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh
Confidence            8864    58999999999999974210        1110 112222222 2346778999999999999999998752 


Q ss_pred             --CccEEecCCCcccHHHHHHHHHHhhcccCceee
Q 022414          263 --TGPINIGNPGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       263 --~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                        ++.|++++ +.+|+.|+++.+.+.+|.+.++..
T Consensus       208 ~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~  241 (299)
T 2wm3_A          208 YVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAK  241 (299)
T ss_dssp             HTTCEEECCS-EEECHHHHHHHHHHHHSSCEEECC
T ss_pred             hCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEe
Confidence              56899886 689999999999999998765543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.95  E-value=3.1e-27  Score=202.52  Aligned_cols=223  Identities=12%  Similarity=0.102  Sum_probs=164.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecc-cCCcc-----cCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD-VTEPL-----LIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~-----~~~~d~vi~~a  105 (297)
                      +|+|+|||||||||+++++.|+++| ++|++++|+.....  ...+....+++++.+| +++..     +.++|+|||++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~--~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a   81 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVHSLKGLI--AEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT   81 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCSCSHH--HHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCCChhh--HHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcC
Confidence            6899999999999999999999999 99999999654321  0112122478899999 88753     45799999998


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecce--eecCCCCCCCCCCCCCCCCCCCCCChHHHhHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSE--VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR  181 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~--~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (297)
                      +....           ..|..+ .+++++|++.+ + +|||+||..  .|+.                 .+...|+.+|.
T Consensus        82 ~~~~~-----------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------------~~~~~y~~sK~  132 (352)
T 1xgk_A           82 TSQAG-----------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------------WPAVPMWAPKF  132 (352)
T ss_dssp             CSTTS-----------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------------CCCCTTTHHHH
T ss_pred             CCCCc-----------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----------------CCCccHHHHHH
Confidence            64310           235555 99999999999 8 899999986  2211                 12256999999


Q ss_pred             HHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHH-HcCCCe--EEecCCceeEeeeeH-HHHHHHHHHH
Q 022414          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA-IRGEPL--TVQAPGTQTRSFCYV-SDMVDGLIRL  257 (297)
Q Consensus       182 ~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~i~v-~Dva~~~~~~  257 (297)
                      ++|++++.    .+++++++||+ +||++......    .++... ......  .+.+++++.++++++ +|+|++++.+
T Consensus       133 ~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~  203 (352)
T 1xgk_A          133 TVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPY----PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQI  203 (352)
T ss_dssp             HHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSC----SSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHH----cCCCEEEEecc-eecCCchhccc----ccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHH
Confidence            99999865    48999999986 68876422100    001000 122222  345667888999999 8999999999


Q ss_pred             HhcC----CCccEEecCCCcccHHHHHHHHHHhhcccCceeec
Q 022414          258 MEGE----NTGPINIGNPGEFTMLELAENVKEVNFYLGRLLVC  296 (297)
Q Consensus       258 ~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  296 (297)
                      ++++    .++.|++++ +.+|+.|+++.+.+.+|.+.+++.+
T Consensus       204 l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~v  245 (352)
T 1xgk_A          204 FKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQV  245 (352)
T ss_dssp             HHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEEC
T ss_pred             HhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEEC
Confidence            9876    367999995 6899999999999999998665543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=1.7e-27  Score=201.29  Aligned_cols=227  Identities=15%  Similarity=0.154  Sum_probs=165.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhh--hcCCCceEEEecccCCc-----ccCCcCEEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRK--WIGHPRFELIRHDVTEP-----LLIEVDQIYH  103 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~--~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~  103 (297)
                      +|+|+||||||++|+++++.|+++| ++|++++|+.... .+....  .+...+++++.+|+.+.     .+.++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   82 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   82 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence            5889999999999999999999999 9999999975432 111111  12235789999999885     3458999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC-CChHHHhH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGK  180 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~sK  180 (297)
                      +++....           ..|+.++.+++++|++.| + |||+ |   +|+......   +     .+..| ...| .+|
T Consensus        83 ~a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~-----~~~~p~~~~y-~sK  138 (313)
T 1qyd_A           83 ALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---E-----HALQPGSITF-IDK  138 (313)
T ss_dssp             CCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---C-----CCCSSTTHHH-HHH
T ss_pred             CCccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---c-----cCCCCCcchH-HHH
Confidence            9986532           125778899999999999 8 7774 3   344321111   1     22233 3467 999


Q ss_pred             HHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHH----HHcCCCeEEecCCceeEeeeeHHHHHHHHHH
Q 022414          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQ----AIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       181 ~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      ..+|++++    +.+++++++||+.++|+...        .+...    ...++.+.++++++..+++++++|+|++++.
T Consensus       139 ~~~e~~~~----~~g~~~~ilrp~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~  206 (313)
T 1qyd_A          139 RKVRRAIE----AASIPYTYVSSNMFAGYFAG--------SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIK  206 (313)
T ss_dssp             HHHHHHHH----HTTCCBCEEECCEEHHHHTT--------TSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHH----hcCCCeEEEEeceecccccc--------ccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHH
Confidence            99999875    35899999999998874311        11110    1123334556778889999999999999999


Q ss_pred             HHhcCC--CccEEecCC-CcccHHHHHHHHHHhhcccCceee
Q 022414          257 LMEGEN--TGPINIGNP-GEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       257 ~~~~~~--~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      +++++.  ++.|++.++ +.+|+.|+++.+.+.+|.+.++..
T Consensus       207 ~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~  248 (313)
T 1qyd_A          207 SIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIY  248 (313)
T ss_dssp             HTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECC
T ss_pred             HHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEE
Confidence            998875  567888765 689999999999999998866543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.94  E-value=1.2e-27  Score=199.11  Aligned_cols=233  Identities=16%  Similarity=0.076  Sum_probs=166.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+.... . ...+.++++|+++...            .+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAG-DTVIGTARRTEALDDLVAA-Y-PDRAEAISLDVTDGERIDVVAADVLARYGR   79 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHH-C-TTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHh-c-cCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            457899999999999999999999999 9999999965433322221 2 2478999999998621            26


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHH----HHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIG----TLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||......    ..+++...+++|+.+    ++.++..+++.+. ++|++||...+                .
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----------------~  143 (281)
T 3m1a_A           80 VDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQ----------------L  143 (281)
T ss_dssp             CSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------------C
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc----------------C
Confidence            999999999754322    234466788999999    5555555566776 89999998765                2


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC-------hhHHHHHH--HHHHcCCCeEEec
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-------GRVVSNFI--AQAIRGEPLTVQA  236 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~-------~~~~~~~~--~~~~~~~~~~~~~  236 (297)
                      +..+...|+.+|.+.|.+.+.++.+   .++++++++||.++++......       ..+.....  ......       
T Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  216 (281)
T 3m1a_A          144 SFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQG-------  216 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-------
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhh-------
Confidence            3445578999999999999998877   6899999999999887643211       11111111  111111       


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                        .....+++++|+|++++.+++++. ++.|+++++......+....+.+.++..
T Consensus       217 --~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~~~  269 (281)
T 3m1a_A          217 --SDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELTEW  269 (281)
T ss_dssp             -------CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHHHT
T ss_pred             --ccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHHHH
Confidence              122457889999999999999887 6678888876667777777777766543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.94  E-value=1.5e-26  Score=196.00  Aligned_cols=221  Identities=17%  Similarity=0.196  Sum_probs=163.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a~  106 (297)
                      +++|+||||||++|+++++.|+++| ++|++++|+.....+.+..+ ...+++++.+|++|.     .+.++|+|||+++
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~   88 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRPNSSKTTLLDEF-QSLGAIIVKGELDEHEKLVELMKKVDVVISALA   88 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECTTCSCHHHHHHH-HHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCC-CcEEEEECCCCchhhHHHHh-hcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            3589999999999999999999999 99999999764222222211 224789999999885     3458999999997


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC-CChHHHhHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVA  183 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~sK~~~  183 (297)
                      ...               +..+.+++++|++.| + +||+ |+   |+...    .+.     .+..| ...| .+|..+
T Consensus        89 ~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~~~-----~~~~p~~~~y-~sK~~~  139 (318)
T 2r6j_A           89 FPQ---------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVEE----DRI-----NALPPFEALI-ERKRMI  139 (318)
T ss_dssp             GGG---------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSCT----TTC-----CCCHHHHHHH-HHHHHH
T ss_pred             hhh---------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccCc----ccc-----cCCCCcchhH-HHHHHH
Confidence            431               446789999999998 8 6763 43   44221    111     22222 2457 999999


Q ss_pred             HHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-
Q 022414          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-  262 (297)
Q Consensus       184 e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-  262 (297)
                      |+++++    .+++++++||+.+++.        ++..+......+..+.+.++++..+++++++|+|++++.+++++. 
T Consensus       140 e~~~~~----~~~~~~~lr~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~  207 (318)
T 2r6j_A          140 RRAIEE----ANIPYTYVSANCFASY--------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA  207 (318)
T ss_dssp             HHHHHH----TTCCBEEEECCEEHHH--------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG
T ss_pred             HHHHHh----cCCCeEEEEcceehhh--------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc
Confidence            988753    5899999999877652        333333322344556677888889999999999999999998765 


Q ss_pred             -CccEEecCC-CcccHHHHHHHHHHhhcccCceee
Q 022414          263 -TGPINIGNP-GEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       263 -~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                       ++.|++.++ +.+|+.|+++.+.+.+|.+.++..
T Consensus       208 ~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~  242 (318)
T 2r6j_A          208 LNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIH  242 (318)
T ss_dssp             TTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEE
T ss_pred             cCeEEEecCCCCccCHHHHHHHHHHHhCCCCceee
Confidence             567888754 789999999999999998876554

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=1.4e-26  Score=196.37  Aligned_cols=223  Identities=15%  Similarity=0.177  Sum_probs=163.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC-CCCc-cchhh--hcCCCceEEEecccCCc-----ccCCcCEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSK-DNLRK--WIGHPRFELIRHDVTEP-----LLIEVDQI  101 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~-~~~~~--~~~~~~~~~~~~Dl~~~-----~~~~~d~v  101 (297)
                      ++|+|+||||||++|+++++.|+++| ++|++++|+. .... +....  .+...+++++.+|++|.     .+.++|+|
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~v   81 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIV   81 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence            36889999999999999999999999 9999999975 2111 11111  11235789999999886     34579999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC-CChHHH
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDE  178 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~  178 (297)
                      ||+++...               +..+.+++++|++.| + +|| .|   +|+...    ++.     .+..| .+.| .
T Consensus        82 i~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v-~S---~~g~~~----~~~-----~~~~p~~~~y-~  132 (321)
T 3c1o_A           82 ISALPFPM---------------ISSQIHIINAIKAAGNIKRFL-PS---DFGCEE----DRI-----KPLPPFESVL-E  132 (321)
T ss_dssp             EECCCGGG---------------SGGGHHHHHHHHHHCCCCEEE-CS---CCSSCG----GGC-----CCCHHHHHHH-H
T ss_pred             EECCCccc---------------hhhHHHHHHHHHHhCCccEEe-cc---ccccCc----ccc-----ccCCCcchHH-H
Confidence            99997431               456789999999998 8 676 23   344221    111     12222 3568 9


Q ss_pred             hHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHH---HHHcCCCeEEecCCceeEeeeeHHHHHHHHH
Q 022414          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIA---QAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (297)
Q Consensus       179 sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  255 (297)
                      +|..+|.+++    ..+++++++||+.++++        +...+..   ....++.+.++++++..+++++++|+|++++
T Consensus       133 sK~~~e~~~~----~~~~~~~~lrp~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (321)
T 3c1o_A          133 KKRIIRRAIE----AAALPYTYVSANCFGAY--------FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTI  200 (321)
T ss_dssp             HHHHHHHHHH----HHTCCBEEEECCEEHHH--------HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHH----HcCCCeEEEEeceeccc--------cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHH
Confidence            9999998875    35899999999888763        2222221   1123445677788889999999999999999


Q ss_pred             HHHhcCC--CccEEecC-CCcccHHHHHHHHHHhhcccCceee
Q 022414          256 RLMEGEN--TGPINIGN-PGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       256 ~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      .++.++.  ++.|++.+ ++.+|+.|+++.+.+.+|.+.++..
T Consensus       201 ~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~  243 (321)
T 3c1o_A          201 KVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVH  243 (321)
T ss_dssp             HHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEE
T ss_pred             HHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeee
Confidence            9998865  55788876 4789999999999999998876554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.94  E-value=3e-26  Score=193.08  Aligned_cols=225  Identities=16%  Similarity=0.159  Sum_probs=162.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC-CCCc--cchh--hhcCCCceEEEecccCCc-----ccCCcCEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSK--DNLR--KWIGHPRFELIRHDVTEP-----LLIEVDQI  101 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~--~~~~--~~~~~~~~~~~~~Dl~~~-----~~~~~d~v  101 (297)
                      +|+|+||||||+||+++++.|+++| ++|++++|+. ....  +...  ..+...+++++.+|+.+.     .+.++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v   80 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAG-NPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCC-CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence            5889999999999999999999999 9999999975 2111  1111  111224788999999886     34589999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC-CChHHH
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDE  178 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~  178 (297)
                      ||+++...               +.++.+++++|++.| + +||+ |   +|+...    .+.     .+..| .+.| .
T Consensus        81 i~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~-----~~~~p~~~~y-~  131 (307)
T 2gas_A           81 ICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRH-----DAVEPVRQVF-E  131 (307)
T ss_dssp             EECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSC-----CCCTTHHHHH-H
T ss_pred             EECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccCc----ccc-----cCCCcchhHH-H
Confidence            99998542               446789999999998 7 6763 3   344221    111     22233 3568 9


Q ss_pred             hHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHH
Q 022414          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (297)
Q Consensus       179 sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  258 (297)
                      +|..+|.+++    ..+++++++||+.++++....    +.. .......+..+.+.++++..+++++++|+|++++.++
T Consensus       132 sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  202 (307)
T 2gas_A          132 EKASIRRVIE----AEGVPYTYLCCHAFTGYFLRN----LAQ-LDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA  202 (307)
T ss_dssp             HHHHHHHHHH----HHTCCBEEEECCEETTTTGGG----TTC-TTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH----HcCCCeEEEEcceeecccccc----ccc-cccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHH
Confidence            9999998875    358999999999998864211    000 0000113334566678888999999999999999999


Q ss_pred             hcCC--CccEEecCC-CcccHHHHHHHHHHhhcccCceee
Q 022414          259 EGEN--TGPINIGNP-GEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       259 ~~~~--~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      .++.  ++.|++.++ +.+|+.|+++.+.+.+|.+.++..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~  242 (307)
T 2gas_A          203 NDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTY  242 (307)
T ss_dssp             TCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEE
T ss_pred             cCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceee
Confidence            8765  567888764 689999999999999998876543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.94  E-value=1.2e-25  Score=186.76  Aligned_cols=235  Identities=16%  Similarity=0.125  Sum_probs=168.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------C
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ...+|+|+||||+|+||+++++.|+++| ++|++++|+.....+....+....++.++.+|+++...            .
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYG-AKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3467999999999999999999999999 99999998643222211112112268899999998631            2


Q ss_pred             CcCEEEEccCCCCCc------ccccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ++|++||+||.....      ...+++...+++|+.++.++++++.+    .+. ++|++||...+...           
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------  160 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG-----------  160 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC-----------
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC-----------
Confidence            699999999975421      12244567889999999999998866    355 89999998876421           


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                          ..+...|+.+|.+.+.+++.++.+   .+++++++||+.++++........ .......+.....       ....
T Consensus       161 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~-------~~~~  228 (278)
T 2bgk_A          161 ----EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-DSSRVEELAHQAA-------NLKG  228 (278)
T ss_dssp             ----TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-CHHHHHHHHHHTC-------SSCS
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc-chhHHHHhhhccc-------cccc
Confidence                113457999999999999988876   589999999999999864321110 0111222211111       1112


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccHHHHHHHHHHhh
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKEVN  287 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~  287 (297)
                      .+++++|+|++++.++..+.    +..|++.+|..+++.|+++.+.+.+
T Consensus       229 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          229 TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             ccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            47899999999999997542    4578999999999999999887654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.94  E-value=3.4e-25  Score=175.75  Aligned_cols=195  Identities=12%  Similarity=0.085  Sum_probs=145.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~a~  106 (297)
                      .|+|+||||||+||+++++.|+++| ++|++++|+......     ....+++++.+|+++..     +.++|+|||++|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   76 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLPS-----EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG   76 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGSCS-----SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeChhhccc-----ccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence            3899999999999999999999999 999999997543221     11357889999998863     457999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      ....    .++   .+.|+.++.++++++++.++ +||++||..+|+.....            ..+...|+.+|...|.
T Consensus        77 ~~~~----~~~---~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~------------~~~~~~y~~~K~~~e~  137 (206)
T 1hdo_A           77 TRND----LSP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------------PPRLQAVTDDHIRMHK  137 (206)
T ss_dssp             CTTC----CSC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------------CGGGHHHHHHHHHHHH
T ss_pred             CCCC----CCc---cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc------------cccchhHHHHHHHHHH
Confidence            6543    111   14789999999999999998 89999999888643211            1145679999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--C
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~  263 (297)
                      +++    ..+++++++||+.+ ++.....               ........... .++++++|+|++++.+++++.  +
T Consensus       138 ~~~----~~~i~~~~lrp~~~-~~~~~~~---------------~~~~~~~~~~~-~~~i~~~Dva~~~~~~~~~~~~~g  196 (206)
T 1hdo_A          138 VLR----ESGLKYVAVMPPHI-GDQPLTG---------------AYTVTLDGRGP-SRVISKHDLGHFMLRCLTTDEYDG  196 (206)
T ss_dssp             HHH----HTCSEEEEECCSEE-ECCCCCS---------------CCEEESSSCSS-CSEEEHHHHHHHHHHTTSCSTTTT
T ss_pred             HHH----hCCCCEEEEeCCcc-cCCCCCc---------------ceEecccCCCC-CCccCHHHHHHHHHHHhcCccccc
Confidence            874    46899999999997 3331110               00011111110 479999999999999999876  5


Q ss_pred             ccEEecCCC
Q 022414          264 GPINIGNPG  272 (297)
Q Consensus       264 ~~~~i~~~~  272 (297)
                      +.|+++++.
T Consensus       197 ~~~~i~~g~  205 (206)
T 1hdo_A          197 HSTYPSHQY  205 (206)
T ss_dssp             CEEEEECCC
T ss_pred             cceeeeccc
Confidence            689998764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.94  E-value=1.6e-25  Score=182.16  Aligned_cols=202  Identities=14%  Similarity=0.040  Sum_probs=150.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCC--eEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi  102 (297)
                      +.+|+|+||||+|+||+++++.|+++| +  +|++++|+.....+..     ..++.++.+|+++..     ..++|+||
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G-~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi   89 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQGHDVGF   89 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGSSCSEEE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCC-CCCEEEEEEcCCCCccccc-----cCCceEEecCcCCHHHHHHHhcCCCEEE
Confidence            457899999999999999999999999 7  9999999754332211     136788899998753     34799999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR  181 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (297)
                      ||||....   ..++...+++|+.++.++++++++.++ +||++||..+|+.                  +...|+.+|.
T Consensus        90 ~~ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------------------~~~~Y~~sK~  148 (242)
T 2bka_A           90 CCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------------SNFLYLQVKG  148 (242)
T ss_dssp             ECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHH
T ss_pred             ECCCcccc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC------------------CcchHHHHHH
Confidence            99986432   223567889999999999999999998 8999999988742                  1256999999


Q ss_pred             HHHHHHHHHHHHhCC-cEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhc
Q 022414          182 VAETLMFDYHRQHGI-EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       182 ~~e~~~~~~~~~~~~-~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                      +.|.+++.    .++ +++++||+.+||+....   .....+........+. .++.    ..+++++|+|++++.++++
T Consensus       149 ~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~---~~~~~~~~~~~~~~~~-~~~~----~~~~~~~dva~~~~~~~~~  216 (242)
T 2bka_A          149 EVEAKVEE----LKFDRYSVFRPGVLLCDRQES---RPGEWLVRKFFGSLPD-SWAS----GHSVPVVTVVRAMLNNVVR  216 (242)
T ss_dssp             HHHHHHHT----TCCSEEEEEECCEEECTTGGG---SHHHHHHHHHHCSCCT-TGGG----GTEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHh----cCCCCeEEEcCceecCCCCCC---cHHHHHHHHhhcccCc-cccC----CcccCHHHHHHHHHHHHhC
Confidence            99998754    467 59999999999997422   1223333333322211 1111    2489999999999999998


Q ss_pred             CC-CccEEecC
Q 022414          261 EN-TGPINIGN  270 (297)
Q Consensus       261 ~~-~~~~~i~~  270 (297)
                      +. .+.+++.+
T Consensus       217 ~~~~~~~~~~~  227 (242)
T 2bka_A          217 PRDKQMELLEN  227 (242)
T ss_dssp             CCCSSEEEEEH
T ss_pred             ccccCeeEeeH
Confidence            87 45555543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=1.3e-26  Score=195.37  Aligned_cols=225  Identities=15%  Similarity=0.188  Sum_probs=163.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC--ccchh--hhcCCCceEEEecccCCc-----ccCCcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--KDNLR--KWIGHPRFELIRHDVTEP-----LLIEVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~--~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi  102 (297)
                      +|+|+||||||++|+++++.|+++| ++|++++|+....  .+...  ..+...+++++.+|++|.     .+.++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence            5889999999999999999999999 9999999975432  11111  112245789999999886     344799999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC-CChHHHh
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEG  179 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~s  179 (297)
                      |+++...               +.++.+++++|++.| + +||+ |+   |+...    .+.     .+..| ...| .+
T Consensus        83 ~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~~~-----~~~~p~~~~y-~s  133 (308)
T 1qyc_A           83 STVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SE---FGNDV----DNV-----HAVEPAKSVF-EV  133 (308)
T ss_dssp             ECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT----TSC-----CCCTTHHHHH-HH
T ss_pred             ECCcchh---------------hhhHHHHHHHHHhcCCCceEee-cc---cccCc----ccc-----ccCCcchhHH-HH
Confidence            9997431               446789999999998 8 6763 43   44221    111     22333 3467 99


Q ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHh
Q 022414          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (297)
Q Consensus       180 K~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  259 (297)
                      |..+|+++++    .+++++++||+.++|+.....    .. .......++.+.+.++++..+++++++|+|++++.+++
T Consensus       134 K~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  204 (308)
T 1qyc_A          134 KAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSL----AQ-AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD  204 (308)
T ss_dssp             HHHHHHHHHH----HTCCBEEEECCEEHHHHTTTT----TC-TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred             HHHHHHHHHh----cCCCeEEEEeceecccccccc----cc-ccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh
Confidence            9999988753    589999999999887532110    00 00001233456677888899999999999999999998


Q ss_pred             cCC--CccEEecCC-CcccHHHHHHHHHHhhcccCceee
Q 022414          260 GEN--TGPINIGNP-GEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       260 ~~~--~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      ++.  ++.|++.++ +.+|+.|+++.+.+.+|.+.++..
T Consensus       205 ~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~  243 (308)
T 1qyc_A          205 DPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAY  243 (308)
T ss_dssp             CGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEE
T ss_pred             CccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEe
Confidence            765  567888764 689999999999999998876554

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.93  E-value=2.5e-25  Score=182.50  Aligned_cols=219  Identities=14%  Similarity=0.095  Sum_probs=159.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc------------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------   95 (297)
                      ...+|+|+||||+|+||+++++.|+++| ++|++++|+.....+....+. ...++.++.+|+++...            
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAG-ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            3567999999999999999999999999 999999996432221111111 12468889999998621            


Q ss_pred             CCcCEEEEccCCCCCcc---cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      .++|+|||+||......   ..+++...+++|+.++.++++++.    +.+. ++|++||...+.               
T Consensus        87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------  151 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN---------------  151 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC---------------
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC---------------
Confidence            27999999999765422   234466788999999999988874    4565 899999987753               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +..+...|+.+|.+.|.+++.++.+.   +++++++||+.++++.....   ..+.+......+.++         ..+
T Consensus       152 -~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~---------~~~  218 (255)
T 1fmc_A          152 -KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV---ITPEIEQKMLQHTPI---------RRL  218 (255)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CCHHHHHHHHHTCSS---------CSC
T ss_pred             -CCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc---cChHHHHHHHhcCCc---------ccC
Confidence             22345679999999999999888664   79999999999998742211   112233333333322         246


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCcccH
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~  276 (297)
                      ++++|+|++++.++..+.    ++.|++++|..+|+
T Consensus       219 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          219 GQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             CCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            799999999999997642    44899999887764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.93  E-value=1.9e-24  Score=176.07  Aligned_cols=213  Identities=20%  Similarity=0.149  Sum_probs=152.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~v  101 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+ +.+.  ..+++++.+|+++..        ..++|+|
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASG-AKVVAVTRTNSDLVS-LAKE--CPGIEPVCVDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHH--STTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHh--ccCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence            467999999999999999999999999 999999986432211 1111  135677899998762        2258999


Q ss_pred             EEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc----C-C-eEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414          102 YHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus       102 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      ||+||......    ..+++...+++|+.++.++++++.+.    + . ++|++||...+.                +..
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~  144 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV----------------TFP  144 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CCT
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC----------------CCC
Confidence            99999765322    22345668899999999988887553    4 4 899999988763                223


Q ss_pred             CCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHH
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  248 (297)
                      +...|+.+|.+.|.+++.++.+   .+++++++||+.++++.....  .....++..+..+.++         .++++++
T Consensus       145 ~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~  213 (244)
T 1cyd_A          145 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV--SADPEFARKLKERHPL---------RKFAEVE  213 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH--TCCHHHHHHHHHHSTT---------SSCBCHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc--ccCHHHHHHHHhcCCc---------cCCCCHH
Confidence            3467999999999999998876   479999999999998752100  0001222333332221         3689999


Q ss_pred             HHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          249 DMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       249 Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      |+|++++.+++.+.    ++.+++.+|..
T Consensus       214 dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          214 DVVNSILFLLSDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             HHHHHHHHHhCchhhcccCCEEEECCCcc
Confidence            99999999998653    34677777643

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.92  E-value=6.8e-25  Score=180.24  Aligned_cols=222  Identities=17%  Similarity=0.098  Sum_probs=157.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+.....  ...+.++++|+++..            ..+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   82 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREG-ATVAIADIDIERARQAAAEI--GPAAYAVQMDVTRQDSIDAAIAATVEHAGG   82 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh--CCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 99999998643322222222  246789999999862            127


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +|++|||||......    ..+++...+++|+.++..+++++.+    .+  .++|++||...+.               
T Consensus        83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  147 (259)
T 4e6p_A           83 LDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR---------------  147 (259)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS---------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc---------------
Confidence            999999999765433    2345667788999999999988754    23  3899999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCC---CeEEecCCcee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE---PLTVQAPGTQT  241 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  241 (297)
                       +......|+.+|.+.+.+.+.++.+.   +++++.++||.++++..     .....+........   ......+....
T Consensus       148 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~  221 (259)
T 4e6p_A          148 -GEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHW-----DGVDALFARYENRPRGEKKRLVGEAVPF  221 (259)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTH-----HHHHHHHHHHHTCCTTHHHHHHHHHSTT
T ss_pred             -CCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchh-----hhhhhhhhhhccCChHHHHHHHhccCCC
Confidence             33345679999999999999988764   79999999999999862     11111111111110   00001111223


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      .++++++|+|+++++++....    +..+++.+|..+|
T Consensus       222 ~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          222 GRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             SSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             CCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence            468899999999999987543    4588998886653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.92  E-value=2.7e-24  Score=178.81  Aligned_cols=236  Identities=16%  Similarity=0.062  Sum_probs=170.8

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC----CceEEEecccCCccc--------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLL--------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~--------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+...    ..+.++++|+++...        
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAG-ASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            44568999999999999999999999999 99999998654332222222111    268889999998631        


Q ss_pred             ----CCcCEEEEccCCCCC-c----ccccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCC
Q 022414           96 ----IEVDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        96 ----~~~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                          .++|++|||||.... .    ...+++...+++|+.++..+++++.+    .+. ++|++||...+.         
T Consensus        86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------  156 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN---------  156 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS---------
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC---------
Confidence                268999999996322 1    12344567889999999999988744    333 899999988762         


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                             +......|+.+|.+.+.+.+.++.+.   +++++.++||.++++.....  ..............++      
T Consensus       157 -------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~p~------  221 (281)
T 3svt_A          157 -------THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI--TESAELSSDYAMCTPL------  221 (281)
T ss_dssp             -------CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--HTCHHHHHHHHHHCSS------
T ss_pred             -------CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc--ccCHHHHHHHHhcCCC------
Confidence                   33345789999999999999988764   59999999999998753110  0001222222222222      


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc-HHHHHHHHHHhhcccC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT-MLELAENVKEVNFYLG  291 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s-~~e~~~~i~~~~g~~~  291 (297)
                         ..+.+++|+|+++++++....    +..+++.+|..++ ..++.+.+.+.+|.+.
T Consensus       222 ---~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          222 ---PRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             ---CCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence               246789999999999997643    4578998888776 7788999999988764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.92  E-value=1.5e-23  Score=173.30  Aligned_cols=212  Identities=17%  Similarity=0.090  Sum_probs=157.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+.....  ..++.++.+|+++..            ..
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAG-ARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999 99999999754433322222  246888999999862            12


Q ss_pred             CcCEEEEccCCCCC-c-----ccccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASP-I-----FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        97 ~~d~vi~~a~~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ++|++||+||.... .     ...+++...+++|+.++..+++++    ++.+. ++|++||...+.             
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-------------  151 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA-------------  151 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-------------
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC-------------
Confidence            69999999997632 1     133446678999999999999998    56666 899999987652             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                         +..+...|+.+|.+.+.+.+.++.+   .+++++.++||.++++.....   ........+....+.         .
T Consensus       152 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~---------~  216 (271)
T 3tzq_B          152 ---AYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVG---LPQPIVDIFATHHLA---------G  216 (271)
T ss_dssp             ---BCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC------CHHHHHHHHTTSTT---------S
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccccc---CCHHHHHHHHhcCCC---------C
Confidence               3334467999999999999998877   589999999999999874321   112223333333222         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      .+..++|+|+++++++....    +..+++.+|
T Consensus       217 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          217 RIGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            36789999999999998653    447788877

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.92  E-value=7.5e-25  Score=184.11  Aligned_cols=235  Identities=11%  Similarity=0.002  Sum_probs=166.9

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~----------   95 (297)
                      ....+|+|+||||+|+||+++++.|+++| ++|++++|+.....+....+..  ..++.++.+|+++...          
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLG-AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            34567999999999999999999999999 9999999964322221111110  2468899999998631          


Q ss_pred             --CCcCEEEEccCCCCCc----ccccChhhhHHHhHHHHHHHHHHHHH-----cCC-eEEEEecceeecCCCCCCCCCCC
Q 022414           96 --IEVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKR-----VGA-RILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~-r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                        .++|++||+||.....    ...+++...+++|+.++..+++++.+     .+. ++|++||...+.           
T Consensus       101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------  169 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET-----------  169 (302)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH-----------
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc-----------
Confidence              2579999999965432    22345667889999999999887743     234 899999987653           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCCeEEecCCc
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                           +..+...|+.+|.+.+.+.+.++.+   .+++++++||+.++++...... ...  .....+....+.       
T Consensus       170 -----~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~p~-------  235 (302)
T 1w6u_A          170 -----GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG--TFEKEMIGRIPC-------  235 (302)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTS--HHHHHHHTTCTT-------
T ss_pred             -----CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccch--hhHHHHHhcCCc-------
Confidence                 2234467999999999999998877   6899999999999987421110 000  011122222221       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccHHHHHHHHHHhhccc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~  290 (297)
                        ..+++++|+|++++.++....    +..+++.+|..+++.++++.+.+..|..
T Consensus       236 --~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~  288 (302)
T 1w6u_A          236 --GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQ  288 (302)
T ss_dssp             --SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHH
T ss_pred             --CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcccc
Confidence              136789999999999997543    4478999988889999888887776654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.92  E-value=7.1e-24  Score=174.34  Aligned_cols=222  Identities=17%  Similarity=0.096  Sum_probs=157.5

Q ss_pred             cccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc-------
Q 022414           24 RFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL-------   95 (297)
Q Consensus        24 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~-------   95 (297)
                      .++.+...+|+|+||||+|+||+++++.|+++| ++|++++|+.....+....+. ...++.++++|+++...       
T Consensus         5 ~~~~~~l~~k~vlItGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (260)
T 3awd_A            5 YMEKLRLDNRVAIVTGGAQNIGLACVTALAEAG-ARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS   83 (260)
T ss_dssp             TTGGGCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            344455678999999999999999999999999 999999996432221111111 12468899999998631       


Q ss_pred             -----CCcCEEEEccCCCC-Ccc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCC
Q 022414           96 -----IEVDQIYHLACPAS-PIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        96 -----~~~d~vi~~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~  160 (297)
                           .++|+|||+||... ...    ..+++...+++|+.++.++++++.+    .+. ++|++||...+..       
T Consensus        84 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------  156 (260)
T 3awd_A           84 VHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV-------  156 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc-------
Confidence                 26999999999654 211    2233567889999999999888754    455 8999999875421       


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhH-HHHHHHHHHcCCCeEEec
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRV-VSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  236 (297)
                             .+..+...|+.+|.+.|.+++.++.+   .+++++++||+.++++....   .. .+.+...+..+.++    
T Consensus       157 -------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~----  222 (260)
T 3awd_A          157 -------NRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF---GMEKPELYDAWIAGTPM----  222 (260)
T ss_dssp             -------CSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH---HHTCHHHHHHHHHTCTT----
T ss_pred             -------CCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc---ccCChHHHHHHHhcCCc----
Confidence                   12223467999999999999998877   68999999999999986320   11 12233333333221    


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                           ..+++++|+|++++.++....    +..+++.+|.
T Consensus       223 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          223 -----GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             -----CCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence                 247899999999999997532    3478888764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.92  E-value=2e-25  Score=183.00  Aligned_cols=220  Identities=12%  Similarity=0.028  Sum_probs=150.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----c----CCcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----L----IEVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~----~~~d~vi  102 (297)
                      ||+|+||||+|+||+++++.|+++| ++|++++|+......            .+.+|+++..     .    .++|+||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~------------~~~~D~~~~~~~~~~~~~~~~~~d~vi   67 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAG-HTVIGIDRGQADIEA------------DLSTPGGRETAVAAVLDRCGGVLDGLV   67 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSSSSEEC------------CTTSHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeCChhHccc------------cccCCcccHHHHHHHHHHcCCCccEEE
Confidence            3689999999999999999999999 999999996532211            1456776541     1    3799999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc----CC-eEEEEecceeecCCCCCC-CCC-------CCCCC--C
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHP-QDE-------SYWGN--V  167 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~v~~Ss~~~~~~~~~~~-~~e-------~~~~~--~  167 (297)
                      |+||....   ..++...+++|+.++.++++++.+.    +. ++|++||..+++...... ..|       +....  .
T Consensus        68 ~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (255)
T 2dkn_A           68 CCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAE  144 (255)
T ss_dssp             ECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHH
T ss_pred             ECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhcc
Confidence            99986542   3457888999999999999987654    44 899999999886431110 000       00000  0


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHH-HHHHHHcCCCeEEecCCceeEe
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSN-FIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      +...+...|+.+|.+.|.+++.++.+   .+++++++||+.++|+..    ..+... .........     . + ...+
T Consensus       145 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~----~~~~~~~~~~~~~~~~-----~-~-~~~~  213 (255)
T 2dkn_A          145 QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL----QASKADPRYGESTRRF-----V-A-PLGR  213 (255)
T ss_dssp             HHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH----HHHHHCTTTHHHHHSC-----C-C-TTSS
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh----hhcccchhhHHHHHHH-----H-H-HhcC
Confidence            00134567999999999999888765   589999999999998741    111010 000111100     0 1 2236


Q ss_pred             eeeHHHHHHHHHHHHhcC---C-CccEEecCCCcccHHH
Q 022414          244 FCYVSDMVDGLIRLMEGE---N-TGPINIGNPGEFTMLE  278 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~---~-~~~~~i~~~~~~s~~e  278 (297)
                      +++++|+|++++.+++.+   . ++.|++++|..++++|
T Consensus       214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            899999999999999876   2 4589999887766544

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.92  E-value=4.6e-24  Score=175.20  Aligned_cols=208  Identities=14%  Similarity=0.107  Sum_probs=156.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....        ...+.++.+|+++...            
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRN-YRVVATSRSIKPSA--------DPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSCCCCS--------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChhhcc--------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            34568999999999999999999999999 99999999653321        2368899999998631            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+..             
T Consensus        95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------------  161 (260)
T 3un1_A           95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP-------------  161 (260)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC-------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC-------------
Confidence            26999999999765432    23446678899999999999887    45666 8999999776421             


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                       .+..+...|+.+|.+.+.+.+.++.+.   +++++.++||.++++.....       .........+         ...
T Consensus       162 -~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-------~~~~~~~~~p---------~~r  224 (260)
T 3un1_A          162 -MVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE-------THSTLAGLHP---------VGR  224 (260)
T ss_dssp             -BTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG-------GHHHHHTTST---------TSS
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH-------HHHHHhccCC---------CCC
Confidence             123344679999999999999998875   79999999999999864221       1111222222         124


Q ss_pred             eeeHHHHHHHHHHHHhcCC--CccEEecCCCcc
Q 022414          244 FCYVSDMVDGLIRLMEGEN--TGPINIGNPGEF  274 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~  274 (297)
                      +.+++|+|++++++.+...  +..+++.+|...
T Consensus       225 ~~~~~dva~av~~L~~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          225 MGEIRDVVDAVLYLEHAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             CBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHhcccCCCCCcEEEECCCeec
Confidence            6789999999999965554  457888887554

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.92  E-value=8.3e-24  Score=174.20  Aligned_cols=217  Identities=12%  Similarity=0.067  Sum_probs=155.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+..  ..++.++.+|+++...           
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEG-AHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3567999999999999999999999999 9999999964322211111111  2468889999998631           


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       .++|++||+||......    ..+++...+++|+.++..+++++.    +.+. ++|++||...+.             
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  149 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ-------------  149 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-------------
Confidence             26999999999764322    234466788999999988888774    4565 899999988763             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH-----------HHHHHHHHcC-C
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV-----------SNFIAQAIRG-E  230 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~-----------~~~~~~~~~~-~  230 (297)
                         +..+...|+.+|.+.+.+.+.++.+   .++++++++|+.++++...    ...           ......+... .
T Consensus       150 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
T 3ai3_A          150 ---PLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI----KTAKELTKDNGGDWKGYLQSVADEHA  222 (263)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH----HHHHHHTTTTTCCHHHHHHHHHHHHC
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh----hhhHhhhcccCCcHHHHHHHHHhcCC
Confidence               2233467999999999999988876   5899999999999987521    111           1111222111 1


Q ss_pred             CeEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      +         ...+++++|+|+++++++..+.    +..+++.+|..++
T Consensus       223 p---------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          223 P---------IKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             T---------TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             C---------CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            1         1247899999999999998653    4478888876654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.91  E-value=8.4e-24  Score=176.42  Aligned_cols=217  Identities=18%  Similarity=0.095  Sum_probs=158.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC--CceEEEecccCCcc------------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH--PRFELIRHDVTEPL------------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~------------   94 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+...  .++.++++|+++..            
T Consensus        38 ~l~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           38 DLSARSVLVTGGTKGIGRGIATVFARAG-ANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 99999999764433332222221  36889999999862            


Q ss_pred             cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ..++|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.             
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~-------------  183 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV-------------  183 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT-------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc-------------
Confidence            126899999999765432    33456678899999999999888    45555 999999976421             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        .+......|+.+|.+.+.+.+.++.+   .+++++.++||.++++...    .........+....++         .
T Consensus       184 --~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~p~---------~  248 (293)
T 3rih_A          184 --TGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV----DMGEEYISGMARSIPM---------G  248 (293)
T ss_dssp             --BBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH----HTCHHHHHHHHTTSTT---------S
T ss_pred             --CCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh----hccHHHHHHHHhcCCC---------C
Confidence              12223467999999999999988876   4899999999999987421    1112333334443332         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      .+..++|+|+++++++....    +..+++.+|..+
T Consensus       249 r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          249 MLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            35678999999999997543    457888887654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.91  E-value=2.9e-23  Score=169.07  Aligned_cols=214  Identities=17%  Similarity=0.129  Sum_probs=152.4

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQ  100 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~  100 (297)
                      ...+++|+||||+|+||+++++.|+++| ++|++++|+.....+ +...+  .+++++.+|+++..        ..++|+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~   79 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATG-ARVVAVSRTQADLDS-LVREC--PGIEPVCVDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHc--CCCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence            3567999999999999999999999999 999999986432211 11111  25677899998862        125899


Q ss_pred             EEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC-C-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      |||+||......    ..+++...+++|+.++..+++++.+    .+ . ++|++||...+.                +.
T Consensus        80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~  143 (244)
T 3d3w_A           80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----------------AV  143 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CC
T ss_pred             EEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc----------------CC
Confidence            999999765322    2234567889999999888888755    34 4 899999987652                23


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      .+...|+.+|.+.|.+++.++.+   .++++++++|+.++++.......  .......+....+         ..+++++
T Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~  212 (244)
T 3d3w_A          144 TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS--DPHKAKTMLNRIP---------LGKFAEV  212 (244)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSC--STTHHHHHHHTCT---------TCSCBCH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhcc--ChHHHHHHHhhCC---------CCCCcCH
Confidence            34567999999999999998876   47999999999999875310000  0011122222221         1257899


Q ss_pred             HHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          248 SDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      +|+|++++.++..+.    +..|++.+|..
T Consensus       213 ~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          213 EHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            999999999997642    44788887644

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=1.5e-23  Score=174.16  Aligned_cols=232  Identities=12%  Similarity=0.014  Sum_probs=151.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---c-CCCceEEEecccCCccc----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---I-GHPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~Dl~~~~~----------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+   . ...++.++.+|+++...          
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREG-AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999 99999999643222111111   1 11357889999998621          


Q ss_pred             --CCcCEEEEccCCCCCcc--------cccChhhhHHHhHHHHHHHHHHHHHc----CCeEEEEeccee-ecCCCCCCCC
Q 022414           96 --IEVDQIYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEV-YGDPLVHPQD  160 (297)
Q Consensus        96 --~~~d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~v~~Ss~~~-~~~~~~~~~~  160 (297)
                        .++|++|||||......        ..+++...+++|+.++..+++++.+.    +.++|++||... +.        
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~--------  154 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH--------  154 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS--------
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEeccccccc--------
Confidence              27999999999754322        33446678899999999999888653    568999999875 42        


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC---hhH--HHHHHHHHHcCCCe
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD---GRV--VSNFIAQAIRGEPL  232 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~---~~~--~~~~~~~~~~~~~~  232 (297)
                              +......|+.+|.+.+.+.+.++.+   .++++++++|+.++++......   ...  +......+....++
T Consensus       155 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  226 (278)
T 1spx_A          155 --------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA  226 (278)
T ss_dssp             --------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT
T ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC
Confidence                    2233467999999999999988765   5899999999999988632110   000  00001222111111


Q ss_pred             EEecCCceeEeeeeHHHHHHHHHHHHhcC----C-CccEEecCCCcccHHHHHHHHHHhh
Q 022414          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGE----N-TGPINIGNPGEFTMLELAENVKEVN  287 (297)
Q Consensus       233 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~----~-~~~~~i~~~~~~s~~e~~~~i~~~~  287 (297)
                               ..+++++|+|+++++++..+    . +..+++.+|..+++.++++.+.+++
T Consensus       227 ---------~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          227 ---------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             ---------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             ---------cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence                     14789999999999998753    2 4578899988999999999988764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.91  E-value=6.3e-24  Score=175.05  Aligned_cols=220  Identities=17%  Similarity=0.082  Sum_probs=149.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--------CCceEEEecccCCccc------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--------HPRFELIRHDVTEPLL------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~------   95 (297)
                      ..+++|+||||+|+||+++++.|+++| ++|++++|+.....+....+..        ..++.++.+|+++...      
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEG-ATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            357899999999999999999999999 9999999964322211111110        1357889999998631      


Q ss_pred             ------CCc-CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc----C-C-eEEEEecceeecCCCCCC
Q 022414           96 ------IEV-DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G-A-RILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        96 ------~~~-d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~-r~v~~Ss~~~~~~~~~~~  158 (297)
                            .++ |+|||+||......    ..+++...+++|+.++.++++++.+.    + . ++|++||...+.      
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------  157 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV------  157 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH------
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc------
Confidence                  134 99999999765322    23456678899999999999887653    4 3 899999986542      


Q ss_pred             CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEe
Q 022414          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (297)
                                +..+...|+.+|.+.+.+.+.++.+   .+++++++||+.++++....    ....+...+....+    
T Consensus       158 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~----  219 (264)
T 2pd6_A          158 ----------GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK----VPQKVVDKITEMIP----  219 (264)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------CTGGGCT----
T ss_pred             ----------CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh----cCHHHHHHHHHhCC----
Confidence                      2233467999999999999988876   68999999999999986321    11111111111111    


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccHHHH
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLEL  279 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~e~  279 (297)
                           ...+++++|+|++++.++..+.    +..+++.+|..++...+
T Consensus       220 -----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          220 -----MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             -----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             -----CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence                 1246799999999999997542    45788888776665544

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.91  E-value=4.3e-23  Score=169.30  Aligned_cols=216  Identities=17%  Similarity=0.130  Sum_probs=150.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------C
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+.....  ..++.++++|+++...            .
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEG-ATVLGLDLKPPAGEEPAAEL--GAAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3567999999999999999999999999 99999999765443332222  2467889999998621            2


Q ss_pred             CcCEEEEccCCCCCcc--------cccChhhhHHHhHHHHHHHHHHHHHc----------CC-eEEEEecceeecCCCCC
Q 022414           97 EVDQIYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAKRV----------GA-RILLTSTSEVYGDPLVH  157 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~-r~v~~Ss~~~~~~~~~~  157 (297)
                      ++|++|||||......        ..+++...+++|+.++..+++++.+.          +. ++|++||...+.     
T Consensus        81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~-----  155 (257)
T 3tpc_A           81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-----  155 (257)
T ss_dssp             CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-----
T ss_pred             CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc-----
Confidence            6999999999764322        23456778899999999999988653          33 799999988753     


Q ss_pred             CCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEE
Q 022414          158 PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV  234 (297)
Q Consensus       158 ~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (297)
                                 +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++....    .............++  
T Consensus       156 -----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~p~--  218 (257)
T 3tpc_A          156 -----------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG----MPQDVQDALAASVPF--  218 (257)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------CCSSS--
T ss_pred             -----------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc----CCHHHHHHHHhcCCC--
Confidence                       2234467999999999999988876   58999999999999875321    111111111111111  


Q ss_pred             ecCCceeEeeeeHHHHHHHHHHHHhcCC--CccEEecCCCccc
Q 022414          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFT  275 (297)
Q Consensus       235 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s  275 (297)
                            ...+.+++|+|++++++++...  +..+++.+|..++
T Consensus       219 ------~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          219 ------PPRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             ------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             ------CCCCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence                  0357899999999999998754  4578888876554

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.91  E-value=2e-23  Score=171.66  Aligned_cols=217  Identities=17%  Similarity=0.079  Sum_probs=157.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+..  ..++.++++|+++...           
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARAG-ANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 9999999965433222222211  1468899999998631           


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc----CC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       .++|++|||||......    ..+++...+++|+.++..+++++.+.    +. ++|++||.....             
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-------------  152 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI-------------  152 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT-------------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc-------------
Confidence             26999999999765432    23446667899999999998887553    55 899999976421             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        .+......|+.+|.+.+.+.+.++.+   .+++++.++||.++++......    ......+....++         .
T Consensus       153 --~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~p~---------~  217 (262)
T 3pk0_A          153 --TGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG----EEYIASMARSIPA---------G  217 (262)
T ss_dssp             --BCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC----HHHHHHHHTTSTT---------S
T ss_pred             --CCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC----HHHHHHHHhcCCC---------C
Confidence              12234467999999999999998877   5899999999999987532211    2233333333322         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      .+.+++|+|+++++++....    +..+++.+|..+
T Consensus       218 r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          218 ALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            36789999999999997653    447888887654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.91  E-value=1.5e-23  Score=173.06  Aligned_cols=216  Identities=16%  Similarity=0.067  Sum_probs=140.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc------------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------   95 (297)
                      ...+|+|+||||+|+||+++++.|+++| ++|++++|+.....+....+. ....+.++.+|+++...            
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFG-AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3567999999999999999999999999 999999986432222111111 12368889999987621            


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       .++|+|||+||......    ..+++...+++|+.++.++++++    ++.+. ++|++||...+.             
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------------  156 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-------------  156 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc-------------
Confidence             46899999999754322    23446678899999999999888    45565 899999987653             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                         +..+...|+.+|.+.+.+.+.++.+.   +++++++||+.++++.....   ....+.......         ....
T Consensus       157 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~---------~~~~  221 (266)
T 1xq1_A          157 ---SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV---YDDEFKKVVISR---------KPLG  221 (266)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------------
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh---cCHHHHHHHHhc---------CCCC
Confidence               22334679999999999999888764   89999999999999863211   001111111111         1112


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      .+++++|+|++++.++..+.    +..+++.+|..
T Consensus       222 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          222 RFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             --CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence            57899999999999987542    44678887644

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.91  E-value=1.1e-23  Score=171.68  Aligned_cols=212  Identities=17%  Similarity=0.066  Sum_probs=156.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc------------C
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ++|+++||||+|+||+++++.|+++| ++|++++|......+...+.+  ...++.++++|+++...            .
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEG-YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999988875432222222221  12467889999998621            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.               
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  146 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV---------------  146 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC---------------
Confidence            6999999999765332    23446678999999999999988    55566 899999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +..+...|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.....    .......+....++         ..+
T Consensus       147 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~p~---------~r~  212 (246)
T 3osu_A          147 -GNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL----SDELKEQMLTQIPL---------ARF  212 (246)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS----CHHHHHHHHTTCTT---------CSC
T ss_pred             -CCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc----CHHHHHHHHhcCCC---------CCC
Confidence             2234467999999999999988874   479999999999998864322    22333444444332         246


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      .+++|+|+++++++....    +..+++.+|.
T Consensus       213 ~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          213 GQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            788999999999997653    4578888764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.91  E-value=2.7e-23  Score=172.61  Aligned_cols=223  Identities=13%  Similarity=0.062  Sum_probs=152.2

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCcc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~-----------   94 (297)
                      ..++|+++||||+|+||+++++.|+++| ++|++++|+.....+.....+   ....+.++.+|+++..           
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAG-ANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999 999999985432222222221   1347889999999862           


Q ss_pred             -cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       ..++|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.            
T Consensus       101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------  168 (281)
T 3v2h_A          101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV------------  168 (281)
T ss_dssp             HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc------------
Confidence             236999999999765433    23446678899999999999887    44555 899999987652            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHH--HHHcCCC-eEEecCC
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIA--QAIRGEP-LTVQAPG  238 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~  238 (297)
                          +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++.....    ......  ....... ......+
T Consensus       169 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  240 (281)
T 3v2h_A          169 ----ASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ----IPDQARTRGITEEQVINEVMLKG  240 (281)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------------------------------C
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh----cchhhhhcCCCHHHHHHHHHHhc
Confidence                23334679999999999999888763   79999999999998753211    110000  0000000 0111223


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      .....+++++|+|+++++++....    +..+++.+|-
T Consensus       241 ~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          241 QPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             CCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            334568999999999999998654    4477887763

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.91  E-value=1e-22  Score=166.37  Aligned_cols=216  Identities=13%  Similarity=0.041  Sum_probs=148.8

Q ss_pred             cccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCC
Q 022414           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIE   97 (297)
Q Consensus        26 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~   97 (297)
                      +.....+++|+||||+|+||+++++.|+++| ++|++++|+.....+ +...+ ...+.+..+|+++..        ..+
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   84 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHKLG-SKVIISGSNEEKLKS-LGNAL-KDNYTIEVCNLANKEECSNLISKTSN   84 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHH-CSSEEEEECCTTSHHHHHHHHHTCSC
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHH-HHHHh-ccCccEEEcCCCCHHHHHHHHHhcCC
Confidence            3455678999999999999999999999999 999999996432222 11222 246888899998752        236


Q ss_pred             cCEEEEccCCCCCc----ccccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||.....    ...+++...+++|+.++..+++++.    +.+. ++|++||...+.                
T Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------  148 (249)
T 3f9i_A           85 LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA----------------  148 (249)
T ss_dssp             CSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC------------------
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc----------------
Confidence            99999999976532    2346678899999999999988773    3454 899999987652                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.......    .....+....+         ...+.
T Consensus       149 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~---------~~~~~  215 (249)
T 3f9i_A          149 GNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE----KQREAIVQKIP---------LGTYG  215 (249)
T ss_dssp             CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH----HHHHHHHHHCT---------TCSCB
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH----HHHHHHHhcCC---------CCCCc
Confidence            2334467999999999999988876   47999999999998876432211    22222222221         12477


Q ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      +++|+|+++++++....    +..+++.+|..
T Consensus       216 ~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          216 IPEDVAYAVAFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence            89999999999998653    45788877643

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.91  E-value=1.2e-22  Score=162.93  Aligned_cols=192  Identities=17%  Similarity=0.267  Sum_probs=136.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHH-hcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc-----cCCcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL-----LIEVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~-~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~-----~~~~d~vi~~  104 (297)
                      +++|+||||+|+||+++++.|+ +.| ++|++++|+...   .+..+. ...++.++.+|+++..     +.++|+|||+
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g-~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~   80 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTD-MHITLYGRQLKT---RIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVG   80 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCC-CEEEEEESSHHH---HSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEES
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCC-ceEEEEecCccc---cchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEc
Confidence            4569999999999999999999 899 999999996430   122111 2357899999999863     4579999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC-hHHHhHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS-CYDEGKRV  182 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~-~Y~~sK~~  182 (297)
                      +|..               |+. ++++++++++.++ +||++||..+|+...... .+  +   .. .... .|..+|..
T Consensus        81 ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~-~~--~---~~-~~~~~~y~~~K~~  137 (221)
T 3r6d_A           81 AMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVAL-EK--W---TF-DNLPISYVQGERQ  137 (221)
T ss_dssp             CCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHH-HH--H---HH-HTSCHHHHHHHHH
T ss_pred             CCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccc-cc--c---cc-cccccHHHHHHHH
Confidence            9753               333 8899999999998 899999998875321100 00  0   00 0112 69999999


Q ss_pred             HHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc-eeEeeeeHHHHHHHHHHHH--h
Q 022414          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT-QTRSFCYVSDMVDGLIRLM--E  259 (297)
Q Consensus       183 ~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~Dva~~~~~~~--~  259 (297)
                      .|..++    ..+++++++||+.++++....                 .......+. ....+++.+|+|+++++++  .
T Consensus       138 ~e~~~~----~~~i~~~~vrpg~v~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~  196 (221)
T 3r6d_A          138 ARNVLR----ESNLNYTILRLTWLYNDPEXT-----------------DYELIPEGAQFNDAQVSREAVVKAIFDILHAA  196 (221)
T ss_dssp             HHHHHH----HSCSEEEEEEECEEECCTTCC-----------------CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCS
T ss_pred             HHHHHH----hCCCCEEEEechhhcCCCCCc-----------------ceeeccCCccCCCceeeHHHHHHHHHHHHHhc
Confidence            999875    368999999999999873211                 111111111 1124899999999999999  7


Q ss_pred             cCC---CccEEecCC
Q 022414          260 GEN---TGPINIGNP  271 (297)
Q Consensus       260 ~~~---~~~~~i~~~  271 (297)
                      ++.   ++.+.+..+
T Consensus       197 ~~~~~~~~~~~i~~~  211 (221)
T 3r6d_A          197 DETPFHRTSIGVGEP  211 (221)
T ss_dssp             CCGGGTTEEEEEECT
T ss_pred             ChhhhhcceeeecCC
Confidence            765   556777654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.91  E-value=6.5e-23  Score=168.30  Aligned_cols=215  Identities=13%  Similarity=0.053  Sum_probs=149.0

Q ss_pred             ccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc----------
Q 022414           25 FSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL----------   94 (297)
Q Consensus        25 ~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~----------   94 (297)
                      ...+...+|+++||||+|+||+++++.|+++| ++|++++|+.....+.+.    ..++.++.+|+++..          
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHG-HRVIISYRTEHASVTELR----QAGAVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTT-CCEEEEESSCCHHHHHHH----HHTCEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHH----hcCCeEEECCCCCHHHHHHHHHHHH
Confidence            34456678999999999999999999999999 999999997543222222    224788999999862          


Q ss_pred             --cCCcCEEEEccCCCCCcc---cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                        ..++|++||+||......   ..+++...+++|+.++..+++++.+    .+. ++|++||...+.            
T Consensus        95 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------  162 (260)
T 3gem_A           95 TQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK------------  162 (260)
T ss_dssp             HHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT------------
T ss_pred             HhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC------------
Confidence              236999999999765432   2233556889999999999888744    344 899999987652            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                          +......|+.+|.+.+.+.+.++.+.  +++++.++||.+.++....      ...........+         ..
T Consensus       163 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~------~~~~~~~~~~~p---------~~  223 (260)
T 3gem_A          163 ----GSSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD------AAYRANALAKSA---------LG  223 (260)
T ss_dssp             ----CCSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------------CC---------SC
T ss_pred             ----CCCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC------HHHHHHHHhcCC---------CC
Confidence                33345679999999999999988775  4999999999998764211      111111111111         12


Q ss_pred             eeeeHHHHHHHHHHHHhcCC--CccEEecCCCccc
Q 022414          243 SFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFT  275 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s  275 (297)
                      .+..++|+|++++++++...  +..+++.+|..++
T Consensus       224 r~~~~edva~~v~~L~~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          224 IEPGAEVIYQSLRYLLDSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             CCCCTHHHHHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred             CCCCHHHHHHHHHHHhhCCCCCCCEEEECCCcccC
Confidence            35678999999999997554  5578898886654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.90  E-value=9.8e-23  Score=167.79  Aligned_cols=212  Identities=16%  Similarity=0.040  Sum_probs=151.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+ ....+. .++.++++|+++...            .+
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAG-ATVAIADLDVMAAQA-VVAGLE-NGGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHTCT-TCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHHh-cCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 999999986432211 111121 267889999998621            26


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +|++||+||......    ..+++...+++|+.++..+++++.+    .+  .++|++||...+.               
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  151 (263)
T 3ak4_A           87 FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV---------------  151 (263)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS---------------
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc---------------
Confidence            999999999764322    2234667889999999998888754    34  4899999987642               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHH-----------HHHHHHHHcCCCeE
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV-----------SNFIAQAIRGEPLT  233 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~  233 (297)
                       +..+...|+.+|.+.+.+.+.++.+.   ++++++++|+.++++...    ...           ......+....+  
T Consensus       152 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p--  224 (263)
T 3ak4_A          152 -GAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE----REIIWEAELRGMTPEAVRAEYVSLTP--  224 (263)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH----HHHHHHHHHHTSCHHHHHHHHHHTCT--
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh----hhccccccccccCcHHHHHHHHhcCC--
Confidence             22234679999999999999888764   899999999999886421    111           111122222211  


Q ss_pred             EecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       234 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                             ...+++++|+|+++++++..+.    +..+++.+|..
T Consensus       225 -------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          225 -------LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             -------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             -------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence                   1247899999999999997652    44788887744

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.90  E-value=7.5e-23  Score=167.21  Aligned_cols=212  Identities=15%  Similarity=0.079  Sum_probs=150.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc------------CC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      +|+++||||+|+||+++++.|+++| ++|++++|+.....+.......  ..++.++.+|+++...            .+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARG-DRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            5889999999999999999999999 9999999964322221111101  2368889999998621            26


Q ss_pred             cCEEEEccCCCCCcc-------cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-------YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      +|+|||+||......       ..+++...+++|+.++..+++++    ++.+. ++|++||...+.             
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-------------  147 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV-------------  147 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc-------------
Confidence            999999999754322       23446678899999987766665    44566 899999987653             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHH-HHHHHHHHcCCCeEEecCCcee
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV-SNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                         +..+...|+.+|.+.+.+.+.+..+.   +++++++||+.++++....   ... ..+...+....++         
T Consensus       148 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~---------  212 (250)
T 2cfc_A          148 ---AFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW---RLDQPELRDQVLARIPQ---------  212 (250)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH---HHTSHHHHHHHHTTCTT---------
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc---ccCCHHHHHHHHhcCCC---------
Confidence               22334679999999999999988764   8999999999999986321   010 1222333333221         


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      ..+++++|+|++++.++..+.    +..+++.+|.
T Consensus       213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          213 KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence            246799999999999998653    3467777653

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.90  E-value=2.5e-23  Score=171.44  Aligned_cols=218  Identities=16%  Similarity=0.108  Sum_probs=154.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ..++|+++||||+|+||+++++.|+++| ++|++++|......+.+.....  ..++.++++|+++...           
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKG-YSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCC-CEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999 9999998865433333333222  2468899999998621           


Q ss_pred             -CCcCEEEEccCCC--CCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPA--SPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 -~~~d~vi~~a~~~--~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                       .++|++||+||..  ....    ..+++...+++|+.++..+++++    ++.+. ++|++||...++.          
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~----------  152 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA----------  152 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC----------
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc----------
Confidence             2799999999942  2111    23446678899999999999988    56666 8999998754321          


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                          .+..+...|+.+|.+.+.+.+.++.+   .+++++.++||.++++.....    ...........         ..
T Consensus       153 ----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~---------~p  215 (264)
T 3i4f_A          153 ----PGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT----IQEARQLKEHN---------TP  215 (264)
T ss_dssp             ----CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC----HHHHHHC---------------
T ss_pred             ----CCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc----cHHHHHHHhhc---------CC
Confidence                23334568999999999999988876   579999999999998764321    12221111111         11


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      ...+.+++|+|+++++++....    +..+++.+|-..
T Consensus       216 ~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          216 IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             --CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence            2357899999999999998653    457888887554

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.90  E-value=3e-23  Score=170.02  Aligned_cols=219  Identities=16%  Similarity=0.135  Sum_probs=159.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ...++.++++|+++...           
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAG-ASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            44568999999999999999999999999 999999996533222211111 12468899999998631           


Q ss_pred             -CCcCEEEEccCCCCCcc---cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                       .++|++|||||......   ..++++..+++|+.++..+++++.    +.+. ++|++||...+               
T Consensus        87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~---------------  151 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE---------------  151 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT---------------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHc---------------
Confidence             26999999999765432   334566788999999999998873    4455 89999998765               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhH-HHHHHHHHHcCCCeEEecCCceeE
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRV-VSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                       .+......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++...    .. .......+....++         .
T Consensus       152 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~~p~---------~  217 (256)
T 3gaf_A          152 -NTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALA----TVLTPEIERAMLKHTPL---------G  217 (256)
T ss_dssp             -CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH----HHCCHHHHHHHHTTCTT---------S
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhh----hccCHHHHHHHHhcCCC---------C
Confidence             23334577999999999999998876   3799999999999876411    11 12222333333222         2


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccH
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~  276 (297)
                      .+.+++|+|+++++++....    +..+++.+|...++
T Consensus       218 r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          218 RLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred             CCCCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence            47799999999999997543    45788988876654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.90  E-value=9.9e-23  Score=166.89  Aligned_cols=213  Identities=14%  Similarity=0.049  Sum_probs=150.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCce-EEEecccCCccc-----------C
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRF-ELIRHDVTEPLL-----------I   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~-----------~   96 (297)
                      ...+++++||||+|+||+++++.|+++| ++|++++|+.....+... .+. ..+ .++.+|+++...           .
T Consensus         8 ~~~~k~vlITGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (254)
T 2wsb_A            8 RLDGACAAVTGAGSGIGLEICRAFAASG-ARLILIDREAAALDRAAQ-ELG-AAVAARIVADVTDAEAMTAAAAEAEAVA   84 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHH-HHG-GGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-Hhc-ccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence            3567999999999999999999999999 999999996432221111 111 245 788999988621           3


Q ss_pred             CcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||+||.......    .++....+++|+.++..+++++    ++.+. ++|++||...+..              
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--------------  150 (254)
T 2wsb_A           85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIV--------------  150 (254)
T ss_dssp             CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccC--------------
Confidence            68999999997654322    2335667889999977776655    45566 8999999876532              


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHH--HHHHHHHHcCCCeEEecCCceeE
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                      .+..+...|+.+|.+.+.+.+.++.+.   +++++++||+.++++...    ...  +.....+....+.         .
T Consensus       151 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~---------~  217 (254)
T 2wsb_A          151 NRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTL----KMRERPELFETWLDMTPM---------G  217 (254)
T ss_dssp             CSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHH----HHHTCHHHHHHHHHTSTT---------S
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhh----ccccChHHHHHHHhcCCC---------C
Confidence            122334679999999999999888764   899999999999987421    110  1222333332221         2


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      .+++++|+|++++.++..+.    +..+++.+|
T Consensus       218 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          218 RCGEPSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            47899999999999997542    346777765

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.90  E-value=2.9e-23  Score=171.11  Aligned_cols=224  Identities=17%  Similarity=0.096  Sum_probs=156.9

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc----------
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL----------   94 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~----------   94 (297)
                      .+...+|+|+||||+|+||+++++.|+++| ++|++++|+.....+....+..  ..++.++++|+++..          
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAG-ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            344567999999999999999999999999 9999999965433222222211  246889999999862          


Q ss_pred             --cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc----C--CeEEEEecceeecCCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G--ARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                        ..++|++||+||......    ..+++...+++|+.++.++++++.+.    +  .++|++||...+......    .
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----~  163 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----L  163 (265)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----T
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc----c
Confidence              125999999999765332    23445667899999999999887542    3  389999998764321100    0


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                           .+..+...|+.+|.+.+.+++.++.+.   ++++++++|+.++++......    ...........++       
T Consensus       164 -----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~-------  227 (265)
T 1h5q_A          164 -----NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD----KKIRDHQASNIPL-------  227 (265)
T ss_dssp             -----TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC----HHHHHHHHHTCTT-------
T ss_pred             -----cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc----hhHHHHHHhcCcc-------
Confidence                 123345789999999999999888763   799999999999987532211    1222222222211       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                        ..+++++|+|++++.++..+.    +..+++.+|..
T Consensus       228 --~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          228 --NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             --SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             --cCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence              136799999999999997642    45788887643

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.1e-23  Score=174.36  Aligned_cols=243  Identities=15%  Similarity=0.030  Sum_probs=153.1

Q ss_pred             CcccccCCCCCCCCCCCCCCccccccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC
Q 022414            1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH   80 (297)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~   80 (297)
                      |+....+.+...++..+ .+.  .+......+|+++||||+|+||+++++.|+++| ++|++++|+.....+.....  .
T Consensus         1 ~~~~~~~~~~~~~~~~~-g~~--sm~~~~l~gk~vlVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~--~   74 (277)
T 3gvc_A            1 MAHHHHHHMGTLEAQTQ-GPG--SMNHPDLAGKVAIVTGAGAGIGLAVARRLADEG-CHVLCADIDGDAADAAATKI--G   74 (277)
T ss_dssp             -----------------------------CTTCEEEETTTTSTHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHH--C
T ss_pred             CCcccccccCChhhccC-CCC--CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHc--C
Confidence            44444555544443221 122  233345668999999999999999999999999 99999998643322222222  3


Q ss_pred             CceEEEecccCCccc------------CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC
Q 022414           81 PRFELIRHDVTEPLL------------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA  140 (297)
Q Consensus        81 ~~~~~~~~Dl~~~~~------------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~  140 (297)
                      ..+.++++|+++...            .++|++|||||......    ..+++...+++|+.++..+++++.+    .+.
T Consensus        75 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  154 (277)
T 3gvc_A           75 CGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGG  154 (277)
T ss_dssp             SSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            468899999998631            26999999999765432    3345667889999999998888744    444


Q ss_pred             -eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCCh
Q 022414          141 -RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG  216 (297)
Q Consensus       141 -r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~  216 (297)
                       ++|++||...+.                +......|+.+|.+.+.+.+.++.+   .+++++.++||.++++..     
T Consensus       155 g~Iv~isS~~~~~----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~-----  213 (277)
T 3gvc_A          155 GAIVNLSSLAGQV----------------AVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ-----  213 (277)
T ss_dssp             EEEEEECCGGGTS----------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----
T ss_pred             cEEEEEcchhhcc----------------CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH-----
Confidence             899999987642                3344568999999999999988876   579999999999987631     


Q ss_pred             hHHHHHHHHHHcCCCeEEecC---CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          217 RVVSNFIAQAIRGEPLTVQAP---GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                         ...... ..+........   ......+.+++|+|+++++++....    +..+++.+|...
T Consensus       214 ---~~~~~~-~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          214 ---QTAMAM-FDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             ---HHHHTC-C------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ---HHhhhc-chhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchh
Confidence               010000 00000000000   0011246789999999999997643    447888877544

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.90  E-value=1.1e-22  Score=168.09  Aligned_cols=218  Identities=13%  Similarity=0.022  Sum_probs=156.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~-----------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|... ..+....+.. ...+.++.+|+++...           
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAG-AHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT  104 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSTH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEcCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence            44568999999999999999999999999 99999987421 1111112211 2468889999998631           


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.              
T Consensus       105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~--------------  170 (273)
T 3uf0_A          105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ--------------  170 (273)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC--------------
Confidence            26999999999765433    23446678899999999999877    44555 899999987652              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.....  .........+....++         ..
T Consensus       171 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~p~---------~r  237 (273)
T 3uf0_A          171 --GGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL--RADDERAAEITARIPA---------GR  237 (273)
T ss_dssp             --CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--HTSHHHHHHHHHHSTT---------SS
T ss_pred             --CCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc--ccCHHHHHHHHhcCCC---------CC
Confidence              3334567999999999999998877   579999999999998752110  0011222222222221         24


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      +..++|+|+++++++....    +..+++.+|..+
T Consensus       238 ~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          238 WATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence            6789999999999998643    447888877543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.90  E-value=4e-22  Score=162.87  Aligned_cols=215  Identities=16%  Similarity=0.072  Sum_probs=142.7

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+...     .    ..++..+.+|+++..            ..
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~-----~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   73 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAG-AKVTGFDQAFTQ-----E----QYPFATEVMDVADAAQVAQVCQRLLAETE   73 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCCCS-----S----CCSSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCchhh-----h----cCCceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999 999999996431     1    113778889998862            12


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.               
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------  138 (250)
T 2fwm_X           74 RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT---------------  138 (250)
T ss_dssp             CCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS---------------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC---------------
Confidence            6999999999754322    23456778899999999999888    44555 999999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHH-HHHcCCCeEEecCCceeEe
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIA-QAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  243 (297)
                       +..+...|+.+|.+.+.+.+.++.+   .++++++++|+.++++.......  ...... .+....  ..+........
T Consensus       139 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~p~~~  213 (250)
T 2fwm_X          139 -PRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV--SDDAEEQRIRGFG--EQFKLGIPLGK  213 (250)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc--ChhHHHHHHhhhh--hcccccCCCCC
Confidence             2334467999999999999988876   38999999999999875321000  000000 000000  00000111234


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      +.+++|+|+++++++..+.    +..+.+.+|..
T Consensus       214 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          214 IARPQEIANTILFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             --CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            7899999999999997643    44677777643

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.90  E-value=1.3e-22  Score=167.24  Aligned_cols=216  Identities=15%  Similarity=0.121  Sum_probs=153.7

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------   95 (297)
                      +...+|+|+||||+|+||+++++.|+++| ++|++++|+.....+.... + ..++.++++|+++...            
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQG-ASAVLLDLPNSGGEAQAKK-L-GNNCVFAPADVTSEKDVQTALALAKGKF   84 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECTTSSHHHHHHH-H-CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCcHhHHHHHHH-h-CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            34567999999999999999999999999 9999999975433322222 2 2468899999998621            


Q ss_pred             CCcCEEEEccCCCCCcc----------cccChhhhHHHhHHHHHHHHHHHHHc----------CC-eEEEEecceeecCC
Q 022414           96 IEVDQIYHLACPASPIF----------YKYNPVKTIKTNVIGTLNMLGLAKRV----------GA-RILLTSTSEVYGDP  154 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~-r~v~~Ss~~~~~~~  154 (297)
                      .++|+|||+||......          ..+++...+++|+.++..+++++.+.          +. ++|++||...+.  
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--  162 (265)
T 2o23_A           85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE--  162 (265)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH--
T ss_pred             CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC--
Confidence            26999999999764321          23346678899999999999988764          55 899999988753  


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCC
Q 022414          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP  231 (297)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  231 (297)
                                    +..+...|+.+|.+.+.+.+.++.+   .++++++++|+.+.++....    .............+
T Consensus       163 --------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~  224 (265)
T 2o23_A          163 --------------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS----LPEKVCNFLASQVP  224 (265)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCS
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc----cCHHHHHHHHHcCC
Confidence                          2233467999999999999888766   47999999999998875321    10111111111111


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC--CccEEecCCCcc
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEF  274 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~  274 (297)
                      .        ...+++++|+|++++++++.+.  +..+++.+|..+
T Consensus       225 ~--------~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          225 F--------PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             S--------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             C--------cCCCCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            1        0246799999999999998655  447788776543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.90  E-value=4.1e-23  Score=169.79  Aligned_cols=221  Identities=13%  Similarity=0.023  Sum_probs=156.7

Q ss_pred             cccCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc---------
Q 022414           28 FFQSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL---------   95 (297)
Q Consensus        28 ~~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~---------   95 (297)
                      +...+|+++||||+  |+||+++++.|+++| ++|++++|+.. ..+....+.. ...+.++.+|+++...         
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G-~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAG-AEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHT-CEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCC-CEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            34567999999999  999999999999999 99999999653 1112222211 1247889999998621         


Q ss_pred             ---CCcCEEEEccCCCCC--------cccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCC
Q 022414           96 ---IEVDQIYHLACPASP--------IFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        96 ---~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                         .++|++||+||....        ....+++...+++|+.++..+++++.+.   +.++|++||...+.         
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~---------  152 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK---------  152 (261)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS---------
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC---------
Confidence               268999999997542        1133456678999999999999999765   33899999976642         


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                             +..+...|+.+|.+.+.+.+.++.+.   +++++.++|+.++++......  ........+....++      
T Consensus       153 -------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~p~------  217 (261)
T 2wyu_A          153 -------VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP--GFTKMYDRVAQTAPL------  217 (261)
T ss_dssp             -------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT--THHHHHHHHHHHSTT------
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc--ccHHHHHHHHhcCCC------
Confidence                   22234579999999999999888764   899999999999987532111  112222222222221      


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccHH
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTML  277 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~  277 (297)
                         ..+.+++|+|+++++++....    +..+++.+|..++..
T Consensus       218 ---~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~  257 (261)
T 2wyu_A          218 ---RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGM  257 (261)
T ss_dssp             ---SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC-
T ss_pred             ---CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCC
Confidence               135689999999999997533    447888887665433

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.90  E-value=2.9e-22  Score=162.29  Aligned_cols=195  Identities=13%  Similarity=0.125  Sum_probs=131.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~~a  105 (297)
                      ++|+|+||||+|+||+++++.|+++|.++|++++|+.....+     +...++.++++|+++..     +.++|+|||++
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a   96 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-----PYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL   96 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-----SCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-----cccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence            468899999999999999999999985699999996543222     12347899999999863     45799999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      +....              ...+.++++++++.++ +||++||..+|+..........   .....    .+...+..+|
T Consensus        97 ~~~~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~  155 (236)
T 3qvo_A           97 TGEDL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWN---NAVIG----EPLKPFRRAA  155 (236)
T ss_dssp             CSTTH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC-------------------C----GGGHHHHHHH
T ss_pred             CCCch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccch---hhccc----chHHHHHHHH
Confidence            75321              1246689999999998 8999999999875432211111   00111    2233344445


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce-eEeeeeHHHHHHHHHHHHhcCC-
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ-TRSFCYVSDMVDGLIRLMEGEN-  262 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~~~~~~~~~~~-  262 (297)
                      ..+    ...+++++++||+.++++....                  ......+.. ...+++++|+|++++.+++++. 
T Consensus       156 ~~l----~~~gi~~~~vrPg~i~~~~~~~------------------~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~  213 (236)
T 3qvo_A          156 DAI----EASGLEYTILRPAWLTDEDIID------------------YELTSRNEPFKGTIVSRKSVAALITDIIDKPEK  213 (236)
T ss_dssp             HHH----HTSCSEEEEEEECEEECCSCCC------------------CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTT
T ss_pred             HHH----HHCCCCEEEEeCCcccCCCCcc------------------eEEeccCCCCCCcEECHHHHHHHHHHHHcCccc
Confidence            444    3468999999999999875211                  111111111 1358999999999999999876 


Q ss_pred             --CccEEecCCCc
Q 022414          263 --TGPINIGNPGE  273 (297)
Q Consensus       263 --~~~~~i~~~~~  273 (297)
                        ++.|++++++.
T Consensus       214 ~~g~~~~i~~~~~  226 (236)
T 3qvo_A          214 HIGENIGINQPGT  226 (236)
T ss_dssp             TTTEEEEEECSSC
T ss_pred             ccCeeEEecCCCC
Confidence              66899988754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.90  E-value=6.2e-23  Score=169.32  Aligned_cols=220  Identities=15%  Similarity=0.058  Sum_probs=156.5

Q ss_pred             cccccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc----
Q 022414           22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL----   95 (297)
Q Consensus        22 ~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~----   95 (297)
                      +.+|..+...+|+++||||+|+||+++++.|+++| ++|++++|......+.+...+  ....+.++++|+++...    
T Consensus        18 ~~~m~~~~l~~k~vlVTGas~gIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~   96 (269)
T 4dmm_A           18 GSHMTALPLTDRIALVTGASRGIGRAIALELAAAG-AKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEAL   96 (269)
T ss_dssp             ------CTTTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             cccccccCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            33455666788999999999999999999999999 999998885433222222221  12468889999998631    


Q ss_pred             --------CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCC
Q 022414           96 --------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        96 --------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~  158 (297)
                              .++|++||+||......    ..++++..+++|+.++..+++++    ++.+. ++|++||...+.      
T Consensus        97 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------  170 (269)
T 4dmm_A           97 FAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM------  170 (269)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC------
Confidence                    26999999999765432    23456678899999999998887    33444 899999987652      


Q ss_pred             CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEe
Q 022414          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (297)
                                +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++...    ....   .......++   
T Consensus       171 ----------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~---~~~~~~~p~---  230 (269)
T 4dmm_A          171 ----------GNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS----ELAA---EKLLEVIPL---  230 (269)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC----HHHH---HHHGGGCTT---
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc----cccH---HHHHhcCCC---
Confidence                      2233467999999999999988876   4799999999999987631    1111   222222221   


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC-----CccEEecCCCcc
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN-----TGPINIGNPGEF  274 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~-----~~~~~i~~~~~~  274 (297)
                            ..+.+++|+|+++++++..+.     +..+++.+|..+
T Consensus       231 ------~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          231 ------GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             ------SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             ------CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence                  246789999999999998742     447888887554

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.90  E-value=2.6e-24  Score=170.92  Aligned_cols=185  Identities=14%  Similarity=0.175  Sum_probs=139.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-----C---CcCEEEEc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----I---EVDQIYHL  104 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-----~---~~d~vi~~  104 (297)
                      |+++||||+|+||+++++.|+++   +|++++|+..... .+...+.  . .++.+|+++...     .   ++|+|||+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~-~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALA-ELAREVG--A-RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHH-HHHHHHT--C-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHH-HHHHhcc--C-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            68999999999999999999987   8999998642221 1111121  2 788899988631     2   79999999


Q ss_pred             cCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHh
Q 022414          105 ACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       105 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      ||......    ..+++...+++|+.++.++++++++.+. ++|++||...+.                +..+...|+.+
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~----------------~~~~~~~Y~~s  137 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV----------------QVPGFAAYAAA  137 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH----------------SSTTBHHHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc----------------CCCCcchHHHH
Confidence            99764322    3445677899999999999999976666 899999988763                23345679999


Q ss_pred             HHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHH
Q 022414          180 KRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       180 K~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      |.+.|.+++.++.+   .+++++++||+.++++...                       +.+....++++++|+|++++.
T Consensus       138 K~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-----------------------~~~~~~~~~~~~~dva~~~~~  194 (207)
T 2yut_A          138 KGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA-----------------------PLGGPPKGALSPEEAARKVLE  194 (207)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG-----------------------GGTSCCTTCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc-----------------------ccCCCCCCCCCHHHHHHHHHH
Confidence            99999999988876   5899999999999986410                       011222468999999999999


Q ss_pred             HHhcCCC
Q 022414          257 LMEGENT  263 (297)
Q Consensus       257 ~~~~~~~  263 (297)
                      +++++..
T Consensus       195 ~~~~~~~  201 (207)
T 2yut_A          195 GLFREPV  201 (207)
T ss_dssp             HHC--CC
T ss_pred             HHhCCCC
Confidence            9998763

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.90  E-value=7.9e-23  Score=168.04  Aligned_cols=220  Identities=13%  Similarity=0.027  Sum_probs=153.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..++.++.+|+++..            .
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLG-ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3567999999999999999999999999 9999999964322221111111 236788999999862            1


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       .++|++||+||......    ..+++...+++|+.++.++++++    ++.+. ++|++||...+.             
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  151 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL-------------  151 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-------------
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-------------
Confidence             46999999999764322    23446678899999999999888    34565 899999987642             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCC-ChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                         +......|+.+|.+.+.+.+.++.+.   +++++.++|+.+.++..... ........+..+....+         .
T Consensus       152 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~  219 (260)
T 2ae2_A          152 ---AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA---------L  219 (260)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST---------T
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC---------C
Confidence               22334679999999999999988764   79999999999987531100 00000111112222221         1


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      ..+++++|+|+++++++....    +..+++.+|..+
T Consensus       220 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          220 RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            247899999999999987542    446788777544

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.90  E-value=7.2e-23  Score=167.01  Aligned_cols=212  Identities=13%  Similarity=0.053  Sum_probs=140.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCCCccchhhhc--CCCceEEEecccCCccc-----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ..+|+|+||||+|+||+++++.|+++| ++|+++ .|+.. ..+.....+  ...++.++.+|+++...           
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G-~~V~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMG-ANIVLNGSPAST-SLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEECTTCS-HHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCcCHH-HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            457999999999999999999999999 999998 44332 212221111  12468899999998631           


Q ss_pred             -CCcCEEEEccCCCCCc----ccccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       .++|+|||+||.....    ...+++...+++|+.++.++++++.+    .+. ++|++||...+.             
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------------  147 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII-------------  147 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc-------------
Confidence             2699999999975432    13455778899999998888877753    565 899999975421             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                         +..+...|+.+|.+.+.+.+.++.+.   ++++++++|+.+.++....    +.......+..+.+.         .
T Consensus       148 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~---------~  211 (247)
T 2hq1_A          148 ---GNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV----LPDKVKEMYLNNIPL---------K  211 (247)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT----SCHHHHHHHHTTSTT---------S
T ss_pred             ---CCCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh----cchHHHHHHHhhCCC---------C
Confidence               11233679999999999999887764   7999999999987653211    111122222222211         2


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      .+++++|+|++++.++..+.    +..|++.+|.
T Consensus       212 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          212 RFGTPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence            47899999999999987642    4478888764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.90  E-value=1.1e-22  Score=169.18  Aligned_cols=228  Identities=17%  Similarity=0.095  Sum_probs=157.2

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC--------ccchhh---hc--CCCceEEEecccCCccc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--------KDNLRK---WI--GHPRFELIRHDVTEPLL   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--------~~~~~~---~~--~~~~~~~~~~Dl~~~~~   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+....        .+.+.+   .+  ...++.++++|+++...
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   85 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAG-ADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA   85 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            3467999999999999999999999999 9999999964321        111111   11  12468899999998621


Q ss_pred             ------------CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCC
Q 022414           96 ------------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDP  154 (297)
Q Consensus        96 ------------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~  154 (297)
                                  .++|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.  
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--  163 (281)
T 3s55_A           86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS--  163 (281)
T ss_dssp             HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS--
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC--
Confidence                        26999999999765332    33446678899999999999886    34455 899999987652  


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCC
Q 022414          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP  231 (297)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  231 (297)
                                    +..+...|+.+|.+.+.+.+.++.+   .+++++.++||.++++.....  .....+.........
T Consensus       164 --------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~  227 (281)
T 3s55_A          164 --------------ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHND--FVFGTMRPDLEKPTL  227 (281)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSH--HHHHC-------CCH
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccch--hhhccccccccccch
Confidence                          3334567999999999999999876   479999999999999874321  000000000000000


Q ss_pred             ----eEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          232 ----LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       232 ----~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                          ..+........++++++|+|+++++++....    +..+++.+|...+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          228 KDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence                0000001112468899999999999998654    4578888876544

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.90  E-value=4.4e-23  Score=168.40  Aligned_cols=213  Identities=13%  Similarity=0.025  Sum_probs=149.8

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.  ....+.++.+|+++...           
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAG-STVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3567999999999999999999999999 999999996432221111110  12468889999988621           


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       .++|+|||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+..            
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------  150 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG------------  150 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHC------------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCC------------
Confidence             27999999999765322    23446678899999997666554    45666 8999999765421            


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                          ..+...|+.+|.+.+.+.+.++.+   .++++++++|+.++++.....    ............+.         .
T Consensus       151 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~~---------~  213 (248)
T 2pnf_A          151 ----NVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL----SEEIKQKYKEQIPL---------G  213 (248)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS----CHHHHHHHHHTCTT---------S
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc----cHHHHHHHHhcCCC---------C
Confidence                122357999999999999888765   379999999999998763211    11122222222211         2


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      .+++++|+|++++.++....    +..|++.+|
T Consensus       214 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          214 RFGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            47899999999999997642    447888775

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.90  E-value=2e-22  Score=164.42  Aligned_cols=216  Identities=11%  Similarity=-0.008  Sum_probs=156.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+...... ...++.++.+|+++..            .
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKG-ATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3457999999999999999999999999 999999996533222211111 1246889999999862            2


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||......    ..+++...+++|+.++.++++++.+    .+. ++|++||...+.              
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------  146 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA--------------  146 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--------------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc--------------
Confidence            25899999999765432    3345667889999999999888743    444 899999987653              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++......    ...........+         ...
T Consensus       147 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~---------~~~  211 (247)
T 3lyl_A          147 --GNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT----DEQKSFIATKIP---------SGQ  211 (247)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC----HHHHHHHHTTST---------TCC
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc----HHHHHHHhhcCC---------CCC
Confidence              2233467999999999999988876   4799999999999887643221    122222222221         135


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      +.+++|+|+++++++....    +..+++.+|..+
T Consensus       212 ~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          212 IGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence            7899999999999997643    457888877544

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.90  E-value=7.9e-23  Score=167.62  Aligned_cols=217  Identities=17%  Similarity=0.125  Sum_probs=151.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+...  +.....+.  . .++++|+++..            ..+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~--~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREG-ALVALCDLRPEG--KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGR   77 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSTTH--HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChhH--HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999 999999997544  22222222  3 78899999862            126


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++|||||......    ..+++...+++|+.++..+++++.+    .+. ++|++||...+.                
T Consensus        78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------  141 (256)
T 2d1y_A           78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----------------  141 (256)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC----------------
Confidence            899999999765432    2234567889999999999888744    455 899999987642                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHH-cCCCeEEecCCceeEee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAI-RGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  244 (297)
                      +..+...|+.+|.+.+.+.+.++.+.   +++++.++|+.+.++.        ....+.... ................+
T Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (256)
T 2d1y_A          142 AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA--------VLEAIALSPDPERTRRDWEDLHALRRL  213 (256)
T ss_dssp             BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH--------HHHHHC--------CHHHHTTSTTSSC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch--------hhhccccccCCHHHHHHHHhcCCCCCC
Confidence            22334679999999999999888763   7999999999887642        111100000 00000000111112357


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCcccH
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~  276 (297)
                      ++++|+|+++++++..+.    +..+++.+|..+++
T Consensus       214 ~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          214 GKPEEVAEAVLFLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             cCHHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence            899999999999998652    44788888766544

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.90  E-value=2.7e-22  Score=165.01  Aligned_cols=214  Identities=14%  Similarity=0.031  Sum_probs=151.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~------------   95 (297)
                      ..+|+|+||||+|+||+++++.|+++| ++|++++|+.....+.+...+  ...++.++.+|+++...            
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEK-AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 999999983221111111111  12467889999998621            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC-C-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-A-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      .++|+|||+||......    ..+++...+++|+.++..+++++.+    .+ . ++|++||...+              
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~--------------  149 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK--------------  149 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT--------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc--------------
Confidence            26999999999765322    2344667889999999888877644    34 3 89999997654              


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHH--HHHHHHHHcCCCeEEecCCce
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  240 (297)
                        .+..+...|+.+|.+.+.+.+.++.+.   +++++++||+.++++..    ....  ......+....++        
T Consensus       150 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~----~~~~~~~~~~~~~~~~~~~--------  215 (261)
T 1gee_A          150 --IPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN----AEKFADPEQRADVESMIPM--------  215 (261)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG----HHHHHSHHHHHHHHTTCTT--------
T ss_pred             --CCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchh----hhcccChhHHHHHHhcCCC--------
Confidence              233445789999999999998887664   89999999999998752    1111  1222222222111        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                       ..+++++|+|++++.++....    +..+++.+|..
T Consensus       216 -~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          216 -GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -CCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence             247899999999999987532    44678877654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.90  E-value=6.8e-23  Score=169.74  Aligned_cols=217  Identities=15%  Similarity=0.086  Sum_probs=152.4

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ...+|+|+||||+|+||+++++.|+++| ++|++++|......+.+...+.  ..++.++.+|+++...           
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRG-ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 9999999832221111111111  2468889999998631           


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceee-cCCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVY-GDPLVHPQDESYWGN  166 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~-~~~~~~~~~e~~~~~  166 (297)
                       .++|++||+||......    ..+++...+++|+.++.++++++.+.   +.++|++||...+ ..             
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-------------  163 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG-------------  163 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS-------------
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCC-------------
Confidence             26999999999764322    23345678899999999999998765   4589999998775 21             


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCCh--------hHH-HHHHHHHHcCCCeEE
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG--------RVV-SNFIAQAIRGEPLTV  234 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~--------~~~-~~~~~~~~~~~~~~~  234 (297)
                         ......|+.+|.+.|.+++.++.+.   ++++++++|+.++++.......        ... .........+.+   
T Consensus       164 ---~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  237 (274)
T 1ja9_A          164 ---IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNP---  237 (274)
T ss_dssp             ---CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTST---
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCC---
Confidence               1233579999999999999888764   8999999999998764210000        000 112222222221   


Q ss_pred             ecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       235 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                            ..++++++|+|++++.++..+.    +..|++++|
T Consensus       238 ------~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          238 ------LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             ------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence                  1357899999999999997642    447888775

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.90  E-value=9.9e-23  Score=166.83  Aligned_cols=221  Identities=14%  Similarity=0.098  Sum_probs=160.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+.. +.+ ..++.++++|+++...            .+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGG-AEVLLTGRNESNIARIR-EEF-GPRVHALRSDIADLNEIAVLGAAAGQTLGA   82 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHH-HHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHH-HHh-CCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999 99999999643222211 112 2468899999998631            26


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      +|++|||||......    ..+++...+++|+.++..+++++.+.   +-++|++||...+.                +.
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~  146 (255)
T 4eso_A           83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG----------------GH  146 (255)
T ss_dssp             EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS----------------BC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC----------------CC
Confidence            999999999765433    33456678999999999999999764   23799999987652                23


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCC--ChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      .....|+.+|.+.+.+.+.++.+.   +++++.++||.+.++.....  .......+........++         ..+.
T Consensus       147 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~  217 (255)
T 4eso_A          147 PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM---------KRNG  217 (255)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT---------SSCB
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC---------CCCc
Confidence            345679999999999999988763   79999999999998864321  111222222222222221         2367


Q ss_pred             eHHHHHHHHHHHHhcCC---CccEEecCCCcccHHH
Q 022414          246 YVSDMVDGLIRLMEGEN---TGPINIGNPGEFTMLE  278 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s~~e  278 (297)
                      +++|+|+++++++....   +..+++.+|...++.+
T Consensus       218 ~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          218 TADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             CHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             CHHHHHHHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence            89999999999987632   4478888887665443

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.90  E-value=1.6e-22  Score=166.25  Aligned_cols=216  Identities=14%  Similarity=0.015  Sum_probs=153.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ....+..+.+|+++...            .
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDG-AHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 999999996432222111111 12367888999987621            2


Q ss_pred             CcCEEEEccCCCCC-c----ccccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||+||.... .    ...+++...+++|+.++..+++++.    +.+. ++|++||...+.              
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  156 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH--------------  156 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--------------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC--------------
Confidence            69999999996531 1    1233456788999999988888874    4566 899999988763              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHH--HHHHHHHHcCCCeEEecCCcee
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                        +..+...|+.+|.+.+.+.+.++.+.   +++++.++|+.+.++...    ...  ...........+         .
T Consensus       157 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~---------~  221 (260)
T 2zat_A          157 --PFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ----VLWMDKARKEYMKESLR---------I  221 (260)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH----HHHSSHHHHHHHHHHHT---------C
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch----hcccChHHHHHHHhcCC---------C
Confidence              23344679999999999999888764   799999999999887521    110  011111111111         1


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      ..+++++|+|+++++++..+.    +..+++.+|..++
T Consensus       222 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          222 RRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             SSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            247899999999999997653    4478999887665

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.90  E-value=4.1e-22  Score=165.51  Aligned_cols=218  Identities=14%  Similarity=0.087  Sum_probs=152.2

Q ss_pred             cccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc--------
Q 022414           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL--------   95 (297)
Q Consensus        26 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~--------   95 (297)
                      ..+...+|+|+||||+|+||+++++.|+++| ++|++++|+..... .....+.  ..++.++.+|+++...        
T Consensus        28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~  105 (279)
T 3ctm_A           28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAG-ADVAIWYNSHPADE-KAEHLQKTYGVHSKAYKCNISDPKSVEETISQQ  105 (279)
T ss_dssp             GGGCCTTCEEEETTTTSSHHHHHHHHHHHHT-CEEEEEESSSCCHH-HHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHHhcCCcceEEEeecCCHHHHHHHHHHH
Confidence            3344678999999999999999999999999 99999999754322 1211111  2468889999998621        


Q ss_pred             ----CCcCEEEEccCCCCC------cccccChhhhHHHhHHH----HHHHHHHHHHcCC-eEEEEecceeecCCCCCCCC
Q 022414           96 ----IEVDQIYHLACPASP------IFYKYNPVKTIKTNVIG----TLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        96 ----~~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~  160 (297)
                          .++|+|||+||....      ....+++...+++|+.+    ++.+++.+++.+. ++|++||...+..       
T Consensus       106 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------  178 (279)
T 3ctm_A          106 EKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV-------  178 (279)
T ss_dssp             HHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-------
T ss_pred             HHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC-------
Confidence                259999999997644      12233456688899999    5566777777776 9999999875421       


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                             .+..+...|+.+|.+.|.+++.++.+.   + +++.++|+.+.++.........    ...+....+.     
T Consensus       179 -------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~p~-----  241 (279)
T 3ctm_A          179 -------NIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDM----KAKWWQLTPL-----  241 (279)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHH----HHHHHHHSTT-----
T ss_pred             -------CCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHH----HHHHHHhCCc-----
Confidence                   113345679999999999999988763   5 8999999999887642211111    1111111111     


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                          ..+++++|+|+++++++..+.    +..+++.+|..
T Consensus       242 ----~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          242 ----GREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             ----CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             ----cCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence                137899999999999998642    44778877643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.90  E-value=5.2e-23  Score=171.74  Aligned_cols=215  Identities=12%  Similarity=0.103  Sum_probs=155.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~------------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+.......  ..++.++++|+++...            
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEG-ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999 9999999975432222222221  2468899999998621            


Q ss_pred             CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      .++|++|||||......     ..+++...+++|+.++..+++++.+.   +-++|++||...+.               
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~---------------  188 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE---------------  188 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH---------------
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC---------------
Confidence            26999999999754322     33456778999999999999999774   23899999988763               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|+.+|.+.+.+.+.++.+.   +++++.++||.++++....   .+-......+....         ....+
T Consensus       189 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~---------p~~r~  255 (291)
T 3ijr_A          189 -GNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS---SFDEKKVSQFGSNV---------PMQRP  255 (291)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH---HSCHHHHHHTTTTS---------TTSSC
T ss_pred             -CCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc---cCCHHHHHHHHccC---------CCCCC
Confidence             22334679999999999999988764   8999999999998874210   00011111111111         12347


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      .+++|+|+++++++....    +..+++.+|-.
T Consensus       256 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  288 (291)
T 3ijr_A          256 GQPYELAPAYVYLASSDSSYVTGQMIHVNGGVI  288 (291)
T ss_dssp             BCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCC
T ss_pred             cCHHHHHHHHHHHhCCccCCCcCCEEEECCCcc
Confidence            789999999999997643    44678877644

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.90  E-value=1.7e-22  Score=167.26  Aligned_cols=216  Identities=19%  Similarity=0.050  Sum_probs=154.4

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ...++.++++|+++...           
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAG-AQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999 999999996543332222221 12468889999998631           


Q ss_pred             -CCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       .++|++|||||.......    .++++..+++|+.++..+++++.+    .+  .++|++||...+..           
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~-----------  175 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII-----------  175 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc-----------
Confidence             269999999997654332    344566778999999999888744    33  37999999875421           


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                         ....+...|+.+|.+.+.+.+.++.+   .+++++.++||.+..+.....     ...........++         
T Consensus       176 ---~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-----~~~~~~~~~~~p~---------  238 (276)
T 3r1i_A          176 ---NIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL-----ADYHALWEPKIPL---------  238 (276)
T ss_dssp             ---CCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG-----GGGHHHHGGGSTT---------
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc-----hHHHHHHHhcCCC---------
Confidence               11223467999999999999998877   579999999999998764221     1122222222221         


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      ..+..++|+|+++++++....    +..+++.+|.
T Consensus       239 ~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          239 GRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCcEEEECcCc
Confidence            236789999999999998643    4467777764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.90  E-value=1.7e-23  Score=165.53  Aligned_cols=181  Identities=18%  Similarity=0.121  Sum_probs=137.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc--------CCcCEEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIYH  103 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~--------~~~d~vi~  103 (297)
                      .|+|+||||+|+||+++++.|+ +| ++|++++|+..                .+.+|+++...        .++|+|||
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g-~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~~d~vi~   64 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KK-AEVITAGRHSG----------------DVTVDITNIDSIKKMYEQVGKVDAIVS   64 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TT-SEEEEEESSSS----------------SEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CC-CeEEEEecCcc----------------ceeeecCCHHHHHHHHHHhCCCCEEEE
Confidence            3689999999999999999999 99 99999998542                35678877521        24899999


Q ss_pred             ccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChH
Q 022414          104 LACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (297)
Q Consensus       104 ~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (297)
                      +||.......    .+++...+++|+.++.++++++.+.   +.++|++||...+.                +..+...|
T Consensus        65 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~~~~~Y  128 (202)
T 3d7l_A           65 ATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED----------------PIVQGASA  128 (202)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS----------------CCTTCHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC----------------CCCccHHH
Confidence            9996543222    2334567789999999999999876   45899999986542                23344679


Q ss_pred             HHhHHHHHHHHHHHHHH--hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHH
Q 022414          177 DEGKRVAETLMFDYHRQ--HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~--~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      +.+|.+.|.+++.+..+  .+++++++||+.++++..         .    ...         .....++++++|+|+++
T Consensus       129 ~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~---------~----~~~---------~~~~~~~~~~~dva~~~  186 (202)
T 3d7l_A          129 AMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD---------K----LEP---------FFEGFLPVPAAKVARAF  186 (202)
T ss_dssp             HHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH---------H----HGG---------GSTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh---------h----hhh---------hccccCCCCHHHHHHHH
Confidence            99999999999988765  389999999999998641         0    001         11224689999999999


Q ss_pred             HHHHhcCCCc-cEEe
Q 022414          255 IRLMEGENTG-PINI  268 (297)
Q Consensus       255 ~~~~~~~~~~-~~~i  268 (297)
                      +.++.....| .|++
T Consensus       187 ~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          187 EKSVFGAQTGESYQV  201 (202)
T ss_dssp             HHHHHSCCCSCEEEE
T ss_pred             HHhhhccccCceEec
Confidence            9988655544 6765

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.90  E-value=1.2e-22  Score=168.47  Aligned_cols=222  Identities=13%  Similarity=0.046  Sum_probs=157.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ...+.++.+|+++...            .
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREG-AKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 9999999865332222222211 2468889999998621            2


Q ss_pred             CcCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++|||||.....     ...+++...+++|+.++..+++++.+    .+. ++|++||...+.              
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------  150 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT--------------  150 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT--------------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc--------------
Confidence            699999999965321     13345677899999999999888743    444 899999987652              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                       .+......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++................+....++         ..
T Consensus       151 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r  220 (280)
T 3tox_A          151 -AGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL---------KR  220 (280)
T ss_dssp             -BCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT---------SS
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc---------CC
Confidence             122334679999999999999988764   79999999999998864220000011222222222221         24


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCcccH
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~  276 (297)
                      +..++|+|+++++++....    +..+++.+|..++.
T Consensus       221 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          221 IARPEEIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            6789999999999998653    45788888866543

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.89  E-value=1.6e-22  Score=165.93  Aligned_cols=219  Identities=9%  Similarity=-0.004  Sum_probs=154.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..++.++++|+++...            .
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEG-ARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 9999999965432222222211 2368899999998621            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH-----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA-----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~-----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++|||||......    ..+++...+++|+.++..+++++     ++.+. ++|++||...+.              
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  148 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD--------------  148 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS--------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc--------------
Confidence            6999999999654322    23446678899999999999888     33333 899999987652              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        +......|+.+|.+.+.+.+.++.+    .+++++.++||.+.++...... .....+........+         ..
T Consensus       149 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~p---------~~  216 (257)
T 3imf_A          149 --AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKL-WISEEMAKRTIQSVP---------LG  216 (257)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHHTTST---------TC
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhc-ccCHHHHHHHHhcCC---------CC
Confidence              2334467999999999998887753    4899999999999987532110 001111122222221         12


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      .+..++|+|+++++++....    +..+++.+|..++
T Consensus       217 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          217 RLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            47899999999999998653    4478888876654

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.89  E-value=2.1e-22  Score=163.77  Aligned_cols=204  Identities=17%  Similarity=0.112  Sum_probs=151.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-----------CCcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----------IEVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-----------~~~d~  100 (297)
                      +|+|+||||+|+||+++++.|+++| ++|++++|+.. .          ..+.++++|+++...           .++|+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G-~~V~~~~r~~~-~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~   69 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARG-YRVVVLDLRRE-G----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFA   69 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEESSCC-S----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEccCcc-c----------cceEEEeCCCCCHHHHHHHHHHHHhhCCceE
Confidence            5899999999999999999999999 99999998643 1          245788999988621           16899


Q ss_pred             EEEccCCCCCcccc----c----ChhhhHHHhHHHHHHHHHHHHHc----C------C-eEEEEecceeecCCCCCCCCC
Q 022414          101 IYHLACPASPIFYK----Y----NPVKTIKTNVIGTLNMLGLAKRV----G------A-RILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus       101 vi~~a~~~~~~~~~----~----~~~~~~~~n~~~~~~l~~~~~~~----~------~-r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                      +||+||........    +    ++...+++|+.++.++++++.+.    +      . ++|++||...+..        
T Consensus        70 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------  141 (242)
T 1uay_A           70 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG--------  141 (242)
T ss_dssp             EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC--------
T ss_pred             EEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC--------
Confidence            99999976543221    1    56678899999999999988653    1      1 8999999887642        


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                              ..+...|+.+|.+.+.+.+.++.+.   +++++++||+.++++.....    ...+...+....++      
T Consensus       142 --------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~~------  203 (242)
T 1uay_A          142 --------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL----PEKAKASLAAQVPF------  203 (242)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS----CHHHHHHHHTTCCS------
T ss_pred             --------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc----chhHHHHHHhhCCC------
Confidence                    2234679999999999998887663   89999999999998753211    11222233332221      


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC--CccEEecCCCccc
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFT  275 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s  275 (297)
                        ...+++++|+|++++.++....  +..+++.+|..++
T Consensus       204 --~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          204 --PPRLGRPEEYAALVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             --SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             --cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence              0237899999999999998743  4578888876553

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.89  E-value=1.8e-22  Score=166.08  Aligned_cols=221  Identities=12%  Similarity=0.047  Sum_probs=147.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+... .+ ...+.++.+|+++...            
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGG-AKVVIVDRDKAGAERVAG-EI-GDAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHH-HH-CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHH-Hh-CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            34568999999999999999999999999 999999996533222222 22 2468899999998631            


Q ss_pred             CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc---------CCeEEEEecceeecCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---------GARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                      .++|++|||||......     ..+++...+++|+.++..+++++.+.         +.++|++||...+          
T Consensus        82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~----------  151 (261)
T 3n74_A           82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG----------  151 (261)
T ss_dssp             SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT----------
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc----------
Confidence            26899999999764211     23446678899999998888877432         2269999998754          


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                            .+......|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++................+         ...
T Consensus       152 ------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~  216 (261)
T 3n74_A          152 ------RPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKF---------RDS  216 (261)
T ss_dssp             ------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------
T ss_pred             ------CCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHH---------hhc
Confidence                  23334467999999999999998876   479999999999987753211000001111111         111


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccH
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~  276 (297)
                      .....+++++|+|+++++++....    +..+++.+|..++-
T Consensus       217 ~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          217 IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            122357899999999999996543    45788888876653

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.89  E-value=2.7e-22  Score=164.53  Aligned_cols=216  Identities=15%  Similarity=0.078  Sum_probs=154.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ++|+++||||+|+||+++++.|+++| ++|+++ .|+.....+....+.. ..++.++++|+++...            .
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G-~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENG-YNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999 998886 6643222221111111 2468899999998631            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.               
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------  146 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR---------------  146 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC---------------
Confidence            6899999999654332    23345667899999999998888    44455 899999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++.......  ............++         ..+
T Consensus       147 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~---------~r~  214 (258)
T 3oid_A          147 -YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN--REDLLEDARQNTPA---------GRM  214 (258)
T ss_dssp             -BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT--HHHHHHHHHHHCTT---------SSC
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc--CHHHHHHHHhcCCC---------CCC
Confidence             33345789999999999999988763   7999999999998875322111  11222222322221         246


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      .+++|+|+++++++....    +..+++.+|...
T Consensus       215 ~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          215 VEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             BCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred             cCHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence            789999999999998754    457888887554

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.89  E-value=2.3e-22  Score=165.14  Aligned_cols=208  Identities=15%  Similarity=0.075  Sum_probs=149.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+ ....+. ..+.++++|+++...            .+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   81 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEG-AKVVFGDILDEEGKA-MAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGG   81 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHhh-cCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999 999999986432221 111121 247889999998621            26


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.                
T Consensus        82 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  145 (260)
T 1nff_A           82 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA----------------  145 (260)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC----------------
Confidence            999999999765322    23446678899999996665554    55666 899999987753                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +..+...|+.+|.+.+.+.+.++.+   .++++++++|+.++++.....              ...+.    ......+.
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------------~~~~~----~~~~~~~~  207 (260)
T 1nff_A          146 GTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV--------------PEDIF----QTALGRAA  207 (260)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS--------------CTTCS----CCSSSSCB
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccc--------------hhhHH----hCccCCCC
Confidence            2223467999999999999988876   589999999999998753100              00000    00112478


Q ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      +++|+|+++++++..+.    +..+++.+|...
T Consensus       208 ~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          208 EPVEVSNLVVYLASDESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            89999999999997643    447888887543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.89  E-value=7.7e-22  Score=162.35  Aligned_cols=204  Identities=15%  Similarity=0.083  Sum_probs=149.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+...          ..++.++.+|+++...            .+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   74 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEG-SKVIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEYGS   74 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 999999986432          1357888999998631            26


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||......    ..+++...+++|+.++..+++++.+    .+. ++|++||...+.                
T Consensus        75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------  138 (264)
T 2dtx_A           75 ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI----------------  138 (264)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc----------------
Confidence            999999999765432    2345667889999999988888854    344 899999987652                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHhC--CcEEEEeeccccCCCCCCCChhHH-------H----HHHHHHHcCCCeEEe
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVV-------S----NFIAQAIRGEPLTVQ  235 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ivrp~~v~G~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~  235 (297)
                      +..+...|+.+|.+.+.+.+.++.+..  +++++++||.+.++..    ....       .    .....+....+    
T Consensus       139 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p----  210 (264)
T 2dtx_A          139 ITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLV----RKAAELEVGSDPMRIEKKISEWGHEHP----  210 (264)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHH----HHHHHHHHCSCHHHHHHHHHHHHHHST----
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcch----hhhhhcccccCchhhHHHHHHHHhcCC----
Confidence            233446799999999999999887754  8999999999876531    0110       0    11111111111    


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                           ...+++++|+|+++++++..+.    +..+++.+|..
T Consensus       211 -----~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          211 -----MQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             -----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence                 1247899999999999997642    44677777643

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.89  E-value=1.3e-22  Score=166.97  Aligned_cols=211  Identities=19%  Similarity=0.116  Sum_probs=150.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+          ...+.+|+++..            ..
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~----------~~~~~~Dv~~~~~~~~~~~~~~~~~g   93 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAG-ARVAVADRAVAGIAA----------DLHLPGDLREAAYADGLPGAVAAGLG   93 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEECSSCCTTSCC----------SEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHh----------hhccCcCCCCHHHHHHHHHHHHHhcC
Confidence            3467999999999999999999999999 999999986433221          133467887752            12


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.               
T Consensus        94 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~---------------  158 (266)
T 3uxy_A           94 RLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR---------------  158 (266)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC---------------
Confidence            6999999999876433    23446677889999999999988    55555 899999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCC---hhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD---GRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                       +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++......   ..........+....+         .
T Consensus       159 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p---------~  228 (266)
T 3uxy_A          159 -PGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVP---------L  228 (266)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTST---------T
T ss_pred             -CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCC---------C
Confidence             33445679999999999999888764   799999999999876410000   0000111122222222         2


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      ..+.+++|+|+++++++....    +..+++.+|..++
T Consensus       229 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          229 GRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            357899999999999998653    4478888876543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.89  E-value=1.1e-22  Score=167.46  Aligned_cols=213  Identities=11%  Similarity=0.002  Sum_probs=149.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+.... + ..++.++++|+++...            
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQG-AIVGLHGTREDKLKEIAAD-L-GKDVFVFSANLSDRKSIKQLAEVAEREM   99 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-H-CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH-h-CCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence            34568999999999999999999999999 9999999864332222221 2 2468899999998631            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++||+||......    ..+++...+++|+.++..+.+++    ++.+. ++|++||...+.              
T Consensus       100 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~--------------  165 (266)
T 3grp_A          100 EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV--------------  165 (266)
T ss_dssp             TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC--------------
Confidence            26999999999765322    23456778899999977766665    44565 899999987642              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.....    .......+....++         ..
T Consensus       166 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~p~---------~r  230 (266)
T 3grp_A          166 --GNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL----NEKQKEAIMAMIPM---------KR  230 (266)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC----CHHHHHHHHTTCTT---------CS
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc----CHHHHHHHHhcCCC---------CC
Confidence              2233467999999999999988876   379999999999987642211    12222333333322         24


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      +.+++|+|+++++++....    +..+++.+|.
T Consensus       231 ~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          231 MGIGEEIAFATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            6789999999999997653    4467787763

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.89  E-value=1.9e-22  Score=167.42  Aligned_cols=227  Identities=15%  Similarity=0.066  Sum_probs=158.2

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC--------Cccchhhh---c--CCCceEEEecccCCccc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--------SKDNLRKW---I--GHPRFELIRHDVTEPLL   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--------~~~~~~~~---~--~~~~~~~~~~Dl~~~~~   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+...        ..+.+...   +  ...++.++++|+++...
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADG-ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            3568999999999999999999999999 999999986321        11111111   1  12478899999998631


Q ss_pred             ------------CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCC
Q 022414           96 ------------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVH  157 (297)
Q Consensus        96 ------------~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~  157 (297)
                                  .++|++|||||........+++...+++|+.++..+++++.+    .+  .++|++||...+....  
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  166 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG--  166 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC--
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc--
Confidence                        269999999998765445566788999999999999988743    33  3899999987642110  


Q ss_pred             CCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHH-HcCCCeE
Q 022414          158 PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA-IRGEPLT  233 (297)
Q Consensus       158 ~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~  233 (297)
                                .+......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++....   .......... .......
T Consensus       167 ----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~  233 (278)
T 3sx2_A          167 ----------SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN---EFTREWLAKMAAATDTPG  233 (278)
T ss_dssp             ----------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS---HHHHHHHHHHHHHCC--C
T ss_pred             ----------cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh---hhHHHHHhhccchhhhhh
Confidence                      122334679999999999999888764   6999999999999886432   1222222211 1111111


Q ss_pred             EecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       234 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      ....... ..+++++|+|+++++++....    +..+++.+|-
T Consensus       234 ~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          234 AMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             TTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             hhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            1122222 568899999999999997643    4467887764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.89  E-value=5.3e-22  Score=166.02  Aligned_cols=221  Identities=10%  Similarity=-0.029  Sum_probs=158.7

Q ss_pred             cccccCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc-------
Q 022414           26 SKFFQSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-------   95 (297)
Q Consensus        26 ~~~~~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~-------   95 (297)
                      ..+...+|+++||||+|  +||+++++.|+++| ++|++++|+... .+....... ...+.++++|+++...       
T Consensus        24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  101 (296)
T 3k31_A           24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQG-AEVALTYLSETF-KKRVDPLAESLGVKLTVPCDVSDAESVDNMFKV  101 (296)
T ss_dssp             CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTT-CEEEEEESSGGG-HHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHH
T ss_pred             chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCC-CEEEEEeCChHH-HHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHH
Confidence            34456789999999998  99999999999999 999999997432 122222211 1346789999998621       


Q ss_pred             -----CCcCEEEEccCCCCC--------cccccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCC
Q 022414           96 -----IEVDQIYHLACPASP--------IFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQ  159 (297)
Q Consensus        96 -----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~  159 (297)
                           .++|++|||||....        ....+++...+++|+.++..+++++.+.-   -++|++||...+.       
T Consensus       102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~-------  174 (296)
T 3k31_A          102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK-------  174 (296)
T ss_dssp             HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-------
T ss_pred             HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc-------
Confidence                 269999999997642        12334567789999999999999997642   2899999987642       


Q ss_pred             CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEec
Q 022414          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (297)
                               +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++.....  ..............++    
T Consensus       175 ---------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~p~----  239 (296)
T 3k31_A          175 ---------VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI--SDFHYILTWNKYNSPL----  239 (296)
T ss_dssp             ---------CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC--HHHHHHHHHHHHHSTT----
T ss_pred             ---------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc--cchHHHHHHHHhcCCC----
Confidence                     33345679999999999999888764   79999999999998764321  1122223333332222    


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                           ..+..++|+|+++++++....    +..+++.+|..+.
T Consensus       240 -----~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          240 -----RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             -----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -----CCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCcccc
Confidence                 135688999999999998643    4478888875543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.89  E-value=1.7e-22  Score=167.34  Aligned_cols=224  Identities=16%  Similarity=0.121  Sum_probs=156.1

Q ss_pred             cccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc--------
Q 022414           24 RFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------   95 (297)
Q Consensus        24 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~--------   95 (297)
                      .+..+...+|+++||||+|+||+++++.|+++| ++|++++|+.....+.... + ..++.++++|+++...        
T Consensus        19 ~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           19 YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNG-AYVVVADVNEDAAVRVANE-I-GSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             ---CCTTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-H-CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH-h-CCceEEEEecCCCHHHHHHHHHHH
Confidence            344556678999999999999999999999999 9999999864322222222 2 2468889999998621        


Q ss_pred             ----CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCC
Q 022414           96 ----IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        96 ----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                          .++|++|||||......    ..+++...+++|+.++..+++++.    +.+. ++|++||...+           
T Consensus        96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------  164 (277)
T 4dqx_A           96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT-----------  164 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGT-----------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhC-----------
Confidence                26999999999765432    234456678899999998888874    3444 89999998765           


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCC--ChhHHHHHHHHHHcCCCeEEecC
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                           .+......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++.....  ................+      
T Consensus       165 -----~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~------  233 (277)
T 4dqx_A          165 -----SAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV------  233 (277)
T ss_dssp             -----SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTST------
T ss_pred             -----cCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCc------
Confidence                 233445789999999999999888764   79999999999977531000  00000111111222221      


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                         ...+.+++|+|+++++++....    +..+++.+|..++
T Consensus       234 ---~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          234 ---MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             ---TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             ---ccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence               2346789999999999997653    4578888876543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.89  E-value=2.5e-22  Score=166.44  Aligned_cols=212  Identities=16%  Similarity=0.094  Sum_probs=150.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..++.++.+|+++..            ..
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEG-LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999 9999999964322211111111 236888999999862            12


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc------CC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV------GA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ++|++||+||......    ..+++...+++|+.++..+++++.+.      +. ++|++||...+.             
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~-------------  165 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ-------------  165 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS-------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc-------------
Confidence            6999999999764322    22345678899999999999987654      54 899999987542             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHH-----------HHHHHHHHcCCC
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV-----------SNFIAQAIRGEP  231 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~-----------~~~~~~~~~~~~  231 (297)
                         +..+...|+.+|.+.+.+.+.++.+.   ++++++++|+.++++..    ....           ......+....+
T Consensus       166 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p  238 (277)
T 2rhc_B          166 ---GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA----ASVREHYSDIWEVSTEEAFDRITARVP  238 (277)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHH----HHHHHHHHHHHTCCHHHHHHHHHHHST
T ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchh----hhhhhhcccccccchHHHHHHHHhcCC
Confidence               22334679999999999999888763   69999999999987641    1111           111111111111


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                               ...+++++|+|+++++++..+.    +..+++.+|
T Consensus       239 ---------~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          239 ---------IGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             ---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---------CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence                     1247899999999999997653    446787776

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.89  E-value=9.6e-23  Score=166.90  Aligned_cols=215  Identities=16%  Similarity=0.123  Sum_probs=129.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------   94 (297)
                      +...+++++||||+|+||+++++.|+++| ++|++++|+.....+....+. ....+.++.+|+++..            
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREG-AAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            44568999999999999999999999999 999999996433222222221 1246888999999862            


Q ss_pred             cCCcCEEEEccCCCCC-------cccccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASP-------IFYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                      ..++|++|||||....       ....+++...+++|+.++..+.+++    ++.+. ++|++||...+.          
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  153 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL----------  153 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC----------
Confidence            1279999999997421       1123446678899999966666555    44555 899999988652          


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                               +...|+.+|.+.+.+.+.++.+.   +++++.++|+.++++.....   ....+...+..+.         
T Consensus       154 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~---------  212 (253)
T 3qiv_A          154 ---------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT---TPKEMVDDIVKGL---------  212 (253)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc---CcHHHHHHHhccC---------
Confidence                     12459999999999999998874   79999999999998753211   1112222222221         


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      ....+.+++|+|+++++++....    +..|++.+|..+
T Consensus       213 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          213 PLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             -------CCHHHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeec
Confidence            22346678999999999997543    457888887654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.89  E-value=3.4e-23  Score=175.35  Aligned_cols=233  Identities=14%  Similarity=0.007  Sum_probs=165.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC---------CCccchhhhc--CCCceEEEecccCCccc---
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT---------GSKDNLRKWI--GHPRFELIRHDVTEPLL---   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~---------~~~~~~~~~~--~~~~~~~~~~Dl~~~~~---   95 (297)
                      ..+++++||||+|+||+++++.|+++| ++|++++|+..         ...+.....+  ....+.++.+|+++...   
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEG-ARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            467999999999999999999999999 99999988620         1111111111  12467889999998621   


Q ss_pred             ---------CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc-----------CCeEEEEecceee
Q 022414           96 ---------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-----------GARILLTSTSEVY  151 (297)
Q Consensus        96 ---------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----------~~r~v~~Ss~~~~  151 (297)
                               .++|++|||||......    ..+++...+++|+.++..+++++.+.           +.++|++||...+
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  183 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL  183 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence                     26999999999765432    23456678899999999998887432           1389999998765


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHc
Q 022414          152 GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR  228 (297)
Q Consensus       152 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~  228 (297)
                      .                +......|+.+|.+.+.+.+.++.+   .+++++.++|| +..+..........         
T Consensus       184 ~----------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~---------  237 (322)
T 3qlj_A          184 Q----------------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM---------  237 (322)
T ss_dssp             H----------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-----------
T ss_pred             c----------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh---------
Confidence            2                2233467999999999999998877   57999999999 65544221111000         


Q ss_pred             CCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc-----------------cHHHHHHHHHHhh
Q 022414          229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF-----------------TMLELAENVKEVN  287 (297)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~-----------------s~~e~~~~i~~~~  287 (297)
                             ........++.++|+|+++++++....    +..+++.+|...                 +..|+++.+.+.+
T Consensus       238 -------~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~  310 (322)
T 3qlj_A          238 -------ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLL  310 (322)
T ss_dssp             -------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHH
T ss_pred             -------hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHh
Confidence                   011112245689999999999997643    446777776544                 6799999999999


Q ss_pred             cccCceeec
Q 022414          288 FYLGRLLVC  296 (297)
Q Consensus       288 g~~~~~~~~  296 (297)
                      |.+.+++++
T Consensus       311 ~~~~~~~~~  319 (322)
T 3qlj_A          311 GKARPPVPV  319 (322)
T ss_dssp             HHSCCCCCC
T ss_pred             hccCCCCCC
Confidence            987655543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.89  E-value=7.4e-22  Score=163.34  Aligned_cols=219  Identities=13%  Similarity=0.034  Sum_probs=150.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ...++.++.+|+++..            .
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLG-ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3567999999999999999999999999 999999996432222111111 1246888999998862            1


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       .++|++||+||......    ..+++...+++|+.++..+++++.    +.+. ++|++||...+.             
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-------------  163 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS-------------  163 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS-------------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC-------------
Confidence             46999999999754322    234466778899999999998883    4555 899999988763             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChh--HHHHHHHHHHcCCCeEEecCCce
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                         +......|+.+|.+.+.+.+.++.+.   +++++.++|+.++++........  ........+....++        
T Consensus       164 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~--------  232 (273)
T 1ae1_A          164 ---ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM--------  232 (273)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT--------
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC--------
Confidence               22334679999999999999888764   89999999999998863211000  001112222221111        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                       ..+.+++|+|+++++++....    +..+++.+|..
T Consensus       233 -~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          233 -GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -CCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence             136799999999999987542    44677877643

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.89  E-value=4.1e-22  Score=165.31  Aligned_cols=217  Identities=12%  Similarity=-0.005  Sum_probs=152.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ...+.++.+|+++...            .
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARG-IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999 9999999965332222222211 2468899999998631            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH------cCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR------VGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~------~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ++|++|||||......    ..+++...+++|+.++..+++++.+      .+. ++|++||...+.             
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~-------------  167 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ-------------  167 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS-------------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc-------------
Confidence            6999999999765432    2334566788999999999998754      455 899999987642             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC------Chh-HHHHHHHHHHcCCCeEEe
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID------DGR-VVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~------~~~-~~~~~~~~~~~~~~~~~~  235 (297)
                         +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.....      ... ........+....++   
T Consensus       168 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---  241 (279)
T 3sju_A          168 ---GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL---  241 (279)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT---
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC---
Confidence               3334467999999999999998876   579999999999987531000      000 011222222222221   


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                            ..+..++|+|+++++++....    +..+++.+|.
T Consensus       242 ------~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          242 ------GRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             ------SSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             ------CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence                  246789999999999998653    4467887763

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=1.1e-21  Score=159.88  Aligned_cols=209  Identities=15%  Similarity=0.081  Sum_probs=150.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~v  101 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+....    .......++.++.+|+++..        ..++|++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l   78 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREG-AKVIATDINESKL----QELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVL   78 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHH----GGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHH----HHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEE
Confidence            357999999999999999999999999 9999999864322    11111136888999999863        2369999


Q ss_pred             EEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC
Q 022414          102 YHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (297)
Q Consensus       102 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  172 (297)
                      ||+||......    ..+++...+++|+.++..+++++.    +.+. ++|++||...+...               ..+
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------~~~  143 (246)
T 2ag5_A           79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG---------------VVN  143 (246)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC---------------CTT
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC---------------CCC
Confidence            99999765432    224456678999999999988874    3455 89999998764211               113


Q ss_pred             CChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHH------HHHHHHHHcCCCeEEecCCceeEe
Q 022414          173 RSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV------SNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      ...|+.+|.+.+.+.+.++.+.   ++++++++|+.++++...    ...      ......+....+.         ..
T Consensus       144 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~---------~~  210 (246)
T 2ag5_A          144 RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQ----ERIQARGNPEEARNDFLKRQKT---------GR  210 (246)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHH----HHHHHSSSHHHHHHHHHHTCTT---------SS
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchh----hhhhcccCcHHHHHHHHhcCCC---------CC
Confidence            4679999999999999988764   899999999999987421    101      1122222222211         13


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      +.+++|+|+++++++..+.    +..+++.+|
T Consensus       211 ~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          211 FATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             CEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            6799999999999997643    446777765

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=4.8e-22  Score=162.29  Aligned_cols=206  Identities=12%  Similarity=0.000  Sum_probs=144.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------C-
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------I-   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~-   96 (297)
                      ++|+|+||||+|+||+++++.|+++|. ++|++++|+..... .+... ...++.++.+|+++...            . 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~-~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-ELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH-HHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH-HHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999999985 78999999654332 22222 23478899999998621            1 


Q ss_pred             -CcCEEEEccCCCC-Ccc----cccChhhhHHHhHHHHHHHHHHHHHc----------C-----C-eEEEEecceeecCC
Q 022414           97 -EVDQIYHLACPAS-PIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----------G-----A-RILLTSTSEVYGDP  154 (297)
Q Consensus        97 -~~d~vi~~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----------~-----~-r~v~~Ss~~~~~~~  154 (297)
                       ++|++||+||... ...    ..++....+++|+.++..+++++.+.          +     . ++|++||...+...
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence             7999999999765 211    23446678899999999988887542          3     4 89999998765322


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCC
Q 022414          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP  231 (297)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  231 (297)
                      ..    ..     ++..+...|+.+|.+.+.+++.++.+.   +++++.++|+.+.++...                .  
T Consensus       160 ~~----~~-----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----------------~--  212 (250)
T 1yo6_A          160 NT----SG-----SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG----------------K--  212 (250)
T ss_dssp             CC----ST-----TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------
T ss_pred             cc----cc-----cccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC----------------C--
Confidence            10    11     222455789999999999999988764   799999999988765410                0  


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC---CccEEecCCCccc
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNPGEFT  275 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s  275 (297)
                                ..+++++|+|+.++.++..+.   +|.|...+++.++
T Consensus       213 ----------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  249 (250)
T 1yo6_A          213 ----------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             ----------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             ----------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCCC
Confidence                      135789999999999998765   6666665555444

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.89  E-value=2.9e-22  Score=167.97  Aligned_cols=212  Identities=13%  Similarity=0.022  Sum_probs=144.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+++|+||||+|+||+++++.|+++| ++|++++|+.....+....+. ....+.++++|+++...            .
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRG-ARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            467999999999999999999999999 999999996543322222221 12468899999998632            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcC-C-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-A-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++|||||......    ..++....+++|+.++..+++++.    +.+ . ++|++||...+.              
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  173 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV--------------  173 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS--------------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC--------------
Confidence            6999999999765432    234466788999999999998873    344 3 899999987652              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHH-HHHHHHcCCCeEEecCCceeE
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSN-FIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        +......|+.+|.+.+.+.+.++.+.   +++++.++||.+..+...    ..... .........+....+......
T Consensus       174 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (301)
T 3tjr_A          174 --PNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVS----NSERIRGADYGMSATPEGAFGPLPTQD  247 (301)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHH----HHHHHC---------------------
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccc----ccccccchhhccccChhhhcccccccc
Confidence              33345689999999999999888763   799999999988765310    00000 000000111111112233345


Q ss_pred             eeeeHHHHHHHHHHHHhcCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~  262 (297)
                      .+++++|+|++++.+++.+.
T Consensus       248 ~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          248 ESVSADDVARLTADAILANR  267 (301)
T ss_dssp             -CCCHHHHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHHhcCC
Confidence            68999999999999999863

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.89  E-value=2.7e-22  Score=166.45  Aligned_cols=215  Identities=15%  Similarity=0.032  Sum_probs=142.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~------------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|......+.....+  ...++.++++|+++...            
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASG-FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCC-CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999 999999864322222221111  12468899999998732            


Q ss_pred             CCcCEEEEccCCCC--Ccc----cccChhhhHHHhHHHHHHHHHHHHHc----C---C-eEEEEecceeecCCCCCCCCC
Q 022414           96 IEVDQIYHLACPAS--PIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G---A-RILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        96 ~~~d~vi~~a~~~~--~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~-r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                      .++|++|||||...  ...    ..+++...+++|+.++..+++++.+.    +   . ++|++||...+.         
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~---------  176 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM---------  176 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc---------
Confidence            26999999999732  111    33456677889999999888887442    2   3 899999987652         


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                             +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++....    ...........+        .
T Consensus       177 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~--------~  237 (280)
T 4da9_A          177 -------TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA----VSGKYDGLIESG--------L  237 (280)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------------
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh----cchhHHHHHhhc--------C
Confidence                   2333467999999999999998877   47999999999998875321    111111111110        1


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      .....+..++|+|+++++++....    +..+++.+|..
T Consensus       238 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          238 VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             ----CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            122357899999999999998765    45788887654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.89  E-value=2.1e-22  Score=166.64  Aligned_cols=213  Identities=15%  Similarity=0.062  Sum_probs=143.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc------------C
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      .+++|+||||+|+||+++++.|+++| ++|+++.+......+.+...+  ...++.++.+|+++...            .
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQG-WRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            46889999999999999999999999 888777443222222222211  12468899999998621            2


Q ss_pred             CcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc-------CC-eEEEEecceeecCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV-------GA-RILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~-r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      ++|++|||||......     ..+++...+++|+.++..+++++.+.       +. ++|++||...+..          
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  173 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG----------  173 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC----------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC----------
Confidence            6899999999765311     33456778999999999999888553       23 7999999876532          


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                           .......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++....   ..............         .
T Consensus       174 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~---------~  236 (272)
T 4e3z_A          174 -----SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS---GGLPDRAREMAPSV---------P  236 (272)
T ss_dssp             -----CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------------CC---------T
T ss_pred             -----CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc---cCChHHHHHHhhcC---------C
Confidence                 11123569999999999999888764   8999999999999875321   11111111111111         1


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      ...+.+++|+|+++++++....    +..+++.+|
T Consensus       237 ~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          237 MQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            1246689999999999997543    446788765

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.89  E-value=5e-22  Score=162.03  Aligned_cols=212  Identities=14%  Similarity=0.076  Sum_probs=154.4

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------C
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+. ...+. .....+++|+++...            .
T Consensus         6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            6 NLEGKVALVTGASRGIGKAIAELLAERG-AKVIGTATSESGAQAI-SDYLG-DNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHH-HHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHH-HHHhc-ccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            3567999999999999999999999999 9999999864332222 12221 357789999998631            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||......    ..+++...+++|+.++..+++++.+    .+. ++|++||...+.               
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------  147 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---------------  147 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC---------------
Confidence            6999999999765432    3345667889999999999988743    455 899999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +..+...|+.+|.+.+.+.+.++.+   .+++++.++||.+..+......    ...........+.         ..+
T Consensus       148 -~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~p~---------~r~  213 (248)
T 3op4_A          148 -GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN----DEQRTATLAQVPA---------GRL  213 (248)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC----HHHHHHHHHTCTT---------CSC
T ss_pred             -CCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC----HHHHHHHHhcCCC---------CCC
Confidence             2334467999999999999988876   3799999999999887643221    1222222222221         247


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      .+++|+|+++++++....    +..+++.+|.
T Consensus       214 ~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          214 GDPREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             cCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence            799999999999997653    4467777764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.89  E-value=6.3e-22  Score=164.39  Aligned_cols=221  Identities=16%  Similarity=0.108  Sum_probs=153.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC---------Cccchh---hhcC--CCceEEEecccCCcc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG---------SKDNLR---KWIG--HPRFELIRHDVTEPL   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~---------~~~~~~---~~~~--~~~~~~~~~Dl~~~~   94 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+...         ..+.+.   ..+.  ..++.++++|+++..
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEG-ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            3567999999999999999999999999 999999984211         111111   1111  246888999999863


Q ss_pred             c------------CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcC-C-eEEEEecceeec
Q 022414           95 L------------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-A-RILLTSTSEVYG  152 (297)
Q Consensus        95 ~------------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~-r~v~~Ss~~~~~  152 (297)
                      .            .++|++|||||......    ..++++..+++|+.++..+++++.    +.+ . ++|++||...+.
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  170 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK  170 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence            1            26999999999765433    234456788899999999988873    333 3 899999987652


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHH-Hc
Q 022414          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA-IR  228 (297)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~-~~  228 (297)
                                      +......|+.+|.+.+.+.+.++.+   .+++++.++||.++++...   ........... ..
T Consensus       171 ----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~---~~~~~~~~~~~~~~  231 (280)
T 3pgx_A          171 ----------------ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE---PEAMMEIFARHPSF  231 (280)
T ss_dssp             ----------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC---HHHHHHHHHHCGGG
T ss_pred             ----------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc---hhhhhhhhhcCchh
Confidence                            3334567999999999999998876   5899999999999998632   11111111110 00


Q ss_pred             CCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      ...+.. ...... .+++++|+|+++++++....    +..+++.+|
T Consensus       232 ~~~~~~-~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  276 (280)
T 3pgx_A          232 VHSFPP-MPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG  276 (280)
T ss_dssp             GGGSCC-BTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred             hhhhhh-cccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            011111 111112 48899999999999997654    446777765

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.89  E-value=4.9e-22  Score=163.90  Aligned_cols=214  Identities=13%  Similarity=0.060  Sum_probs=150.3

Q ss_pred             ccCCCEEEEEcCCc-hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc----------
Q 022414           29 FQSNMRILVTGGAG-FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG-~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~----------   95 (297)
                      ...+|+++||||+| .||+++++.|+++| ++|++++|+.....+....+..  ..++.++++|+++...          
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEG-ADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            35689999999998 59999999999999 9999999975433322222211  2478999999998621          


Q ss_pred             --CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc-----CC-eEEEEecceeecCCCCCCCCCCC
Q 022414           96 --IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-----GA-RILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                        .++|++||+||......    ..+++...+++|+.++.++++++.+.     +. ++|++||...+            
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------------  165 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW------------  165 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT------------
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc------------
Confidence              26899999999765433    23446678899999999999888653     34 79999998764            


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                          .+..+...|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.....   ........+.         ....
T Consensus       166 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~---------~~~~  229 (266)
T 3o38_A          166 ----RAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT---SSSELLDRLA---------SDEA  229 (266)
T ss_dssp             ----CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------------CCT
T ss_pred             ----CCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc---CcHHHHHHHH---------hcCC
Confidence                23344578999999999999988876   579999999999987652111   0011111111         1122


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      ...+.+++|+|+++++++....    +..+++.+|
T Consensus       230 ~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  264 (266)
T 3o38_A          230 FGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ  264 (266)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             cCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCC
Confidence            2357899999999999998643    446777765

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.89  E-value=8.2e-22  Score=162.27  Aligned_cols=214  Identities=11%  Similarity=0.115  Sum_probs=154.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ...++.++++|+++..            ..
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQG-ADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999 999999996433222222211 1246889999999863            22


Q ss_pred             CcCEEEEccCCCCC-cc----cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||.... ..    ..+++...+++|+.++..+++++.+    .+.++|++||...+.               
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  152 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRH---------------  152 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGC---------------
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhcc---------------
Confidence            69999999987432 11    2344667889999999999888743    345899999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH-----------HHHHHHHHcCCCeE
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV-----------SNFIAQAIRGEPLT  233 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~  233 (297)
                       +......|+.+|.+.+.+.+.++.+   .+++++.++||.++++..    ..+.           ..+......+.+  
T Consensus       153 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p--  225 (264)
T 3ucx_A          153 -SQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTL----KSYFEHQAGKYGTSVEDIYNAAAAGSD--  225 (264)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHH----HHHHHHHHHHTTCCHHHHHHHHHTTSS--
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccH----HHHHHhhhhhcCCCHHHHHHHHhccCC--
Confidence             3334467999999999999988876   579999999999988642    1111           122222222222  


Q ss_pred             EecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       234 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                             ...+.+++|+|+++++++....    +..+++.+|..
T Consensus       226 -------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          226 -------LKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             -------SSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             -------cccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence                   2347899999999999997643    45778887754

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.89  E-value=2.4e-21  Score=163.77  Aligned_cols=248  Identities=17%  Similarity=0.078  Sum_probs=155.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhh---c--CCCceEEEecccCCccc--------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKW---I--GHPRFELIRHDVTEPLL--------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~---~--~~~~~~~~~~Dl~~~~~--------   95 (297)
                      +.+|+++||||+|+||+++++.|+++| ++|+++.|+.... .+.+...   .  ....+..+.+|+++...        
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G-~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAG-HRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            457899999999999999999999999 9999999864332 2222221   1  12468899999998621        


Q ss_pred             ----CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCC
Q 022414           96 ----IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        96 ----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                          .++|++|||||......    ..++....+++|+.++..+++++    ++.+. ++|++||...+..         
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~---------  152 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG---------  152 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC---------
Confidence                27999999999754322    23445677899999999999998    66666 8999999876521         


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChh--HHHHHHHHHHcCCCeEEecC
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  237 (297)
                            .......|+.+|.+.+.+.+.++.+   .++++++++||.+.++........  ....................
T Consensus       153 ------~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (324)
T 3u9l_A          153 ------TPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEE  226 (324)
T ss_dssp             ------CCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHH
T ss_pred             ------CCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHH
Confidence                  1122357999999999999998876   489999999999986542111000  00000000000000000000


Q ss_pred             ---C--ceeEeeeeHHHHHHHHHHHHhcCC--CccEEecCCCccc-------HHHHHHHHHHhhcccCce
Q 022414          238 ---G--TQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFT-------MLELAENVKEVNFYLGRL  293 (297)
Q Consensus       238 ---~--~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s-------~~e~~~~i~~~~g~~~~~  293 (297)
                         .  ....+..+++|+|++++.++..+.  ...+.+.++....       ..++.+.+.+.+|....+
T Consensus       227 ~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  296 (324)
T 3u9l_A          227 IKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGADVGFSVLDRLRAEMLHRVGLSDLL  296 (324)
T ss_dssp             HHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCSHHHHHHHHHHHHHHHHHHTTCGGGG
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchHHHHHHHHHHHHHHHHHHHcChHhhc
Confidence               0  000012578999999999999874  3344444443444       444445555566655433

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.89  E-value=2.2e-22  Score=166.03  Aligned_cols=219  Identities=16%  Similarity=0.135  Sum_probs=150.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCccc-----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+   ....++.++.+|+++...           
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEG-AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999 99999999653222211111   113468889999998631           


Q ss_pred             -CCcCEEEEccCCCCC-cc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       .++|++||+||.... ..    ..++++..+++|+.++..+++++    ++.+. ++|++||...+.            
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------  157 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR------------  157 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc------------
Confidence             268999999997543 11    23446678899998887665554    45555 899999987642            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC----ChhHHHHHHHHHHcCCCeEEecC
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID----DGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                          +..+...|+.+|.+.+.+.+.++.+   .+++++.++||.++++.....    ...........+....+      
T Consensus       158 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p------  227 (267)
T 1iy8_A          158 ----GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP------  227 (267)
T ss_dssp             ----BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT------
T ss_pred             ----CCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC------
Confidence                2233467999999999999988766   479999999999987641100    00000001111222111      


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                         ...+.+++|+|+++++++..+.    +..+++.+|..+
T Consensus       228 ---~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          228 ---SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             ---TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             ---CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence               1247899999999999997652    446778776544

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.89  E-value=2.9e-22  Score=166.46  Aligned_cols=223  Identities=16%  Similarity=0.091  Sum_probs=152.4

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~-----------   95 (297)
                      +...+++++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ...+.++++|+++...           
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADG-VTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34567899999999999999999999999 9999999965332222222211 2468889999998621           


Q ss_pred             -CCcCEEEEccCCCCC-c----ccccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       .++|++|||||.... .    ...+++...+++|+.++..+++++    ++.+. ++|++||...+..           
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------  171 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT-----------  171 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB-----------
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC-----------
Confidence             269999999997543 1    123446678999999999999988    55565 8999999875421           


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                         .+..+...|+.+|.+.+.+.+.++.+   .+++++.++||.+..+.........  .    ................
T Consensus       172 ---~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~----~~~~~~~~~~~~~~p~  242 (283)
T 3v8b_A          172 ---FTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH--E----EETAIPVEWPKGQVPI  242 (283)
T ss_dssp             ---CCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCC--H----HHHSCCCBCTTCSCGG
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccccc--c----hhhhhhhhhhhhcCcc
Confidence               12234567999999999999999877   4699999999999887643211000  0    0000000000000011


Q ss_pred             --EeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          242 --RSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       242 --~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                        ..+..++|+|+++++++....    +..+++.+|
T Consensus       243 ~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          243 TDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             GTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence              246789999999999997643    446777765

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.89  E-value=3e-22  Score=164.56  Aligned_cols=221  Identities=11%  Similarity=0.027  Sum_probs=147.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC---CCceEEEecccCCccc------------
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~------------   95 (297)
                      .+|+++||||+|+||+++++.|+++| ++|++++|+.....+.....+.   ..++.++.+|+++...            
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQG-ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcC-CEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999 9999999865330111111111   2367889999998631            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||......    ..+++...+++|+.++..+++++.    +.+. ++|++||...+.              
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  147 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--------------  147 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc--------------
Confidence            26999999999764322    234466788999999998888874    3455 899999987652              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHH--HcCCCeEEe-cCCce
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA--IRGEPLTVQ-APGTQ  240 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~  240 (297)
                        +..+...|+.+|.+.+.+.+.++.+.   +++++.++||.+.++....    .........  ......... .....
T Consensus       148 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p  221 (260)
T 1x1t_A          148 --ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK----QISALAEKNGVDQETAARELLSEKQP  221 (260)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------CHHHHCT
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHH----hhhhhccccCCchHHHHHHHhhccCC
Confidence              22334679999999999999888764   7999999999999875321    100000000  000000000 00001


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      ...+++++|+|+++++++....    +..+++.+|.
T Consensus       222 ~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          222 SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            1357899999999999997642    4467777763

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.89  E-value=5.3e-22  Score=163.56  Aligned_cols=218  Identities=16%  Similarity=0.090  Sum_probs=155.4

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.  ...++.++++|+++...           
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAG-ARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 999999996433222222211  13478899999998732           


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       .++|++|||||......    ..+++...+++|+.++..+++++.+    .+  .++|++||...+.            
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------------  163 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA------------  163 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc------------
Confidence             26999999999765433    2344567889999999999888743    33  3899999987652            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                          +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.......  .......+....++         
T Consensus       164 ----~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~---------  228 (266)
T 4egf_A          164 ----PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG--DEAKSAPMIARIPL---------  228 (266)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC--SHHHHHHHHTTCTT---------
T ss_pred             ----CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc--ChHHHHHHHhcCCC---------
Confidence                3334567999999999999988876   47999999999998764110000  01222223333222         


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      ..+..++|+|+++++++....    +..+++.+|..+
T Consensus       229 ~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          229 GRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence            246789999999999998643    446888876543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.89  E-value=1.3e-21  Score=162.77  Aligned_cols=221  Identities=15%  Similarity=0.065  Sum_probs=153.2

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCcc----------
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPL----------   94 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~----------   94 (297)
                      .+...+|+++||||+|+||+++++.|+++| ++|++++|+.....+.....+  ...++.++.+|+++..          
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRG-CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            344568999999999999999999999999 999999986432212211111  1236888999998862          


Q ss_pred             --cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc--CC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV--GA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                        ..++|++|||||......    ..+++...+++|+.++..+++++.+.  +. ++|++||...+..            
T Consensus       103 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------  170 (283)
T 1g0o_A          103 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK------------  170 (283)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS------------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC------------
Confidence              126999999999765322    23456778999999999999999875  44 8999999875421            


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCC-------CChhHHHHHHHHHHc--CCCeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNI-------DDGRVVSNFIAQAIR--GEPLT  233 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~-------~~~~~~~~~~~~~~~--~~~~~  233 (297)
                         ...+...|+.+|.+.+.+.+.++.+   .++++++++||.+.++....       ............+..  ..++ 
T Consensus       171 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-  246 (283)
T 1g0o_A          171 ---AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL-  246 (283)
T ss_dssp             ---SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT-
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCC-
Confidence               1112467999999999999988865   47999999999998763110       000000111112211  1111 


Q ss_pred             EecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       234 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                              ..+.+++|+|+++++++....    +..+++.+|.
T Consensus       247 --------~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          247 --------RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             --------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             --------CCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence                    236789999999999998643    3467777653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.89  E-value=1.3e-21  Score=162.03  Aligned_cols=213  Identities=15%  Similarity=0.118  Sum_probs=149.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+....++.++.+|+++..            ..+
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAG-ARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSAR  105 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            567999999999999999999999999 9999999864322221222211126788899999862            126


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcC-----CeEEEEecceeecCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-----ARILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-----~r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      +|++|||||......    ..+++...+++|+.++..+++++.    +.+     .++|++||...+..           
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~-----------  174 (276)
T 2b4q_A          106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA-----------  174 (276)
T ss_dssp             CSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC-----------
Confidence            999999999765322    234466788999999988877763    333     38999999876531           


Q ss_pred             CCCCCCCCCC-hHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHc--CCCeEEecCC
Q 022414          165 GNVNPIGVRS-CYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR--GEPLTVQAPG  238 (297)
Q Consensus       165 ~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  238 (297)
                           ..... .|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++..    .............  ..++      
T Consensus       175 -----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~----~~~~~~~~~~~~~~~~~p~------  239 (276)
T 2b4q_A          175 -----MGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMT----RHIANDPQALEADSASIPM------  239 (276)
T ss_dssp             -----CCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTT----HHHHHCHHHHHHHHHTSTT------
T ss_pred             -----CCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcch----hhcchhHHHHHHhhcCCCC------
Confidence                 11223 6999999999999988876   379999999999987752    1111111111111  1111      


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                         ..+.+++|+|+++++++..+.    +..+++.+|.
T Consensus       240 ---~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          240 ---GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             ---SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             ---CCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence               237799999999999997642    4467777653

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.89  E-value=8.8e-22  Score=162.30  Aligned_cols=215  Identities=17%  Similarity=0.072  Sum_probs=150.7

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh--cCCCceEEEecccCCccc---------
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPLL---------   95 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~---------   95 (297)
                      .....+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+  .....+.++.+|+++...         
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAG-CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   94 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            344567999999999999999999999999 99999999643222211111  012367888999998621         


Q ss_pred             ---CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecce-eecCCCCCCCCCC
Q 022414           96 ---IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSE-VYGDPLVHPQDES  162 (297)
Q Consensus        96 ---~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~-~~~~~~~~~~~e~  162 (297)
                         .++|++||+||......    ..+++...+++|+.++..+++++.    +.+. ++|++||.. .+           
T Consensus        95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------  163 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE-----------  163 (267)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-----------
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc-----------
Confidence               26999999999765332    223456678999999999988773    3454 899999976 32           


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH--HHHHHHHHcCCCeEEecC
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  237 (297)
                           .+..+...|+.+|.+.+.+.+.++.+   .++++++++||.+.++..    ....  ......+....++     
T Consensus       164 -----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~----~~~~~~~~~~~~~~~~~p~-----  229 (267)
T 1vl8_A          164 -----VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT----EAVFSDPEKLDYMLKRIPL-----  229 (267)
T ss_dssp             -----CCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT----HHHHTCHHHHHHHHHTCTT-----
T ss_pred             -----cCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccc----cccccChHHHHHHHhhCCC-----
Confidence                 12233467999999999999988876   489999999999987652    1111  1222222222211     


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                          ..+++++|+|+++++++....    +..+.+.+|
T Consensus       230 ----~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  263 (267)
T 1vl8_A          230 ----GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  263 (267)
T ss_dssp             ----SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence                136789999999999997642    345677665

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.89  E-value=2.2e-22  Score=165.21  Aligned_cols=214  Identities=11%  Similarity=0.044  Sum_probs=151.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~------------   95 (297)
                      ..+|+|+||||+|+||+++++.|+++| ++|++++|+.....+.+...+  ...++.++.+|+++...            
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAG-AKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            357999999999999999999999999 999999997322222222111  12468899999998631            


Q ss_pred             CCcCEEEEccCC-CCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC------CeEEEEecceeecCCCCCCCC
Q 022414           96 IEVDQIYHLACP-ASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG------ARILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        96 ~~~d~vi~~a~~-~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~r~v~~Ss~~~~~~~~~~~~~  160 (297)
                      .++|+|||+||. .....    ..+++...+++|+.++..+++++.+    .+      .++|++||...+..       
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------  156 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-------  156 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-------
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-------
Confidence            169999999996 32221    1233566789999999988886632    22      47999999876531       


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                              +..+...|+.+|.+.+.+.+.++.+.   +++++++||+.++++.....    ...+...+..+.++     
T Consensus       157 --------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~~-----  219 (258)
T 3afn_B          157 --------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK----TQDVRDRISNGIPM-----  219 (258)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC----CHHHHHHHHTTCTT-----
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc----CHHHHHHHhccCCC-----
Confidence                    22334679999999999999888764   89999999999999864321    12233333333221     


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcC---C--CccEEecCCC
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGE---N--TGPINIGNPG  272 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~---~--~~~~~i~~~~  272 (297)
                          .++++++|+|++++.++..+   .  +..|++.+|.
T Consensus       220 ----~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          220 ----GRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             ----CSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             ----CcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence                25789999999999998753   1  4478887764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.89  E-value=2e-22  Score=166.69  Aligned_cols=225  Identities=12%  Similarity=0.004  Sum_probs=159.0

Q ss_pred             cccCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc----------
Q 022414           28 FFQSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL----------   94 (297)
Q Consensus        28 ~~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~----------   94 (297)
                      ....+|+|+||||+  |+||+++++.|+++| ++|++++|+.. ..+.+.... ....+.++++|+++..          
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G-~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREG-AELAFTYVGDR-FKDRITEFAAEFGSELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTT-CEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcC-CCEEEEecchh-hHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            44568999999999  999999999999999 99999998732 222222221 1235788999999862          


Q ss_pred             --cCCcCEEEEccCCCCCc---------ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPI---------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~  160 (297)
                        ..++|++|||||.....         ...+++...+++|+.++..+++++.+.   +.++|++||...+.        
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~--------  159 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER--------  159 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS--------
T ss_pred             HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc--------
Confidence              12689999999976531         233456678899999999999999765   23799999987652        


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                              +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++.....  .........+....++     
T Consensus       160 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~-----  224 (271)
T 3ek2_A          160 --------AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI--KSFGKILDFVESNSPL-----  224 (271)
T ss_dssp             --------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC--HHHHHHHHHHHHHSTT-----
T ss_pred             --------CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc--cchHHHHHHHHhcCCc-----
Confidence                    33345789999999999999888763   79999999999988753221  1223333333333222     


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccHHHHHH
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAE  281 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~e~~~  281 (297)
                          ..+..++|+|+++++++....    +..+++.+|..++..++.+
T Consensus       225 ----~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          225 ----KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             ----SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             ----CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence                135689999999999998643    4578999888777666543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.89  E-value=4.5e-22  Score=162.99  Aligned_cols=208  Identities=14%  Similarity=0.124  Sum_probs=148.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCe-EEEEecCCCC-CccchhhhcCCCceEEEecccCCc-cc-----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFTG-SKDNLRKWIGHPRFELIRHDVTEP-LL-----------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~-v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~-~~-----------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++ |++++|+... ..+.+.......++.++.+|+++. ..           
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G-~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRN-LKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTC-CSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCC-CcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            457999999999999999999999999 75 8999886521 111222222234688899999986 21           


Q ss_pred             -CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc--------CCeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV--------GARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                       .++|++||+||...    .+++...+++|+.++..+++++.+.        +.++|++||...+.              
T Consensus        82 ~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  143 (254)
T 1sby_A           82 LKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--------------  143 (254)
T ss_dssp             HSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--------------
T ss_pred             cCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc--------------
Confidence             26999999999742    4667889999999999999988542        23799999988752              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH--HHHHHHHHcCCCeEEecCCcee
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                        +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++....... +.  ..........            
T Consensus       144 --~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~------------  208 (254)
T 1sby_A          144 --AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNS-WLDVEPRVAELLLS------------  208 (254)
T ss_dssp             --CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCC-GGGSCTTHHHHHTT------------
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccch-hhhhhHHHHHHHhc------------
Confidence              2233467999999999999888765   58999999999998864211000 00  0001111111            


Q ss_pred             EeeeeHHHHHHHHHHHHhcCCCc-cEEecCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGENTG-PINIGNP  271 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~~~-~~~i~~~  271 (297)
                      .++.+++|+|++++.+++....| .|++.+|
T Consensus       209 ~~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG  239 (254)
T 1sby_A          209 HPTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             SCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence            12348999999999999866644 6777776

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.89  E-value=2.5e-22  Score=164.46  Aligned_cols=211  Identities=16%  Similarity=0.132  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~~   98 (297)
                      .+|+++||||+|+||+++++.|+++| ++|++++|+.....+.... + ...+.++.+|+++...            .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAG-ARVVLADVLDEEGAATARE-L-GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHT-T-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH-h-CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999 9999999864322211111 1 2357888999988621            269


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHH----HHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNML----GLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~----~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++||+||......    ..+++...+++|+.++..++    ..+++.+. ++|++||...+.                +
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  144 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----------------G  144 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------C
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc----------------C
Confidence            99999999764322    23446678899999887544    44556666 899999987652                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee-
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC-  245 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-  245 (297)
                      ..+...|+.+|.+.+.+.+.++.+   .++++++++|+.++++..        ..+    .......+ ........+. 
T Consensus       145 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--------~~~----~~~~~~~~-~~~~p~~~~~~  211 (254)
T 1hdc_A          145 LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT--------AET----GIRQGEGN-YPNTPMGRVGN  211 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--------HHH----TCCCSTTS-CTTSTTSSCB-
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc--------ccc----chhHHHHH-HhcCCCCCCCC
Confidence            233467999999999999988876   379999999999987531        111    00000000 0001112367 


Q ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      +++|+|+++++++..+.    +..+++.+|..
T Consensus       212 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence            99999999999997643    44677777644

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.89  E-value=2.1e-22  Score=166.31  Aligned_cols=217  Identities=13%  Similarity=0.046  Sum_probs=152.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchh-hhc-CCCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR-KWI-GHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~Dl~~~~~------------   95 (297)
                      ..+++++||||+|+||+++++.|+++| ++|+++++......+... ... ...++.++.+|+++...            
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAG-MAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTT-CEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999 999998854322221111 111 12468899999998631            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++||+||......    ..+++...+++|+.++..+++++..    .+. ++|++||...+.              
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------  167 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR--------------  167 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--------------
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc--------------
Confidence            26999999999765433    2344667889999999998888743    454 899999987652              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.....    ....    .....    ........
T Consensus       168 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~----~~~~----~~~~~----~~~~~~~~  233 (269)
T 3gk3_A          168 --GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV----PQDV----LEAKI----LPQIPVGR  233 (269)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------------CCS----GGGCTTSS
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh----chhH----HHHHh----hhcCCcCC
Confidence              2334467999999999999988876   379999999999988753221    1111    11000    11111234


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      +..++|+|+++++++....    +..+++.+|..++
T Consensus       234 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          234 LGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             CBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             ccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence            6789999999999998654    4478888876543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.89  E-value=4.4e-22  Score=165.73  Aligned_cols=214  Identities=13%  Similarity=0.006  Sum_probs=149.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~   95 (297)
                      ...+|+|+||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..++.++.+|+++..            .
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSV-SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTS-SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            3457899999999999999999999999 9999988754322211111111 246888999999862            1


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|+|||+||......    ..+++...+++|+.++.++++++.    +.+. ++|++||...+..             
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------------  186 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG-------------  186 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-------------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-------------
Confidence            36999999999764322    234466788999999887777764    4565 8999999876531             


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                         ..+...|+.+|.+.+.+.+.++.+.   ++++++++|+.+.++......    ...........+.         ..
T Consensus       187 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~---------~~  250 (285)
T 2c07_A          187 ---NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS----EQIKKNIISNIPA---------GR  250 (285)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC----HHHHHHHHTTCTT---------SS
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC----HHHHHHHHhhCCC---------CC
Confidence               2234679999999999999888663   799999999999887532211    1222222222211         13


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      +++++|+|++++.++..+.    +..+++.+|.
T Consensus       251 ~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          251 MGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            7899999999999997643    4467777763

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.89  E-value=6.4e-22  Score=162.27  Aligned_cols=217  Identities=14%  Similarity=0.090  Sum_probs=152.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc-hhhhc-CCCceEEEecccCCcc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-LRKWI-GHPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~-----------   94 (297)
                      ...++++|+||||+|+||+++++.|+++| ++|+++++......+. ..... ...++.++++|+++..           
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDG-FRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTT-EEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            34567999999999999999999999999 9999888543333222 22211 1246888999999862           


Q ss_pred             -cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       ..++|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.            
T Consensus        88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------  155 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK------------  155 (256)
T ss_dssp             HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG------------
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc------------
Confidence             226999999999765432    23456678999999988887766    45565 899999987652            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                          +..+...|+.+|.+.+.+.+.++.+   .++++..++||.+.++.....    .+.....+....++         
T Consensus       156 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~---------  218 (256)
T 3ezl_A          156 ----GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI----RPDVLEKIVATIPV---------  218 (256)
T ss_dssp             ----SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS----CHHHHHHHHHHSTT---------
T ss_pred             ----CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc----CHHHHHHHHhcCCC---------
Confidence                3334567999999999999988876   479999999999987642211    12233333332221         


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      ..+.+++|+|+++++++....    +..+++.+|..+
T Consensus       219 ~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          219 RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence            236689999999999986543    447888776543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.89  E-value=2.9e-22  Score=164.64  Aligned_cols=217  Identities=9%  Similarity=-0.017  Sum_probs=148.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCccc----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~----------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.   ...++.++.+|+++...          
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNG-ARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 999999996432222111111   01268889999998621          


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       .++|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.             
T Consensus        83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  149 (260)
T 2z1n_A           83 LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR-------------  149 (260)
T ss_dssp             TTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------
T ss_pred             hcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC-------------
Confidence             14999999999754322    23446678899999997666665    45566 899999988753             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCCh------hHHHHH-HHHHHcCCCeEEe
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG------RVVSNF-IAQAIRGEPLTVQ  235 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~------~~~~~~-~~~~~~~~~~~~~  235 (297)
                         +..+...|+.+|.+.+.+.+.++.+.   ++++++++|+.++++.......      ...... ...+...      
T Consensus       150 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  220 (260)
T 2z1n_A          150 ---PWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASR------  220 (260)
T ss_dssp             ---CCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------C------
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhc------
Confidence               22334679999999999999888764   7999999999999886421000      000000 0001010      


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                         .....+.+++|+|+++++++..+.    +..+++.+|
T Consensus       221 ---~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          221 ---IPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             ---CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence               111247799999999999997643    446777765

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.89  E-value=6.3e-22  Score=163.12  Aligned_cols=217  Identities=14%  Similarity=0.038  Sum_probs=155.0

Q ss_pred             cCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||+  |+||+++++.|+++| ++|++++|+. ...+....+.. .....++++|+++..            
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G-~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREG-AELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTT-CEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCC-CEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            356899999999  999999999999999 9999999975 22222222211 123478899999862            


Q ss_pred             cCCcCEEEEccCCCCC----c-----ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASP----I-----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~----~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                      ..++|++||+||....    .     ...+++...+++|+.++..+++++.+.   +.++|++||...+.          
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------  154 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----------  154 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----------
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc----------
Confidence            1268999999997642    1     223456678999999999999999775   23899999977642          


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                            +......|+.+|.+.+.+.+.++.+.   +++++.++||.++++......  ........+....++       
T Consensus       155 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~p~-------  219 (265)
T 1qsg_A          155 ------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK--DFRKMLAHCEAVTPI-------  219 (265)
T ss_dssp             ------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST--THHHHHHHHHHHSTT-------
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc--ccHHHHHHHHhcCCC-------
Confidence                  22334679999999999999988774   799999999999988632211  112222322222221       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                        ..+.+++|+|+++++++....    +..+++.+|..++
T Consensus       220 --~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          220 --RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             --SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             --CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence              136789999999999987543    3468888875544

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.89  E-value=1.2e-22  Score=165.45  Aligned_cols=210  Identities=10%  Similarity=0.034  Sum_probs=144.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCCCccchhhhc-CCCceEE-EecccCCcc------------cC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWI-GHPRFEL-IRHDVTEPL------------LI   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~-~~~~~~~-~~~Dl~~~~------------~~   96 (297)
                      +|+|+||||+|+||+++++.|+++| ++|+++ +|+.....+....+. ....+.. +.+|+++..            ..
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G-~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDG-FALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTT-CEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999 999988 675322211111111 1234556 889998862            23


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHH----HHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNML----GLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~----~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||+||......    ..+++...+++|+.++..++    ..+++.+. ++|++||...+..              
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  145 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILG--------------  145 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccC--------------
Confidence            6999999999765322    23446678899999955554    45556676 8999999865421              


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                        ..+...|+.+|.+.+.+.+.++.+.   +++++++||+.++++.....    ............+.         ..+
T Consensus       146 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~~---------~~~  210 (245)
T 2ph3_A          146 --NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL----PQEVKEAYLKQIPA---------GRF  210 (245)
T ss_dssp             --CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS----CHHHHHHHHHTCTT---------CSC
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc----CHHHHHHHHhcCCC---------CCC
Confidence              1234679999999999999888764   79999999999988642211    11222222222211         247


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      ++++|+|++++.++..+.    +..|++.+|
T Consensus       211 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  241 (245)
T 2ph3_A          211 GRPEEVAEAVAFLVSEKAGYITGQTLCVDGG  241 (245)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            899999999999997642    446777765

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.89  E-value=2e-21  Score=159.92  Aligned_cols=200  Identities=12%  Similarity=0.078  Sum_probs=145.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      .++|+++||||+|+||+++++.|+++| ++|++++|+..    .+... ....+.++++|+++...            .+
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~----~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEG-HPLLLLARRVE----RLKAL-NLPNTLCAQVDVTDKYTFDTAITRAEKIYGP   87 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCHH----HHHTT-CCTTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHH----HHHHh-hcCCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            457899999999999999999999999 99999998532    22222 23478899999998621            26


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.                
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----------------  151 (266)
T 3p19_A           88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK----------------  151 (266)
T ss_dssp             EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC----------------
Confidence            999999999765433    23345667899999999977766    34555 899999987652                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++...................           ....++
T Consensus       152 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----------~~~r~~  220 (266)
T 3p19_A          152 TFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRV-----------DMGGVL  220 (266)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHH-----------HTTCCB
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcc-----------cccCCC
Confidence            3334467999999999999988876   47999999999999876432211111111111100           011368


Q ss_pred             eHHHHHHHHHHHHhcCC
Q 022414          246 YVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~  262 (297)
                      +++|+|++++++++.+.
T Consensus       221 ~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          221 AADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             CHHHHHHHHHHHHHSCT
T ss_pred             CHHHHHHHHHHHHcCCC
Confidence            89999999999999886

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.88  E-value=7.8e-22  Score=161.63  Aligned_cols=212  Identities=12%  Similarity=-0.012  Sum_probs=149.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------CC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      .+|+++||||+|+||+++++.|+++| ++|++++|+..  .+....+.. ..++.++.+|+++...            .+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAG-ANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999 99999998654  221122211 2357888999988621            26


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.                
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  143 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV----------------  143 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc----------------
Confidence            999999999764322    23445678899999776666555    56666 899999987653                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH---HHH---H----HHHHcCCCeEEe
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV---SNF---I----AQAIRGEPLTVQ  235 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~---~~~---~----~~~~~~~~~~~~  235 (297)
                      +......|+.+|.+.+.+.+.++.+   .++++++++|+.++++..    ....   ...   .    ..+...      
T Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~------  213 (255)
T 2q2v_A          144 GSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLV----QKQIDDRAANGGDPLQAQHDLLAE------  213 (255)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHH----HHHHHHHHHHTCCHHHHHHHHHTT------
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcch----hhhcccccccccchHHHHHHHHhc------
Confidence            2223467999999999999998876   379999999999988642    1111   111   0    111011      


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                        ......+++++|+|+++++++..+.    +..+++.+|..
T Consensus       214 --~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          214 --KQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             --TCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             --cCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence              1112358899999999999987643    44678877643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.88  E-value=2.9e-22  Score=165.43  Aligned_cols=217  Identities=15%  Similarity=0.065  Sum_probs=156.4

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ...++.++++|+++...           
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAG-ARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 999999986533222222221 12468889999998621           


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       .++|++|||||......    ..+++...+++|+.++..+++++.+    .+. ++|++||...+.             
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~-------------  167 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL-------------  167 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC-------------
Confidence             26999999999765432    3345667899999999999777644    455 899999977542             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH--HHHHHHHHcCCCeEEecCCce
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  240 (297)
                         +..+...|+.+|.+.+.+.+.++.+   .+++++.++||.+.++..    ....  +.....+....++        
T Consensus       168 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~----~~~~~~~~~~~~~~~~~p~--------  232 (271)
T 4ibo_A          168 ---ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMN----QALIDNPEFDAWVKARTPA--------  232 (271)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG----HHHHHCHHHHHHHHHHSTT--------
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcch----hhcccCHHHHHHHHhcCCC--------
Confidence               3334567999999999999998876   479999999999988752    1111  1222223332222        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                       ..+..++|+|+++++++....    +..+++.+|...
T Consensus       233 -~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          233 -KRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             -CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -CCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeec
Confidence             236789999999999987643    447888887544

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.88  E-value=1e-21  Score=160.31  Aligned_cols=213  Identities=16%  Similarity=0.134  Sum_probs=145.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC-CCCccchhhhcCCCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+. ....+.+.. . ..++.++++|+++..            ..
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEG-ADIAIADLVPAPEAEAAIRN-L-GRRVLTVKCDVSQPGDVEAFGKQVISTFG   81 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCHHHHHHHHH-T-TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEcCCchhHHHHHHHh-c-CCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999 9999999965 221111211 1 246888999999862            23


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHH----HHHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||......    ..+++...+++|+.++..++++    +++.+. ++|++||...+.               
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  146 (249)
T 2ew8_A           82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL---------------  146 (249)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS---------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc---------------
Confidence            6999999999764322    2344667889999998888777    455665 899999988763               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +..+...|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++....   ...... ....... .      .....+
T Consensus       147 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~-~~~~~~~-~------~~~~~~  214 (249)
T 2ew8_A          147 -KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA---SALSAM-FDVLPNM-L------QAIPRL  214 (249)
T ss_dssp             -CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CT-T------SSSCSC
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh---ccccch-hhHHHHh-h------CccCCC
Confidence             2233467999999999999998876   37999999999998875210   000000 0001100 0      011247


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      .+++|+|+++++++....    +..+++.+|.
T Consensus       215 ~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          215 QVPLDLTGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             CCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence            899999999999997542    4467777653

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.88  E-value=2.1e-22  Score=168.53  Aligned_cols=231  Identities=13%  Similarity=0.053  Sum_probs=158.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CC---ceEEEecccCCccc----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HP---RFELIRHDVTEPLL----------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~Dl~~~~~----------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..   ++.++.+|+++...          
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEG-AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            567999999999999999999999999 9999999964322221111111 12   68889999998621          


Q ss_pred             --CCcCEEEEccCCCCCcc------cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCC
Q 022414           96 --IEVDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 --~~~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                        .++|++|||||......      ..+++...+++|+.++..+++++.+    .+.++|++||...+...         
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~---------  173 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA---------  173 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC---------
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCC---------
Confidence              26999999999754322      2344667889999999999888754    33589999998765311         


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC--ChhH---HHHHHHHHHcCCCeEEe
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID--DGRV---VSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~--~~~~---~~~~~~~~~~~~~~~~~  235 (297)
                            ......|+.+|.+.+.+.+.++.+   .++++++++||.+.++.....  ....   ............+    
T Consensus       174 ------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p----  243 (297)
T 1xhl_A          174 ------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP----  243 (297)
T ss_dssp             ------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT----
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCC----
Confidence                  023467999999999999888765   589999999999988642110  0000   0111111111111    


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcC---C--CccEEecCCCcccHHHHHHHHHH
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGE---N--TGPINIGNPGEFTMLELAENVKE  285 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~---~--~~~~~i~~~~~~s~~e~~~~i~~  285 (297)
                           ...+..++|+|+++++++..+   .  +..+++.+|..+.+.+.+..+.+
T Consensus       244 -----~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  293 (297)
T 1xhl_A          244 -----VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS  293 (297)
T ss_dssp             -----TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred             -----CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence                 124789999999999999754   2  45788888777666665444444

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.88  E-value=2.8e-21  Score=159.41  Aligned_cols=205  Identities=13%  Similarity=0.037  Sum_probs=150.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCC--CeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~----------   95 (297)
                      ...+|+|+||||+|+||+++++.|+++|.  ++|++++|+..... .+..+.. ..++.++.+|+++...          
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH-HHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence            34578999999999999999999999985  78999999754432 2222211 2478899999998632          


Q ss_pred             --C--CcCEEEEccCCCC-Cc----ccccChhhhHHHhHHHHHHHHHHHHHc----------------CCeEEEEeccee
Q 022414           96 --I--EVDQIYHLACPAS-PI----FYKYNPVKTIKTNVIGTLNMLGLAKRV----------------GARILLTSTSEV  150 (297)
Q Consensus        96 --~--~~d~vi~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----------------~~r~v~~Ss~~~  150 (297)
                        .  ++|+|||+||... ..    ...++....+++|+.++..+++++.+.                +.++|++||...
T Consensus        97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  176 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  176 (267)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence              1  6999999999765 21    123446678899999999999888543                348999999887


Q ss_pred             ecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHH
Q 022414          151 YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAI  227 (297)
Q Consensus       151 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~  227 (297)
                      +...             .+..+...|+.+|.+.+.+.+.++.+   .++++++++|+.+..+....              
T Consensus       177 ~~~~-------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------  229 (267)
T 1sny_A          177 SIQG-------------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--------------  229 (267)
T ss_dssp             CSTT-------------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------------
T ss_pred             cccC-------------CCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------------
Confidence            5321             11224467999999999999988876   58999999999987754210              


Q ss_pred             cCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---CccEEecCCCccc
Q 022414          228 RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNPGEFT  275 (297)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s  275 (297)
                                    ..+...+|+|+.++.++....   +|.|...+|..+.
T Consensus       230 --------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  266 (267)
T 1sny_A          230 --------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPLA  266 (267)
T ss_dssp             --------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBCC
T ss_pred             --------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCcC
Confidence                          024678999999999998754   6666655555544

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.88  E-value=8.4e-22  Score=158.18  Aligned_cols=200  Identities=14%  Similarity=0.055  Sum_probs=148.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~v  101 (297)
                      ..+|+++||||+|+||+++++.|.++| ++|++++|+..                   +|+++..        ..++|++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~-------------------~D~~~~~~v~~~~~~~g~id~l   63 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEH-TIVHVASRQTG-------------------LDISDEKSVYHYFETIGAFDHL   63 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTT-EEEEEESGGGT-------------------CCTTCHHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEecCCcc-------------------cCCCCHHHHHHHHHHhCCCCEE
Confidence            457899999999999999999999999 99999998542                   5665542        2369999


Q ss_pred             EEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCCCCCCCCCCCC
Q 022414          102 YHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (297)
Q Consensus       102 i~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  173 (297)
                      |||||.....     ...+++...+++|+.++..+++++.+.-   .++|++||...+.                +..+.
T Consensus        64 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------~~~~~  127 (223)
T 3uce_A           64 IVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK----------------VVANT  127 (223)
T ss_dssp             EECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS----------------CCTTC
T ss_pred             EECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc----------------CCCCc
Confidence            9999976321     1234466788999999999999997652   3799999987652                33345


Q ss_pred             ChHHHhHHHHHHHHHHHHHHhC-CcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHH
Q 022414          174 SCYDEGKRVAETLMFDYHRQHG-IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (297)
Q Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~~-~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  252 (297)
                      ..|+.+|.+.+.+.+.++.+.. ++++.++||.+.++............+........+.         ..+.+++|+|+
T Consensus       128 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~  198 (223)
T 3uce_A          128 YVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIAM  198 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHHH
Confidence            6799999999999999988865 9999999999998754332222233333333333222         24678999999


Q ss_pred             HHHHHHhcCC--CccEEecCCCcc
Q 022414          253 GLIRLMEGEN--TGPINIGNPGEF  274 (297)
Q Consensus       253 ~~~~~~~~~~--~~~~~i~~~~~~  274 (297)
                      +++++++...  +..+++.+|..+
T Consensus       199 ~~~~l~~~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          199 AYLFAIQNSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             HHHHHHHCTTCCSCEEEESTTGGG
T ss_pred             HHHHHccCCCCCCcEEEecCCeec
Confidence            9999998655  447788877544

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.88  E-value=5.4e-22  Score=164.53  Aligned_cols=211  Identities=15%  Similarity=0.100  Sum_probs=150.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec-CCCCCccchhhhcC--CCceEEEecccCCc----cc--------
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN-YFTGSKDNLRKWIG--HPRFELIRHDVTEP----LL--------   95 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~----~~--------   95 (297)
                      .+|+++||||+|+||+++++.|+++| ++|++++| +.....+....+..  ...+.++.+|+++.    ..        
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQG-FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            46899999999999999999999999 99999998 43221111111110  24688899999987    32        


Q ss_pred             ----CCcCEEEEccCCCCCccc----c-----------cChhhhHHHhHHHHHHHHHHHHHc---C-------CeEEEEe
Q 022414           96 ----IEVDQIYHLACPASPIFY----K-----------YNPVKTIKTNVIGTLNMLGLAKRV---G-------ARILLTS  146 (297)
Q Consensus        96 ----~~~d~vi~~a~~~~~~~~----~-----------~~~~~~~~~n~~~~~~l~~~~~~~---~-------~r~v~~S  146 (297)
                          .++|++|||||.......    .           +++...+++|+.++..+++++.+.   +       .++|++|
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is  168 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC  168 (276)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence                169999999997543221    1           445678899999999999998763   2       4799999


Q ss_pred             cceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHH
Q 022414          147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFI  223 (297)
Q Consensus       147 s~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~  223 (297)
                      |...+.                +......|+.+|.+.+.+.+.++.+.   +++++.++||.++++ ... .    ....
T Consensus       169 S~~~~~----------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~-~----~~~~  226 (276)
T 1mxh_A          169 DAMTDL----------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAM-P----QETQ  226 (276)
T ss_dssp             CGGGGS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSS-C----HHHH
T ss_pred             chhhcC----------------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccC-C----HHHH
Confidence            987752                22334679999999999999888764   899999999999998 211 1    1222


Q ss_pred             HHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          224 AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      ..+....++     +   +++.+++|+|+++++++....    +..+++.+|.
T Consensus       227 ~~~~~~~p~-----~---r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          227 EEYRRKVPL-----G---QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             HHHHTTCTT-----T---SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhcCCC-----C---CCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence            222222211     1   127899999999999997543    3467777764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.88  E-value=2.1e-21  Score=160.19  Aligned_cols=211  Identities=17%  Similarity=0.083  Sum_probs=152.1

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------   95 (297)
                      ....+|+|+||||+|+||+++++.|+++| ++|++++|+....         ......+++|+++...            
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYG-AKVVSVSLDEKSD---------VNVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCC--C---------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCchhc---------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            44568999999999999999999999999 9999999864332         1246678899998621            


Q ss_pred             CCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||.......    .+++...+++|+.++..+++++.+    .+. ++|++||...+.              
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------  145 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA--------------  145 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc--------------
Confidence            269999999997654332    233556788999999998888644    455 899999988763              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCC-------CChhHHHHHHHHHHcCCCeEEecC
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNI-------DDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                        +......|+.+|.+.+.+.+.++.+.  +++++.++||.+.++....       ............+....++     
T Consensus       146 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-----  218 (269)
T 3vtz_A          146 --ATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM-----  218 (269)
T ss_dssp             --BCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTT-----
T ss_pred             --CCCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCC-----
Confidence              23334679999999999999998876  7999999999998764100       0000112222222222221     


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                          ..+.+++|+|+++++++....    +..+++.+|..
T Consensus       219 ----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          219 ----GRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ----CCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence                246789999999999998653    44788887644

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.88  E-value=2.6e-22  Score=165.61  Aligned_cols=216  Identities=12%  Similarity=0.007  Sum_probs=154.8

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ....+..+.+|+++..            .
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRG-AMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999 999999996433222111111 1236788899999862            1


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||......    ..++++..+++|+.++..+++++.    +.+. ++|++||...+.              
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------  169 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA--------------  169 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC--------------
Confidence            26999999999765432    334566788999999999998874    3344 899999987652              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++....    +............++         ..
T Consensus       170 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~~p~---------~r  234 (270)
T 3ftp_A          170 --GNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG----LPQEQQTALKTQIPL---------GR  234 (270)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH----SCHHHHHHHHTTCTT---------CS
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh----cCHHHHHHHHhcCCC---------CC
Confidence              2334467999999999999988876   47999999999998753211    111222222222221         24


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      +.+++|+|+++++++....    +..+++.+|..+
T Consensus       235 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          235 LGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence            7799999999999996543    457888887554

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.88  E-value=4.9e-22  Score=161.77  Aligned_cols=210  Identities=14%  Similarity=0.020  Sum_probs=147.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCCCccchhhhcC--CCceEEEecccCCccc------------C
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~------------~   96 (297)
                      +|+|+||||+|+||+++++.|+++| ++|+++ .|+..... .+.+.+.  ..++.++.+|+++...            .
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G-~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAG-CKVLVNYARSAKAAE-EVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHH-HHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHH-HHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999 999885 66532211 1111111  2367889999998621            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||+||......    ..+++...+++|+.++.++++++.+    .+. ++|++||...+.               
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------  143 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI---------------  143 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH---------------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC---------------
Confidence            6999999999765322    2344667889999999999888855    355 899999986542               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +..+...|+.+|.+.+.+.+.++.+   .++++++++|+.++++....    +............+.         ..+
T Consensus       144 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~---------~~~  209 (244)
T 1edo_A          144 -GNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK----LGEDMEKKILGTIPL---------GRT  209 (244)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT----TCHHHHHHHHTSCTT---------CSC
T ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh----cChHHHHHHhhcCCC---------CCC
Confidence             1123467999999999999888766   47999999999998864211    111222222222211         247


Q ss_pred             eeHHHHHHHHHHHHhcCC-----CccEEecCCC
Q 022414          245 CYVSDMVDGLIRLMEGEN-----TGPINIGNPG  272 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~-----~~~~~i~~~~  272 (297)
                      ++++|+|++++.++..+.     +..+++.+|.
T Consensus       210 ~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          210 GQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             BCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             CCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            899999999999984432     4467887763

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.88  E-value=7.6e-22  Score=164.78  Aligned_cols=218  Identities=12%  Similarity=-0.027  Sum_probs=153.2

Q ss_pred             cccCCCEEEEEcCCch--hHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc----------
Q 022414           28 FFQSNMRILVTGGAGF--IGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL----------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~--iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~----------   94 (297)
                      ....+|+++||||+|+  ||+++++.|+++| ++|++++|+... .+....... ...+.++++|+++..          
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAG-AELAFTYQGDAL-KKRVEPLAEELGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTT-CEEEEEECSHHH-HHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCC-CEEEEEcCCHHH-HHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            3456899999999988  9999999999999 999999986321 111111111 135788999999862          


Q ss_pred             --cCCcCEEEEccCCCCC--------cccccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASP--------IFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                        ..++|++|||||....        ....+++...+++|+.++..+++++.+.-   .++|++||...+.         
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~---------  175 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK---------  175 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS---------
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc---------
Confidence              1369999999997642        11334566789999999999999987642   3899999987652         


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                             +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.......  ............++      
T Consensus       176 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~------  240 (293)
T 3grk_A          176 -------VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD--FRYILKWNEYNAPL------  240 (293)
T ss_dssp             -------BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC--HHHHHHHHHHHSTT------
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc--hHHHHHHHHhcCCC------
Confidence                   2334467999999999999998876   47999999999998875322111  11222222222221      


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                         ..+..++|+|+++++++....    +..+++.+|..+
T Consensus       241 ---~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          241 ---RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             ---SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ---CCCCCHHHHHHHHHHHcCccccCCcceEEEECCCccc
Confidence               135688999999999998643    446788877554

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.88  E-value=3.1e-21  Score=157.40  Aligned_cols=206  Identities=16%  Similarity=0.127  Sum_probs=145.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIY  102 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi  102 (297)
                      ...+|+|+||||+|+||+++++.|+++| ++|++++|+.    +.....   ..+.++ +|+.+.      ...++|++|
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~----~~~~~~---~~~~~~-~D~~~~~~~~~~~~~~iD~lv   86 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEG-AEVTICARNE----ELLKRS---GHRYVV-CDLRKDLDLLFEKVKEVDILV   86 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCH----HHHHHT---CSEEEE-CCTTTCHHHHHHHSCCCSEEE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCH----HHHHhh---CCeEEE-eeHHHHHHHHHHHhcCCCEEE
Confidence            3457999999999999999999999999 9999999964    222222   246666 888322      122799999


Q ss_pred             EccCCCCCcc----cccChhhhHHHhHHHHHHHHH----HHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCC
Q 022414          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLG----LAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (297)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  173 (297)
                      |+||......    ..+++...+++|+.++..+.+    .+++.+. ++|++||...+.                +..+.
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~~~  150 (249)
T 1o5i_A           87 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS----------------PIENL  150 (249)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------CCTTB
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC----------------CCCCC
Confidence            9999765432    234456778899988766654    4456676 899999988763                22334


Q ss_pred             ChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHH-HHHcCCCeEEecCCceeEeeeeHHH
Q 022414          174 SCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIA-QAIRGEPLTVQAPGTQTRSFCYVSD  249 (297)
Q Consensus       174 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D  249 (297)
                      ..|+.+|.+.+.+.+.++.+   .+++++.++|+.++++...    ........ .+....++         ..+++++|
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~p~---------~~~~~~~d  217 (249)
T 1o5i_A          151 YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK----ELLSEEKKKQVESQIPM---------RRMAKPEE  217 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH----HHSCHHHHHHHHTTSTT---------SSCBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc----ccchhhHHHHHHhcCCC---------CCCcCHHH
Confidence            67999999999999888876   4799999999999987521    11111111 22222211         24789999


Q ss_pred             HHHHHHHHHhcCC----CccEEecCCC
Q 022414          250 MVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       250 va~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      +|+++++++....    +..+++.+|.
T Consensus       218 vA~~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          218 IASVVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHcCccccCCCCCEEEECCCc
Confidence            9999999987643    4467777764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.88  E-value=1.5e-21  Score=163.10  Aligned_cols=222  Identities=11%  Similarity=0.013  Sum_probs=152.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~v  101 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+  ..++.++++|+++..        ..++|++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l   90 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRG-ATVIMAVRDTRKGEAAARTM--AGQVEVRELDLQDLSSVRRFADGVSGADVL   90 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHTTS--SSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh--cCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            467999999999999999999999999 99999999653322222221  247889999999862        2368999


Q ss_pred             EEccCCCCCc--ccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHH
Q 022414          102 YHLACPASPI--FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE  178 (297)
Q Consensus       102 i~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~  178 (297)
                      ||+||...+.  ...++++..+++|+.++..+++++.+... |+|++||...+......   ++......+..+...|+.
T Consensus        91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~---~~~~~~~~~~~~~~~Y~~  167 (291)
T 3rd5_A           91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINL---EDLNWRSRRYSPWLAYSQ  167 (291)
T ss_dssp             EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCS---SCTTCSSSCCCHHHHHHH
T ss_pred             EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCc---ccccccccCCCCcchHHH
Confidence            9999976532  24566788999999999999999988776 89999998876432111   000001134455678999


Q ss_pred             hHHHHHHHHHHHHHHh---C--CcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHH
Q 022414          179 GKRVAETLMFDYHRQH---G--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       179 sK~~~e~~~~~~~~~~---~--~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                      +|.+.+.+.+.++.+.   +  ++++.++||.+..+.....    .......... .        ...+-..+++|+|++
T Consensus       168 sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~----~~~~~~~~~~-~--------~~~~~~~~~~~~A~~  234 (291)
T 3rd5_A          168 SKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS----GRKLGDALMS-A--------ATRVVATDADFGARQ  234 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------------------CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc----chHHHHHHHH-H--------HHHHHhCCHHHHHHH
Confidence            9999999998887663   4  9999999999987753211    1111111110 0        011223459999999


Q ss_pred             HHHHHhcCC-CccE-EecC
Q 022414          254 LIRLMEGEN-TGPI-NIGN  270 (297)
Q Consensus       254 ~~~~~~~~~-~~~~-~i~~  270 (297)
                      +++++..+. +|.| .+.+
T Consensus       235 ~~~l~~~~~~~G~~~~vdg  253 (291)
T 3rd5_A          235 TLYAASQDLPGDSFVGPRF  253 (291)
T ss_dssp             HHHHHHSCCCTTCEEEETT
T ss_pred             HHHHHcCCCCCCceeCCcc
Confidence            999998865 5544 4443

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.88  E-value=3.6e-22  Score=165.07  Aligned_cols=215  Identities=9%  Similarity=0.006  Sum_probs=152.2

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~----------   95 (297)
                      +...+|+|+||||+|+||+++++.|+++| ++|++++|+.....+.+...+.  ..++.++++|+++...          
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMG-LKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999 9999999964333333322221  2468899999998621          


Q ss_pred             --CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           96 --IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                        .++|++||+||......    ..+++...+++|+.++..+++++.    +.+. ++|++||...+.            
T Consensus       104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------  171 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER------------  171 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------------
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC------------
Confidence              26999999999765432    234566788999999988887774    3455 899999987652            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                          +..+...|+.+|.+.+.+.+.++.+   .++++..++||.+.++....    .........         ......
T Consensus       172 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~~~~~~~~~---------~~~~~~  234 (271)
T 4iin_A          172 ----GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN----LKDELKADY---------VKNIPL  234 (271)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------C---------GGGCTT
T ss_pred             ----CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh----hcHHHHHHH---------HhcCCc
Confidence                3334567999999999999988876   47999999999998764211    111111111         111122


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      ..+.+++|+|+++++++....    +..+++.+|-
T Consensus       235 ~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          235 NRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            357899999999999998653    4467777753

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.88  E-value=1e-21  Score=160.06  Aligned_cols=212  Identities=16%  Similarity=0.063  Sum_probs=148.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc------------C
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      .+|+++||||+|+||+++++.|+++| ++|++++|......+.....+  ...++.++++|+++...            .
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQG-ANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999 999999883222111111111  12468889999998631            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.               
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  146 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT---------------  146 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC---------------
Confidence            6999999999765322    23446678899999977776665    44565 899999987642               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++..........    .......+.         ..+
T Consensus       147 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~p~---------~~~  212 (246)
T 2uvd_A          147 -GNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIK----AEMLKLIPA---------AQF  212 (246)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHH----HHHHHTCTT---------CSC
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHH----HHHHhcCCC---------CCC
Confidence             1123467999999999998888765   47999999999998875322111111    112222111         237


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      ++++|+|+++++++..+.    +..+++.+|.
T Consensus       213 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          213 GEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             cCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            899999999999997642    4467777653

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.88  E-value=2e-22  Score=164.77  Aligned_cols=215  Identities=14%  Similarity=0.048  Sum_probs=148.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+|+||||+|+||+++++.|+++| ++|++++|+.....+.........++.++.+|+++...            .+
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEG-AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999 99999999643222211111112478899999998631            25


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC--eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA--RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +|+|||+||......    ..+++...+++|+.++..+.+++    ++.+.  ++|++||...+.               
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------  147 (251)
T 1zk4_A           83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV---------------  147 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS---------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc---------------
Confidence            999999999764322    22345678899999877666554    44554  799999987653               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                       +..+...|+.+|.+.+.+.+.++.+     .+++++++||+.++++.......    ....... ....       ...
T Consensus       148 -~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~----~~~~~~~-~~~~-------~~~  214 (251)
T 1zk4_A          148 -GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG----AEEAMSQ-RTKT-------PMG  214 (251)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT----HHHHHTS-TTTC-------TTS
T ss_pred             -CCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCc----hhhhHHH-hhcC-------CCC
Confidence             2233467999999999999887653     47999999999999874221100    1111101 1111       112


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      .+++++|+|+++++++..+.    +..+++.+|..
T Consensus       215 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          215 HIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence            47899999999999997642    44678877643

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.88  E-value=6.1e-22  Score=165.91  Aligned_cols=221  Identities=16%  Similarity=0.072  Sum_probs=154.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC--------ccchhhh---c--CCCceEEEecccCCccc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--------KDNLRKW---I--GHPRFELIRHDVTEPLL   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--------~~~~~~~---~--~~~~~~~~~~Dl~~~~~   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+....        .+.+...   +  ...++.++++|+++...
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREG-ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            3568999999999999999999999999 9999999873211        1211111   1  12468899999998621


Q ss_pred             ------------CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc----C-C-eEEEEecceeec
Q 022414           96 ------------IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV----G-A-RILLTSTSEVYG  152 (297)
Q Consensus        96 ------------~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~-r~v~~Ss~~~~~  152 (297)
                                  .++|++|||||......     ..+++...+++|+.++..+++++...    + . ++|++||...+.
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~  183 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR  183 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence                        26999999999765432     33456778999999999999887442    3 3 899999987652


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCCh----------hHH
Q 022414          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG----------RVV  219 (297)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~----------~~~  219 (297)
                                      +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++.......          ...
T Consensus       184 ----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  247 (299)
T 3t7c_A          184 ----------------GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTV  247 (299)
T ss_dssp             ----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCH
T ss_pred             ----------------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchh
Confidence                            33344679999999999999988774   7999999999999886421100          000


Q ss_pred             HHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          220 SNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      .............       . ..+..++|+|+++++++....    +..+++.+|..+
T Consensus       248 ~~~~~~~~~~~~~-------p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          248 EDFQVASRQMHVL-------P-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             HHHHHHHHHHSSS-------S-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hHHHHHhhhhccc-------C-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            0000000000100       0 247789999999999997653    447888877543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.88  E-value=3.4e-21  Score=156.30  Aligned_cols=205  Identities=13%  Similarity=0.090  Sum_probs=147.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----------cCCcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----------LIEVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----------~~~~d~  100 (297)
                      +|+++||||+|+||+++++.|+++| ++|++++|+...    ..+.+   ++..+.+|+++..           ..++|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G-~~V~~~~r~~~~----~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARG-YRVAIASRNPEE----AAQSL---GAVPLPTDLEKDDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCHH----HHHHH---TCEEEECCTTTSCHHHHHHHHHHHHTSCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHH----HHHhh---CcEEEecCCchHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999 999999996432    22222   2778899998731           126999


Q ss_pred             EEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      +||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+...              ...
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------~~~  139 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG--------------GPV  139 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------------TTS
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC--------------CCC
Confidence            999999754322    23456678899999998888887    34566 89999998876321              113


Q ss_pred             CCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHH--HHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      +...|+.+|.+.+.+.+.++.+.   ++++++++|+.+.++...    ...  +.....+....++         ..+.+
T Consensus       140 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~p~---------~~~~~  206 (239)
T 2ekp_A          140 PIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL----PLRQNPELYEPITARIPM---------GRWAR  206 (239)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH----HHHTCHHHHHHHHTTCTT---------SSCBC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh----ccccCHHHHHHHHhcCCC---------CCCcC
Confidence            44679999999999999888764   899999999999887521    111  1222222222211         13679


Q ss_pred             HHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          247 VSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ++|+|+++++++..+.   .| .+++.+|
T Consensus       207 ~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          207 PEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence            9999999999987542   34 5667665

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.88  E-value=1.2e-21  Score=159.49  Aligned_cols=192  Identities=14%  Similarity=0.061  Sum_probs=143.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCC-------eEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc---------
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKN-------EVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL---------   94 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~-------~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~---------   94 (297)
                      +|+|+||||+|+||+++++.|+++| +       +|++++|+..........+.. ..++.++.+|+++..         
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G-~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAA-RHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHT-TTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhc-CcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            5789999999999999999999999 7       899999864322111111111 246888999999862         


Q ss_pred             ---cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCC
Q 022414           95 ---LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 ---~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                         ..++|+|||+||......    ..+++...+++|+.++..+++++.    +.+. ++|++||...+.          
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------  150 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK----------  150 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC----------
Confidence               126999999999764322    234566788999999999988874    3455 899999988753          


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                            +..+...|+.+|.+.+.+.+.++.+   .+++++++||+.++++.......             ..        
T Consensus       151 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------------~~--------  203 (244)
T 2bd0_A          151 ------AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-------------EM--------  203 (244)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-------------TT--------
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-------------cc--------
Confidence                  2334467999999999999887764   47999999999999986322100             00        


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                       ...+++++|+|++++.++..+.
T Consensus       204 -~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          204 -QALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             -GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             -cccCCCHHHHHHHHHHHHhCCc
Confidence             1157899999999999998765

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.88  E-value=5.4e-21  Score=155.65  Aligned_cols=209  Identities=16%  Similarity=0.097  Sum_probs=148.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+...    +.......++.++.+|+++...            .+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEG-ARLVACDIEEGP----LREAAEAVGAHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHH----HHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHH----HHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 999999985422    2221111137888999998631            25


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++|||||......    ..++++..+++|+.++..+++++.+    .+. ++|++||...++                
T Consensus        78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------------  141 (245)
T 1uls_A           78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG----------------  141 (245)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcC----------------
Confidence            899999999764322    2334567889999999999888855    345 899999987322                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                       ......|..+|...+.+.+.++.+   .+++++.++||.+.++.......    ..........+.         ..++
T Consensus       142 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~p~---------~~~~  207 (245)
T 1uls_A          142 -NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE----KVREKAIAATPL---------GRAG  207 (245)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH----HHHHHHHHTCTT---------CSCB
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCH----HHHHHHHhhCCC---------CCCc
Confidence             122357999999999999888765   47999999999998875322111    112222222211         1367


Q ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      +++|+|+++++++..+.    +..+.+.+|..
T Consensus       208 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          208 KPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            99999999999997643    44677777643

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.88  E-value=1.9e-22  Score=168.50  Aligned_cols=217  Identities=16%  Similarity=0.098  Sum_probs=154.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC-CCccchhhhc--CCCceEEEecccCCccc-----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWI--GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~~~~~--~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.. ...+.+....  ...++.++++|+++...           
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREG-ADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999 99999888632 1112222221  12468889999998631           


Q ss_pred             -CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                       .++|++||+||......     ..+++...+++|+.++..+++++.+.-   .++|++||...+.              
T Consensus       126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~--------------  191 (294)
T 3r3s_A          126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ--------------  191 (294)
T ss_dssp             HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS--------------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc--------------
Confidence             36999999999754211     334567789999999999999997653   3899999988763              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+.   +++++.++||.++++.......  .......+         ........
T Consensus       192 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~--~~~~~~~~---------~~~~p~~r  258 (294)
T 3r3s_A          192 --PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ--TQDKIPQF---------GQQTPMKR  258 (294)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTS--CGGGSTTT---------TTTSTTSS
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCC--CHHHHHHH---------HhcCCCCC
Confidence              23344679999999999999988764   8999999999998764110000  00000001         11111234


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      +..++|+|+++++++....    +..+++.+|..+
T Consensus       259 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          259 AGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            6789999999999997643    457888887654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=4e-22  Score=167.54  Aligned_cols=220  Identities=14%  Similarity=0.110  Sum_probs=151.7

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc------CCCceEEEecccCCccc-------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI------GHPRFELIRHDVTEPLL-------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~-------   95 (297)
                      ...+|+|+||||+|+||+++++.|+++| ++|++++|+.....+....+.      ...++.++++|+++...       
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELG-SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            3457999999999999999999999999 999999996432221111111      13468899999998621       


Q ss_pred             -----CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc-----CCeEEEEecceeecCCCCCCCCC
Q 022414           96 -----IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-----GARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                           .++|+||||||......    ..+++...+++|+.++.++++++.+.     +.++|++||.. +.         
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~---------  163 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA---------  163 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc---------
Confidence                 25999999999654322    22345677899999999999987552     33899999977 21         


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                             +......|+.+|...+.+.+.++.+.   +++++++||+.++|+.....................+       
T Consensus       164 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p-------  229 (303)
T 1yxm_A          164 -------GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP-------  229 (303)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST-------
T ss_pred             -------CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCc-------
Confidence                   22233579999999999999888763   8999999999999984211111100111111111111       


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                        ...+++++|+|+++++++....    +..+++.+|..++
T Consensus       230 --~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          230 --AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             --TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             --ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence              1237899999999999997543    4467888775543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.88  E-value=2.2e-22  Score=167.78  Aligned_cols=234  Identities=16%  Similarity=0.110  Sum_probs=159.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC--------ccchhh---h--cCCCceEEEecccCCccc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--------KDNLRK---W--IGHPRFELIRHDVTEPLL   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--------~~~~~~---~--~~~~~~~~~~~Dl~~~~~   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+....        .+.+..   .  ....++.++++|+++...
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEG-ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCC-CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence            3467999999999999999999999999 9999999873221        111111   1  113478899999998632


Q ss_pred             ------------CCcCEEEEccCCCCCc--ccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCC
Q 022414           96 ------------IEVDQIYHLACPASPI--FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        96 ------------~~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~  158 (297)
                                  .++|++|||||.....  ...+++...+++|+.++..+++++.+.   +.++|++||...+......+
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  165 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP  165 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc
Confidence                        2699999999976543  234557788999999999999999764   23899999987654322222


Q ss_pred             CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHH---------HHH
Q 022414          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFI---------AQA  226 (297)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~---------~~~  226 (297)
                      ..+.     .+..+...|+.+|.+.+.+.+.++.+.   +++++.++||.+.++....  ......+.         ...
T Consensus       166 ~~~~-----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~~~  238 (287)
T 3pxx_A          166 GAGG-----PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS--APMYRQFRPDLEAPSRADAL  238 (287)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS--HHHHHHHCTTSSSCCHHHHH
T ss_pred             cccc-----cCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc--cchhhhhccccccchhHHHH
Confidence            2222     222344679999999999999988774   8999999999999886422  11111100         000


Q ss_pred             HcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      ....     ........+.+++|+|+++++++....    +..+++.+|..++
T Consensus       239 ~~~~-----~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          239 LAFP-----AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHGG-----GGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhhh-----hhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            0000     000111468899999999999997543    4478888876543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.88  E-value=3.3e-21  Score=157.46  Aligned_cols=206  Identities=15%  Similarity=0.126  Sum_probs=145.3

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------   95 (297)
                      ...++|+++||||+|+||+++++.|+++| ++|++++|+....          ..+.++++|+++...            
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~----------~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAG-DKVAITYRSGEPP----------EGFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSSCCC----------TTSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChHhh----------ccceEEEecCCCHHHHHHHHHHHHHHc
Confidence            34457999999999999999999999999 9999999964321          136788999988621            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++||+||......    ..+++...+++|+.++..+++++.+    .+. ++|++||...+.              
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--------------  151 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL--------------  151 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC--------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC--------------
Confidence            25899999999754322    3456778899999999998887643    455 899999986542              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+.   +++++.++|+.+.++....    +............++         ..
T Consensus       152 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~~p~---------~~  216 (253)
T 2nm0_A          152 --GSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV----LTDEQRANIVSQVPL---------GR  216 (253)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-------------CHHHHHTTCTT---------CS
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh----cCHHHHHHHHhcCCC---------CC
Confidence              11223579999999999999888763   6999999999987764211    111111112221111         24


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      +++++|+|+++++++..+.    +..+.+.+|..
T Consensus       217 ~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          217 YARPEEIAATVRFLASDDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCcEEEECCccc
Confidence            7899999999999997653    44677777643

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.88  E-value=5e-22  Score=164.66  Aligned_cols=221  Identities=11%  Similarity=0.055  Sum_probs=156.2

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~----------   95 (297)
                      ....+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.  ...++.++++|+++...          
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHG-CHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 999999996533222222221  12468899999998621          


Q ss_pred             --CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           96 --IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                        .++|++|||||......    ..+++...+++|+.++..+++++.+    .+. ++|++||...+.            
T Consensus       102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------  169 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR------------  169 (277)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH------------
T ss_pred             HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC------------
Confidence              26999999999654322    2345667889999999999988743    334 899999987652            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                          +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++..... ...............++         
T Consensus       170 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~p~---------  235 (277)
T 4fc7_A          170 ----GQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRR-LGGPQASLSTKVTASPL---------  235 (277)
T ss_dssp             ----TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHH-HSCCHHHHHHHHHTSTT---------
T ss_pred             ----CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhh-ccCCHHHHHHHhccCCC---------
Confidence                22334679999999999999888764   79999999999988631000 00001222223333222         


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      ..+..++|+|+++++++....    +..+++.+|..++
T Consensus       236 ~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          236 QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLT  273 (277)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccC
Confidence            236789999999999998543    4477888775444

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.88  E-value=8.6e-22  Score=161.56  Aligned_cols=214  Identities=17%  Similarity=0.156  Sum_probs=150.1

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-----------C
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----------I   96 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-----------~   96 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|..    +.....+ ...+.++++|+++...           .
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~----~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g   78 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAG-AQVVVLDIRG----EDVVADL-GDRARFAAADVTDEAAVASALDLAETMG   78 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHT-CEEEEEESSC----HHHHHHT-CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCch----HHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence            34568999999999999999999999999 9999999842    2222222 3478899999998621           2


Q ss_pred             CcCEEEEccCCCCCc--------ccccChhhhHHHhHHHHHHHHHHHHHc------------CC-eEEEEecceeecCCC
Q 022414           97 EVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV------------GA-RILLTSTSEVYGDPL  155 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~------------~~-r~v~~Ss~~~~~~~~  155 (297)
                      ++|++|||||.....        ...+++...+++|+.++..+++++.+.            +. ++|++||...+.   
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  155 (257)
T 3tl3_A           79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD---  155 (257)
T ss_dssp             CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C---
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC---
Confidence            799999999965321        233456788999999999999988652            23 799999987652   


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCe
Q 022414          156 VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL  232 (297)
Q Consensus       156 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  232 (297)
                                   +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++....    +............+.
T Consensus       156 -------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~  218 (257)
T 3tl3_A          156 -------------GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS----LPEEARASLGKQVPH  218 (257)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-------CHHHHHHHHHTSSS
T ss_pred             -------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh----ccHHHHHHHHhcCCC
Confidence                         2223467999999999999988876   47999999999998876322    112222222222221


Q ss_pred             EEecCCceeEeeeeHHHHHHHHHHHHhcCC--CccEEecCCCccc
Q 022414          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFT  275 (297)
Q Consensus       233 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s  275 (297)
                              ...+.+++|+|++++++++.+.  +..+++.+|..++
T Consensus       219 --------~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          219 --------PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             --------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             --------CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence                    0247789999999999998755  4578888776554

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.88  E-value=8.5e-22  Score=161.18  Aligned_cols=215  Identities=17%  Similarity=0.149  Sum_probs=147.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+ +...+ ..++.++++|+++...            .+
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEG-AKVAFSDINEAAGQQ-LAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHHH-HHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 999999986432221 11122 2468889999998632            25


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      +|++||+||......    ..+++...+++|+.++..+.+++    ++.+.++|++||...+.                +
T Consensus        81 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  144 (253)
T 1hxh_A           81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL----------------P  144 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------C
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcC----------------C
Confidence            899999999764322    23446678899998877776655    33445899999987652                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---h--CCcEEEEeeccccCCCCCCCChhHH-HHHHHHHHcCCCeEEecCCceeEe
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---H--GIEIRIARIFNTYGPRMNIDDGRVV-SNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~--~~~~~ivrp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      ..+...|+.+|.+.+.+.+.++.+   .  ++++++++|+.++++....    .. ............     .......
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~-----~~~p~~~  215 (253)
T 1hxh_A          145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA----SLPKGVSKEMVLHDP-----KLNRAGR  215 (253)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH----HSCTTCCHHHHBCBT-----TTBTTCC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhh----ccchhhhHHHHhhhh-----ccCccCC
Confidence            234467999999999999888765   3  8999999999999864110    00 000001011100     0011124


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      +.+++|+|+++++++..+.    +..+++.+|.
T Consensus       216 ~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          216 AYMPERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             EECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             CCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            7899999999999998653    4466777653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.88  E-value=8.4e-22  Score=160.47  Aligned_cols=202  Identities=16%  Similarity=0.171  Sum_probs=129.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----------cCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----------LIE   97 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----------~~~   97 (297)
                      ...+|+++||||+|+||+++++.|.+ | +.|++++|+..    .+.......++.++.+|+++..           ..+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g-~~v~~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-D-HIVYALGRNPE----HLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-T-SEEEEEESCHH----HHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-C-CeEEEEeCCHH----HHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCC
Confidence            34579999999999999999999987 8 89999998532    2222222356888999987641           126


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      +|++||+||......    ..+++...+++|+.++..+++++.    +.+.++|++||...+.                +
T Consensus        76 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------~  139 (245)
T 3e9n_A           76 VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNG----------------P  139 (245)
T ss_dssp             CSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-----------------------
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccccc----------------C
Confidence            999999999765433    234456778999999888877763    4456899999988753                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++....        +.....  .       ......+++
T Consensus       140 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--------~~~~~~--~-------~~~~~~~~~  202 (245)
T 3e9n_A          140 HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG--------LMDSQG--T-------NFRPEIYIE  202 (245)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------CCGGGSC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh--------hhhhhh--c-------ccccccCCC
Confidence            333467999999999999988876   47999999999998864211        110000  0       001124789


Q ss_pred             HHHHHHHHHHHHhcCC-CccEEec
Q 022414          247 VSDMVDGLIRLMEGEN-TGPINIG  269 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~-~~~~~i~  269 (297)
                      ++|+|++++++++.+. .+++++.
T Consensus       203 p~dvA~~i~~l~~~~~~~~~~~i~  226 (245)
T 3e9n_A          203 PKEIANAIRFVIDAGETTQITNVD  226 (245)
T ss_dssp             HHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCccceeeeE
Confidence            9999999999999887 4455553

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.88  E-value=2.4e-21  Score=161.27  Aligned_cols=215  Identities=13%  Similarity=0.016  Sum_probs=152.1

Q ss_pred             cCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||+  |+||+++++.|+++| ++|++++|+.. ..+.+..+.. ...+.++.+|+++..            
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G-~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREG-AQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTT-CEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcC-CEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999  999999999999999 99999999752 1122222211 124678899999862            


Q ss_pred             cCCcCEEEEccCCCCC--------cccccChhhhHHHhHHHHHHHHHHHHHc----CCeEEEEecceeecCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASP--------IFYKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                      ..++|++|||||....        ....+++...+++|+.++..+++++.+.    +.++|++||...+.          
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------  166 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK----------  166 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS----------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc----------
Confidence            1269999999997643        1123446678899999999999998664    24899999977642          


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                            +......|+.+|.+.+.+.+.++.+.   +++++.++||.++++......  ........+....++       
T Consensus       167 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~p~-------  231 (285)
T 2p91_A          167 ------VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT--GFHLLMEHTTKVNPF-------  231 (285)
T ss_dssp             ------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT--THHHHHHHHHHHSTT-------
T ss_pred             ------CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc--chHHHHHHHHhcCCC-------
Confidence                  22334679999999999999888763   799999999999998642211  112222222222221       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                        ..+.+++|+|+++++++....   .| .+++.+|..
T Consensus       232 --~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          232 --GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             --SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCcc
Confidence              135789999999999987533   34 677877643

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.88  E-value=1.3e-21  Score=161.49  Aligned_cols=211  Identities=14%  Similarity=0.031  Sum_probs=151.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhhc-CCCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWI-GHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~Dl~~~~~------------   95 (297)
                      .++|+|+||||+|+||+++++.|+++| ++|+++.+..... .+....+. ...++.++.+|+++...            
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADG-FNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            456899999999999999999999999 8887765432222 11122111 12478899999998631            


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH-----HcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK-----RVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      .++|++||+||......    ..+++...+++|+.++.++++++.     +.+. ++|++||...+.             
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  169 (267)
T 4iiu_A          103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM-------------  169 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH-------------
T ss_pred             CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc-------------
Confidence            26999999999765433    334567788999999999998873     3444 899999987652             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                         +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++.....     ...........++         .
T Consensus       170 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~p~---------~  232 (267)
T 4iiu_A          170 ---GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-----ESALKEAMSMIPM---------K  232 (267)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-----HHHHHHHHHTCTT---------C
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-----HHHHHHHHhcCCC---------C
Confidence               22344679999999999998888764   79999999999998864332     2223333333222         2


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      .+.+++|+|+++++++....    +..+++.+|
T Consensus       233 ~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          233 RMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence            36789999999999998643    446777665

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.88  E-value=1.1e-21  Score=159.96  Aligned_cols=211  Identities=16%  Similarity=0.129  Sum_probs=151.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+.....  ..++.++++|+++...            .+
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADG-ATVIVSDINAEGAKAAAASI--GKKARAIAADISDPGSVKALFAEIQALTGG   80 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHHH--CTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            457999999999999999999999999 99999998653322222222  3478899999998631            26


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHH----HHHcC-C-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +|++|||||......    ..+++...+++|+.++..++++    +++.+ . ++|++||...+.               
T Consensus        81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  145 (247)
T 3rwb_A           81 IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA---------------  145 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH---------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc---------------
Confidence            999999999765432    2344667889999999999888    45555 4 899999987653               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++............+....   .+         ...+
T Consensus       146 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~~---------~~r~  212 (247)
T 3rwb_A          146 -GTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---QA---------MKGK  212 (247)
T ss_dssp             -TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---SS---------SCSC
T ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---cc---------cCCC
Confidence             2233467999999999999988876   589999999999987642111111111111110   11         1235


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      ..++|+|+++++++....    +..+++.+|
T Consensus       213 ~~pedva~~v~~L~s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          213 GQPEHIADVVSFLASDDARWITGQTLNVDAG  243 (247)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            689999999999998653    446777765

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.88  E-value=1.3e-21  Score=161.22  Aligned_cols=221  Identities=13%  Similarity=0.023  Sum_probs=153.5

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCccc---------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL---------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~---------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+   ....++.++++|+++...         
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAG-AAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            45668999999999999999999999999 99999999654322222221   222358899999998631         


Q ss_pred             ---CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCC
Q 022414           96 ---IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 ---~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                         .++|++|||||......    ..+++...+++|+.++..+++++.+    .+. ++|++||...+.           
T Consensus        83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------  151 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ-----------  151 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS-----------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC-----------
Confidence               26999999999765432    2344667889999999999998844    334 799999987642           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCC------hhHHHHHHHHHHcCCCeEE
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD------GRVVSNFIAQAIRGEPLTV  234 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~  234 (297)
                           +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++......      ......+..........+ 
T Consensus       152 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  225 (265)
T 3lf2_A          152 -----PEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP-  225 (265)
T ss_dssp             -----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT-
T ss_pred             -----CCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC-
Confidence                 33345789999999999999888764   799999999999875310000      000011111111111011 


Q ss_pred             ecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       235 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                            ...+..++|+|+++++++....   .| .+++.+|.
T Consensus       226 ------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          226 ------LGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             ------TCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred             ------cCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence                  1246789999999999998543   44 67777764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.88  E-value=3.3e-21  Score=158.94  Aligned_cols=226  Identities=11%  Similarity=0.114  Sum_probs=154.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc--------cC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL--------LI   96 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~--------~~   96 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+   .....+..+.+|+++..        ..
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g   84 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEG-ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP   84 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC
Confidence            44568999999999999999999999999 99999999754332222221   12345778899998863        23


Q ss_pred             CcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||.......    .+++...+++|+.++..+++++    ++.+. ++|++||...+                
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------------  148 (267)
T 3t4x_A           85 KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI----------------  148 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGT----------------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhc----------------
Confidence            79999999997654332    2345567899999987777666    34555 89999998765                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCC-------CChhHHHHHHHHHHcCCCeEEecC
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNI-------DDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                      .+......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++....       .................     ..
T Consensus       149 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  223 (267)
T 3t4x_A          149 MPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN-----RP  223 (267)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH-----CT
T ss_pred             cCCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc-----CC
Confidence            233445789999999999999998764   5899999999887652100       00000001111111100     00


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      ......+.+++|+|+++++++....    +..+++.+|...+
T Consensus       224 ~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          224 TSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             TCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             cccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            0112357899999999999998543    4478888876544

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.88  E-value=4.1e-21  Score=158.51  Aligned_cols=217  Identities=17%  Similarity=0.080  Sum_probs=155.2

Q ss_pred             ccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCccc-------
Q 022414           25 FSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL-------   95 (297)
Q Consensus        25 ~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~-------   95 (297)
                      +..+...+|+++||||+|+||+++++.|+++| ++|+++++......+.+...+.  ...+.++++|+++...       
T Consensus        24 m~~~~l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~  102 (271)
T 3v2g_A           24 MTSISLAGKTAFVTGGSRGIGAAIAKRLALEG-AAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRE  102 (271)
T ss_dssp             HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            34455678999999999999999999999999 9999987754322222222221  2468889999998631       


Q ss_pred             -----CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCC
Q 022414           96 -----IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                           .++|++|||||......    ..+++...+++|+.++..+++++.+.   +.++|++||.....           
T Consensus       103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~-----------  171 (271)
T 3v2g_A          103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL-----------  171 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC-----------
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc-----------
Confidence                 26999999999765432    23456778899999999999999765   33899998865421           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                          .+......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++...... ...    .......+.        
T Consensus       172 ----~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~~~----~~~~~~~~~--------  234 (271)
T 3v2g_A          172 ----VPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG-DHA----EAQRERIAT--------  234 (271)
T ss_dssp             ----CCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC-SSH----HHHHHTCTT--------
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc-hhH----HHHHhcCCC--------
Confidence                123345679999999999999888764   799999999999988643221 111    112222221        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                       ..+..++|+|+++++++....    +..+++.+|
T Consensus       235 -~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          235 -GSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG  268 (271)
T ss_dssp             -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence             136789999999999996543    446777765

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.88  E-value=2.3e-21  Score=159.13  Aligned_cols=220  Identities=14%  Similarity=0.001  Sum_probs=148.4

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-C-CCceEEEecccCCccc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G-HPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|+++.+......+.....+ . ...+.++++|+++...           
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEG-ANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 999988554332222221111 1 2468889999998631           


Q ss_pred             -CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                       .++|++||+||......     ..+++...+++|+.++..+++++.+.-   -++|++||...+..             
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  150 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG-------------  150 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC-------------
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC-------------
Confidence             26999999998652211     233456788999999999999997753   27999999876511             


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHhC--CcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                        +......|+.+|.+.+.+.+.++.+.+  ++++.+.||.+.++......   .......+         ........+
T Consensus       151 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~---------~~~~p~~r~  216 (259)
T 3edm_A          151 --GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT---KPEVRERV---------AGATSLKRE  216 (259)
T ss_dssp             --CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------------CC
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccccc---ChHHHHHH---------HhcCCCCCC
Confidence              223346799999999999999887753  89999999999876521100   01111111         111223457


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCcccH
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~  276 (297)
                      .+++|+|+++++++....    +..+++.+|.....
T Consensus       217 ~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          217 GSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred             cCHHHHHHHHHHHcCccccCccCCEEEECCCcCCCC
Confidence            799999999999997653    44678877655443

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.87  E-value=4.6e-21  Score=156.66  Aligned_cols=204  Identities=9%  Similarity=-0.006  Sum_probs=137.2

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~-----------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..++.++++|+++...           
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEG-FTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            34567999999999999999999999999 9999999975443332222211 2468899999998621           


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.              
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  147 (252)
T 3h7a_A           82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR--------------  147 (252)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC--------------
T ss_pred             CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC--------------
Confidence            36899999999765432    23446678899999998888877    44555 899999987642              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcE-EEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEI-RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~-~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        +......|+.+|.+.+.+.+.++.+.   ++++ +.+.||.+..+....    .........         .......
T Consensus       148 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~----~~~~~~~~~---------~~~~~~~  212 (252)
T 3h7a_A          148 --GGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE----RREQMFGKD---------ALANPDL  212 (252)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------
T ss_pred             --CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhc----cchhhhhhh---------hhcCCcc
Confidence              23344679999999999999888763   7888 899999887664211    111111100         1111122


Q ss_pred             eeeeHHHHHHHHHHHHhcCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~  262 (297)
                       +.+++|+|+++++++..+.
T Consensus       213 -~~~pedvA~~~~~l~s~~~  231 (252)
T 3h7a_A          213 -LMPPAAVAGAYWQLYQQPK  231 (252)
T ss_dssp             --CCHHHHHHHHHHHHHCCG
T ss_pred             -CCCHHHHHHHHHHHHhCch
Confidence             8899999999999999765

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.87  E-value=1.5e-21  Score=162.46  Aligned_cols=215  Identities=11%  Similarity=0.064  Sum_probs=151.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCC---eEEEEecCCCCCccchhhh---cCCCceEEEecccCCccc-------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL-------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~---~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~-------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| +   .|++.+|+.....+....+   ....++.++++|+++...       
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G-~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEAS-NGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcC-CCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            3468999999999999999999999998 6   9999998643322211111   123468899999998632       


Q ss_pred             -----CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCC
Q 022414           96 -----IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~  160 (297)
                           .++|++|||||......     ..+++...+++|+.++..+++++    ++.+. ++|++||...+.        
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~--------  180 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD--------  180 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--------
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC--------
Confidence                 26999999999754211     33456778999999999999988    44454 899999987642        


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                              +......|+.+|.+.+.+.+.++.+   .+++++.++||.+..+......... ...........       
T Consensus       181 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~-------  244 (287)
T 3rku_A          181 --------AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGN-EEQAKNVYKDT-------  244 (287)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTC-HHHHHHHHTTS-------
T ss_pred             --------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCc-HHHHHHhhccc-------
Confidence                    3334467999999999999999887   4799999999999876310000000 01111111111       


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                           .++.++|+|+++++++..+.    ++.+.+.+++.
T Consensus       245 -----~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          245 -----TPLMADDVADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             -----CCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             -----CCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence                 12389999999999999876    44667766644

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.87  E-value=4.4e-21  Score=157.41  Aligned_cols=212  Identities=14%  Similarity=0.060  Sum_probs=149.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC--CccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--SKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      +|+++||||+|+||+++++.|+++| ++|++++|+...  ..+....+.. ..++.++++|+++...            .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADG-FDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999 999999986533  1111111111 2468889999998631            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||+||......    ..+++...+++|+.++..+++++.+    .+  .++|++||...+.              
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  146 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ--------------  146 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS--------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc--------------
Confidence            6999999999765422    2344667889999999999888855    34  4899999987642              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHH-----------HHHHHHHcCCCe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVS-----------NFIAQAIRGEPL  232 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~-----------~~~~~~~~~~~~  232 (297)
                        +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++..    .....           .....+....+ 
T Consensus       147 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p-  219 (258)
T 3a28_C          147 --GFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMW----EQIDAELSKINGKPIGENFKEYSSSIA-  219 (258)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHH----HHHHHHHHHHHCCCTTHHHHHHHTTCT-
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhh----hhhhhhhccccCCchHHHHHHHHhcCC-
Confidence              2233467999999999999988866   379999999999876531    01110           11111111111 


Q ss_pred             EEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       233 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                              ...+.+++|+|+++++++....    +..+++.+|..
T Consensus       220 --------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          220 --------LGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             --------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred             --------CCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence                    1237899999999999997653    44677777644

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.87  E-value=2.9e-21  Score=157.79  Aligned_cols=200  Identities=14%  Similarity=0.099  Sum_probs=144.9

Q ss_pred             cccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----------
Q 022414           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        26 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----------   94 (297)
                      +....++|+|+||||+|+||+++++.|+++| ++|++++|+.....           ...+.+|+++..           
T Consensus        16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~-----------~~~~~~d~~d~~~v~~~~~~~~~   83 (251)
T 3orf_A           16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKS-WNTISIDFRENPNA-----------DHSFTIKDSGEEEIKSVIEKINS   83 (251)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCTTS-----------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred             ccccccCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCccccc-----------ccceEEEeCCHHHHHHHHHHHHH
Confidence            3444557999999999999999999999999 99999999754322           124566776641           


Q ss_pred             -cCCcCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       ..++|++|||||.....     ...+++...+++|+.++..+++++.+.-   .++|++||...+              
T Consensus        84 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~--------------  149 (251)
T 3orf_A           84 KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL--------------  149 (251)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG--------------
T ss_pred             HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhc--------------
Confidence             23689999999975432     2344567788999999999999997743   279999998765              


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                        .+......|+.+|.+.+.+.+.++.+     .+++++.++||.+.++.            ........         .
T Consensus       150 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~------------~~~~~~~~---------~  206 (251)
T 3orf_A          150 --NRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT------------NRKYMSDA---------N  206 (251)
T ss_dssp             --SCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH------------HHHHCTTS---------C
T ss_pred             --cCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc------------hhhhcccc---------c
Confidence              23344567999999999999998876     47999999999887642            11111111         1


Q ss_pred             eEeeeeHHHHHHHHHHHHhc---CC--CccEEecCCCcc
Q 022414          241 TRSFCYVSDMVDGLIRLMEG---EN--TGPINIGNPGEF  274 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~---~~--~~~~~i~~~~~~  274 (297)
                      ...+++++|+|++++.++..   ..  +..+++..++..
T Consensus       207 ~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          207 FDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             GGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             ccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence            23578899999999999988   22  446777665543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.87  E-value=9.6e-22  Score=162.67  Aligned_cols=217  Identities=16%  Similarity=0.057  Sum_probs=153.4

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ....+.++++|+++...           
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAG-AHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI  107 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            44578999999999999999999999999 999999997654443332221 13468899999998632           


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.              
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~--------------  173 (275)
T 4imr_A          108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR--------------  173 (275)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC--------------
Confidence            26999999999755433    23445677899999999999887    44555 899999987652              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCC-CeEEecCCceeE
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE-PLTVQAPGTQTR  242 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  242 (297)
                        +..+...|+.+|.+.+.+.+.++.+.   +++++.++||.+..+..... ............... ++         .
T Consensus       174 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~p~---------~  241 (275)
T 4imr_A          174 --PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADR-RAQDPEGWDEYVRTLNWM---------G  241 (275)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHH-HHHCHHHHHHHHHHHSTT---------C
T ss_pred             --CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccc-cccChHHHHHHHhhcCcc---------C
Confidence              23334569999999999999988774   79999999999977531100 000011111111111 11         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      .+..++|+|+++++++....    +..+++.+|
T Consensus       242 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          242 RAGRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             CCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence            35678999999999998653    446677654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.87  E-value=2.4e-21  Score=160.48  Aligned_cols=215  Identities=13%  Similarity=0.004  Sum_probs=152.7

Q ss_pred             cCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||+  |+||+++++.|+++| ++|++++|+.. ..+....+.. ...+.++.+|+++..            
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G-~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQG-ATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTT-CEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCC-CEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357899999999  999999999999999 99999999753 2222222211 124778899999862            


Q ss_pred             cCCcCEEEEccCCCCC--------cccccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASP--------IFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      ..++|++||+||....        ....+++...+++|+.++..+++++.+.   +.++|++||...+.           
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  150 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----------  150 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC-----------
Confidence            1268999999997643        1223456678899999999999999775   34899999976542           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                           +..+...|+.+|.+.+.+.+.++.+.   +++++.++||.+.++......  ........+....++        
T Consensus       151 -----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~--------  215 (275)
T 2pd4_A          151 -----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA--DFRMILKWNEINAPL--------  215 (275)
T ss_dssp             -----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST--THHHHHHHHHHHSTT--------
T ss_pred             -----CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc--ccHHHHHHHHhcCCc--------
Confidence                 22334679999999999999888764   899999999999987532111  112222222222221        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                       ..+.+++|+|+++++++....   .| .+++.++..
T Consensus       216 -~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          216 -RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH  251 (275)
T ss_dssp             -SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence             125689999999999997532   44 567776643

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.87  E-value=1.8e-21  Score=159.52  Aligned_cols=212  Identities=16%  Similarity=0.029  Sum_probs=147.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc------------CCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------IEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------~~~   98 (297)
                      +|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ...++.++.+|+++...            .++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDG-FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5889999999999999999999999 999999986432221111111 12368889999998621            269


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC-C-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-A-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      |++||+||......    ..+++...+++|+.++..+++++.+    .+ . ++|++||...+.                
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  144 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----------------  144 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC----------------
Confidence            99999999754322    2234566889999998888777643    44 4 899999987542                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHH-----------HHHHHHHcCCCeEE
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVS-----------NFIAQAIRGEPLTV  234 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~-----------~~~~~~~~~~~~~~  234 (297)
                      +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++..    .....           .....+....+   
T Consensus       145 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p---  217 (256)
T 1geg_A          145 GNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW----AEIDRQVSEAAGKPLGYGTAEFAKRIT---  217 (256)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH----HHHHHHHHHHHTCCTTHHHHHHHTTCT---
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchh----hhhhhhccccccCChHHHHHHHHhcCC---
Confidence            2223467999999999999988876   479999999999987641    11100           01111111111   


Q ss_pred             ecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       235 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                            ...+.+++|+|+++++++..+.    +..+.+.+|..
T Consensus       218 ------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          218 ------LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             ------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             ------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence                  1247899999999999997652    44677777643

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.87  E-value=3.2e-21  Score=155.97  Aligned_cols=196  Identities=14%  Similarity=-0.018  Sum_probs=135.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~~   98 (297)
                      ++|+|+||||+|+||+++++.|+++| ++|++++|+..... .+...+  .++.++.+|+++...            .++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKG-YRVGLMARDEKRLQ-ALAAEL--EGALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHHS--TTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHH-HHHHHh--hhceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999 99999998643211 111112  267889999998621            268


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHH----HHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++||+||......    ..+++...+++|+.++..+++.    +++.+. ++|++||...+.                +
T Consensus        80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------~  143 (234)
T 2ehd_A           80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN----------------P  143 (234)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS----------------C
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC----------------C
Confidence            99999999754322    2344567889999998765554    455666 899999987652                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ..+...|+.+|.+.+.+.+.+..+   .++++++++|+.+.++...        ..     . .  .        ..+++
T Consensus       144 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--------~~-----~-~--~--------~~~~~  199 (234)
T 2ehd_A          144 FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG--------NT-----P-G--Q--------AWKLK  199 (234)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------------------CC
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc--------cc-----c-c--c--------cCCCC
Confidence            234467999999999998887765   4799999999988765311        00     0 0  0        01579


Q ss_pred             HHHHHHHHHHHHhcCC---CccEEecC
Q 022414          247 VSDMVDGLIRLMEGEN---TGPINIGN  270 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~---~~~~~i~~  270 (297)
                      ++|+|++++.++..+.   .|...+..
T Consensus       200 ~~dvA~~~~~l~~~~~~~~~g~~~~~~  226 (234)
T 2ehd_A          200 PEDVAQAVLFALEMPGHAMVSEIELRP  226 (234)
T ss_dssp             HHHHHHHHHHHHHSCCSSCCCEEECCC
T ss_pred             HHHHHHHHHHHhCCCcccccceEEEee
Confidence            9999999999998765   44444443

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=8.8e-22  Score=162.44  Aligned_cols=220  Identities=15%  Similarity=0.126  Sum_probs=149.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCccc-----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.   ...++.++.+|+++...           
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKG-AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999 999999986432221111111   12358889999998621           


Q ss_pred             -CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHH----HHHHHHcC---C-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM----LGLAKRVG---A-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l----~~~~~~~~---~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                       .++|++||+||...    .+++...+++|+.++..+    +..+++.+   . ++|++||...+.              
T Consensus        84 ~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  145 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--------------  145 (267)
T ss_dssp             HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--------------
T ss_pred             cCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC--------------
Confidence             25899999999653    456778889998866554    44444442   4 899999987753              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHH--H---HhCCcEEEEeeccccCCCCCCCC-hhHHHH---HHHHHHcCCCeEEecC
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYH--R---QHGIEIRIARIFNTYGPRMNIDD-GRVVSN---FIAQAIRGEPLTVQAP  237 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~--~---~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~  237 (297)
                        +......|+.+|.+.+.+.+.++  .   ..+++++.++||.+.++...... ......   +...+..         
T Consensus       146 --~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------  214 (267)
T 2gdz_A          146 --PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD---------  214 (267)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH---------
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH---------
Confidence              22234579999999999988742  2   24799999999999876311000 000000   0000000         


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC--CccEEecCCCcccHHHH
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFTMLEL  279 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e~  279 (297)
                      ......+++++|+|+++++++....  +..+++.+++.+++.|+
T Consensus       215 ~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          215 MIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred             HhccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence            0011246899999999999998765  55789988887776654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.87  E-value=3.3e-21  Score=159.78  Aligned_cols=223  Identities=18%  Similarity=0.123  Sum_probs=153.4

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC---------Cccchhh---hc--CCCceEEEecccCCcc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG---------SKDNLRK---WI--GHPRFELIRHDVTEPL   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~---------~~~~~~~---~~--~~~~~~~~~~Dl~~~~   94 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|....         ..+.+..   .+  ....+.++.+|+++..
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEG-ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            3467999999999999999999999999 999999884221         1121111   11  1346889999999862


Q ss_pred             c------------CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcC--CeEEEEecceeec
Q 022414           95 L------------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYG  152 (297)
Q Consensus        95 ~------------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~v~~Ss~~~~~  152 (297)
                      .            .++|++|||||......    ..++++..+++|+.++..+++++.    +.+  .++|++||...+.
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            1            36999999999765432    334566789999999999888863    333  3899999987652


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcC
Q 022414          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG  229 (297)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~  229 (297)
                                      +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++...   ..............
T Consensus       167 ----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~  227 (277)
T 3tsc_A          167 ----------------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGS---GDMVTAVGQAMETN  227 (277)
T ss_dssp             ----------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGS---HHHHHHHHHHHHTC
T ss_pred             ----------------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCccc---chhhhhhhhccccc
Confidence                            23334679999999999999888763   799999999999887521   11111122111111


Q ss_pred             CCe-EEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          230 EPL-TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       230 ~~~-~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      ... ........ ..+.+++|+|+++++++....    +..+++.+|.
T Consensus       228 ~~~~~~~~~~~p-~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          228 PQLSHVLTPFLP-DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             GGGTTTTCCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhhhccC-CCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            100 00011111 247899999999999997654    4467777763

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.87  E-value=4e-21  Score=158.25  Aligned_cols=219  Identities=18%  Similarity=0.134  Sum_probs=146.5

Q ss_pred             cccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc------
Q 022414           24 RFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------   95 (297)
Q Consensus        24 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~------   95 (297)
                      .+..++..+|+++||||+|+||+++++.|+++| ++|++..+......+.+...+  ....+.++++|+++...      
T Consensus        19 ~~~~m~~~~k~~lVTGas~GIG~aia~~la~~G-~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   97 (267)
T 3u5t_A           19 YFQSMMETNKVAIVTGASRGIGAAIAARLASDG-FTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFA   97 (267)
T ss_dssp             --------CCEEEEESCSSHHHHHHHHHHHHHT-CEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cccccccCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            344455678999999999999999999999999 999887654332222222221  12468889999998631      


Q ss_pred             ------CCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCC
Q 022414           96 ------IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        96 ------~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                            .++|++|||||.......    .++++..+++|+.++..+++++.+.   +-++|++||...+.          
T Consensus        98 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  167 (267)
T 3u5t_A           98 TAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL----------  167 (267)
T ss_dssp             HHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH----------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc----------
Confidence                  269999999997654332    2335667889999999999988664   23799999987642          


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                            +......|+.+|.+.+.+.+.++.+.   +++++.+.||.+..+.....   ........+....+        
T Consensus       168 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~p--------  230 (267)
T 3u5t_A          168 ------LHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG---KSDEVRDRFAKLAP--------  230 (267)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------CHHHHHTSST--------
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc---CCHHHHHHHHhcCC--------
Confidence                  22334679999999999999998874   79999999999987652110   11111122222222        


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                       ...+..++|+|+++++++....   .| .+++.+|
T Consensus       231 -~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          231 -LERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             -TCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             -CCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence             1246789999999999997654   44 5666654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.87  E-value=3.4e-21  Score=158.39  Aligned_cols=195  Identities=15%  Similarity=0.034  Sum_probs=139.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+++++||||+|+||+++++.|+++| ++|++++|+.....+....+. ....+.++.+|+++...            .
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLG-ARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            457999999999999999999999999 999999996533222221111 12468899999998632            2


Q ss_pred             CcCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||+||.....     ...+++...+++|+.++..+++++..    .+. ++|++||...+               
T Consensus       106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~---------------  170 (262)
T 3rkr_A          106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGK---------------  170 (262)
T ss_dssp             CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSS---------------
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhc---------------
Confidence            699999999973221     12344667889999999999888743    444 89999998765               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                       .+......|+.+|.+.+.+.+.++.+   .+++++.++||.+..+....        .    ..         ......
T Consensus       171 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--------~----~~---------~~~~~~  228 (262)
T 3rkr_A          171 -NPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG--------L----SA---------KKSALG  228 (262)
T ss_dssp             -CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------
T ss_pred             -CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc--------c----cc---------cccccc
Confidence             23344577999999999999988866   47999999999887653110        0    00         011234


Q ss_pred             eeeHHHHHHHHHHHHhcCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~  262 (297)
                      ++.++|+|+++++++..+.
T Consensus       229 ~~~p~dvA~~v~~l~s~~~  247 (262)
T 3rkr_A          229 AIEPDDIADVVALLATQAD  247 (262)
T ss_dssp             CCCHHHHHHHHHHHHTCCT
T ss_pred             CCCHHHHHHHHHHHhcCcc
Confidence            6799999999999998765

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=2.9e-21  Score=160.41  Aligned_cols=220  Identities=15%  Similarity=0.042  Sum_probs=152.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CC---ceEEEecccCCccc----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HP---RFELIRHDVTEPLL----------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~Dl~~~~~----------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..   ++.++.+|+++...          
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEG-ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999 9999999965322221111111 12   68899999998621          


Q ss_pred             --CCcCEEEEccCCCCCcc--------cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCC
Q 022414           96 --IEVDQIYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        96 --~~~d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                        .++|++|||||......        ..+++...+++|+.++..+++++.+    .+.++|++||...+...       
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  155 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA-------  155 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC-------
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC-------
Confidence              26999999999764322        2234667889999999999988854    33589999998765311       


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC--ChhH---HHHHHHHHHcCCCeE
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID--DGRV---VSNFIAQAIRGEPLT  233 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~--~~~~---~~~~~~~~~~~~~~~  233 (297)
                              ..+...|+.+|.+.+.+.+.++.+   .+++++.++|+.++++.....  ....   ............+  
T Consensus       156 --------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  225 (280)
T 1xkq_A          156 --------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP--  225 (280)
T ss_dssp             --------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT--
T ss_pred             --------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCC--
Confidence                    133467999999999999988765   479999999999998752110  0000   0111111111111  


Q ss_pred             EecCCceeEeeeeHHHHHHHHHHHHhcC---C--CccEEecCCCcc
Q 022414          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGE---N--TGPINIGNPGEF  274 (297)
Q Consensus       234 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~--~~~~~i~~~~~~  274 (297)
                             ...+.+++|+|+++++++..+   .  +..+++.+|..+
T Consensus       226 -------~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          226 -------IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             -------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             -------CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence                   124789999999999998754   2  446788776543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.87  E-value=7.4e-21  Score=155.66  Aligned_cols=214  Identities=16%  Similarity=0.101  Sum_probs=148.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~~   98 (297)
                      +|+++||||+|+||+++++.|+++|. ..|++++|+.....+ +.+.+ ..++.++++|+++...            .++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKK-LKEKY-GDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHH-HHHHH-GGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHH-HHHHh-CCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            58999999999999999999999852 788888886432222 11222 2468899999998631            269


Q ss_pred             CEEEEccCCCCC-cc----cccChhhhHHHhHHHHHHHHHHH----HHcCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++|||||.... ..    ..+++...+++|+.++..+++++    ++.+.++|++||...+.                +
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~----------------~  143 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNM----------------Y  143 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCC----------------S
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhcc----------------C
Confidence            999999997543 11    23446678899999999999888    55556899999987652                3


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHHh-CCcEEEEeeccccCCCCCCCCh-----hHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIARIFNTYGPRMNIDDG-----RVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ivrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      ......|+.+|.+.+.+.+.++.+. +++++.++||.+.++.......     .........+....+.         ..
T Consensus       144 ~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~r  214 (254)
T 3kzv_A          144 FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN---------NQ  214 (254)
T ss_dssp             SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTT---------C-
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhc---------CC
Confidence            3445689999999999999988774 7999999999999876432110     0011122222221111         23


Q ss_pred             eeeHHHHHHHHHHHHhcC-C---Cc-cEEecCCC
Q 022414          244 FCYVSDMVDGLIRLMEGE-N---TG-PINIGNPG  272 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~-~---~~-~~~i~~~~  272 (297)
                      +.+++|+|+++++++... .   +| .+++.+++
T Consensus       215 ~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          215 LLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             ---CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             cCCcccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence            678899999999999876 2   45 55555543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.87  E-value=1.1e-20  Score=156.96  Aligned_cols=215  Identities=11%  Similarity=0.007  Sum_probs=155.5

Q ss_pred             cCCCEEEEEcCCch--hHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGF--IGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~--iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||+|+  ||+++++.|+++| ++|++++|+.  ..+.+..+.. ...+.++.+|+++..            
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G-~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREG-AELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTT-CEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcC-CEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            45799999999977  9999999999999 9999999975  2233322211 235889999999862            


Q ss_pred             cCCcCEEEEccCCCCCc---------ccccChhhhHHHhHHHHHHHHHHHHHc----CCeEEEEecceeecCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPI---------FYKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                      ..++|++|||||.....         ...+++...+++|+.++..+++++.+.    +.++|++||...+.         
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~---------  171 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK---------  171 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS---------
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc---------
Confidence            23689999999976531         233446678899999999999988653    34899999987652         


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                             +......|+.+|.+.+.+.+.++.+   .++++..++||.+.++......  .............+.      
T Consensus       172 -------~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~------  236 (280)
T 3nrc_A          172 -------AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS--NFKKMLDYNAMVSPL------  236 (280)
T ss_dssp             -------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT--THHHHHHHHHHHSTT------
T ss_pred             -------CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc--chHHHHHHHHhcCCC------
Confidence                   3334567999999999999988876   4799999999999987643221  112233333222221      


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                         ..+..++|+|+++++++....    +..+++.+|..+
T Consensus       237 ---~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          237 ---KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             ---CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             ---CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence               236789999999999998643    447788877543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.87  E-value=5.3e-21  Score=155.87  Aligned_cols=204  Identities=16%  Similarity=0.119  Sum_probs=143.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....          .+..+.+|+++...            .+
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~g~   81 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADG-HKVAVTHRGSGAPK----------GLFGVEVDVTDSDAVDRAFTAVEEHQGP   81 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSSCCCT----------TSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChHHHH----------HhcCeeccCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 99999999643221          11137889987621            25


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||......    ..+++...+++|+.++..+++++.+    .+. ++|++||...+.                
T Consensus        82 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------  145 (247)
T 1uzm_A           82 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW----------------  145 (247)
T ss_dssp             CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc----------------
Confidence            899999999764321    2345677889999999999888743    555 899999986542                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|+.+|.+.+.+.+.++.+   .++++++++|+.+.++...    .+............+         ...++
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~----~~~~~~~~~~~~~~p---------~~~~~  212 (247)
T 1uzm_A          146 GIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR----ALDERIQQGALQFIP---------AKRVG  212 (247)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----HSCHHHHHHHGGGCT---------TCSCB
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh----hcCHHHHHHHHhcCC---------CCCCc
Confidence            1223467999999999999988876   4799999999999765311    000111111211111         12478


Q ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      +++|+|+++++++....    +..+++.+|..
T Consensus       213 ~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          213 TPAEVAGVVSFLASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence            99999999999997542    44678877644

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.87  E-value=8.1e-21  Score=156.56  Aligned_cols=217  Identities=11%  Similarity=-0.026  Sum_probs=155.4

Q ss_pred             ccCCCEEEEEcCCch--hHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCccc--------
Q 022414           29 FQSNMRILVTGGAGF--IGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL--------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~--iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~--------   95 (297)
                      ...+|+++||||+|+  ||+++++.|+++| ++|++++|+... .+...+.   ....++.++++|+++...        
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAG-ARLIFTYAGERL-EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTT-CEEEEEESSGGG-HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCC-CEEEEecCchHH-HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            456899999999988  9999999999999 999999986422 2222222   222368899999998731        


Q ss_pred             ----CCcCEEEEccCCCCC----c----ccccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCC
Q 022414           96 ----IEVDQIYHLACPASP----I----FYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        96 ----~~~d~vi~~a~~~~~----~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~  160 (297)
                          .++|++||+||....    .    ...+++...+++|+.++..+++++...-   .++|++||...+.        
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~--------  153 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL--------  153 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS--------
T ss_pred             HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc--------
Confidence                268999999997652    1    1233456678999999999999997653   3899999987652        


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                              +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++......  ........+....++     
T Consensus       154 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~-----  218 (266)
T 3oig_A          154 --------VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS--DFNSILKDIEERAPL-----  218 (266)
T ss_dssp             --------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT--THHHHHHHHHHHSTT-----
T ss_pred             --------cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc--chHHHHHHHHhcCCC-----
Confidence                    23344679999999999999888763   799999999999886532211  112222333222221     


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                          ..+.+++|+|+++++++....    +..+++.+|-..
T Consensus       219 ----~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          219 ----RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             ----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ----CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence                135789999999999998643    446788776443

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.87  E-value=3.3e-20  Score=148.56  Aligned_cols=210  Identities=17%  Similarity=0.142  Sum_probs=152.2

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQ  100 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~  100 (297)
                      ...+|+++||||++.||+++++.|.+.| .+|++.+|+.....+     .....+..+++|+++..        +.++|+
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~G-a~Vv~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELG-AEVVALGLDADGVHA-----PRHPRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSTTSTTS-----CCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHhh-----hhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            3479999999999999999999999999 999999996543322     12347888999999863        347999


Q ss_pred             EEEccCCCCCcc--cccChhhhHHHhHHHHHHHHHHHH----HcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (297)
Q Consensus       101 vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~  174 (297)
                      +|||||...+..  ..++++..+++|+.++..+.+++.    +.+-++|++||....                .+.....
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~----------------~~~~~~~  145 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYST----------------FGSADRP  145 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGT----------------SCCSSCH
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecccc----------------CCCCCCH
Confidence            999999765432  234567788999999988887763    344589999998754                1223346


Q ss_pred             hHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  251 (297)
                      .|..+|.....+.+.++.+   .+++++.+.||.+..|........  ....+.+.+..++.         .+..++|+|
T Consensus       146 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~--~~~~~~~~~~~Plg---------R~g~peeiA  214 (242)
T 4b79_A          146 AYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD--VEATRRIMQRTPLA---------RWGEAPEVA  214 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC--HHHHHHHHHTCTTC---------SCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC--HHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            7999999999999988876   479999999999987753211110  12333344443331         366889999


Q ss_pred             HHHHHHHhcCC---Cc-cEEecCC
Q 022414          252 DGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       252 ~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +++++++....   .| .+.+.+|
T Consensus       215 ~~v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          215 SAAAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhcCccCceEEECcc
Confidence            99999997654   44 5666665

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.87  E-value=7.7e-21  Score=156.97  Aligned_cols=218  Identities=16%  Similarity=0.064  Sum_probs=153.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|+++++......+.+...+  ...++.++++|+++...           
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLG-AKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 999988775433222222221  12468899999998632           


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                       .++|++|||||......    ..+++...+++|+.++..+++++.+.-   -++|++||.....               
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  158 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD---------------  158 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT---------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc---------------
Confidence             26999999999765433    334567789999999999999997753   3899999975211               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC-------Chh-HHHHHHHHHHcCCCeEEec
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID-------DGR-VVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~  236 (297)
                      .+..+...|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.....       ... .............++    
T Consensus       159 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----  234 (270)
T 3is3_A          159 FSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL----  234 (270)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT----
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC----
Confidence            13334567999999999999998876   479999999999988753100       000 011112222222221    


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                           ..+.+++|+|+++++++....    +..+++.+|
T Consensus       235 -----~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  268 (270)
T 3is3_A          235 -----HRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG  268 (270)
T ss_dssp             -----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence                 246789999999999997543    446777765

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.87  E-value=9.7e-21  Score=153.21  Aligned_cols=193  Identities=13%  Similarity=0.054  Sum_probs=141.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc------------CC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      +|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.  ...++.++++|+++...            .+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDG-YALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            6889999999999999999999999 999999996533222222111  13478899999998621            26


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      +|++||+||......    ..+++...+++|+.++..+++++.+    .+.++|++||...+.                +
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~----------------~  144 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSAR----------------L  144 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS----------------C
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcc----------------c
Confidence            999999999765433    3445667889999999999988854    345777777665431                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH-hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHH
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ-HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  248 (297)
                      ......|+.+|.+.+.+.+.+..+ .+++++.++||.+..+......             .        ......++.++
T Consensus       145 ~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~-------------~--------~~~~~~~~~p~  203 (235)
T 3l77_A          145 IPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP-------------G--------KPKEKGYLKPD  203 (235)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS-------------C--------CCGGGTCBCHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC-------------C--------cccccCCCCHH
Confidence            223357999999999999887544 4799999999998776422110             0        00111467899


Q ss_pred             HHHHHHHHHHhcCC
Q 022414          249 DMVDGLIRLMEGEN  262 (297)
Q Consensus       249 Dva~~~~~~~~~~~  262 (297)
                      |+|+++++++..+.
T Consensus       204 dva~~v~~l~~~~~  217 (235)
T 3l77_A          204 EIAEAVRCLLKLPK  217 (235)
T ss_dssp             HHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHcCCC
Confidence            99999999999876

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=1e-21  Score=162.39  Aligned_cols=198  Identities=13%  Similarity=0.024  Sum_probs=144.2

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      +...+|+|+||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..++.++.+|+++..            
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLK-SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            34567999999999999999999999999 9999999964322221111111 246889999999863            


Q ss_pred             cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ..++|+|||+||......    ..++....+++|+.++..+++++    ++.+. ++|++||...+.             
T Consensus       106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------------  172 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-------------  172 (272)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-------------
T ss_pred             CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC-------------
Confidence            126999999999765432    22345678899999987777766    44566 899999987653             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh------CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH------GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                         +..+...|+.+|.+.+.+.+.++.+.      ++++++++|+.+.++....   ..                    .
T Consensus       173 ---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~---~~--------------------~  226 (272)
T 1yb1_A          173 ---SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---PS--------------------T  226 (272)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---TH--------------------H
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc---cc--------------------c
Confidence               22234579999999999999888764      7999999999998775211   00                    0


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCCCcc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGENTGP  265 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~~~~  265 (297)
                      ....+++++|+|++++.++..+....
T Consensus       227 ~~~~~~~~~dva~~i~~~~~~~~~~~  252 (272)
T 1yb1_A          227 SLGPTLEPEEVVNRLMHGILTEQKMI  252 (272)
T ss_dssp             HHCCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred             cccCCCCHHHHHHHHHHHHHcCCCEE
Confidence            11246899999999999999875433

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.86  E-value=8.3e-21  Score=154.48  Aligned_cols=203  Identities=17%  Similarity=0.132  Sum_probs=148.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHh-cCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc----------cCCcC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL----------LIEVD   99 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~----------~~~~d   99 (297)
                      .+|+++||||+|+||+++++.|++ .| +.|++.+|.....         ...+.++++|+++..          ..++|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g-~~v~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id   72 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKN-HTVINIDIQQSFS---------AENLKFIKADLTKQQDITNVLDIIKNVSFD   72 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTT-EEEEEEESSCCCC---------CTTEEEEECCTTCHHHHHHHHHHTTTCCEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCC-cEEEEeccccccc---------cccceEEecCcCCHHHHHHHHHHHHhCCCC
Confidence            468899999999999999999999 67 8999988864321         135688999998862          12699


Q ss_pred             EEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (297)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  172 (297)
                      ++|||||......    ..+++...+++|+.++..+++++.+.-   .++|++||...+.                +...
T Consensus        73 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------~~~~  136 (244)
T 4e4y_A           73 GIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI----------------AKPN  136 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC----------------CCTT
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc----------------CCCC
Confidence            9999999765422    234466788999999999999987653   2799999987652                3334


Q ss_pred             CChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHH-----------HHHHHHcCCCeEEecCC
Q 022414          173 RSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSN-----------FIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~  238 (297)
                      ...|+.+|.+.+.+.+.++.+   .+++++.++||.+.++..    ......           .........+       
T Consensus       137 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p-------  205 (244)
T 4e4y_A          137 SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLY----RNLIQKYANNVGISFDEAQKQEEKEFP-------  205 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHH----HHHHHHHHHHHTCCHHHHHHHHHTTST-------
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhh----HHHHHhhhhhcCCCHHHHHHHHhhcCC-------
Confidence            467999999999999988874   479999999999987641    111111           1122222221       


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                        ...+.+++|+|+++++++....    +..+++.+|.
T Consensus       206 --~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          206 --LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             --CCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCc
Confidence              1247789999999999997643    4467777764

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.86  E-value=7.4e-21  Score=160.53  Aligned_cols=218  Identities=13%  Similarity=0.102  Sum_probs=152.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC--------ccchhhh---c--CCCceEEEecccCCccc-
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--------KDNLRKW---I--GHPRFELIRHDVTEPLL-   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--------~~~~~~~---~--~~~~~~~~~~Dl~~~~~-   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+....        .+.+...   +  ....+.++++|+++... 
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G-~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDG-ADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCC-CeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            457899999999999999999999999 9999998863211        1222111   1  12468899999998631 


Q ss_pred             -----------CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCC
Q 022414           96 -----------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDP  154 (297)
Q Consensus        96 -----------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~  154 (297)
                                 .++|++|||||......    ..+++...+++|+.++..+++++.+    .+  .++|++||...+.  
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~--  200 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR--  200 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC--
Confidence                       26999999999765432    3345667889999999999888743    33  3799999987652  


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHH---------
Q 022414          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNF---------  222 (297)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~---------  222 (297)
                                    +......|+.+|.+.+.+.+.++.+.   +++++.++||.+.++....  ......+         
T Consensus       201 --------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~  264 (317)
T 3oec_A          201 --------------GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALN--EKLLKMFLPHLENPTR  264 (317)
T ss_dssp             --------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHC--HHHHHHHCTTCSSCCH
T ss_pred             --------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccc--hhhhhhhhhhccccch
Confidence                          23344679999999999999988773   7999999999998864210  0000000         


Q ss_pred             --HHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          223 --IAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       223 --~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                        ........       ......+++++|+|+++++++....    +..+++.+|..
T Consensus       265 ~~~~~~~~~~-------~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          265 EDAAELFSQL-------TLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             HHHHHHHTTT-------CSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             hHHHHHHhhh-------ccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence              00111111       0111457899999999999997543    44788887644

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.86  E-value=1.4e-21  Score=165.04  Aligned_cols=212  Identities=16%  Similarity=0.070  Sum_probs=139.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+++|+||||+|+||+++++.|+++| ++|++++|+.....+....+   .....+.++.+|+++..            
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G-~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQG-CKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999 99999999754332222211   11126889999999862            


Q ss_pred             cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc-----------CCeEEEEecceeecCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-----------GARILLTSTSEVYGDPLVHPQ  159 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----------~~r~v~~Ss~~~~~~~~~~~~  159 (297)
                      ..++|++||+||......    ..+++...+++|+.++.++++++.+.           +.++|++||...+.       
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~-------  157 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL-------  157 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC-------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc-------
Confidence            136899999999764433    23446678999999999998887542           23799999988753       


Q ss_pred             CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHc---CCCeE
Q 022414          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR---GEPLT  233 (297)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~---~~~~~  233 (297)
                               +......|..+|.+.+.+.+.++.+   .+++++.++||.|.++......  .....+.....   .....
T Consensus       158 ---------~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~~  226 (319)
T 3ioy_A          158 ---------AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDD--IRPDALKGEVKPVDKTAVE  226 (319)
T ss_dssp             ---------CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccc--cCchhhcccccchhHHHHH
Confidence                     2223467999999888888777654   4799999999999887532211  11111110000   00000


Q ss_pred             EecCCceeEeeeeHHHHHHHHHHHHhcCC
Q 022414          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       234 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      ...  ......++++|+|+.++.+++.+.
T Consensus       227 ~~~--~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          227 RLA--GVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             --C--CGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHH--HhhhcCCCHHHHHHHHHHHHHcCC
Confidence            000  000112799999999999999863

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.86  E-value=8.7e-21  Score=158.01  Aligned_cols=219  Identities=17%  Similarity=0.109  Sum_probs=154.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC------------ccchhh---hc--CCCceEEEecccC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS------------KDNLRK---WI--GHPRFELIRHDVT   91 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~------------~~~~~~---~~--~~~~~~~~~~Dl~   91 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+....            .+.+..   .+  ...++.++++|++
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEG-ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            3468999999999999999999999999 9999999863211            122211   11  1246889999999


Q ss_pred             Cccc------------CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecc
Q 022414           92 EPLL------------IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTS  148 (297)
Q Consensus        92 ~~~~------------~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~  148 (297)
                      +...            .++|++|||||......     ..+++...+++|+.++..+++++.+    .+  .++|++||.
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV  166 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence            8621            26999999999765432     2345667899999999999988744    23  389999998


Q ss_pred             eeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHH---
Q 022414          149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNF---  222 (297)
Q Consensus       149 ~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~---  222 (297)
                      ..+.                +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.....  .....+   
T Consensus       167 ~~~~----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~  228 (286)
T 3uve_A          167 GGLK----------------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNE--GTFKMFRPD  228 (286)
T ss_dssp             GGTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSH--HHHHHHCTT
T ss_pred             hhcc----------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccccc--chhhhcccc
Confidence            7652                3334467999999999999988876   479999999999998764211  110000   


Q ss_pred             --------HHHH-HcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          223 --------IAQA-IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       223 --------~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                              .... .....+       . ..+.+++|+|+++++++....    +..+++.+|..+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~-------p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          229 LENPGPDDMAPICQMFHTL-------P-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SSSCCHHHHHHHHHTTCSS-------S-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccccchhhHHHHHHhhhcc-------C-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence                    0000 011111       1 357899999999999997653    447888877543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.86  E-value=6e-21  Score=158.62  Aligned_cols=217  Identities=19%  Similarity=0.146  Sum_probs=154.6

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----------cC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----------LI   96 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----------~~   96 (297)
                      +...+++++||||+|+||+++++.|+++| ++|++++|+.....+.... + ..++.++++|+++..           ..
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G-~~Vi~~~r~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADG-LGVVIADLAAEKGKALADE-L-GNRAEFVSTNVTSEDSVLAAIEAANQLG  102 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-H-CTTEEEEECCTTCHHHHHHHHHHHTTSS
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHH-h-CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            44568999999999999999999999999 9999999964332222222 2 247899999999862           12


Q ss_pred             CcCEEEEc-cCCCCCcc---------cccChhhhHHHhHHHHHHHHHHHHH----------cCC-eEEEEecceeecCCC
Q 022414           97 EVDQIYHL-ACPASPIF---------YKYNPVKTIKTNVIGTLNMLGLAKR----------VGA-RILLTSTSEVYGDPL  155 (297)
Q Consensus        97 ~~d~vi~~-a~~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~----------~~~-r~v~~Ss~~~~~~~~  155 (297)
                      ++|++||+ |+......         ..+++...+++|+.++.++++++..          .+. ++|++||...+.   
T Consensus       103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  179 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE---  179 (281)
T ss_dssp             EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS---
T ss_pred             CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC---
Confidence            68999999 54432211         1233577889999999999988753          123 899999987652   


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCe
Q 022414          156 VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL  232 (297)
Q Consensus       156 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  232 (297)
                                   +......|+.+|.+.+.+.+.++.+.   +++++.++||.+..+....    .............+.
T Consensus       180 -------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~  242 (281)
T 3ppi_A          180 -------------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES----VGEEALAKFAANIPF  242 (281)
T ss_dssp             -------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT----TCHHHHHHHHHTCCS
T ss_pred             -------------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc----ccHHHHHHHHhcCCC
Confidence                         33345679999999999998888764   7999999999997653211    112222333333221


Q ss_pred             EEecCCceeEeeeeHHHHHHHHHHHHhcCC--CccEEecCCCccc
Q 022414          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFT  275 (297)
Q Consensus       233 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s  275 (297)
                      .        ..+.+++|+|+++++++..+.  +..+++.+|..++
T Consensus       243 ~--------~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          243 P--------KRLGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             S--------SSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             C--------CCCCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            0        247799999999999998765  4467888876654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.86  E-value=3.2e-21  Score=155.93  Aligned_cols=191  Identities=14%  Similarity=0.061  Sum_probs=139.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CCc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~~   98 (297)
                      .+|+++||||+|+||+++++.|+++| ++|++++|+.....+.. ..+. .++.++.+|+++...            .++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERG-HQVSMMGRRYQRLQQQE-LLLG-NAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHH-HHHG-GGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHH-HHhc-CCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            36899999999999999999999999 99999999653322222 2222 268899999998621            268


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      |++||+||......    ..+++...+++|+.++..+++++.+    .+.++|++||...+.                +.
T Consensus        79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~----------------~~  142 (235)
T 3l6e_A           79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV----------------GK  142 (235)
T ss_dssp             SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS----------------SC
T ss_pred             cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC----------------CC
Confidence            99999999754322    3345677899999999999888843    223899999987642                22


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      .....|+.+|.+.+.+.+.++.+   .+++++.++||.+..+.....             ..         .....+..+
T Consensus       143 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-------------~~---------~~~~~~~~p  200 (235)
T 3l6e_A          143 ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT-------------DH---------VDPSGFMTP  200 (235)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------------CBCH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc-------------CC---------CCCcCCCCH
Confidence            33467999999999999998876   369999999999977642110             00         001257899


Q ss_pred             HHHHHHHHHHHhcCC
Q 022414          248 SDMVDGLIRLMEGEN  262 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~  262 (297)
                      +|+|+++++++..+.
T Consensus       201 edvA~~v~~l~~~~~  215 (235)
T 3l6e_A          201 EDAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHHHHHHTCCCS
T ss_pred             HHHHHHHHHHHhCCC
Confidence            999999999998765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.86  E-value=4e-21  Score=158.61  Aligned_cols=200  Identities=17%  Similarity=0.145  Sum_probs=137.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+.... +. .++.++++|+++...            .+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~-~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  102 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAG-YGVALAGRRLDALQETAAE-IG-DDALCVPTDVTDPDSVRALFTATVEKFGR  102 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-HT-SCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHH-hC-CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999 9999999964332222222 22 468899999998621            27


Q ss_pred             cCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHH----cC---CeEEEEecceeecCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----VG---ARILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      +|++|||||......     ..+++...+++|+.++..+++++.+    .+   .++|++||...+              
T Consensus       103 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~--------------  168 (272)
T 4dyv_A          103 VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT--------------  168 (272)
T ss_dssp             CCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT--------------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc--------------
Confidence            999999999754321     2344667899999998888877643    33   389999998764              


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        .+..+...|+.+|.+.+.+.+.++.+   .++++..++||.+..+....    +.....    .    .  .......
T Consensus       169 --~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~----~----~--~~~~~~~  232 (272)
T 4dyv_A          169 --SPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK----MKAGVP----Q----A--DLSIKVE  232 (272)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh----hcccch----h----h--hhccccc
Confidence              23334567999999999999988876   47999999999998764211    100000    0    0  0011223


Q ss_pred             eeeeHHHHHHHHHHHHhcCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~  262 (297)
                      .++.++|+|+++++++..+.
T Consensus       233 ~~~~pedvA~~v~fL~s~~~  252 (272)
T 4dyv_A          233 PVMDVAHVASAVVYMASLPL  252 (272)
T ss_dssp             ---CHHHHHHHHHHHHHSCT
T ss_pred             CCCCHHHHHHHHHHHhCCCC
Confidence            57899999999999999876

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=2.1e-21  Score=161.24  Aligned_cols=205  Identities=15%  Similarity=0.050  Sum_probs=141.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCccc-----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.   ....+.++.+|+++...           
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQG-LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            467999999999999999999999999 999999996432221111111   11357888999998632           


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHH----HHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIG----TLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                       .++|+|||+||......    ..+++...+++|+.+    ++.++..+++.+   .++|++||...+..          
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~----------  178 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV----------  178 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC----------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc----------
Confidence             26999999999764332    234456788999999    666777777776   48999999876531          


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                          .+..+...|+.+|.+.+.+.+.++.+     .+++++.++|+.+.++...    .............         
T Consensus       179 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~---------  241 (279)
T 1xg5_A          179 ----LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF----KLHDKDPEKAAAT---------  241 (279)
T ss_dssp             ----CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH----HHTTTCHHHHHHH---------
T ss_pred             ----CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh----hhcccChhHHhhh---------
Confidence                12334467999999999998887754     3699999999999876410    0000000000000         


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      .....+++++|+|+++++++..+.
T Consensus       242 ~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          242 YEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             HC---CBCHHHHHHHHHHHHHSCT
T ss_pred             cccccCCCHHHHHHHHHHHhcCCc
Confidence            011246899999999999998765

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=4.4e-21  Score=158.34  Aligned_cols=221  Identities=17%  Similarity=0.120  Sum_probs=151.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+..... .+...+  .++.++++|+++...            .+
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSG-ARVVICDKDESGGR-ALEQEL--PGAVFILCDVTQEDDVKTLVSETIRRFGR   82 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHHC--TTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHh--cCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 99999998643221 111122  247889999998631            26


Q ss_pred             cCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++|||||......     ..+++...+++|+.++..+++++.+    .+.++|++||...+.                
T Consensus        83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------  146 (270)
T 1yde_A           83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI----------------  146 (270)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH----------------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccC----------------
Confidence            999999999754211     2234567889999999999988853    345899999976532                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCC---CChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNI---DDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                      +......|+.+|.+.+.+.+.++.+   .++++++++|+.++++....   ...... ..+.......++         .
T Consensus       147 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~p~---------~  216 (270)
T 1yde_A          147 GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPR-ASIREGMLAQPL---------G  216 (270)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHH-HHHHHHHHTSTT---------S
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchH-HHHHHHhhcCCC---------C
Confidence            1122357999999999999988865   57999999999999864110   000000 011111111111         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---CccEEecCCCcccHHHHH
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TGPINIGNPGEFTMLELA  280 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s~~e~~  280 (297)
                      .+..++|+|+++++++....   +..+.+.+|..+.+....
T Consensus       217 r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~~~  257 (270)
T 1yde_A          217 RMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGCKA  257 (270)
T ss_dssp             SCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC----
T ss_pred             CCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCcCc
Confidence            36789999999999987633   447888888766654443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.86  E-value=6.2e-21  Score=153.86  Aligned_cols=191  Identities=12%  Similarity=0.022  Sum_probs=135.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc---------CCcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---------~~~d~vi  102 (297)
                      ||+++||||+|+||+++++.|+++| ++|++++|+.....+.... + ..++.++.+|+++...         ...|++|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv   77 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEG-KATYLTGRSESKLSTVTNC-L-SNNVGYRARDLASHQEVEQLFEQLDSIPSTVV   77 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHT-C-SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH-H-hhccCeEeecCCCHHHHHHHHHHHhhcCCEEE
Confidence            4679999999999999999999999 9999999964332222111 2 2467889999998621         2359999


Q ss_pred             EccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc----CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC
Q 022414          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (297)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~  174 (297)
                      |+||......    ..+++...+++|+.++..+++++.+.    +.++|++||...+.                +.....
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~----------------~~~~~~  141 (230)
T 3guy_A           78 HSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ----------------PKAQES  141 (230)
T ss_dssp             ECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS----------------CCTTCH
T ss_pred             EeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC----------------CCCCCc
Confidence            9999765433    23445678899999999999888553    33899999987652                333446


Q ss_pred             hHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  251 (297)
                      .|+.+|.+.+.+.+.++.+.   ++++..++||.+..+....            ..  .       ......+.+++|+|
T Consensus       142 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------------~~--~-------~~~~~~~~~~~dvA  200 (230)
T 3guy_A          142 TYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET------------SG--K-------SLDTSSFMSAEDAA  200 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------------------CCCHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh------------cC--C-------CCCcccCCCHHHHH
Confidence            79999999999999998774   7999999999887653110            00  0       01124578999999


Q ss_pred             HHHHHHHhcCC
Q 022414          252 DGLIRLMEGEN  262 (297)
Q Consensus       252 ~~~~~~~~~~~  262 (297)
                      ++++.++..+.
T Consensus       201 ~~i~~l~~~~~  211 (230)
T 3guy_A          201 LMIHGALANIG  211 (230)
T ss_dssp             HHHHHHCCEET
T ss_pred             HHHHHHHhCcC
Confidence            99999998665

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.86  E-value=7.4e-21  Score=156.21  Aligned_cols=202  Identities=13%  Similarity=0.056  Sum_probs=139.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      .++|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ....+.++.+|+++...            .
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAG-AKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999 999999996433222211111 12467888999998621            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|++|||||......    ..+++...+++|+.++..+++++.    +.+. ++|++||...+.               
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~---------------  145 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS---------------  145 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC---------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc---------------
Confidence            6999999999765433    234466788999999988887773    3455 899999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh-CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                       +......|+.+|.+.+.+.+.++.+. +++++.++||.+..+....    ..    .    ........  .....++.
T Consensus       146 -~~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~----~~----~----~~~~~~~~--~~~~~~~~  210 (264)
T 3tfo_A          146 -VVPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT----IT----H----EETMAAMD--TYRAIALQ  210 (264)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------------------CCC
T ss_pred             -cCCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc----cc----c----hhHHHHHH--hhhccCCC
Confidence             23344679999999999999888774 7999999999987764211    00    0    00000000  01112478


Q ss_pred             HHHHHHHHHHHHhcCC
Q 022414          247 VSDMVDGLIRLMEGEN  262 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~  262 (297)
                      ++|+|++++++++.+.
T Consensus       211 pedvA~~v~~l~s~~~  226 (264)
T 3tfo_A          211 PADIARAVRQVIEAPQ  226 (264)
T ss_dssp             HHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHhcCCc
Confidence            9999999999999876

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.86  E-value=5.5e-21  Score=156.25  Aligned_cols=211  Identities=15%  Similarity=0.059  Sum_probs=147.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEeccc--CCcc----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDV--TEPL----------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl--~~~~----------   94 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.  ....+.++.+|+  ++..          
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYG-ATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999 999999996433222111111  123678889999  5542          


Q ss_pred             --cCCcCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                        ..++|++|||||.....     ...+++...+++|+.++..+++++    ++.+. ++|++||...+.          
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------  157 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ----------  157 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS----------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc----------
Confidence              12699999999974321     123345678899999999999988    44554 899999987642          


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHhC--CcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                            +......|+.+|.+.+.+.+.++.+..  ++++.+.||.+..+.            .........         
T Consensus       158 ------~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~------------~~~~~~~~~---------  210 (252)
T 3f1l_A          158 ------GRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM------------RASAFPTED---------  210 (252)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH------------HHHHCTTCC---------
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch------------hhhhCCccc---------
Confidence                  233446799999999999999988753  889999998886532            111111111         


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccHH
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTML  277 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~  277 (297)
                      ...+..++|+|+++++++....    +..+++.+|...++.
T Consensus       211 ~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          211 PQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             GGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred             hhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            1236789999999999998653    447888887765544

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=5.1e-21  Score=157.34  Aligned_cols=213  Identities=18%  Similarity=0.142  Sum_probs=152.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+ ..+.+. .++.++.+|+++...            .+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREG-ASLVAVDREERLLAE-AVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGR   80 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999 999999996432221 111121 468889999998631            25


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      +|++|||||......    ..++.+..+++|+.++..+++++.+.   +.++|++||...++.                 
T Consensus        81 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------------  143 (263)
T 2a4k_A           81 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-----------------  143 (263)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-----------------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC-----------------
Confidence            899999999764322    22345667899999999999998764   348999999876521                 


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      .....|+.+|.+.+.+.+.++.+   .++++++++||.+.++......    ......+....++         ..+.++
T Consensus       144 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~p~---------~~~~~p  210 (263)
T 2a4k_A          144 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP----PWAWEQEVGASPL---------GRAGRP  210 (263)
T ss_dssp             HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC----HHHHHHHHHTSTT---------CSCBCH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC----HHHHHHHHhcCCC---------CCCcCH
Confidence            12356999999999999888766   3799999999999987532211    1222222222221         136799


Q ss_pred             HHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          248 SDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                      +|+|+++++++..+.    +..+++.+|..+.
T Consensus       211 ~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~  242 (263)
T 2a4k_A          211 EEVAQAALFLLSEESAYITGQALYVDGGRSIV  242 (263)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTTTC
T ss_pred             HHHHHHHHHHhCccccCCcCCEEEECCCcccc
Confidence            999999999997643    4467787775543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.86  E-value=2.7e-20  Score=153.47  Aligned_cols=220  Identities=9%  Similarity=-0.009  Sum_probs=156.8

Q ss_pred             cccccCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhhcC--CCceEEEecccCCcc------
Q 022414           26 SKFFQSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG--HPRFELIRHDVTEPL------   94 (297)
Q Consensus        26 ~~~~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~Dl~~~~------   94 (297)
                      ..+...+|+++||||+  |+||+++++.|+++| ++|++++|+.... .+....+..  ..++.++++|+++..      
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~   92 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMG-AAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLV   92 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTS-CEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCC-CeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHH
Confidence            3455678999999999  999999999999999 9999998875443 222222211  347888999999862      


Q ss_pred             ------cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCC
Q 022414           95 ------LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQ  159 (297)
Q Consensus        95 ------~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~  159 (297)
                            ..++|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+...     
T Consensus        93 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  167 (267)
T 3gdg_A           93 KDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN-----  167 (267)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC-----
Confidence                  236899999999765432    23446678999999999999888    44554 89999997754211     


Q ss_pred             CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHhC--CcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC
Q 022414          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                               ...+...|+.+|.+.+.+.+.++.+..  ++++.+.||.+..+......    ......+....+.     
T Consensus       168 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~-----  229 (267)
T 3gdg_A          168 ---------FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP----KETQQLWHSMIPM-----  229 (267)
T ss_dssp             ---------SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC----HHHHHHHHTTSTT-----
T ss_pred             ---------CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC----HHHHHHHHhcCCC-----
Confidence                     112346799999999999999987753  78999999999876532211    1222222222221     


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                          ..+.+++|+|+++++++....    +..+++.+|..
T Consensus       230 ----~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          230 ----GRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             ----SSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             ----CCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence                246789999999999997643    44678877643

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.86  E-value=2.8e-20  Score=157.60  Aligned_cols=213  Identities=12%  Similarity=0.022  Sum_probs=150.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEe-cCCCCCccchhhhc--CCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD-NYFTGSKDNLRKWI--GHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++ |+.....+....+.  ....+.++.+|+++..            
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G-~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEG-YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            457899999999999999999999999 9999998 75432221111111  1246889999999865            


Q ss_pred             -----c------------CCcCEEEEccCCCCCccc------------------ccChhhhHHHhHHHHHHHHHHHH---
Q 022414           95 -----L------------IEVDQIYHLACPASPIFY------------------KYNPVKTIKTNVIGTLNMLGLAK---  136 (297)
Q Consensus        95 -----~------------~~~d~vi~~a~~~~~~~~------------------~~~~~~~~~~n~~~~~~l~~~~~---  136 (297)
                           .            .++|++|||||.......                  .+++...+++|+.++..+++++.   
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  202 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  202 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 2            168999999997643221                  33455678999999999888875   


Q ss_pred             -HcC------C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeecc
Q 022414          137 -RVG------A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFN  205 (297)
Q Consensus       137 -~~~------~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~  205 (297)
                       +.+      . ++|++||...+.                +......|+.+|.+.+.+.+.++.+.   +++++.++||.
T Consensus       203 ~~~~~~~~~~~g~IV~isS~~~~~----------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~  266 (328)
T 2qhx_A          203 AGTPAKHRGTNYSIINMVDAMTNQ----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL  266 (328)
T ss_dssp             HHSCGGGSCSCEEEEEECCTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred             HhcCCcCCCCCcEEEEECchhhcc----------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCc
Confidence             334      4 899999987642                22334679999999999999888764   79999999999


Q ss_pred             ccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       206 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      +.++. .. .    +.....+....++   +     ..+..++|+|+++++++....    +..+++.+|..
T Consensus       267 v~T~~-~~-~----~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          267 SVLVD-DM-P----PAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             BSCCC-CS-C----HHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccCCc-cc-c----HHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            99876 21 1    2222223322221   0     036789999999999997532    34677777643

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.86  E-value=1.6e-20  Score=156.58  Aligned_cols=212  Identities=19%  Similarity=0.131  Sum_probs=148.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC-CCCccchhhh--cCCCceEEEecccCC----cc--------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKW--IGHPRFELIRHDVTE----PL--------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~~~~~--~~~~~~~~~~~Dl~~----~~--------   94 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+. ....+....+  .....+.++.+|+++    ..        
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTG-YRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence            457999999999999999999999999 9999999965 2211111111  112468899999998    42        


Q ss_pred             ----cCCcCEEEEccCCCCCccc--------------ccChhhhHHHhHHHHHHHHHHHHHc----C------C-eEEEE
Q 022414           95 ----LIEVDQIYHLACPASPIFY--------------KYNPVKTIKTNVIGTLNMLGLAKRV----G------A-RILLT  145 (297)
Q Consensus        95 ----~~~~d~vi~~a~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~----~------~-r~v~~  145 (297)
                          ..++|++|||||.......              .+++...+++|+.++..+++++.+.    +      . ++|++
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  179 (288)
T 2x9g_A          100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL  179 (288)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence                1269999999997543222              2335567899999999998887542    2      3 89999


Q ss_pred             ecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHH
Q 022414          146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNF  222 (297)
Q Consensus       146 Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~  222 (297)
                      ||...+.                +......|+.+|.+.+.+.+.++.+.   +++++.++||.++++. .. ..    ..
T Consensus       180 sS~~~~~----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~-~~----~~  237 (288)
T 2x9g_A          180 CDAMVDQ----------------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM-GE----EE  237 (288)
T ss_dssp             CCTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS-CH----HH
T ss_pred             ecccccC----------------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc-Ch----HH
Confidence            9987642                23344679999999999999888763   7999999999999886 21 11    11


Q ss_pred             HHHHHcCCCeEEecCCceeEee-eeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          223 IAQAIRGEPLTVQAPGTQTRSF-CYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~-i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                      ...+....++         ..+ ..++|+|+++++++....   .| .+++.+|..
T Consensus       238 ~~~~~~~~p~---------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          238 KDKWRRKVPL---------GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             HHHHHHTCTT---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhhCCC---------CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence            2222222211         124 689999999999997643   44 566766543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.86  E-value=3e-20  Score=150.50  Aligned_cols=216  Identities=13%  Similarity=0.027  Sum_probs=152.6

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      ++.++|+++||||++.||+++++.|.++| .+|++.+|+.....+...++.. ..++..+++|+++..            
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~G-a~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALND-SIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35679999999999999999999999999 9999999965433222222211 246888999999872            


Q ss_pred             cCCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      +.++|++|||||......     ..++++..+++|+.++..+++++    ++++- ++|++||...+.            
T Consensus        82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~------------  149 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR------------  149 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC------------
T ss_pred             cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC------------
Confidence            236999999999654211     23457778999999998887777    34555 899999987541            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC--hh-HHHHHHHHHHcCCCeEEecCC
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD--GR-VVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~  238 (297)
                          +......|..+|.....+.+.++.+   ++++++.+.||.+-.|......  .. ....+....   .++      
T Consensus       150 ----~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~---~~~------  216 (254)
T 4fn4_A          150 ----GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLM---SLS------  216 (254)
T ss_dssp             ----SSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHH---TTC------
T ss_pred             ----CCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcC---CCC------
Confidence                2233467999999999999988876   4799999999999776432211  11 111222111   111      


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                         ..+..++|+|+++++++....    +..+.+.+|-
T Consensus       217 ---~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          217 ---SRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             ---CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ---CCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence               135678999999999997654    4467777653

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.86  E-value=4.2e-20  Score=150.55  Aligned_cols=204  Identities=12%  Similarity=0.049  Sum_probs=143.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+. ...++.++++|+++...            .
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEG-AAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 999999996432221111111 12468889999998621            2


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      ++|++|||||......    ..+++...+++|+.++..+++++.+    .+.++|++||...+.                
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  147 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRV----------------  147 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTC----------------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcC----------------
Confidence            6999999999764322    2334567789999999999888743    335899999987642                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++..................  .        .  ..++
T Consensus       148 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~--------~--~~~~  215 (247)
T 2jah_A          148 NVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRI--S--------Q--IRKL  215 (247)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT--T--------T--SCCB
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcc--c--------c--cCCC
Confidence            2233467999999999999888765   4899999999999887532111111111111110  0        0  1147


Q ss_pred             eHHHHHHHHHHHHhcCC
Q 022414          246 YVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~  262 (297)
                      +++|+|+++++++..+.
T Consensus       216 ~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          216 QAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             CHHHHHHHHHHHHHSCT
T ss_pred             CHHHHHHHHHHHhCCCc
Confidence            89999999999998764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.86  E-value=3.2e-21  Score=157.35  Aligned_cols=196  Identities=15%  Similarity=0.056  Sum_probs=140.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---c-CCCceEEEecccCCccc---------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---I-GHPRFELIRHDVTEPLL---------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~Dl~~~~~---------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+   . ...++.++.+|+++...         
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDG-YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHT-CEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            4567999999999999999999999999 99999999653322222211   1 11568899999998621         


Q ss_pred             ---CCcCEEEEccCCCCCccc---ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           96 ---IEVDQIYHLACPASPIFY---KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 ---~~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                         .++|++|||||.......   .+++...+++|+.++..+++++    ++.+. ++|++||...+.            
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------  150 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY------------  150 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC------------
Confidence               269999999997543322   2445678899999999998887    44555 899999987642            


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                          +..+...|+.+|.+.+.+.+.++.+.   +++++.++||.+..+.            .....  ...       ..
T Consensus       151 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~------------~~~~~--~~~-------~~  205 (250)
T 3nyw_A          151 ----GFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM------------AKKAG--TPF-------KD  205 (250)
T ss_dssp             ------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH------------HHHTT--CCS-------CG
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch------------hhhcC--CCc-------cc
Confidence                22235789999999999999888763   7999999999886532            11111  111       11


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      ..+++++|+|+++++++..+.
T Consensus       206 ~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          206 EEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             GGSBCHHHHHHHHHHHHTSCT
T ss_pred             ccCCCHHHHHHHHHHHHcCCC
Confidence            247899999999999999765

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.85  E-value=2.2e-21  Score=159.16  Aligned_cols=216  Identities=12%  Similarity=0.041  Sum_probs=137.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------c-CCcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------L-IEVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~-~~~d~vi  102 (297)
                      +|+|+||||+|+||+++++.|+++| ++|++++|+......           . +.+|+++..        . .++|++|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~-----------~-~~~Dl~~~~~v~~~~~~~~~~id~lv   67 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAG-HQIVGIDIRDAEVIA-----------D-LSTAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSSSSEEC-----------C-TTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCchhhcc-----------c-cccCCCCHHHHHHHHHHhCCCCCEEE
Confidence            4689999999999999999999999 999999996532211           1 456776541        2 3679999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCC------------
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWG------------  165 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~------------  165 (297)
                      ||||....   ...++..+++|+.++..+++++.    +.+. ++|++||...+......+..+..+.            
T Consensus        68 ~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (257)
T 1fjh_A           68 LCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             ECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             ECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhh
Confidence            99997541   24478899999999999998885    3454 8999999987632111110000000            


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                      ...+..+...|+.+|.+.+.+.+.++.+   .+++++.++||.+.++.....   ............  +     .....
T Consensus       145 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~--~-----~~~~~  214 (257)
T 1fjh_A          145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG---LQDPRYGESIAK--F-----VPPMG  214 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------------------------C-----CCSTT
T ss_pred             cccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh---ccchhHHHHHHh--c-----ccccC
Confidence            0012223467999999999999887765   489999999999988753110   000010111100  0     00111


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                      .+++++|+|+++++++..+.   .| .+++.+|..
T Consensus       215 ~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~  249 (257)
T 1fjh_A          215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            47899999999999998653   44 566776543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=1.5e-20  Score=152.27  Aligned_cols=195  Identities=17%  Similarity=0.158  Sum_probs=141.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc--------------C
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------------I   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~--------------~   96 (297)
                      .+|+++||||+|+||+++++.|+++| ++|++++|+.....         ....++.+|+++...              .
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNG-YTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecCccccc---------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999 99999999754321         135667889887521              3


Q ss_pred             CcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      ++|++||+||......     ..+++...+++|+.++..+++++.+.   +.++|++||...+.                
T Consensus        72 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------------  135 (236)
T 1ooe_A           72 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG----------------  135 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc----------------
Confidence            7999999999754322     23446678899999999999998764   23899999987652                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHh-----CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      +..+...|+.+|.+.+.+.+.++.+.     +++++.++|+.+.++.        .    ........         ...
T Consensus       136 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~--------~----~~~~~~~~---------~~~  194 (236)
T 1ooe_A          136 PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM--------N----RKWMPNAD---------HSS  194 (236)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH--------H----HHHSTTCC---------GGG
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc--------h----hhcCCCcc---------ccc
Confidence            23345679999999999999988664     4999999999887652        1    11111110         123


Q ss_pred             eeeHHHHHHHHHHHHhcCC-----CccEEecCCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN-----TGPINIGNPG  272 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~-----~~~~~i~~~~  272 (297)
                      +++.+|+|++++.++..+.     +..+.+.++.
T Consensus       195 ~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          195 WTPLSFISEHLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             CBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             cCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence            5678999999997773321     3355665543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.85  E-value=8.9e-21  Score=157.34  Aligned_cols=203  Identities=14%  Similarity=0.053  Sum_probs=140.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc-----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL-----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~-----------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.  ....+.++++|+++...           
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEG-YSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 999999996533222211111  11235889999998632           


Q ss_pred             -CCcCEEEEccCCCCCc-----ccccChhhhHHHhHHHHHHHHHHHH----HcC---CeEEEEecceeecCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAK----RVG---ARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~---~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                       .++|++|||||.....     ...++++..+++|+.++..+++++.    +.+   .++|++||...+           
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~-----------  177 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ-----------  177 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT-----------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC-----------
Confidence             2689999999975431     1234566789999999888877764    333   389999998764           


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                           .+......|+.+|.+.+.+.+.++.+   .+++++.++||.+..+....            ....  ........
T Consensus       178 -----~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~------------~~~~--~~~~~~~~  238 (281)
T 4dry_A          178 -----TPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR------------MSTG--VLQANGEV  238 (281)
T ss_dssp             -----CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------------------CE--EECTTSCE
T ss_pred             -----CCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhh------------hcch--hhhhhhcc
Confidence                 23344577999999999999988876   57999999999987754210            1000  00000011


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      ....++.++|+|+++++++..+.
T Consensus       239 ~~~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          239 AAEPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             EECCCBCHHHHHHHHHHHHHSCT
T ss_pred             cccCCCCHHHHHHHHHHHhCCCc
Confidence            12347899999999999999887

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.85  E-value=6.1e-20  Score=148.02  Aligned_cols=204  Identities=15%  Similarity=0.164  Sum_probs=148.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------cCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ++|+|+||||++.||+++++.|++.| .+|++.+|+...    +.+.. ...++..+++|+++..            +.+
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~G-a~V~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAG-DKVCFIDIDEKR----SADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHH----HHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEeCCHHH----HHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35899999999999999999999999 999999986432    22221 1346888999999862            236


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      +|++|||||......    ..++++..+++|+.++..+.+++.    +.+-++|++||...+.                +
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~----------------~  139 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ----------------S  139 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS----------------C
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc----------------C
Confidence            999999999765433    234567788999999988887773    3445899999987642                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      ......|..+|.....+.+.++.+.  +++++.+.||.+-.+...        .+........++         ..+..+
T Consensus       140 ~~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~--------~~~~~~~~~~Pl---------~R~g~p  202 (247)
T 3ged_A          140 EPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ--------EFTQEDCAAIPA---------GKVGTP  202 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-----------CCHHHHHTSTT---------SSCBCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH--------HHHHHHHhcCCC---------CCCcCH
Confidence            2234679999999999999888764  699999999998765421        111222222222         135688


Q ss_pred             HHHHHHHHHHHhcCC--CccEEecCCC
Q 022414          248 SDMVDGLIRLMEGEN--TGPINIGNPG  272 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~--~~~~~i~~~~  272 (297)
                      +|+|+++++++....  +..+.+.+|-
T Consensus       203 ediA~~v~fL~s~~~iTG~~i~VDGG~  229 (247)
T 3ged_A          203 KDISNMVLFLCQQDFITGETIIVDGGM  229 (247)
T ss_dssp             HHHHHHHHHHHHCSSCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEECcCH
Confidence            999999999998544  4467777663

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.85  E-value=7.7e-20  Score=149.01  Aligned_cols=206  Identities=14%  Similarity=0.115  Sum_probs=140.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCcCE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEVDQ  100 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~d~  100 (297)
                      |+++||||+|+||+++++.|+++| ++|++++|+.....+ +...+. .++.++.+|+++..            ..++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQG-HKVIATGRRQERLQE-LKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHHC-TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            689999999999999999999999 999999986432221 222222 46888999999862            126999


Q ss_pred             EEEccCCCC-Cc----ccccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPAS-PI----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       101 vi~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      +|||||... ..    ...+++...+++|+.++..+++++.    +.+. ++|++||...+.                +.
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------------~~  141 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW----------------PY  141 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------------CC
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc----------------CC
Confidence            999999753 11    1234566788999999998888875    4454 899999987642                22


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccC-CCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYG-PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      .....|+.+|.+.+.+.+.++.+.   +++++.++||.+.| +....   .+...  .....    ...    ....+++
T Consensus       142 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~---~~~~~--~~~~~----~~~----~~~~~~~  208 (248)
T 3asu_A          142 AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV---RFKGD--DGKAE----KTY----QNTVALT  208 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------------CCBC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhh---cccCc--hHHHH----HHH----hccCCCC
Confidence            334679999999999999988763   79999999999984 43110   00000  00000    000    0113468


Q ss_pred             HHHHHHHHHHHHhcCC--C-ccEEecC
Q 022414          247 VSDMVDGLIRLMEGEN--T-GPINIGN  270 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~--~-~~~~i~~  270 (297)
                      ++|+|+++++++..+.  . ..+.+..
T Consensus       209 p~dvA~~v~~l~s~~~~~~g~~i~v~~  235 (248)
T 3asu_A          209 PEDVSEAVWWVSTLPAHVNINTLEMMP  235 (248)
T ss_dssp             HHHHHHHHHHHHHSCTTCCCCEEEECC
T ss_pred             HHHHHHHHHHHhcCCccceeeEEEEcc
Confidence            9999999999998764  3 3455544

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.85  E-value=3.4e-20  Score=152.45  Aligned_cols=211  Identities=17%  Similarity=0.102  Sum_probs=145.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------C
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------~   96 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..++.++.+|+++...            .
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEG-TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            457999999999999999999999999 9999999864322211111111 2368889999998631            2


Q ss_pred             CcCEEEEccCCC-CCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPA-SPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~-~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++|||||.. ....    ..+++...+++|+.++..+++++.+    .+. ++|++||...+.              
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  149 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK--------------  149 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS--------------
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc--------------
Confidence            699999999975 2211    2344667889999999998888754    355 899999987652              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH---------------HH-HHHHHH
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV---------------SN-FIAQAI  227 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~---------------~~-~~~~~~  227 (297)
                        +......|+.+|.+.+.+.+.++.+   .+++++.++||.+..+...    ...               .. ....+.
T Consensus       150 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (262)
T 1zem_A          150 --GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMW----ERQVELQAKVGSQYFSTDPKVVAQQMI  223 (262)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHH----HHHHHHHHHHTCTTSCSSHHHHHHHHH
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhh----hhccchhhhccccccccCHHHHHHHHH
Confidence              2223467999999999999888765   4799999999988765310    000               01 111111


Q ss_pred             cCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecC
Q 022414          228 RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGN  270 (297)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~  270 (297)
                      ...++         ..+..++|+|+++++++....   .| .+.+.+
T Consensus       224 ~~~p~---------~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          224 GSVPM---------RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             HTSTT---------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             hcCCC---------CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence            11111         136789999999999997643   44 455544

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.85  E-value=9.5e-21  Score=156.84  Aligned_cols=203  Identities=15%  Similarity=0.004  Sum_probs=143.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHh-cCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~------------   95 (297)
                      +.+|+|+||||+|+||+++++.|++ .| ++|++++|+.....+....+.. ..++.++.+|+++...            
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSS-SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcC-CeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999999 89 9999999964322222111111 2468889999998621            


Q ss_pred             CCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCC-C----------CC
Q 022414           96 IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDP-L----------VH  157 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~-~----------~~  157 (297)
                      .++|+|||+||.......    .+++...+++|+.++.++++++.+..   .++|++||...+... .          ..
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence            269999999997643222    24456789999999999999997763   289999998765310 0          00


Q ss_pred             CCCCCCCC--------------CCCCCCCCChHHHhHHHHHHHHHHHHHH-------hCCcEEEEeeccccCCCCCCCCh
Q 022414          158 PQDESYWG--------------NVNPIGVRSCYDEGKRVAETLMFDYHRQ-------HGIEIRIARIFNTYGPRMNIDDG  216 (297)
Q Consensus       158 ~~~e~~~~--------------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~ivrp~~v~G~~~~~~~~  216 (297)
                      .++|+.+.              ...+..|...|+.+|.+.+.+++.++.+       .+++++.++||.+.++....   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence            11111000              0011224478999999999999887765       48999999999998764210   


Q ss_pred             hHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          217 RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                                               ..+.+++|+|++++.++..+
T Consensus       238 -------------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 -------------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             -------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             -------------------------cccCChhHhhhhHhhhhcCc
Confidence                                     12579999999999999754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.85  E-value=3.4e-20  Score=154.41  Aligned_cols=202  Identities=11%  Similarity=0.062  Sum_probs=143.3

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh--cCCCceEEEecccCCccc----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~----------   95 (297)
                      ....+|+|+||||+|+||+++++.|+++| ++|++++|+.....+.....  .....+.++.+|+++...          
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMG-AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 99999999643222111111  112368889999998521          


Q ss_pred             --CCcCEEEEc-cCCCCCcc---cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 --IEVDQIYHL-ACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 --~~~d~vi~~-a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                        .++|++||+ +|......   ..++....+++|+.++..+++++.+    .+.++|++||...+.             
T Consensus       103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-------------  169 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV-------------  169 (286)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS-------------
T ss_pred             HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccccc-------------
Confidence              269999999 56543221   2234566789999999999888744    344899999987642             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh-----CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                         +..+...|+.+|.+.+.+.+.+..+.     ++++++++||.+.++.        ..    ....+         ..
T Consensus       170 ---~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~--------~~----~~~~~---------~~  225 (286)
T 1xu9_A          170 ---AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET--------AM----KAVSG---------IV  225 (286)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH--------HH----HHSCG---------GG
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh--------HH----Hhccc---------cc
Confidence               22344679999999999998877654     7999999999886542        11    11111         11


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCCCccEE
Q 022414          241 TRSFCYVSDMVDGLIRLMEGENTGPIN  267 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~~~~~~  267 (297)
                      ...+++++|+|+.++.+++.+..+.|.
T Consensus       226 ~~~~~~~~~vA~~i~~~~~~~~~~~~~  252 (286)
T 1xu9_A          226 HMQAAPKEECALEIIKGGALRQEEVYY  252 (286)
T ss_dssp             GGGCBCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             cCCCCCHHHHHHHHHHHHhcCCceEEe
Confidence            124679999999999999887655443

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.84  E-value=1e-19  Score=150.98  Aligned_cols=217  Identities=14%  Similarity=0.074  Sum_probs=149.4

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+ +.... ..++.++++|+++..            ..
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEG-ARVAVLDKSAERLRE-LEVAH-GGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHT-BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCHHHHHH-HHHHc-CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            3467999999999999999999999999 999999986432222 11112 247889999999862            22


Q ss_pred             CcCEEEEccCCCCCccc---------ccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFY---------KYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      ++|++|||||.......         .++++..+++|+.++..+++++.+    .+.++|++||...+.           
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------  147 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFY-----------  147 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS-----------
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhcc-----------
Confidence            69999999997543211         122556788999999999888744    345899999987642           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhH----HH--HHHHHHHcCCCeEEe
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRV----VS--NFIAQAIRGEPLTVQ  235 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~----~~--~~~~~~~~~~~~~~~  235 (297)
                           +......|+.+|.+.+.+.+.++.+.  .++++.+.||.+..+.........    ..  .....+....++   
T Consensus       148 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---  219 (281)
T 3zv4_A          148 -----PNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI---  219 (281)
T ss_dssp             -----SSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT---
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC---
Confidence                 23334679999999999999988774  399999999999877532110000    00  011222222221   


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHh-cCC----CccEEecCCCc
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLME-GEN----TGPINIGNPGE  273 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~-~~~----~~~~~i~~~~~  273 (297)
                            ..+..++|+|+++++++. ...    +..+++.+|-.
T Consensus       220 ------~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          220 ------GRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             ------SSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             ------CCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence                  246789999999999998 332    44677777643

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.84  E-value=6.6e-20  Score=151.33  Aligned_cols=200  Identities=12%  Similarity=0.033  Sum_probs=135.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCcCE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEVDQ  100 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~d~  100 (297)
                      |+++||||+|+||+++++.|+++| ++|++++|+.....+....+....++.++.+|+++..            ..++|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAG-WSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            899999999999999999999999 9999999964322221111111136888999999862            125899


Q ss_pred             EEEccCCCCC-cc----cccChhhhHHHhHHHHHHHHHHHH----HcC-C-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus       101 vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      +||+||.... ..    ..+++...+++|+.++..+++++.    +.+ . ++|++||...+.                +
T Consensus       101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~----------------~  164 (272)
T 2nwq_A          101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW----------------P  164 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS----------------C
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc----------------C
Confidence            9999997542 11    234466788999999888777663    333 4 899999987642                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|+.+|.+.+.+.+.++.+   .+++++.++||.+.++....    ..... ....    ......    ..++.
T Consensus       165 ~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~----~~~~~-~~~~----~~~~~~----~~~~~  231 (272)
T 2nwq_A          165 YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV----RFGGD-QARY----DKTYAG----AHPIQ  231 (272)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------C----CCCBC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc----ccccc-hHHH----HHhhcc----CCCCC
Confidence            233467999999999999988865   47999999999998764211    00000 0000    000000    12478


Q ss_pred             HHHHHHHHHHHHhcCC
Q 022414          247 VSDMVDGLIRLMEGEN  262 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~  262 (297)
                      ++|+|+++++++..+.
T Consensus       232 pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          232 PEDIAETIFWIMNQPA  247 (272)
T ss_dssp             HHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            9999999999998764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.84  E-value=1e-20  Score=155.54  Aligned_cols=218  Identities=12%  Similarity=0.032  Sum_probs=145.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC--ccchhhhcC--CCceEEEecccCCccc---------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--KDNLRKWIG--HPRFELIRHDVTEPLL---------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~~~--~~~~~~~~~Dl~~~~~---------   95 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|.....  .+.+...+.  ..++.++++|+++...         
T Consensus         8 ~l~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            8 DLKNKVIVIAGGIKNLGALTAKTFALES-VNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHTTSS-CEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4567999999999999999999999999 9999988754321  111111111  2468889999998621         


Q ss_pred             ---CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc--C-CeEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 ---IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV--G-ARILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ---~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                         .++|++|||||......    ..+++...+++|+.++..+++++.+.  + .++|++||...+..            
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~------------  154 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY------------  154 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH------------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC------------
Confidence               26999999999765433    23445677889999999999999774  2 38999999876532            


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                          ......|+.+|.+.+.+.+.++.+.   +++++.+.||.+..+......            ...............
T Consensus       155 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~------------~~~~~~~~~~~~~~~  218 (262)
T 3ksu_A          155 ----TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE------------TKESTAFHKSQAMGN  218 (262)
T ss_dssp             ----HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------------------CCC
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC------------chHHHHHHHhcCccc
Confidence                1223569999999999999998874   799999999988654211000            000000001111223


Q ss_pred             eeeeHHHHHHHHHHHHhcCC--Cc-cEEecCCCccc
Q 022414          243 SFCYVSDMVDGLIRLMEGEN--TG-PINIGNPGEFT  275 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~--~~-~~~i~~~~~~s  275 (297)
                      .+..++|+|+++++++....  +| .+++.+|....
T Consensus       219 r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~~  254 (262)
T 3ksu_A          219 QLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYTTR  254 (262)
T ss_dssp             CSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCCC
T ss_pred             CCCCHHHHHHHHHHHcCCCCCccCCEEEECCCccCC
Confidence            47789999999999998632  34 67777765443

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.84  E-value=4.5e-20  Score=149.82  Aligned_cols=196  Identities=16%  Similarity=0.091  Sum_probs=142.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------c--
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------L--   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~--   95 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++|+.....         ....++.+|+++..            .  
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARN-WWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999 99999999653321         13566788998752            1  


Q ss_pred             CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      .++|++|||||......     ..+++...+++|+.++..+++++.+.   +.++|++||...+.               
T Consensus        75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  139 (241)
T 1dhr_A           75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD---------------  139 (241)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS---------------
T ss_pred             CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc---------------
Confidence            37999999999764322     23445677899999999999998764   23899999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh-----CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                       +......|+.+|.+.+.+.+.++.+.     +++++.++||.+-.+.        .    ........         ..
T Consensus       140 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~--------~----~~~~~~~~---------~~  197 (241)
T 1dhr_A          140 -GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM--------N----RKSMPEAD---------FS  197 (241)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH--------H----HHHSTTSC---------GG
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc--------c----cccCcchh---------hc
Confidence             22344679999999999999887653     5999999999876532        1    11111111         12


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      .+++.+|+|++++.++....    ++.+.+.+++
T Consensus       198 ~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          198 SWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             GSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             cCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence            35678999999999997654    3456665543

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.84  E-value=1.1e-19  Score=151.69  Aligned_cols=213  Identities=13%  Similarity=0.031  Sum_probs=149.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEe-cCCCCCccchhhhc--CCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD-NYFTGSKDNLRKWI--GHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||+|+||+++++.|+++| ++|++++ |+.....+....+.  ...++.++++|+++..            
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEG-YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            457899999999999999999999999 9999999 75432221111111  1246889999999865            


Q ss_pred             -----c------------CCcCEEEEccCCCCCccc------------------ccChhhhHHHhHHHHHHHHHHHH---
Q 022414           95 -----L------------IEVDQIYHLACPASPIFY------------------KYNPVKTIKTNVIGTLNMLGLAK---  136 (297)
Q Consensus        95 -----~------------~~~d~vi~~a~~~~~~~~------------------~~~~~~~~~~n~~~~~~l~~~~~---  136 (297)
                           .            .++|++|||||.......                  .+++...+++|+.++..+++++.   
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  165 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  165 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                 2            169999999997643221                  33455678999999999988875   


Q ss_pred             -HcC------C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeecc
Q 022414          137 -RVG------A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFN  205 (297)
Q Consensus       137 -~~~------~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~  205 (297)
                       +.+      . ++|++||...+.                +......|+.+|.+.+.+.+.++.+   .+++++.++||.
T Consensus       166 ~~~~~~~~~~~g~Iv~isS~~~~~----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~  229 (291)
T 1e7w_A          166 AGTPAKHRGTNYSIINMVDAMTNQ----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL  229 (291)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred             HhcCCCCCCCCcEEEEEechhhcC----------------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCC
Confidence             344      4 899999987642                2233467999999999999988876   379999999999


Q ss_pred             ccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       206 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                      +..+. . ..    +.....+....++   +     ..+..++|+|+++++++....   .| .+++.+|..
T Consensus       230 v~T~~-~-~~----~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          230 SVLVD-D-MP----PAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             BCCGG-G-SC----HHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccCCc-c-CC----HHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence            87664 2 11    1222222222211   0     025689999999999997543   44 567776643

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.84  E-value=1.1e-19  Score=147.82  Aligned_cols=220  Identities=17%  Similarity=0.141  Sum_probs=154.3

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc-----------
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~-----------   94 (297)
                      ++..++|+++||||++.||+++++.|.++| ..|++.+|+.... +...... ...++.++.+|+++..           
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~G-a~Vv~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEER-AIPVVFARHAPDG-AFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCCH-HHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCcccH-HHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999 9999999975432 2222211 1346889999999862           


Q ss_pred             -cCCcCEEEEccCCCCCcc---cccChhhhHHHhHHHHHHHHHHHH----HcCCeEEEEecceeecCCCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                       +.++|++|||||......   ..+++...+++|+.++..+++++.    +.+-++|++||...+.              
T Consensus        80 ~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~--------------  145 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVT--------------  145 (258)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHH--------------
T ss_pred             HhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhcc--------------
Confidence             236999999999754322   234466788999999888887773    3445899999987642              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCCh--hHHHHHHHHHHcCCCeEEecCCcee
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                        +......|..+|.....+.+.++.+   ++++++.+.||.+..|.......  .........+....++   +     
T Consensus       146 --~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----  215 (258)
T 4gkb_A          146 --GQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----  215 (258)
T ss_dssp             --CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----
Confidence              2223467999999999999988876   47999999999998765321100  0111222333333222   1     


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      ..+..++|+|+++++++....    +..+.+.+|-
T Consensus       216 ~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          216 RRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence            136688999999999997654    4467777763

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.84  E-value=1.1e-19  Score=148.73  Aligned_cols=215  Identities=14%  Similarity=0.046  Sum_probs=150.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc--CCCceEEEecccCCccc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~------------   95 (297)
                      ..+|+++||||+|+||+++++.|+++| +.|+++.+......+.....+  ....+.++.+|+++...            
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDG-ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            457999999999999999999999999 889886543322222211111  12467888999987521            


Q ss_pred             ------CCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCC
Q 022414           96 ------IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        96 ------~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                            .++|++||+||.......    .++.+..+++|+.++..+++++.+.   +.++|++||...+.          
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~----------  153 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI----------  153 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS----------
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc----------
Confidence                  139999999997654332    2335567899999999999999764   23899999987642          


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                            +......|+.+|.+.+.+.+.++.+   .++++..++||.+..+........  ...........++       
T Consensus       154 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~-------  218 (255)
T 3icc_A          154 ------SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD--PMMKQYATTISAF-------  218 (255)
T ss_dssp             ------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS--HHHHHHHHHTSTT-------
T ss_pred             ------CCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc--HHHHHhhhccCCc-------
Confidence                  2333467999999999999988876   379999999999988754322111  1111112222211       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                        ..+..++|+|+++++++....    +..+++.+|.
T Consensus       219 --~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          219 --NRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             --CCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence              236789999999999987543    4467887764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.84  E-value=4.7e-19  Score=142.19  Aligned_cols=212  Identities=13%  Similarity=0.069  Sum_probs=152.2

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCccc-------CCcC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL-------IEVD   99 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~-------~~~d   99 (297)
                      +...+|+++||||++.||+++++.|.+.| .+|++.+|+..  ++...... ...++..+++|+++...       .++|
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~G-a~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iD   81 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAG-AEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFD   81 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcC-CEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCC
Confidence            45679999999999999999999999999 99999998643  11111111 12468889999998632       2599


Q ss_pred             EEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcC-C-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      ++|||||......    ..++++..+++|+.++..+++++    .+.+ - ++|++||...+.                +
T Consensus        82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~----------------g  145 (247)
T 4hp8_A           82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ----------------G  145 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------C
T ss_pred             EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC----------------C
Confidence            9999999765433    33457778999999998888865    3344 3 899999987542                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH--HHHHHHHHcCCCeEEecCCceeEee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      ......|..+|.....+.+.++.+   .+++++.+.||.+-.|..    ..+.  ......+.+..++         ..+
T Consensus       146 ~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~----~~~~~~~~~~~~~~~~~Pl---------gR~  212 (247)
T 4hp8_A          146 GIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNT----EALRADAARNKAILERIPA---------GRW  212 (247)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG----HHHHTSHHHHHHHHTTCTT---------SSC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcch----hhcccCHHHHHHHHhCCCC---------CCC
Confidence            223357999999999999988876   479999999999876642    1111  1222333443333         135


Q ss_pred             eeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          245 CYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ..++|+|.++++++....   .| .+.+.+|
T Consensus       213 g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          213 GHSEDIAGAAVFLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             BCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence            678999999999987654   44 5666654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.83  E-value=2.6e-20  Score=150.90  Aligned_cols=213  Identities=17%  Similarity=0.082  Sum_probs=152.7

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~   95 (297)
                      ...+|+++||||++.||+++++.|.++| .+|++.+|+.....+...++.. ..++..+++|+++..            .
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~G-a~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAG-ARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            4679999999999999999999999999 9999999965433332222221 246888999999862            3


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH-----HcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK-----RVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      .++|++|||||......    ..++++..+++|+.++..+++++.     +.+- ++|++||...+.             
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~-------------  151 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA-------------  151 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-------------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC-------------
Confidence            36999999999766543    234567788999999988887762     2333 899999987642             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH--HHHHHHHHcCCCeEEecCCce
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  240 (297)
                         +......|+.+|.....+.+.++.+   .+++++.+.||.+..+..    ....  ..+...+....++        
T Consensus       152 ---~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~----~~~~~~~~~~~~~~~~~Pl--------  216 (255)
T 4g81_D          152 ---ARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN----TALIEDKQFDSWVKSSTPS--------  216 (255)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG----HHHHTCHHHHHHHHHHSTT--------
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchh----hcccCCHHHHHHHHhCCCC--------
Confidence               2233467999999999999988876   479999999999977642    1111  1222223333332        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                       ..+..++|+|+++++++....   .| .+.+.+|
T Consensus       217 -~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          217 -QRWGRPEELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             -CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence             135678999999999997543   44 6676665

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.83  E-value=2.3e-19  Score=146.79  Aligned_cols=213  Identities=14%  Similarity=0.084  Sum_probs=141.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCc---------ccCCcCEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEP---------LLIEVDQI  101 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~---------~~~~~d~v  101 (297)
                      ||+++||||+|+||+++++.|+++| ++|++++|+.....+ ...+.. ...+..+  |..+.         ...++|++
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~-~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAG-HTVACHDESFKQKDE-LEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTT-CEEEECCGGGGSHHH-HHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEE
Confidence            3689999999999999999999999 999999997543221 111100 1123332  33221         12369999


Q ss_pred             EEccCCC-CCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414          102 YHLACPA-SPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus       102 i~~a~~~-~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      |||||.. ....    ..+++...+++|+.++..+++++.    +.+. ++|++||...+.                +..
T Consensus        77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~  140 (254)
T 1zmt_A           77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG----------------PWK  140 (254)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS----------------CCT
T ss_pred             EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc----------------CCC
Confidence            9999976 3222    234466788999999999888873    4444 899999987642                223


Q ss_pred             CCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCC-hhHH---HHHHHHHHcCCCeEEecCCceeEee
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD-GRVV---SNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      ....|+.+|.+.+.+.+.++.+.   +++++.++||.++|+...... ..+.   +..........++         ..+
T Consensus       141 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~---------~~~  211 (254)
T 1zmt_A          141 ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL---------QRL  211 (254)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS---------SSC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCC---------CCC
Confidence            34679999999999999888763   799999999999887532211 1111   1111111111111         136


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      .+++|+|+++++++....    +..+++.+|..
T Consensus       212 ~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          212 GTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             BCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence            789999999999998654    34677776643

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.83  E-value=2e-19  Score=147.11  Aligned_cols=214  Identities=13%  Similarity=0.067  Sum_probs=152.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+|.++||||++.||+++++.|.++| .+|++.+|+.....+...++  ..+...+++|+++..            +-+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~G-a~V~i~~r~~~~l~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~  103 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEG-ARVFITGRRKDVLDAAIAEI--GGGAVGIQADSANLAELDRLYEKVKAEAGR  103 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHc--CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999999999 99999999654333222222  246778899999862            236


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      +|++|||||......    ..++++..+++|+.++..+++++.+.=   -++|++||.....                +.
T Consensus       104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~----------------~~  167 (273)
T 4fgs_A          104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST----------------GT  167 (273)
T ss_dssp             EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS----------------CC
T ss_pred             CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc----------------CC
Confidence            999999999765433    234577789999999999999885531   2689999877542                23


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCC---ChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID---DGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      .....|..+|.....+.+.++.+.   +++++.+.||.+..+.....   .......+...+....++.         .+
T Consensus       168 ~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~  238 (273)
T 4fgs_A          168 PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG---------RV  238 (273)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS---------SC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC---------CC
Confidence            334679999999999999988774   69999999999977653211   0111223333343333321         35


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCC
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~  271 (297)
                      ..++|+|+++++++....    +..+.+.+|
T Consensus       239 g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG  269 (273)
T 4fgs_A          239 GRAEEVAAAALFLASDDSSFVTGAELFVDGG  269 (273)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhcCccCCeEeECcC
Confidence            678999999999997654    446677665

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.82  E-value=2.9e-19  Score=152.17  Aligned_cols=208  Identities=13%  Similarity=0.026  Sum_probs=147.7

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc------hhhhc--CCCceEEEecccCCcc-----
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN------LRKWI--GHPRFELIRHDVTEPL-----   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~------~~~~~--~~~~~~~~~~Dl~~~~-----   94 (297)
                      ....+|+++||||+|+||+++++.|+++| ++|++++|+.....+.      ....+  ...++.++++|+++..     
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDG-ANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCC-CEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            44568999999999999999999999999 9999999986543211      11111  1246888999999862     


Q ss_pred             -------cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCC
Q 022414           95 -------LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        95 -------~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~  158 (297)
                             ..++|++|||||......    ..+++...+++|+.++..+++++..    .+. ++|++||...+..     
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~-----  194 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP-----  194 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG-----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC-----
Confidence                   127999999999765432    2344567889999999999999843    444 8999999876521     


Q ss_pred             CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEec
Q 022414          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (297)
                               .+......|+.+|.+.+.+.+.++.+.  +++++.+.|+.+....       +    ...+ .+..     
T Consensus       195 ---------~~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~-------~----~~~~-~~~~-----  248 (346)
T 3kvo_A          195 ---------VWFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA-------A----MDML-GGPG-----  248 (346)
T ss_dssp             ---------GGTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH-------H----HHHH-CC-------
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH-------H----HHhh-cccc-----
Confidence                     013345679999999999999988774  7999999998643321       1    1111 1110     


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC--CccEEecC
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGN  270 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~  270 (297)
                         ....+..++|+|+++++++....  .|.+.+.+
T Consensus       249 ---~~~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          249 ---IESQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             ---CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             ---ccccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence               11236688999999999998732  66655543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.82  E-value=1.8e-19  Score=149.06  Aligned_cols=206  Identities=12%  Similarity=0.066  Sum_probs=144.2

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc---chhh---hc--CCCceEEEecccCCccc----
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRK---WI--GHPRFELIRHDVTEPLL----   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---~~~~---~~--~~~~~~~~~~Dl~~~~~----   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+   .+..   .+  ...++.++++|+++...    
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDG-ANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCC-CEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            44568999999999999999999999999 999999997643221   1111   11  12468889999998631    


Q ss_pred             --------CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCC
Q 022414           96 --------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        96 --------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~  158 (297)
                              .++|++|||||......    ..++....+++|+.++..+++++..    .+. ++|++||...+...    
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----  156 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA----  156 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH----
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC----
Confidence                    26999999999765433    2234566889999999999988744    343 89999997754210    


Q ss_pred             CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEe
Q 022414          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (297)
                                +......|+.+|.+.+.+.+.++.+   .+++++.+.||.+.....       .    . .....     
T Consensus       157 ----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~-------~----~-~~~~~-----  209 (274)
T 3e03_A          157 ----------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA-------I----N-MLPGV-----  209 (274)
T ss_dssp             ----------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------CC-----
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch-------h----h-hcccc-----
Confidence                      0223456999999999999988876   379999999984332221       0    0 11111     


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC---CccEEec
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN---TGPINIG  269 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~  269 (297)
                          ....+..++|+|+++++++....   +|.+.+.
T Consensus       210 ----~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~~  242 (274)
T 3e03_A          210 ----DAAACRRPEIMADAAHAVLTREAAGFHGQFLID  242 (274)
T ss_dssp             ----CGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEEH
T ss_pred             ----cccccCCHHHHHHHHHHHhCccccccCCeEEEc
Confidence                11126789999999999998754   5554443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.82  E-value=7.2e-19  Score=146.22  Aligned_cols=200  Identities=13%  Similarity=0.007  Sum_probs=143.2

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc---ch---hhhc--CCCceEEEecccCCccc----
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NL---RKWI--GHPRFELIRHDVTEPLL----   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---~~---~~~~--~~~~~~~~~~Dl~~~~~----   95 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++++|+.....+   .+   ...+  ...++.++++|+++...    
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADG-ANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTT-CEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            34568999999999999999999999999 999999998653222   11   1111  12468899999998621    


Q ss_pred             --------CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc----CC-eEEEEecceeecCCCCCC
Q 022414           96 --------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        96 --------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~v~~Ss~~~~~~~~~~~  158 (297)
                              .++|++|||||......    ..++....+++|+.++..+++++.+.    +. ++|++||...+..     
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----  158 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP-----  158 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG-----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC-----
Confidence                    27999999999765433    23345667889999999999988553    44 8999999765421     


Q ss_pred             CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEe
Q 022414          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (297)
                                .......|+.+|.+.+.+.+.++.+   .+++++.++||.+...       .+    .........    
T Consensus       159 ----------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t-------~~----~~~~~~~~~----  213 (285)
T 3sc4_A          159 ----------KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT-------AA----VQNLLGGDE----  213 (285)
T ss_dssp             ----------GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC-------HH----HHHHHTSCC----
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc-------HH----HHhhccccc----
Confidence                      1123367999999999999998876   5799999999843221       11    222222211    


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                          ....+..++|+|+++++++..+.
T Consensus       214 ----~~~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          214 ----AMARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             ----CCTTCBCTHHHHHHHHHHHTSCT
T ss_pred             ----cccCCCCHHHHHHHHHHHhCCcc
Confidence                11246789999999999998764

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.82  E-value=2.9e-20  Score=151.57  Aligned_cols=195  Identities=19%  Similarity=0.132  Sum_probs=138.8

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh--cCCCceEEEeccc--CCcc----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDV--TEPL----------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl--~~~~----------   94 (297)
                      ...+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+  .......++.+|+  ++..          
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHG-ASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999 99999999654322222211  1124566777776  5431          


Q ss_pred             --cCCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                        ..++|++||+||......     ..+++...+++|+.++..+++++    ++.+. ++|++||...+.          
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------  159 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK----------  159 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS----------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC----------
Confidence              126999999999753221     23456678899999999999988    34454 899999977542          


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh----CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                            +......|+.+|.+.+.+.+.++.+.    +++++.++||.+..+.            ........        
T Consensus       160 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~------------~~~~~~~~--------  213 (247)
T 3i1j_A          160 ------GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM------------RAQAYPDE--------  213 (247)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH------------HHHHSTTS--------
T ss_pred             ------CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc------------chhccccc--------
Confidence                  33344679999999999999888763    6889999998775531            11111111        


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                       ....+..++|+|+++++++...
T Consensus       214 -~~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          214 -NPLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             -CGGGSCCGGGGTHHHHHHHSGG
T ss_pred             -CccCCCCHHHHHHHHHHHhCch
Confidence             1123567899999999999754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.82  E-value=4.9e-19  Score=143.93  Aligned_cols=208  Identities=14%  Similarity=0.101  Sum_probs=137.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-e--cCCCCCccchhhhcCCCceEEEecccCCc---------ccCCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-D--NYFTGSKDNLRKWIGHPRFELIRHDVTEP---------LLIEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---------~~~~~d   99 (297)
                      +|+++||||+|+||+++++.|+++| ++|+++ +  |+.....+ ....+  .+.+..  |..+.         ...++|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~~~~r~~~~~~~-~~~~~--~~~~~~--~~~~v~~~~~~~~~~~g~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDG-YTVVCHDASFADAAERQR-FESEN--PGTIAL--AEQKPERLVDATLQHGEAID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTT-CEEEECCGGGGSHHHHHH-HHHHS--TTEEEC--CCCCGGGHHHHHGGGSSCEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEecCCcCCHHHHHH-HHHHh--CCCccc--CHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999 999998 5  75422211 11111  123332  22111         123699


Q ss_pred             EEEEccCCCCC---cc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASP---IF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus       100 ~vi~~a~~~~~---~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ++|||||....   ..    ..+++...+++|+.++..+++++.    +.+. ++|++||...+.               
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~---------------  139 (244)
T 1zmo_A           75 TIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK---------------  139 (244)
T ss_dssp             EEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS---------------
T ss_pred             EEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC---------------
Confidence            99999997644   22    234466788999999999888874    4555 899999987652               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH-HHHHHHHHc-CCCeEEecCCceeE
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV-SNFIAQAIR-GEPLTVQAPGTQTR  242 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~  242 (297)
                       +......|+.+|.+.+.+.+.++.+   .+++++.++||.+..+.... ..... ......+.. ..++         .
T Consensus       140 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~p~---------~  208 (244)
T 1zmo_A          140 -PLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP-TSDWENNPELRERVDRDVPL---------G  208 (244)
T ss_dssp             -CCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC-HHHHHHCHHHHHHHHHHCTT---------C
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc-cccccchHHHHHHHhcCCCC---------C
Confidence             2233457999999999999988876   37999999999987764200 01111 011111211 1111         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      .+..++|+|+++++++....   .| .+.+.+|
T Consensus       209 r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          209 RLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             SCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence            36789999999999998654   34 5566554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.82  E-value=1.3e-18  Score=141.93  Aligned_cols=209  Identities=16%  Similarity=0.132  Sum_probs=145.5

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------c
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ++.++|+++||||++.||+++++.|.++| .+|++.+|+....   .      .....+++|+++..            +
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~G-a~V~~~~r~~~~~---~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELG-AQVLTTARARPEG---L------PEELFVEADLTTKEGCAIVAEATRQRL   76 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTT-CEEEEEESSCCTT---S------CTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcC-CEEEEEECCchhC---C------CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999 9999999964321   1      12336789998862            2


Q ss_pred             CCcCEEEEccCCCCCc--c----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPI--F----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~--~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      -++|++|||||.....  .    ..+++...+++|+.++..+++++    ++.+- ++|++||.....            
T Consensus        77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~------------  144 (261)
T 4h15_A           77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL------------  144 (261)
T ss_dssp             SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------
T ss_pred             CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc------------
Confidence            3699999999964321  1    23456778899999998887776    44555 899999976531            


Q ss_pred             CCCCCCC-CCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCC----------CChhHHHHHHHHHHcCC
Q 022414          165 GNVNPIG-VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNI----------DDGRVVSNFIAQAIRGE  230 (297)
Q Consensus       165 ~~~~~~~-~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~----------~~~~~~~~~~~~~~~~~  230 (297)
                          +.+ ....|+.+|.+.+.+.+.++.+   .+++++.+.||.+-.+....          .................
T Consensus       145 ----~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (261)
T 4h15_A          145 ----PLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGI  220 (261)
T ss_dssp             ----CCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCC
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCC
Confidence                211 2356999999999999988876   47999999999886543100          00000111122222222


Q ss_pred             CeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ++         ..+..++|+|+++++++....   .| .+.+.+|
T Consensus       221 Pl---------gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          221 PL---------GRPAKPEEVANLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             TT---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC---------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence            22         236789999999999997543   44 6677665

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.81  E-value=1.7e-18  Score=141.60  Aligned_cols=215  Identities=13%  Similarity=0.049  Sum_probs=151.4

Q ss_pred             cccCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCcc--------
Q 022414           28 FFQSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPL--------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~--------   94 (297)
                      +...+|+++||||+|  .||+++++.|.++| .+|++.+|+.....+ ..+.   ....++..+++|+++..        
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~G-a~Vvi~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLG-AKLVFTYRKERSRKE-LEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTT-CEEEEEESSGGGHHH-HHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCC-CEEEEEECCHHHHHH-HHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence            356789999999987  89999999999999 999999997543322 2222   22346888999999862        


Q ss_pred             ----cCCcCEEEEccCCCCCccc--------ccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCC
Q 022414           95 ----LIEVDQIYHLACPASPIFY--------KYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQ  159 (297)
Q Consensus        95 ----~~~~d~vi~~a~~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~  159 (297)
                          +.++|++|||||.......        .+++...+++|+.+...+.+++...-   -++|++||....        
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~--------  151 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE--------  151 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT--------
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc--------
Confidence                2369999999997643221        12233456788888888888776542   279999997753        


Q ss_pred             CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEec
Q 022414          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (297)
                              .+......|+.+|...+.+.+.++.+   ++++++.+.||.+-.+......  ..+.....+....++.   
T Consensus       152 --------~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~~Pl~---  218 (256)
T 4fs3_A          152 --------FAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG--GFNTILKEIKERAPLK---  218 (256)
T ss_dssp             --------SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT--THHHHHHHHHHHSTTS---
T ss_pred             --------cCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc--CCHHHHHHHHhcCCCC---
Confidence                    23334467999999999999988876   4799999999988776532211  1233344444433331   


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                            .+..++|+|+++++++....   .| .+.+.+|
T Consensus       219 ------R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          219 ------RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             ------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence                  35678999999999997643   44 6666665

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.81  E-value=6.4e-19  Score=148.42  Aligned_cols=213  Identities=15%  Similarity=0.036  Sum_probs=144.2

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCc-cc----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEP-LL----------   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~-~~----------   95 (297)
                      ...+++|+||||+|+||+++++.|+++| ++|++++|+.....+....+..  ..++.++.+|+++. ..          
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNG-IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            3457999999999999999999999999 9999999975443333333222  24688999999986 21          


Q ss_pred             --CCcCEEEEccCCCCCc----------------------------------ccccChhhhHHHhHHHHHHHHHHHHH--
Q 022414           96 --IEVDQIYHLACPASPI----------------------------------FYKYNPVKTIKTNVIGTLNMLGLAKR--  137 (297)
Q Consensus        96 --~~~d~vi~~a~~~~~~----------------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~--  137 (297)
                        .++|++|||||.....                                  ...+..+..+++|+.++..+++++..  
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence              2699999999976421                                  12233556789999999888888743  


Q ss_pred             --cCC-eEEEEecceeecCCCCC-----------CC----------------CCCCCCCCCCCCCCChHHHhHHHHHHHH
Q 022414          138 --VGA-RILLTSTSEVYGDPLVH-----------PQ----------------DESYWGNVNPIGVRSCYDEGKRVAETLM  187 (297)
Q Consensus       138 --~~~-r~v~~Ss~~~~~~~~~~-----------~~----------------~e~~~~~~~~~~~~~~Y~~sK~~~e~~~  187 (297)
                        .+. ++|++||...+......           ..                .+..........+...|+.+|.+.+.+.
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence              344 89999998754221000           00                0000000011123467999999999999


Q ss_pred             HHHHHHh-CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---C
Q 022414          188 FDYHRQH-GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---T  263 (297)
Q Consensus       188 ~~~~~~~-~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~  263 (297)
                      +.++.+. +++++.+.||.|..+....                            ......++.|+.++.++..+.   +
T Consensus       248 ~~la~e~~~i~v~~v~PG~v~T~~~~~----------------------------~~~~~~~~~a~~~~~~~~~~~~~~~  299 (311)
T 3o26_A          248 RVLANKIPKFQVNCVCPGLVKTEMNYG----------------------------IGNYTAEEGAEHVVRIALFPDDGPS  299 (311)
T ss_dssp             HHHHHHCTTSEEEEECCCSBCSGGGTT----------------------------CCSBCHHHHHHHHHHHHTCCSSCCC
T ss_pred             HHHHhhcCCceEEEecCCceecCCcCC----------------------------CCCCCHHHHHHHHHHHHhCCCCCCC
Confidence            9998874 6999999999987653110                            012477899999998887654   5


Q ss_pred             ccEEecC
Q 022414          264 GPINIGN  270 (297)
Q Consensus       264 ~~~~i~~  270 (297)
                      +.|+..+
T Consensus       300 g~~~~~s  306 (311)
T 3o26_A          300 GFFYDCS  306 (311)
T ss_dssp             SCEETC-
T ss_pred             ceEeccc
Confidence            5565554

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.80  E-value=2.7e-18  Score=145.33  Aligned_cols=216  Identities=17%  Similarity=0.104  Sum_probs=142.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc---hhhhc----CCCceEEEecccCCccc---------
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LRKWI----GHPRFELIRHDVTEPLL---------   95 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~---~~~~~----~~~~~~~~~~Dl~~~~~---------   95 (297)
                      +|+|+||||+|+||+++++.|+++| ++|+++.|+.......   +....    ...++.++.+|+++...         
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G-~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDP-SQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCT-TCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            5789999999999999999999999 8888887764332211   11110    12468899999998621         


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       .++|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.             
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~-------------  147 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM-------------  147 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS-------------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc-------------
Confidence             25999999999754322    23446678899999999999886    44565 899999987642             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhH----------HHHHHHHHHcCCCe
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRV----------VSNFIAQAIRGEPL  232 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~----------~~~~~~~~~~~~~~  232 (297)
                         +......|+.+|.+.+.+.+.+..+   .+++++.++|+.+..+.........          ..............
T Consensus       148 ---~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
T 1jtv_A          148 ---GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQ  224 (327)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHH
Confidence               1223457999999999999988875   5899999999999876532110000          00000000000000


Q ss_pred             EEecCCceeEeeeeHHHHHHHHHHHHhcCCCccEEecC
Q 022414          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN  270 (297)
Q Consensus       233 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i~~  270 (297)
                      .+ +     +-...++|+|+++++++..+.....++.+
T Consensus       225 ~~-~-----~~~~~pedvA~~i~~l~~~~~~~~~~~tg  256 (327)
T 1jtv_A          225 VF-R-----EAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (327)
T ss_dssp             HH-H-----HHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             hh-h-----hcCCCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            00 0     01257999999999999876544444444

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.79  E-value=2.1e-18  Score=141.51  Aligned_cols=202  Identities=9%  Similarity=-0.014  Sum_probs=139.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHh---cCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCccc--------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLME---NEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL--------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~---~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~--------   95 (297)
                      ..+|+++||||+|+||+++++.|++   .| ++|++++|+.....+....+.   ....+.++.+|+++...        
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPG-SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTT-CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCC-CeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            3578999999999999999999999   89 999999996432222111111   12468889999998621        


Q ss_pred             ------CCcC--EEEEccCCCCC--c-----ccccChhhhHHHhHHHHHHHHHHHHHc------CC-eEEEEecceeecC
Q 022414           96 ------IEVD--QIYHLACPASP--I-----FYKYNPVKTIKTNVIGTLNMLGLAKRV------GA-RILLTSTSEVYGD  153 (297)
Q Consensus        96 ------~~~d--~vi~~a~~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~-r~v~~Ss~~~~~~  153 (297)
                            .++|  ++|||||....  .     ...+++...+++|+.++..+++++.+.      +. ++|++||...+. 
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~-  161 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-  161 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC-
Confidence                  1468  99999997532  1     123456678999999999999998653      23 799999987652 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh-CCcEEEEeeccccCCCCCCCChhHH-----HHHHHHHH
Q 022414          154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIARIFNTYGPRMNIDDGRVV-----SNFIAQAI  227 (297)
Q Consensus       154 ~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ivrp~~v~G~~~~~~~~~~~-----~~~~~~~~  227 (297)
                                     +......|+.+|.+.+.+.+.++.+. +++++.+.||.+-.+..    ....     ......+.
T Consensus       162 ---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~----~~~~~~~~~~~~~~~~~  222 (259)
T 1oaa_A          162 ---------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ----QLARETSKDPELRSKLQ  222 (259)
T ss_dssp             ---------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH----HHHHHHCSCHHHHHHHH
T ss_pred             ---------------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchH----HHHhhccCChhHHHHHH
Confidence                           23344679999999999999998774 48899999987754321    0000     00011111


Q ss_pred             cCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          228 RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      ...         ....+..++|+|+++++++...
T Consensus       223 ~~~---------p~~~~~~p~dvA~~v~~l~~~~  247 (259)
T 1oaa_A          223 KLK---------SDGALVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             HHH---------HTTCSBCHHHHHHHHHHHHHHC
T ss_pred             Hhh---------hcCCcCCHHHHHHHHHHHHhhc
Confidence            100         0113678999999999999753

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.79  E-value=2.8e-18  Score=141.48  Aligned_cols=216  Identities=13%  Similarity=0.057  Sum_probs=145.9

Q ss_pred             cCCCEEEEEcC--CchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~   95 (297)
                      ..+|+++||||  +|+||+++++.|+++| ++|++++|+.....+.+...+. .++.++.+|+++..            .
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQG-AQLVLTGFDRLRLIQRITDRLP-AKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTT-CEEEEEECSCHHHHHHHHTTSS-SCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCC-CEEEEEecChHHHHHHHHHhcC-CCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            35789999999  9999999999999999 9999999864321122222221 35778899999862            1


Q ss_pred             C---CcCEEEEccCCCCC-----cc----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCC
Q 022414           96 I---EVDQIYHLACPASP-----IF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        96 ~---~~d~vi~~a~~~~~-----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~  160 (297)
                      .   ++|++|||||....     ..    ..+++...+++|+.++..+++++.+.   +-++|++||...++        
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~--------  154 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA--------  154 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC--------
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc--------
Confidence            2   79999999997641     11    23445667899999999999999654   23799999865421        


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCC-----CChhH---HHHHHHHHHcC
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNI-----DDGRV---VSNFIAQAIRG  229 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~-----~~~~~---~~~~~~~~~~~  229 (297)
                               ......|+.+|.+.+.+.+.++.+.   +++++.++||.+..+....     .....   ...........
T Consensus       155 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (269)
T 2h7i_A          155 ---------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR  225 (269)
T ss_dssp             ---------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH
T ss_pred             ---------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhcc
Confidence                     2233679999999999999888763   7999999999886642100     00000   00111111111


Q ss_pred             CCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          230 EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      .++   +     +.+..++|+|+++++++....   .| .+.+.+|.
T Consensus       226 ~p~---~-----rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          226 API---G-----WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             CTT---C-----CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             CCc---c-----cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence            111   0     125678999999999998643   44 56776653

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.79  E-value=1.6e-17  Score=139.05  Aligned_cols=216  Identities=13%  Similarity=0.044  Sum_probs=141.8

Q ss_pred             ccCCCEEEEEcCC--chhHHHHHHHHHhcCCCeEEEEecCC----------CCCccchhhhcCC---CceEEEecc----
Q 022414           29 FQSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYF----------TGSKDNLRKWIGH---PRFELIRHD----   89 (297)
Q Consensus        29 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~----------~~~~~~~~~~~~~---~~~~~~~~D----   89 (297)
                      ...+|+++||||+  |+||+++++.|+++| ++|++++|+.          ....+....+...   .......+|    
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAG-AEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTT-CEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCC-CeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            4567999999999  999999999999999 9999987641          0111111111000   002222222    


Q ss_pred             --------cCC--------cc------------cCCcCEEEEccCCCC--Cc----ccccChhhhHHHhHHHHHHHHHHH
Q 022414           90 --------VTE--------PL------------LIEVDQIYHLACPAS--PI----FYKYNPVKTIKTNVIGTLNMLGLA  135 (297)
Q Consensus        90 --------l~~--------~~------------~~~~d~vi~~a~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~~  135 (297)
                              +++        ..            ..++|++|||||...  ..    ...+++...+++|+.++..+++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                    221        11            126999999998542  11    123446678999999999999999


Q ss_pred             HHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCC-ChHHHhHHHHHHHHHHHHHH----hCCcEEEEeecccc
Q 022414          136 KRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTY  207 (297)
Q Consensus       136 ~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v~  207 (297)
                      .+.   +-++|++||...+.                +.... ..|+.+|.+.+.+.+.++.+    .+++++.++||.+.
T Consensus       164 ~~~m~~~g~iv~isS~~~~~----------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~  227 (297)
T 1d7o_A          164 LPIMNPGGASISLTYIASER----------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG  227 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTS----------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred             HHHhccCceEEEEecccccc----------------CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccc
Confidence            764   23799999977542                11122 46999999999999888755    58999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       208 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      ++.....  .....+........++         ..+..++|+|+++++++....   .| .+++.+|.
T Consensus       228 T~~~~~~--~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          228 SRAAKAI--GFIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             CCCSSCC--SHHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cchhhhc--cccHHHHHHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            8864321  1222333333222221         135689999999999987532   34 67777764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.77  E-value=4.2e-18  Score=149.86  Aligned_cols=211  Identities=14%  Similarity=0.008  Sum_probs=146.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc------------CC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------------~~   97 (297)
                      ..+++++||||+|.||.++++.|.++| .+|++++|+..  .+.+.......++.++.+|+++...            .+
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~G-a~Vvl~~r~~~--~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~  287 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDG-ATVVAIDVDGA--AEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGG  287 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEECGGG--HHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTT
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCC-CEEEEEeCCcc--HHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 89999988532  2223332222356789999998621            13


Q ss_pred             -cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc----CC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 -VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 -~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                       +|+||||||......    ..+++...+++|+.++.++.+++...    +. +||++||...+.               
T Consensus       288 ~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~---------------  352 (454)
T 3u0b_A          288 KVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA---------------  352 (454)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH---------------
T ss_pred             CceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC---------------
Confidence             999999999765432    23446678899999999999999875    44 899999987642               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                       +......|..+|...+.+.+.++.+   .+++++.+.||.+.++.....    ............+         ...+
T Consensus       353 -g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~~~---------l~r~  418 (454)
T 3u0b_A          353 -GNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI----PLATREVGRRLNS---------LFQG  418 (454)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--------------CHHHHHSBT---------TSSC
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc----chhhHHHHHhhcc---------ccCC
Confidence             1223367999999999998887765   479999999999987652110    0000000111111         1134


Q ss_pred             eeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          245 CYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      ...+|+|+++++++....   +| .+++.++.
T Consensus       419 g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          419 GQPVDVAELIAYFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             BCHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred             CCHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence            678999999999997543   34 66776653

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.77  E-value=7.7e-18  Score=141.96  Aligned_cols=200  Identities=15%  Similarity=0.049  Sum_probs=135.1

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC-----CCccch---hhhcCCCceEEEecccCCcc-----
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-----GSKDNL---RKWIGHPRFELIRHDVTEPL-----   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-----~~~~~~---~~~~~~~~~~~~~~Dl~~~~-----   94 (297)
                      +...+|+++||||+|+||+++++.|+++| ++|++.++...     ...+..   ...+..... ...+|+.+..     
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~G-a~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~   82 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERG-ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKL   82 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHH
Confidence            34568999999999999999999999999 99999876421     111111   111111111 2346777652     


Q ss_pred             -------cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEeccee-ecCCCCC
Q 022414           95 -------LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEV-YGDPLVH  157 (297)
Q Consensus        95 -------~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~-~~~~~~~  157 (297)
                             ..++|++|||||......    ..++++..+++|+.++..+++++    ++.+. ++|++||... ++.    
T Consensus        83 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~----  158 (319)
T 1gz6_A           83 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN----  158 (319)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC----
Confidence                   236999999999765432    23456678899999998888887    44565 8999999754 321    


Q ss_pred             CCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEE
Q 022414          158 PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV  234 (297)
Q Consensus       158 ~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (297)
                                   .+...|+.+|.+.+.+.+.++.+   .+++++.++|+.+ .+..    ....+.             
T Consensus       159 -------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~----~~~~~~-------------  207 (319)
T 1gz6_A          159 -------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT----ETVMPE-------------  207 (319)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT----GGGSCH-------------
T ss_pred             -------------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc----cccCCh-------------
Confidence                         12357999999999999988876   4799999999987 3221    000000             


Q ss_pred             ecCCceeEeeeeHHHHHHHHHHHHhcCC--Cc-cEEec
Q 022414          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG-PINIG  269 (297)
Q Consensus       235 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~-~~~i~  269 (297)
                           ....++.++|+|+++++++..+.  .| .|++.
T Consensus       208 -----~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~  240 (319)
T 1gz6_A          208 -----DLVEALKPEYVAPLVLWLCHESCEENGGLFEVG  240 (319)
T ss_dssp             -----HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEE
T ss_pred             -----hhhccCCHHHHHHHHHHHhCchhhcCCCEEEEC
Confidence                 01124578999999999987643  33 44443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.76  E-value=2.8e-17  Score=145.96  Aligned_cols=217  Identities=14%  Similarity=0.116  Sum_probs=149.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc--cchhhhcC--CCceEEEecccCCccc----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWIG--HPRFELIRHDVTEPLL----------   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~~--~~~~~~~~~Dl~~~~~----------   95 (297)
                      .++++++||||+|+||.++++.|.++|..+|++++|+.....  +.+...+.  ..++.++.+|++|...          
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            457999999999999999999999999336999999754221  12211111  2468899999998621          


Q ss_pred             -CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                       ..+|+|||+||......    ..++....+++|+.++.++.+++++.+. +||++||...+...               
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~---------------  368 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA---------------  368 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC---------------
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCC---------------
Confidence             24799999999765422    2344566788999999999999988877 89999997653211               


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHH
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  249 (297)
                       .....|+.+|...+.+...+.. .++++++++|+.+++++...       ....        ....  .....+++.+|
T Consensus       369 -~g~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~gm~~-------~~~~--------~~~~--~~g~~~i~~e~  429 (486)
T 2fr1_A          369 -PGLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAE-------GPVA--------DRFR--RHGVIEMPPET  429 (486)
T ss_dssp             -TTCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC---------------------------CT--TTTEECBCHHH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCcccc-------hhHH--------HHHH--hcCCCCCCHHH
Confidence             1225699999999988776654 48999999999887764211       0000        0001  11246799999


Q ss_pred             HHHHHHHHHhcCCCccEEecCCCcccHHHHHHHHH
Q 022414          250 MVDGLIRLMEGENTGPINIGNPGEFTMLELAENVK  284 (297)
Q Consensus       250 va~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~  284 (297)
                      +++++..++..+.... .+.   .+.|..|...+.
T Consensus       430 ~a~~l~~~l~~~~~~~-~v~---~~d~~~~~~~~~  460 (486)
T 2fr1_A          430 ACRALQNALDRAEVCP-IVI---DVRWDRFLLAYT  460 (486)
T ss_dssp             HHHHHHHHHHTTCSSC-EEC---EECHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCeE-EEE---eCCHHHHhhhhc
Confidence            9999999999765433 232   356777766543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.74  E-value=2.7e-17  Score=134.92  Aligned_cols=205  Identities=12%  Similarity=0.005  Sum_probs=134.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc-------------cC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL-------------LI   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~-------------~~   96 (297)
                      .+|+++||||+|+||+++++.|+++| ++|++++|+.....+....+.. ..++.++++|+++..             ..
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAG-ATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999 9999999864322211111110 236788999999862             23


Q ss_pred             CcCEEEEccCC--C-------CC--cccccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCC
Q 022414           97 EVDQIYHLACP--A-------SP--IFYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        97 ~~d~vi~~a~~--~-------~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~  160 (297)
                      ++|++|||||.  .       .+  ....+++...+++|+.++..+.+++.    +.+. ++|++||...+..       
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  155 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY-------  155 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC-------
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC-------
Confidence            58999999952  1       11  11233456677889888877766653    4454 8999999876421       


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecC
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                                .+...|+.+|.+.+.+.+.++.+   .+++++.++||.+..+....    .....  ............ 
T Consensus       156 ----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~~~~~--~~~~~~~~~~~~-  218 (260)
T 2qq5_A          156 ----------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKE----HMAKE--EVLQDPVLKQFK-  218 (260)
T ss_dssp             ----------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--------------------------
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHH----hhccc--cccchhHHHHHH-
Confidence                      12357999999999999988865   48999999999998775211    00000  000000000000 


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcC
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                       .....+..++|+|+++++++..+
T Consensus       219 -~~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          219 -SAFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCT
T ss_pred             -hhhccCCCHHHHHHHHHHHhcCc
Confidence             00012457899999999999865

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.73  E-value=3.7e-18  Score=144.51  Aligned_cols=169  Identities=12%  Similarity=0.095  Sum_probs=116.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCC------eEEEEecCCC-CCccchhhhcCCCceEEEecccC-----CcccCCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVT-----EPLLIEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~------~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~d   99 (297)
                      .|||+||||+||||++++..|++.|..      +|+++++... .........+....+.+. .|+.     ...+.++|
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D   82 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD   82 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence            479999999999999999999998832      8999988531 000110001111111111 2332     22456899


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C--eEEEEeccee-ecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTSTSEV-YGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      +|||+||....  ...++.+.++.|+.++.++++++++.+ .  +++++|+..- ..     +..++.   .....|...
T Consensus        83 ~Vih~Ag~~~~--~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~---~~~~~p~~~  152 (327)
T 1y7t_A           83 YALLVGAAPRK--AGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKN---APGLNPRNF  152 (327)
T ss_dssp             EEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHT---CTTSCGGGE
T ss_pred             EEEECCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHH---cCCCChhhe
Confidence            99999997643  245678889999999999999999975 3  7887776531 00     000000   012445567


Q ss_pred             HHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCC
Q 022414          176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM  211 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~  211 (297)
                      |+.+|...|++...+++..+++..++|+++||||+.
T Consensus       153 yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          153 TAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             EECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             eccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            999999999999998888899999999999999874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.72  E-value=4.8e-16  Score=138.62  Aligned_cols=216  Identities=16%  Similarity=0.153  Sum_probs=150.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc--cchhhhcC--CCceEEEecccCCccc-------CCc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWIG--HPRFELIRHDVTEPLL-------IEV   98 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~~--~~~~~~~~~Dl~~~~~-------~~~   98 (297)
                      .++++++||||+|+||.++++.|.++|...|++++|+.....  +.+...+.  ..++.++.+|++|...       ..+
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l  336 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP  336 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence            357999999999999999999999999337999999753221  12222121  2368889999998632       249


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHc-CC-eEEEEeccee-ecCCCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEV-YGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      |+|||+||......    ..++....+++|+.++.++.+++... +. +||++||... ++.                 .
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~-----------------~  399 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN-----------------A  399 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC-----------------T
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC-----------------C
Confidence            99999999765432    22345667899999999999998776 65 8999999754 321                 2


Q ss_pred             CCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHH
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  251 (297)
                      ....|+.+|...+.+.+.+. ..++++++++||.+.+.+...  . ....   .+...           ....++.+|++
T Consensus       400 g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~--~-~~~~---~~~~~-----------g~~~l~~e~~a  461 (511)
T 2z5l_A          400 GQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAA--G-AGEE---SLSRR-----------GLRAMDPDAAV  461 (511)
T ss_dssp             TBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCC--C-HHHH---HHHHH-----------TBCCBCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcccc--c-ccHH---HHHhc-----------CCCCCCHHHHH
Confidence            23579999999999988764 458999999998874333221  1 1111   11110           12468899999


Q ss_pred             HHHHHHHhcCCCccEEecCCCcccHHHHHHHHH
Q 022414          252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVK  284 (297)
Q Consensus       252 ~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~  284 (297)
                      +++..++..+... +.+.   .+.|..+...+.
T Consensus       462 ~~l~~al~~~~~~-v~v~---~~d~~~~~~~~~  490 (511)
T 2z5l_A          462 DALLGAMGRNDVC-VTVV---DVDWERFAPATN  490 (511)
T ss_dssp             HHHHHHHHHTCSE-EEEC---CBCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCE-EEEE---eCCHHHHHhhhc
Confidence            9999999886543 3332   356777766554

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.71  E-value=1.6e-16  Score=134.30  Aligned_cols=224  Identities=12%  Similarity=-0.000  Sum_probs=122.0

Q ss_pred             cccCCCEEEEEcC--CchhHHHHHHHHHhcCCCeEEEEecCC-----------CCCcc----------chhhhcCCC---
Q 022414           28 FFQSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYF-----------TGSKD----------NLRKWIGHP---   81 (297)
Q Consensus        28 ~~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~-----------~~~~~----------~~~~~~~~~---   81 (297)
                      +...+|+++||||  +|+||+++++.|+++| ++|++++|+.           ....+          .....+...   
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAG-ARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD   83 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTT-CEEEEEECHHHHHHHHC-------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCC-CEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence            3456799999999  8999999999999999 9999998642           00000          000111000   


Q ss_pred             --ceEEEecc------------cCC--------c------------ccCCcCEEEEccCCCC--Cc----ccccChhhhH
Q 022414           82 --RFELIRHD------------VTE--------P------------LLIEVDQIYHLACPAS--PI----FYKYNPVKTI  121 (297)
Q Consensus        82 --~~~~~~~D------------l~~--------~------------~~~~~d~vi~~a~~~~--~~----~~~~~~~~~~  121 (297)
                        ...++.+|            +++        .            ...++|++|||||...  ..    ...+++...+
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence              02333333            222        1            0126999999998642  11    1234466788


Q ss_pred             HHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCC-ChHHHhHHHHHHHHHHHHHH----
Q 022414          122 KTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQ----  193 (297)
Q Consensus       122 ~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----  193 (297)
                      ++|+.++..+++++.+.   +-++|++||...+.                +.... ..|+.+|.+.+.+.+.++.+    
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~----------------~~~~~~~~Y~asKaal~~l~~~la~el~~~  227 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKEGGSALALSYIASEK----------------VIPGYGGGMSSAKAALESDCRTLAFEAGRA  227 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------THHHHHHHHHHHHHH
T ss_pred             hHhhHHHHHHHHHHHHHHhcCceEEEEecccccc----------------ccCccchhhHHHHHHHHHHHHHHHHHhccc
Confidence            99999999999999764   23799999987542                11112 46999999999998887754    


Q ss_pred             hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEec
Q 022414          194 HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIG  269 (297)
Q Consensus       194 ~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~  269 (297)
                      .+++++.++||.+..+............+......     ..........+..++|+|+++++++....   .| .+.+.
T Consensus       228 ~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vd  302 (319)
T 2ptg_A          228 RAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAID-----YSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVD  302 (319)
T ss_dssp             HCCEEEEEEECCCC------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             cCeeEEEEeeCCccChhhhhcccccchhhHHHHHH-----HHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEEC
Confidence            58999999999987764211000000000000000     00000111246789999999999997533   44 56776


Q ss_pred             CCCc
Q 022414          270 NPGE  273 (297)
Q Consensus       270 ~~~~  273 (297)
                      +|..
T Consensus       303 GG~~  306 (319)
T 2ptg_A          303 NGLH  306 (319)
T ss_dssp             TTCT
T ss_pred             CCce
Confidence            6643

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.71  E-value=4.3e-16  Score=131.30  Aligned_cols=219  Identities=12%  Similarity=0.049  Sum_probs=137.4

Q ss_pred             cccCCCEEEEEcC--CchhHHHHHHHHHhcCCCeEEEEecCCC----------CCccchhhhcCCC---ceEEEec----
Q 022414           28 FFQSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFT----------GSKDNLRKWIGHP---RFELIRH----   88 (297)
Q Consensus        28 ~~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~~----------~~~~~~~~~~~~~---~~~~~~~----   88 (297)
                      +...+|+++||||  +|+||+++++.|+++| ++|++++|+..          ...+.........   ...++.+    
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAG-ARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTT-CEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCC-CEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence            4456799999999  8999999999999999 99999986420          0111111110000   0233333    


Q ss_pred             --------ccCC--------cc------------cCCcCEEEEccCCCC--Cc----ccccChhhhHHHhHHHHHHHHHH
Q 022414           89 --------DVTE--------PL------------LIEVDQIYHLACPAS--PI----FYKYNPVKTIKTNVIGTLNMLGL  134 (297)
Q Consensus        89 --------Dl~~--------~~------------~~~~d~vi~~a~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~  134 (297)
                              |+++        ..            ..++|++|||||...  ..    ...+++...+++|+.++..++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                    3332        10            126999999999642  11    12344667889999999999999


Q ss_pred             HHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCC-ChHHHhHHHHHHHHHHHHHH----hCCcEEEEeeccc
Q 022414          135 AKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNT  206 (297)
Q Consensus       135 ~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v  206 (297)
                      +.+.   +-++|++||...+.                +.... ..|+.+|.+.+.+.+.++.+    .+++++.++||.+
T Consensus       164 ~~~~m~~~g~Iv~isS~~~~~----------------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v  227 (315)
T 2o2s_A          164 FGPIMNEGGSAVTLSYLAAER----------------VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPL  227 (315)
T ss_dssp             HSTTEEEEEEEEEEEEGGGTS----------------CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCC
T ss_pred             HHHHHhcCCEEEEEecccccc----------------cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccc
Confidence            9654   23799999987542                11112 36999999999999887755    4799999999988


Q ss_pred             cCCCCCC----CChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          207 YGPRMNI----DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       207 ~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      ..+....    ....+...+...+....++         ..+..++|+|+++++++....   .| .+.+.+|.
T Consensus       228 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          228 KSRAASAIGKSGEKSFIDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             CCHHHHHTTCSSSSCHHHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cchhhhhccccccchhHHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            6642100    0001111221111111111         135688999999999997533   44 56666653

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.69  E-value=1.4e-16  Score=145.48  Aligned_cols=195  Identities=15%  Similarity=-0.023  Sum_probs=125.1

Q ss_pred             cccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC--------CCccchhhhcCCCceEEEecccCCcc---
Q 022414           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--------GSKDNLRKWIGHPRFELIRHDVTEPL---   94 (297)
Q Consensus        26 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~Dl~~~~---   94 (297)
                      ..+...+|+++||||+|+||+++++.|+++| ++|++++|...        ...+.....+...... ..+|+++..   
T Consensus        13 ~~~~l~gk~~lVTGas~GIG~aiA~~La~~G-a~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~   90 (613)
T 3oml_A           13 GKLRYDGRVAVVTGAGAGLGREYALLFAERG-AKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGA   90 (613)
T ss_dssp             --CCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHH
Confidence            3455678999999999999999999999999 99999887211        1111111111111111 235666542   


Q ss_pred             ---------cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCC
Q 022414           95 ---------LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLV  156 (297)
Q Consensus        95 ---------~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~  156 (297)
                               ..++|++|||||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.    
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~----  166 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY----  166 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH----
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC----
Confidence                     125999999999765432    33456778899999999999888    45555 899999977542    


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeE
Q 022414          157 HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLT  233 (297)
Q Consensus       157 ~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  233 (297)
                                  +......|+.+|.+.+.+.+.++.+.   +++++.+.|+.+- +..                .+..  
T Consensus       167 ------------~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~~----------------~~~~--  215 (613)
T 3oml_A          167 ------------GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RMT----------------EGIL--  215 (613)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------CCCC--
T ss_pred             ------------CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hhh----------------hhcc--
Confidence                        12234679999999999999888763   7999999997542 110                0000  


Q ss_pred             EecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       234 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                          .......+..+|+|.++++++...
T Consensus       216 ----~~~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          216 ----PDILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             ----CHHHHTTCCGGGTHHHHHHTTSTT
T ss_pred             ----chhhhhcCCHHHHHHHHHHhcCCC
Confidence                001112347899999999988764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.68  E-value=2.6e-15  Score=127.26  Aligned_cols=161  Identities=9%  Similarity=-0.035  Sum_probs=113.8

Q ss_pred             CCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCC---------CCCc---cchhh-hcCCCceEEEecccCCc--c
Q 022414           32 NMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYF---------TGSK---DNLRK-WIGHPRFELIRHDVTEP--L   94 (297)
Q Consensus        32 ~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~---------~~~~---~~~~~-~~~~~~~~~~~~Dl~~~--~   94 (297)
                      +|+++||||++  .||.++++.|+++| ++|++.+|..         ....   ..... ......+..+.+|+++.  .
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G-~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRN-VKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTT-CEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCC-CEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            68999999975  99999999999999 9999777543         1111   11100 00112366777887655  2


Q ss_pred             ------------------c------------CCcCEEEEccCCCC--Ccc----cccChhhhHHHhHHHHHHHHHHHHHc
Q 022414           95 ------------------L------------IEVDQIYHLACPAS--PIF----YKYNPVKTIKTNVIGTLNMLGLAKRV  138 (297)
Q Consensus        95 ------------------~------------~~~d~vi~~a~~~~--~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~  138 (297)
                                        .            .++|++|||||...  ...    ..+++...+++|+.++..+.+++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              1            15999999999642  111    23446678999999999999998654


Q ss_pred             C---CeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCC-hHHHhHHHHHHHHHHHHHH----hCCcEEEEeeccccCC
Q 022414          139 G---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS-CYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGP  209 (297)
Q Consensus       139 ~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v~G~  209 (297)
                      =   -++|++||...+.                +..... .|..+|.+.+.+.+.++.+    .++++..+.||.+..+
T Consensus       161 m~~~g~Iv~isS~~~~~----------------~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQK----------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEEEEECGGGTS----------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             HhhCCeEEEEeCccccC----------------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            2   2799999987542                222222 6999999999998877654    4899999999988754

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.67  E-value=3.3e-15  Score=132.33  Aligned_cols=214  Identities=15%  Similarity=0.139  Sum_probs=147.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc--cchhhhcC--CCceEEEecccCCccc-----------C
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWIG--HPRFELIRHDVTEPLL-----------I   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~~--~~~~~~~~~Dl~~~~~-----------~   96 (297)
                      +++++||||+|+||.++++.|.++|...|+++.|+.....  +.+...+.  ..++.++.+|++|...           .
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999448888888643221  22222221  2468899999998621           2


Q ss_pred             CcCEEEEccCCC-CCcc----cccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPA-SPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        97 ~~d~vi~~a~~~-~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      .+|+|||+||.. ....    ..++....+++|+.++.++.+++.+.+. +||++||...+.                ..
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~----------------g~  382 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVW----------------GS  382 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHT----------------TC
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcC----------------CC
Confidence            599999999976 3221    2344667889999999999999988877 899999977542                11


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  250 (297)
                      .....|..+|...+.+.+.+. ..+++++.+.||.+.+++....     ......+....           ...+..++.
T Consensus       383 ~g~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~-----~~~~~~l~~~g-----------~~~l~pe~~  445 (496)
T 3mje_A          383 GGQPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATD-----PEVHDRLVRQG-----------VLAMEPEHA  445 (496)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC-----------CHHHHHTT-----------EEEECHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccC-----hHHHHHHHhcC-----------CCCCCHHHH
Confidence            223579999999999887765 4589999999998877654221     01111111111           235688999


Q ss_pred             HHHHHHHHhcCCCccEEecCCCcccHHHHHHH
Q 022414          251 VDGLIRLMEGENTGPINIGNPGEFTMLELAEN  282 (297)
Q Consensus       251 a~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~  282 (297)
                      ++++..++..+.... .+   -.+.|..+...
T Consensus       446 ~~~l~~~l~~~~~~~-~v---~~ldw~~~~~~  473 (496)
T 3mje_A          446 LGALDQMLENDDTAA-AI---TLMDWEMFAPA  473 (496)
T ss_dssp             HHHHHHHHHHTCSEE-EE---CEECHHHHHHH
T ss_pred             HHHHHHHHcCCCceE-EE---EEccHHHHHhh
Confidence            999999998765221 11   13456665543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.61  E-value=2.4e-14  Score=128.17  Aligned_cols=217  Identities=12%  Similarity=0.078  Sum_probs=146.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCC------------CccchhhhcC--CCceEEEecccCCcc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTG------------SKDNLRKWIG--HPRFELIRHDVTEPL   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~------------~~~~~~~~~~--~~~~~~~~~Dl~~~~   94 (297)
                      .++++++||||+|.||.++++.|.++|...|+++ +|+...            ..+.+...+.  ..++.++.+|++|..
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            4579999999999999999999999993347776 787422            1111111111  246889999999862


Q ss_pred             -----------cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcC-----C-eEEEEecceeecC
Q 022414           95 -----------LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG-----A-RILLTSTSEVYGD  153 (297)
Q Consensus        95 -----------~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~-r~v~~Ss~~~~~~  153 (297)
                                 ...+|+|||+||......    ..++....+++|+.++.++.+++....     . +||++||...+. 
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~-  407 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW-  407 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT-
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC-
Confidence                       125899999999765432    234466788999999999999997765     5 799999987642 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeE
Q 022414          154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLT  233 (297)
Q Consensus       154 ~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  233 (297)
                                     +......|..+|...+.+...+.. .+++++.+.||.+ ..++... . ...   ..+....   
T Consensus       408 ---------------g~~g~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~pG~~-~tgm~~~-~-~~~---~~~~~~g---  462 (525)
T 3qp9_A          408 ---------------GGAGQGAYAAGTAFLDALAGQHRA-DGPTVTSVAWSPW-EGSRVTE-G-ATG---ERLRRLG---  462 (525)
T ss_dssp             ---------------CCTTCHHHHHHHHHHHHHHTSCCS-SCCEEEEEEECCB-TTSGGGS-S-HHH---HHHHHTT---
T ss_pred             ---------------CCCCCHHHHHHHHHHHHHHHHHHh-CCCCEEEEECCcc-ccccccc-h-hhH---HHHHhcC---
Confidence                           122236799999999988655433 4899999999988 3222111 1 111   1111111   


Q ss_pred             EecCCceeEeeeeHHHHHHHHHHHHhcCCCccEEecCCCcccHHHHHHHHH
Q 022414          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVK  284 (297)
Q Consensus       234 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~  284 (297)
                              ...+..+++++++..++..+..... +.   .+.|..+...+.
T Consensus       463 --------~~~l~pee~a~~l~~~l~~~~~~v~-v~---~~dw~~~~~~~~  501 (525)
T 3qp9_A          463 --------LRPLAPATALTALDTALGHGDTAVT-IA---DVDWSSFAPGFT  501 (525)
T ss_dssp             --------BCCBCHHHHHHHHHHHHHHTCSEEE-EC---CBCHHHHHHHHH
T ss_pred             --------CCCCCHHHHHHHHHHHHhCCCCeEE-EE---eCCHHHHHhhcc
Confidence                    1357899999999999988653322 22   456776665544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.56  E-value=1.1e-13  Score=125.87  Aligned_cols=221  Identities=16%  Similarity=0.109  Sum_probs=149.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEeccc-CCc---------ccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDV-TEP---------LLIE   97 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~---------~~~~   97 (297)
                      ...+|.++||||++.||+++++.|.++| ++|++.+|..  ..+....+.. ...+..+.+|+ .+.         ...+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~G-a~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYG-AKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCC-CEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence            3457899999999999999999999999 9999887632  1111111111 12456677888 432         1236


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++|||||......    ..++++..+++|+.++..+.+++.    +.+- ++|++||.....                
T Consensus       396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~----------------  459 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY----------------  459 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc----------------
Confidence            999999999765432    234566789999999988887773    3444 899999976531                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|+.+|.....+.+.++.+   .+++++.+.|+. -.+. .   .    ...    ...          .....
T Consensus       460 ~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m-~---~----~~~----~~~----------~~~~~  516 (604)
T 2et6_A          460 GNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM-T---L----SIM----REQ----------DKNLY  516 (604)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------------------CCSS
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc-c---c----ccC----chh----------hccCC
Confidence            1222357999999999999888876   479999999973 2211 0   0    000    000          01235


Q ss_pred             eHHHHHHHHHHHHhcCC--Cc-cEEecCC-----------------CcccHHHHHHHHHHhhcccC
Q 022414          246 YVSDMVDGLIRLMEGEN--TG-PINIGNP-----------------GEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~--~~-~~~i~~~-----------------~~~s~~e~~~~i~~~~g~~~  291 (297)
                      ..+|+|.++++++....  .| .+.+.+|                 ...+..++.+...+....+.
T Consensus       517 ~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  582 (604)
T 2et6_A          517 HADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFTT  582 (604)
T ss_dssp             CGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCSS
T ss_pred             CHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcccc
Confidence            78999999999886543  23 4444433                 34688999998888777654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.54  E-value=2e-13  Score=124.21  Aligned_cols=221  Identities=16%  Similarity=0.080  Sum_probs=142.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC--------CCccchhhhcCCCceEEEecccCCcc-----
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--------GSKDNLRKWIGHPRFELIRHDVTEPL-----   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~Dl~~~~-----   94 (297)
                      +...+|.++||||++.||+++++.|.++| ++|++.+|...        ...+.....+...+.. ..+|+++..     
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~G-a~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~   81 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLG-AKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKI   81 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcC-CEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHH
Confidence            34567999999999999999999999999 99999887541        1111111111111111 124555431     


Q ss_pred             -------cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCC
Q 022414           95 -------LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHP  158 (297)
Q Consensus        95 -------~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~  158 (297)
                             +.++|++|||||......    ..++++..+++|+.++..+.+++    ++.+- ++|++||.....      
T Consensus        82 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~------  155 (604)
T 2et6_A           82 VETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY------  155 (604)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC------
Confidence                   236999999999764332    23446678999999998888777    34454 899999976532      


Q ss_pred             CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEe
Q 022414          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (297)
                                +......|+.+|.....+.+.++.+   .+++++.+.|+ +..        .+.....       .    
T Consensus       156 ----------~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T--------~m~~~~~-------~----  205 (604)
T 2et6_A          156 ----------GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARS--------RMTESIM-------P----  205 (604)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCC--------HHHHTTS-------C----
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcC--------ccccccC-------C----
Confidence                      1122357999999999999988876   47999999995 211        1111000       0    


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC--Cc-cEEecCC------------------CcccHHHHHHHHHHhhcc
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN--TG-PINIGNP------------------GEFTMLELAENVKEVNFY  289 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~-~~~i~~~------------------~~~s~~e~~~~i~~~~g~  289 (297)
                         .........+|+|.++++++....  .| .+.+.+|                  ...+..++.+...+....
T Consensus       206 ---~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          206 ---PPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             ---HHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             ---hhhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence               000112478999999999987643  23 3444332                  345778888877765433

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.48  E-value=4.9e-13  Score=132.00  Aligned_cols=222  Identities=17%  Similarity=0.149  Sum_probs=143.1

Q ss_pred             ccCCCEEEEEcCCch-hHHHHHHHHHhcCCCeEEEEe-cCCCCCccc---hhhhcC--CCceEEEecccCCcc-------
Q 022414           29 FQSNMRILVTGGAGF-IGSHLVDKLMENEKNEVIVVD-NYFTGSKDN---LRKWIG--HPRFELIRHDVTEPL-------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~-iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~~---~~~~~~--~~~~~~~~~Dl~~~~-------   94 (297)
                      ...+++++||||+|. ||.++++.|++.| .+|++++ |+.....+.   +...+.  ...+.++.+|+++..       
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~G-A~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGG-AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTT-CEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCC-CEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            356789999999998 9999999999999 8999884 533222111   111111  235788999999851       


Q ss_pred             ----------cC-CcCEEEEccCCCCCc-cc------ccChhhhHHHhHHHHHHHHHHHHHcC-------CeEEEEecce
Q 022414           95 ----------LI-EVDQIYHLACPASPI-FY------KYNPVKTIKTNVIGTLNMLGLAKRVG-------ARILLTSTSE  149 (297)
Q Consensus        95 ----------~~-~~d~vi~~a~~~~~~-~~------~~~~~~~~~~n~~~~~~l~~~~~~~~-------~r~v~~Ss~~  149 (297)
                                .. ++|++|||||..... ..      .++....+++|+.++..++++++...       -+||++||..
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence                      11 599999999976543 21      23456788999999999998874322       2799999976


Q ss_pred             eecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH-HHHHHHHhC--CcEEEEeeccccCCCCCCCChhHHHHHHHHH
Q 022414          150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL-MFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQA  226 (297)
Q Consensus       150 ~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~~--~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~  226 (297)
                      .+..                  ....|+.+|...+.+ .+.++.+..  ++++.+.||++.+........ ...    ..
T Consensus       831 g~~g------------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~-~~~----~~  887 (1887)
T 2uv8_A          831 GTFG------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANN-IIA----EG  887 (1887)
T ss_dssp             TCSS------------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CC-TTH----HH
T ss_pred             hccC------------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccch-hHH----HH
Confidence            4311                  225699999999998 555554332  899999999998432111000 011    11


Q ss_pred             HcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC-C----CccEEec--CCCc--ccHHHHHHHHH
Q 022414          227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE-N----TGPINIG--NPGE--FTMLELAENVK  284 (297)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~----~~~~~i~--~~~~--~s~~e~~~~i~  284 (297)
                      ....++          .+..++|+|+++++++... .    +..+.+.  +|-.  ..+.++...+.
T Consensus       888 ~~~~pl----------r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~lr  944 (1887)
T 2uv8_A          888 IEKMGV----------RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLR  944 (1887)
T ss_dssp             HHTTSC----------CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHHH
T ss_pred             HHhcCC----------CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHHH
Confidence            111111          2458999999999998765 1    3355553  4422  24555555444

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.48  E-value=2e-12  Score=110.93  Aligned_cols=203  Identities=14%  Similarity=0.011  Sum_probs=131.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHh-cCCCeEEEEecCCCCCccc-----------hhhhc--CCCceEEEecccCCc---
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDN-----------LRKWI--GHPRFELIRHDVTEP---   93 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~~~~~~~-----------~~~~~--~~~~~~~~~~Dl~~~---   93 (297)
                      .+|++|||||++.||+++++.|.+ .| ..|++++|......+.           +.+..  ....+..+.+|+++.   
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~G-A~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFG-ADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHC-CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCC-CEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            479999999999999999999999 99 9999999875443321           11111  123577889999986   


Q ss_pred             ---------cc-CCcCEEEEccCCC-------------CCc-------------------------ccccChhhhHHHhH
Q 022414           94 ---------LL-IEVDQIYHLACPA-------------SPI-------------------------FYKYNPVKTIKTNV  125 (297)
Q Consensus        94 ---------~~-~~~d~vi~~a~~~-------------~~~-------------------------~~~~~~~~~~~~n~  125 (297)
                               .+ -++|++|||||..             ...                         ...+++...+++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence                     23 4689999999862             110                         11223344556666


Q ss_pred             HHHH-HHHHHHHHcC-----CeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCC
Q 022414          126 IGTL-NMLGLAKRVG-----ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGI  196 (297)
Q Consensus       126 ~~~~-~l~~~~~~~~-----~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~  196 (297)
                      .+.. .+++++....     .++|.+||....-.              .+......|+.+|.+.+.+.+.++.+   .++
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~--------------~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GI  284 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEIT--------------WPIYWHGALGKAKVDLDRTAQRLNARLAKHGG  284 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG--------------HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc--------------CCCccchHHHHHHHHHHHHHHHHHHHhCccCE
Confidence            5554 5566654432     37999999764310              01111256999999999999988876   479


Q ss_pred             cEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       197 ~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      +++.+.||.+-.+.....+  ..+........  ++.         .....+|||+++.+++...
T Consensus       285 RVNaVaPG~i~T~~~~~ip--~~~~~~~~~~~--~m~---------r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          285 GANVAVLKSVVTQASAAIP--VMPLYISMVYK--IMK---------EKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             EEEEEEECCCCCTTGGGST--HHHHHHHHHHH--HHH---------HTTCCCCHHHHHHHHHHHT
T ss_pred             EEEEEEcCCCcChhhhcCC--CChHHHHHHHh--hhc---------CCcChHHHHHHHHHHhcch
Confidence            9999999999876532211  11111111111  111         1223488999999888764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.46  E-value=8.2e-14  Score=133.57  Aligned_cols=199  Identities=19%  Similarity=0.156  Sum_probs=130.7

Q ss_pred             ccCCCEEEEEcCCch-hHHHHHHHHHhcCCCeEEEE-ecCCCCCccchhhh---cC--CCceEEEecccCCcc-------
Q 022414           29 FQSNMRILVTGGAGF-IGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKW---IG--HPRFELIRHDVTEPL-------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~-iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~---~~--~~~~~~~~~Dl~~~~-------   94 (297)
                      ...+++++||||+|. ||+++++.|++.| .+|+++ .|+.....+....+   +.  ...+.++.+|+++..       
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~G-A~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGG-AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHT-CEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCc-CEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            346789999999998 9999999999999 899888 45443322222222   11  235788999999861       


Q ss_pred             ----------cC-CcCEEEEccCCCCCc-cc------ccChhhhHHHhHHHHHHHHHHHHHc------C-CeEEEEecce
Q 022414           95 ----------LI-EVDQIYHLACPASPI-FY------KYNPVKTIKTNVIGTLNMLGLAKRV------G-ARILLTSTSE  149 (297)
Q Consensus        95 ----------~~-~~d~vi~~a~~~~~~-~~------~~~~~~~~~~n~~~~~~l~~~~~~~------~-~r~v~~Ss~~  149 (297)
                                .. ++|++|||||..... ..      .++....+++|+.++..++++++..      + -+||++||..
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence                      11 589999999976543 21      2345677899999999998887331      2 2689999975


Q ss_pred             eecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHH-HHHHHHh--CCcEEEEeeccccCCCCCCCChhHHHHHHHHH
Q 022414          150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM-FDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA  226 (297)
Q Consensus       150 ~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~-~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~  226 (297)
                      ...                +  ....|+.+|.+.+.+. +.++.+.  .++++.+.||++.+........     .....
T Consensus       632 G~~----------------G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e-----~~~~~  688 (1688)
T 2pff_A          632 GTF----------------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANN-----IIAEG  688 (1688)
T ss_dssp             TTS----------------S--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTT-----TCSTT
T ss_pred             hcc----------------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCch-----HHHHH
Confidence            431                1  2356999999999983 3333322  2788888999887533211100     00000


Q ss_pred             HcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      ...  .        ......++|+|+++++++...
T Consensus       689 l~~--i--------plR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          689 IEK--M--------GVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             TSS--S--------SCCCCCCCTTHHHHHHHTSTT
T ss_pred             HHh--C--------CCCCCCHHHHHHHHHHHhCCC
Confidence            010  0        012447899999999999876

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.46  E-value=2.7e-12  Score=109.20  Aligned_cols=205  Identities=12%  Similarity=0.040  Sum_probs=132.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHh-cCCCeEEEEecCCCCCccc-----------hhhhc--CCCceEEEecccCCcc-
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDN-----------LRKWI--GHPRFELIRHDVTEPL-   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~~~~~~~-----------~~~~~--~~~~~~~~~~Dl~~~~-   94 (297)
                      ..+|+++||||++.||.++++.|.+ .| ..|++++|......+.           ..+..  ....+..+.+|+++.. 
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~G-A~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCG-ADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHC-CEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcC-CEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            3479999999999999999999999 99 9999998865432211           12111  1235778899999862 


Q ss_pred             -----------cCCcCEEEEccCCCC---------------Cc-----------------------ccccChhhhHHHhH
Q 022414           95 -----------LIEVDQIYHLACPAS---------------PI-----------------------FYKYNPVKTIKTNV  125 (297)
Q Consensus        95 -----------~~~~d~vi~~a~~~~---------------~~-----------------------~~~~~~~~~~~~n~  125 (297)
                                 +-++|++||+||...               +.                       ...+++...+++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence                       236999999998641               10                       12233555677777


Q ss_pred             HHHH-HHHHHHHHc-----CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---h-C
Q 022414          126 IGTL-NMLGLAKRV-----GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---H-G  195 (297)
Q Consensus       126 ~~~~-~l~~~~~~~-----~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~-~  195 (297)
                      .+.. .+++++...     +.++|.+||......              .+......|+.+|...+.+.+.++.+   . +
T Consensus       204 ~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~--------------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~G  269 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT--------------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGG  269 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG--------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             hhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc--------------CCCccchHHHHHHHHHHHHHHHHHHHhCcccC
Confidence            7665 555555432     247999999765311              12112267999999999999988876   4 7


Q ss_pred             CcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC
Q 022414          196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       196 ~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      ++++.+.|+.+-.+.....+  ..+........  .+.         .+...+||++++.+++...-
T Consensus       270 IRVNaVaPG~i~T~~s~~ip--~~p~y~~~l~~--~mk---------r~G~~Ed~a~~i~~L~sd~l  323 (405)
T 3zu3_A          270 GDARVSVLKAVVSQASSAIP--MMPLYLSLLFK--VMK---------EKGTHEGCIEQVYSLYKDSL  323 (405)
T ss_dssp             CEEEEEECCCCCCHHHHTST--THHHHHHHHHH--HHH---------HHTCCCCHHHHHHHHHHHTT
T ss_pred             eEEEEEEeCCCcCchhhcCC--CCcHHHHHHHH--HHh---------cCCCcHHHHHHHHHHHhccc
Confidence            89999999988765322111  01111111111  111         23345889999999887643

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.44  E-value=5.3e-12  Score=124.57  Aligned_cols=221  Identities=18%  Similarity=0.143  Sum_probs=142.4

Q ss_pred             ccCCCEEEEEcCCch-hHHHHHHHHHhcCCCeEEEEecC-CCCCcc---chhhhcC--CCceEEEecccCCcc-------
Q 022414           29 FQSNMRILVTGGAGF-IGSHLVDKLMENEKNEVIVVDNY-FTGSKD---NLRKWIG--HPRFELIRHDVTEPL-------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~-iG~~l~~~L~~~g~~~v~~~~r~-~~~~~~---~~~~~~~--~~~~~~~~~Dl~~~~-------   94 (297)
                      ...+++++||||+|. ||.++++.|++.| .+|+++++. .....+   .+...+.  ...+.++.+|+++..       
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~G-A~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGG-AKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTT-CEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCC-CEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            356789999999999 9999999999999 899988543 221111   1111121  235788999999851       


Q ss_pred             --------cC-CcCEEEEccCCCCCc-cc------ccChhhhHHHhHHHHHHHHHHHHH------cC-CeEEEEecceee
Q 022414           95 --------LI-EVDQIYHLACPASPI-FY------KYNPVKTIKTNVIGTLNMLGLAKR------VG-ARILLTSTSEVY  151 (297)
Q Consensus        95 --------~~-~~d~vi~~a~~~~~~-~~------~~~~~~~~~~n~~~~~~l~~~~~~------~~-~r~v~~Ss~~~~  151 (297)
                              .. ++|++|||||..... ..      .++....+++|+.++..++++++.      .+ -+||++||...+
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence                    22 589999999976543 21      234567889999999888876322      12 278999997643


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeecccc-CCCCCCCChhHHHHHHHHHH
Q 022414          152 GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTY-GPRMNIDDGRVVSNFIAQAI  227 (297)
Q Consensus       152 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~-G~~~~~~~~~~~~~~~~~~~  227 (297)
                      ..                  ....|+.+|...+.+...+..+   ..++++.+.||++- .+...   .   ........
T Consensus       808 ~g------------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~---~---~~~~~~~~  863 (1878)
T 2uv9_A          808 FG------------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMS---A---NNLVAEGV  863 (1878)
T ss_dssp             SS------------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCS---H---HHHTHHHH
T ss_pred             cC------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccc---c---chhhHHHH
Confidence            11                  1246999999999987765433   13899999999987 43211   1   01111122


Q ss_pred             cCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-----CccEEe--cCCCc--ccHHHHHHHHH
Q 022414          228 RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-----TGPINI--GNPGE--FTMLELAENVK  284 (297)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-----~~~~~i--~~~~~--~s~~e~~~~i~  284 (297)
                      ....+          .....+|+|+++++++....     +..+.+  .+|..  ..+.++...+.
T Consensus       864 ~~~pl----------r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~lr  919 (1878)
T 2uv9_A          864 EKLGV----------RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKLR  919 (1878)
T ss_dssp             HTTTC----------CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHHH
T ss_pred             HhcCC----------CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHHH
Confidence            22111          23488999999999886542     345554  34422  35666655443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.38  E-value=1.1e-11  Score=107.11  Aligned_cols=203  Identities=8%  Similarity=-0.115  Sum_probs=129.3

Q ss_pred             cCCCEEEEEcCCchhHHH--HHHHHHhcCCCeEEEEecCCCCCc-----------cchhhhcC--CCceEEEecccCCcc
Q 022414           30 QSNMRILVTGGAGFIGSH--LVDKLMENEKNEVIVVDNYFTGSK-----------DNLRKWIG--HPRFELIRHDVTEPL   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~--l~~~L~~~g~~~v~~~~r~~~~~~-----------~~~~~~~~--~~~~~~~~~Dl~~~~   94 (297)
                      ..+|+++||||++.||.+  +++.|.+.| ..|++++|......           +.+.+...  ...+..+++|+++..
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~G-a~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPE-AHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSC-CEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCC-CEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHH
Confidence            457999999999999999  999999999 99999998754322           22222211  235788999999862


Q ss_pred             ------------cCCcCEEEEccCCC-------------CCcc-------------------------cccChhhhHHHh
Q 022414           95 ------------LIEVDQIYHLACPA-------------SPIF-------------------------YKYNPVKTIKTN  124 (297)
Q Consensus        95 ------------~~~~d~vi~~a~~~-------------~~~~-------------------------~~~~~~~~~~~n  124 (297)
                                  ..++|++||+||..             ....                         ..++....+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence                        23699999999864             1000                         122233455555


Q ss_pred             HHHHH-HHHHHHHHcC-----CeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH----h
Q 022414          125 VIGTL-NMLGLAKRVG-----ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ----H  194 (297)
Q Consensus       125 ~~~~~-~l~~~~~~~~-----~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~  194 (297)
                      ..+.. .+++++...+     .++|.+||......              .+......|+.+|.+.+.+.+.++.+    .
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~--------------~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~  282 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT--------------YKIYREGTIGIAKKDLEDKAKLINEKLNRVI  282 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG--------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC--------------CCccccHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            55444 5556555433     36899998764210              12222367999999999998887754    5


Q ss_pred             CCcEEEEeeccccCCCCCCCC-hh-HHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC
Q 022414          195 GIEIRIARIFNTYGPRMNIDD-GR-VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       195 ~~~~~ivrp~~v~G~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      +++++.+.||.+-.+...... .. ....+...+.+.               ...+|+++.+.+++...-
T Consensus       283 GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~---------------G~~E~v~e~~~~L~sd~~  337 (418)
T 4eue_A          283 GGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEK---------------NIHENCIMQIERMFSEKI  337 (418)
T ss_dssp             SCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHT---------------TCCCCHHHHHHHHHHHTT
T ss_pred             CeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhc---------------CChHHHHHHHHHHhhccc
Confidence            799999999988765321111 01 111111111111               234788999998887654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.36  E-value=3e-12  Score=119.93  Aligned_cols=202  Identities=15%  Similarity=0.132  Sum_probs=137.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHH-hcCCCeEEEEecCCCCCc--cchhhhcC--CCceEEEecccCCcc---------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNYFTGSK--DNLRKWIG--HPRFELIRHDVTEPL---------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~-~~g~~~v~~~~r~~~~~~--~~~~~~~~--~~~~~~~~~Dl~~~~---------   94 (297)
                      ..++++++||||+|.||+++++.|. ++|...|++++|+.....  +.+.+.+.  ..++.++.+|+++..         
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            3467999999999999999999999 789346999999743222  11212111  246888999999862         


Q ss_pred             --cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                        ...+|++|||||......    ..+++...+++|+.++.++.+++.. ..+||++||...+-.               
T Consensus       607 ~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l~iV~~SS~ag~~g---------------  670 (795)
T 3slk_A          607 PDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DVALVLFSSVSGVLG---------------  670 (795)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TSEEEEEEETHHHHT---------------
T ss_pred             HHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CCEEEEEccHHhcCC---------------
Confidence              126899999999765433    2344667889999999999998832 238999999876421               


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHH
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  248 (297)
                       ......|..+|...+.+.+++.. .+++++.+.||.+-.++..   ...-......+.+..           ...+..+
T Consensus       671 -~~g~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g~~---~~~~~~~~~~~~~~g-----------~~~l~~~  734 (795)
T 3slk_A          671 -SGGQGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHGMA---STLREAEQDRLARSG-----------LLPISTE  734 (795)
T ss_dssp             -CSSCHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCCHH---HHHHHHHHHHHHHTT-----------BCCCCHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcchhh---ccccHHHHHHHHhcC-----------CCCCCHH
Confidence             12235799999988887776654 4899999999887655411   011111112222211           1245678


Q ss_pred             HHHHHHHHHHhcCC
Q 022414          249 DMVDGLIRLMEGEN  262 (297)
Q Consensus       249 Dva~~~~~~~~~~~  262 (297)
                      ++.+.+..++..+.
T Consensus       735 e~~~~~~~~l~~~~  748 (795)
T 3slk_A          735 EGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHhCCC
Confidence            88888888887654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.03  E-value=1.7e-09  Score=76.90  Aligned_cols=93  Identities=22%  Similarity=0.140  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a  105 (297)
                      ++|+|+|+|+ |++|+.+++.|.+.|.++|++++|+..    ...... ..++..+.+|+.+.     ...++|+|||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~----~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLA----ALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHH----HHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHH----HHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            4689999999 999999999999998678999998532    222221 34677888888764     245899999998


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                      +..                  ....+++++.+.|++++.+|+
T Consensus        78 ~~~------------------~~~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           78 PFF------------------LTPIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             CGG------------------GHHHHHHHHHHTTCEEECCCS
T ss_pred             Cch------------------hhHHHHHHHHHhCCCEEEecC
Confidence            421                  246889999999997665554

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.03  E-value=1.5e-09  Score=112.50  Aligned_cols=161  Identities=13%  Similarity=0.083  Sum_probs=110.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc---chhhhc-CCCceEEEecccCCcc-----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKWI-GHPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---~~~~~~-~~~~~~~~~~Dl~~~~-----------   94 (297)
                      ..+++++||||+|.||+++++.|.++|...|++++|+......   ....+. ...++..+.+|+++..           
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            4689999999999999999999999993348888887544321   111111 1235778899999862           


Q ss_pred             cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ...+|++||+||......    ..+++...+++|+.++.++.+++...-   -+||++||....-               
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~--------------- 2026 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR--------------- 2026 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT---------------
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC---------------
Confidence            236999999999754322    345567788999999999988876642   2799999977542               


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeecccc
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY  207 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~  207 (297)
                       .......|+.+|...+.+.+....+ |++...+..+.+-
T Consensus      2027 -g~~g~~~Y~aaKaal~~l~~~rr~~-Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2027 -GNAGQANYGFANSAMERICEKRRHD-GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             -TCTTCHHHHHHHHHHHHHHHHHHHT-TSCCCEEEECCBC
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHC-CCcEEEEEccCcC
Confidence             1122357999999999998876655 7877777776543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.01  E-value=8.5e-10  Score=93.03  Aligned_cols=168  Identities=11%  Similarity=0.058  Sum_probs=103.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCC------eEEEEecC----CCCCccchhhhcCC--Cce-EEEecccCCcccCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNY----FTGSKDNLRKWIGH--PRF-ELIRHDVTEPLLIE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~------~v~~~~r~----~~~~~~~~~~~~~~--~~~-~~~~~Dl~~~~~~~   97 (297)
                      +.|||+||||+||+|++++..|+..+..      +|.++++.    ..........+...  .-. .+...+-...++.+
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKD   83 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCC
Confidence            3589999999999999999999998732      79998875    21111101111110  111 11111111235679


Q ss_pred             cCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C--eEEEEeccee---ecCCCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTSTSEV---YGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~v~~Ss~~~---~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      +|+|||+||...  ....+..+.+..|+...+++++.+++.+ .  +++++|...-   +--...   .       ..++
T Consensus        84 aD~Vi~~ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~---~-------~~~p  151 (329)
T 1b8p_A           84 ADVALLVGARPR--GPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKS---A-------PSLP  151 (329)
T ss_dssp             CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHT---C-------TTSC
T ss_pred             CCEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHH---c-------CCCC
Confidence            999999998643  2344566788999999999999999984 4  7888876320   000000   0       0111


Q ss_pred             CCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCC
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~  210 (297)
                      +...|+.++....++...+++..+++..-++...|+|..
T Consensus       152 ~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          152 AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            223466677777777777777777766666655567743

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.99  E-value=1.3e-08  Score=105.92  Aligned_cols=223  Identities=16%  Similarity=0.156  Sum_probs=137.4

Q ss_pred             cCCCEEEEEcCCch-hHHHHHHHHHhcCCCeEEEEecCCCCC----ccchhhhcCC--CceEEEecccCCcc--------
Q 022414           30 QSNMRILVTGGAGF-IGSHLVDKLMENEKNEVIVVDNYFTGS----KDNLRKWIGH--PRFELIRHDVTEPL--------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~-iG~~l~~~L~~~g~~~v~~~~r~~~~~----~~~~~~~~~~--~~~~~~~~Dl~~~~--------   94 (297)
                      ..+|+++||||++. ||+++++.|++.| .+|++.+|+....    .+.+...+..  ..+..+.+|+++..        
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~G-A~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGG-ATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTT-CEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCC-CEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            56899999999999 9999999999999 9999999865331    1112222222  24678899998751        


Q ss_pred             --------cCCcCEEEEccCCC----CC-----cccccChh----hhHHHhHHHHHHHHHHHHH----cCC--e--EEEE
Q 022414           95 --------LIEVDQIYHLACPA----SP-----IFYKYNPV----KTIKTNVIGTLNMLGLAKR----VGA--R--ILLT  145 (297)
Q Consensus        95 --------~~~~d~vi~~a~~~----~~-----~~~~~~~~----~~~~~n~~~~~~l~~~~~~----~~~--r--~v~~  145 (297)
                              +-++|++|||||..    ..     .....+..    ..+++|+.+...+++++.+    .+.  +  ++..
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence                    12589999999971    11     01122232    2378888888877776643    332  1  2222


Q ss_pred             ecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH--h--CCcEEEEeeccccCCCCCCCChhHHHH
Q 022414          146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ--H--GIEIRIARIFNTYGPRMNIDDGRVVSN  221 (297)
Q Consensus       146 Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~--~~~~~ivrp~~v~G~~~~~~~~~~~~~  221 (297)
                      +|. ..+                .......|+.+|.+.+.+.+.++.+  .  +++++.+.||++-+........ ..  
T Consensus      2293 ~ss-~~g----------------~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~-~~-- 2352 (3089)
T 3zen_D         2293 GSP-NRG----------------MFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQND-AI-- 2352 (3089)
T ss_dssp             ECS-STT----------------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTT-TT--
T ss_pred             CCc-ccc----------------cCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccch-hH--
Confidence            221 111                0111246999999999999999887  3  4788889999887543221111 01  


Q ss_pred             HHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-----CccE--EecCCC---cccHHHHHHHHHH
Q 022414          222 FIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-----TGPI--NIGNPG---EFTMLELAENVKE  285 (297)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-----~~~~--~i~~~~---~~s~~e~~~~i~~  285 (297)
                        .........          .....+|+|.++++++....     ....  .+.+|-   ...+.++...+++
T Consensus      2353 --~~~~~~~~~----------r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D         2353 --VSAVEEAGV----------TTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp             --HHHHGGGSC----------BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred             --HHHHHhcCC----------CCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence              111111111          12278999999999887543     1223  333542   3578888776644

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.81  E-value=1.9e-08  Score=84.11  Aligned_cols=114  Identities=11%  Similarity=0.106  Sum_probs=76.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEec--CCCCCc---cchhhhcC-C-CceEEEecc-cCCcccCCcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDN--YFTGSK---DNLRKWIG-H-PRFELIRHD-VTEPLLIEVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r--~~~~~~---~~~~~~~~-~-~~~~~~~~D-l~~~~~~~~d~vi~  103 (297)
                      |||+||||+|++|++++..|+..+. .++.++++  +.....   ..+..... . ..+++...+ -...++.++|+|||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            6899999999999999999998873 35777877  321111   01111111 1 233444332 12456789999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecc
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~  148 (297)
                      +||...  ....+..+.+..|+..++++++++++.+-.+++++|-
T Consensus        81 ~Ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~vlv~SN  123 (313)
T 1hye_A           81 TSGVPR--KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVITN  123 (313)
T ss_dssp             CCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred             CCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecC
Confidence            998643  2234566788999999999999999987326666553

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.81  E-value=2e-08  Score=83.60  Aligned_cols=112  Identities=14%  Similarity=0.061  Sum_probs=76.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEec--CCCCCc---cchhhhcC-CCceEEEecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDN--YFTGSK---DNLRKWIG-HPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r--~~~~~~---~~~~~~~~-~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |||+|+||+|++|++++..|+..+. .++.++++  ......   ..+..... ...+.+...|  ..++.++|+|||+|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~--~~a~~~aDvVi~~a   78 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG--YEDTAGSDVVVITA   78 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC--GGGGTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCC--HHHhCCCCEEEEcC
Confidence            7999999999999999999998873 26888877  321111   11111111 1233333322  44678999999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecc
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS  148 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~  148 (297)
                      |...  .......+.+..|+...+.+++++++.+. .+++++|-
T Consensus        79 g~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           79 GIPR--QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             CCCC--CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            8543  22334567789999999999999999976 56666653

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.78  E-value=2.7e-08  Score=83.67  Aligned_cols=113  Identities=14%  Similarity=0.012  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcC--CC-ceEEEec--ccCCcccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG--HP-RFELIRH--DVTEPLLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~--Dl~~~~~~~~d~vi~~  104 (297)
                      +.|||+|+||+|++|..++..|+..|. .+|++++++..  ......+..  .. .+..+..  |+ ..++.++|+|||+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~-~~al~gaDvVi~~   83 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQL-EAALTGMDLIIVP   83 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHH-HHHHTTCSEEEEC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCH-HHHcCCCCEEEEc
Confidence            358999999999999999999988763 57888887543  111111111  11 2222211  11 2356799999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecc
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS  148 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~  148 (297)
                      +|....  ...+..+.+..|+..++.+++.+.+.+. .+++++|-
T Consensus        84 ag~~~~--~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           84 AGVPRK--PGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             CCCCCC--SSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            985432  2334567789999999999999999886 56666653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.50  E-value=6.4e-08  Score=80.06  Aligned_cols=77  Identities=9%  Similarity=0.174  Sum_probs=55.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCc-----ccCCcCEEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEP-----LLIEVDQIYH  103 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~-----~~~~~d~vi~  103 (297)
                      ..+++++||||+|++|+++++.|.+.| .+|++++|+..+.. .+.+.+. ..++.++.+|+++.     ...++|++||
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G-~~V~i~~R~~~~~~-~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn  194 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEG-AEVVLCGRKLDKAQ-AAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT  194 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHH-HHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEECCHHHHH-HHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEE
Confidence            467999999999999999999999999 88999999643222 1211111 11355667788664     2346899999


Q ss_pred             ccCCC
Q 022414          104 LACPA  108 (297)
Q Consensus       104 ~a~~~  108 (297)
                      +++..
T Consensus       195 ~ag~g  199 (287)
T 1lu9_A          195 AGAIG  199 (287)
T ss_dssp             CCCTT
T ss_pred             CCCcc
Confidence            99753

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.42  E-value=4.7e-06  Score=70.44  Aligned_cols=164  Identities=13%  Similarity=-0.033  Sum_probs=98.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHH-hcCCCeEEEEecCCCCCccc-----------hhhhcC--CCceEEEecccCCc---
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNYFTGSKDN-----------LRKWIG--HPRFELIRHDVTEP---   93 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~-~~g~~~v~~~~r~~~~~~~~-----------~~~~~~--~~~~~~~~~Dl~~~---   93 (297)
                      .+|++|||||+..+|.+.+..|. +.| ..++++.+........           ..+...  ......+.+|+.+.   
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~G-A~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYG-AATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHC-CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCC-CCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            46999999999999999999987 678 8888888865433221           111111  23577899999886   


Q ss_pred             ---------ccCCcCEEEEccCCCCCcccc------------------------c-----------Ch---hhhHHHh-H
Q 022414           94 ---------LLIEVDQIYHLACPASPIFYK------------------------Y-----------NP---VKTIKTN-V  125 (297)
Q Consensus        94 ---------~~~~~d~vi~~a~~~~~~~~~------------------------~-----------~~---~~~~~~n-~  125 (297)
                               ..-++|++||+++........                        .           ..   +.+..+. .
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~  207 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG  207 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence                     233699999999965311000                        0           00   0111100 0


Q ss_pred             HHHHHHHHHHHHcC-----CeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh-CCcEE
Q 022414          126 IGTLNMLGLAKRVG-----ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIR  199 (297)
Q Consensus       126 ~~~~~l~~~~~~~~-----~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~  199 (297)
                      ......+.+....+     .+++-+|+...-          ..    .|......+|.+|...|...+.++.+. +++..
T Consensus       208 s~~s~w~~al~~a~lla~G~siva~SYiGse----------~t----~P~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~  273 (401)
T 4ggo_A          208 EDWERWIKQLSKEGLLEEGCITLAYSYIGPE----------AT----QALYRKGTIGKAKEHLEATAHRLNKENPSIRAF  273 (401)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEECCCCG----------GG----HHHHTTSHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred             hHHHHHHHHHHhhhcccCCceEEEEeccCcc----------ee----ecCCCccHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence            11112344444444     367777775421          00    011122468999999999999998774 45566


Q ss_pred             EEeeccccCC
Q 022414          200 IARIFNTYGP  209 (297)
Q Consensus       200 ivrp~~v~G~  209 (297)
                      ++-++.+-..
T Consensus       274 v~v~~a~vT~  283 (401)
T 4ggo_A          274 VSVNKGLVTR  283 (401)
T ss_dssp             EEECCCCCCT
T ss_pred             EEEcCccccc
Confidence            6666554433

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.41  E-value=2.4e-06  Score=71.32  Aligned_cols=110  Identities=15%  Similarity=0.032  Sum_probs=74.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccc---hhhhcCCCceEEEec-ccCCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKWIGHPRFELIRH-DVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~-Dl~~~~~~~~d~vi~~a~~  107 (297)
                      |||.|+||+|++|..++..|+..+. .+|.+++++.  ....   +........+....+ +-...++.++|+||+++|.
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~   78 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV   78 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence            6999999999999999999988763 6899999865  1111   111111112332211 1112246899999999986


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ..  ....+..+.+..|+...+.+++.+.+..-  +++++|
T Consensus        79 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           79 PR--KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             CC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            53  22344556789999999999999988764  677764

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.35  E-value=1.3e-06  Score=76.60  Aligned_cols=103  Identities=17%  Similarity=0.190  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcc-----cCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPL-----LIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~-----~~~~d~vi~~  104 (297)
                      .+++|+|+| +|++|+++++.|.+.| ++|++.+|+...    ....... ..+..+.+|+.+..     ..++|+|||+
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G-~~V~v~~R~~~~----a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~   75 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSG-IKVTVACRTLES----AKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL   75 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTT-CEEEEEESSHHH----HHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCc-CEEEEEECCHHH----HHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence            368999998 8999999999999999 889999985322    2222111 24677888887642     3479999999


Q ss_pred             cCCCCCcccccChhhhHHH--h-------HHHHHHHHHHHHHcCCeE
Q 022414          105 ACPASPIFYKYNPVKTIKT--N-------VIGTLNMLGLAKRVGARI  142 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~--n-------~~~~~~l~~~~~~~~~r~  142 (297)
                      ++......   -...+++.  +       ......++++|++.|+++
T Consensus        76 a~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~  119 (450)
T 1ff9_A           76 IPYTFHAT---VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITV  119 (450)
T ss_dssp             CC--CHHH---HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEE
T ss_pred             CccccchH---HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeE
Confidence            97532110   01112221  1       235688999999999864

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.35  E-value=3.4e-06  Score=61.42  Aligned_cols=69  Identities=20%  Similarity=0.234  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi~~a  105 (297)
                      +|+|+|+|+ |++|+.+++.|.+.| ++|++++|+..    .........++..+.+|..+.      ...++|+||++.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g-~~v~~~d~~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~   77 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKG-HDIVLIDIDKD----ICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT   77 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCHH----HHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCHH----HHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence            589999996 999999999999999 99999988532    222221112455677776543      245799999986


Q ss_pred             C
Q 022414          106 C  106 (297)
Q Consensus       106 ~  106 (297)
                      +
T Consensus        78 ~   78 (140)
T 1lss_A           78 G   78 (140)
T ss_dssp             S
T ss_pred             C
Confidence            3

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.34  E-value=9.9e-07  Score=74.06  Aligned_cols=113  Identities=18%  Similarity=0.184  Sum_probs=75.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCC-e-----EEEEecCCC-CCcc----chhhhcCCCceEEEe-cccCCcccCCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKN-E-----VIVVDNYFT-GSKD----NLRKWIGHPRFELIR-HDVTEPLLIEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~-~-----v~~~~r~~~-~~~~----~~~~~~~~~~~~~~~-~Dl~~~~~~~~d   99 (297)
                      .+||+||||+|++|++++..|...+.. +     ++++++... ...+    ++.. ...+-..-+. .+-....+.++|
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~-~~~~~~~~~~~~~~~~~~~~daD   81 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD-CALPLLKDVIATDKEEIAFKDLD   81 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH-TCCTTEEEEEEESCHHHHTTTCS
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh-hhhcccCCEEEcCCcHHHhCCCC
Confidence            489999999999999999999887632 4     888888531 0111    1111 1111121111 111123567999


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC---eEEEEec
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTST  147 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~v~~Ss  147 (297)
                      +||++||...  ....+..+.++.|+...+.+++.+++.+.   +++.+|-
T Consensus        82 vVvitAg~pr--kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           82 VAILVGSMPR--RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             EEEECCSCCC--CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            9999998543  33456778889999999999999999864   5666654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.33  E-value=1.6e-06  Score=68.36  Aligned_cols=73  Identities=21%  Similarity=0.328  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC----------------CchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-
Q 022414           31 SNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-   93 (297)
Q Consensus        31 ~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-   93 (297)
                      .+|+|+||||                ||.+|.++++.|+++| ++|+++.|+......     . ..++..+..+.... 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G-a~V~lv~~~~~~~~~-----~-~~~~~~~~v~s~~em   74 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG-YEVCLITTKRALKPE-----P-HPNLSIREITNTKDL   74 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT-CEEEEEECTTSCCCC-----C-CTTEEEEECCSHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC-CEEEEEeCCcccccc-----C-CCCeEEEEHhHHHHH
Confidence            4799999999                9999999999999999 999999996432110     0 12455554443221 


Q ss_pred             ------ccCCcCEEEEccCCCCC
Q 022414           94 ------LLIEVDQIYHLACPASP  110 (297)
Q Consensus        94 ------~~~~~d~vi~~a~~~~~  110 (297)
                            ...++|++||+|+....
T Consensus        75 ~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           75 LIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHhcCCCCEEEEcCccccc
Confidence                  23469999999997654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.32  E-value=3.2e-06  Score=61.86  Aligned_cols=94  Identities=18%  Similarity=0.193  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~  104 (297)
                      ++++|+|+|+ |.+|+.+++.|.+.| ++|++++++..    ..... .......+.+|..+..      ..++|+||++
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g-~~v~~~d~~~~----~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   77 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMG-HEVLAVDINEE----KVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVA   77 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTT-CCCEEEESCHH----HHHTT-TTTCSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCC-CEEEEEeCCHH----HHHHH-HHhCCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence            3578999998 999999999999999 89999988532    22211 1224456777776531      4579999998


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEec
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST  147 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss  147 (297)
                      ++..            ...    ...++..+++.+. +++..++
T Consensus        78 ~~~~------------~~~----~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           78 IGAN------------IQA----STLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             CCSC------------HHH----HHHHHHHHHHTTCSEEEEECC
T ss_pred             CCCc------------hHH----HHHHHHHHHHcCCCeEEEEeC
Confidence            7531            011    2246667777777 5555444

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.31  E-value=2.3e-06  Score=73.19  Aligned_cols=93  Identities=18%  Similarity=0.151  Sum_probs=64.3

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-----cCCcCEE
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQI  101 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~v  101 (297)
                      .+.-..|||+|+|| |++|+.+++.|.+ . ++|.+.+++..    .+.+.  ...+..+..|..|..     ..++|+|
T Consensus        11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~-~~v~~~~~~~~----~~~~~--~~~~~~~~~d~~d~~~l~~~~~~~DvV   81 (365)
T 3abi_A           11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-E-FDVYIGDVNNE----NLEKV--KEFATPLKVDASNFDKLVEVMKEFELV   81 (365)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHTT-T-SEEEEEESCHH----HHHHH--TTTSEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             cccCCccEEEEECC-CHHHHHHHHHHhc-C-CCeEEEEcCHH----HHHHH--hccCCcEEEecCCHHHHHHHHhCCCEE
Confidence            44456799999998 9999999999865 4 88988887532    22222  235667788887652     3579999


Q ss_pred             EEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEe
Q 022414          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS  146 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~S  146 (297)
                      |+++++.                  ....++++|.+.|+.++=+|
T Consensus        82 i~~~p~~------------------~~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           82 IGALPGF------------------LGFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             EECCCGG------------------GHHHHHHHHHHHTCEEEECC
T ss_pred             EEecCCc------------------ccchHHHHHHhcCcceEeee
Confidence            9998532                  13478899999998776554

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.29  E-value=7.8e-07  Score=77.11  Aligned_cols=95  Identities=15%  Similarity=0.241  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC--CeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc-----cC--CcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL-----LI--EVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~-----~~--~~d~  100 (297)
                      ||+|+|+|| |++|+.+++.|.+.|.  .+|.+.+|+.....+....+..  ..++..+.+|+++..     ..  ++|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            479999999 9999999999999984  3899988864332222111111  135788889998752     12  4899


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEE
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT  145 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~  145 (297)
                      |||++++..                  ...++++|.+.|++++-+
T Consensus        80 Vin~ag~~~------------------~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           80 VLNIALPYQ------------------DLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             EEECSCGGG------------------HHHHHHHHHHHTCCEEES
T ss_pred             EEECCCccc------------------ChHHHHHHHHhCCCEEEe
Confidence            999986421                  246777788888765543

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.26  E-value=8.4e-06  Score=59.59  Aligned_cols=69  Identities=20%  Similarity=0.250  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~  104 (297)
                      .+++|+|+|+ |++|+++++.|.+.| ++|++++++..    ...... ..++.++.+|.++..      ..++|+||.+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g-~~V~~id~~~~----~~~~~~-~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~   77 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAG-KKVLAVDKSKE----KIELLE-DEGFDAVIADPTDESFYRSLDLEGVSAVLIT   77 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTT-CCEEEEESCHH----HHHHHH-HTTCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC-CeEEEEECCHH----HHHHHH-HCCCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence            3578999997 999999999999999 99999998532    222221 235778889998762      3478999987


Q ss_pred             cC
Q 022414          105 AC  106 (297)
Q Consensus       105 a~  106 (297)
                      .+
T Consensus        78 ~~   79 (141)
T 3llv_A           78 GS   79 (141)
T ss_dssp             CS
T ss_pred             cC
Confidence            64

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.26  E-value=9.5e-07  Score=74.65  Aligned_cols=99  Identities=9%  Similarity=0.103  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcC-----CCeEEEEecCCCC-C-ccchhhhcCC-CceEEEecccCCcccCCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENE-----KNEVIVVDNYFTG-S-KDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g-----~~~v~~~~r~~~~-~-~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~d~vi  102 (297)
                      .+|||+|.||||++|+.+++.|++++     ..+++++.+.... . -......+.. ..+.+...|  .....++|+||
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~--~~~~~~~DvVf   85 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTE--AAVLGGHDAVF   85 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECC--HHHHTTCSEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCC--HHHhcCCCEEE
Confidence            35799999999999999999999887     5677777643211 1 1111011100 122222222  12334899999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      .|++...                  ...++..+ +.|+++|-+|+..-
T Consensus        86 ~alg~~~------------------s~~~~~~~-~~G~~vIDlSa~~R  114 (352)
T 2nqt_A           86 LALPHGH------------------SAVLAQQL-SPETLIIDCGADFR  114 (352)
T ss_dssp             ECCTTSC------------------CHHHHHHS-CTTSEEEECSSTTT
T ss_pred             ECCCCcc------------------hHHHHHHH-hCCCEEEEECCCcc
Confidence            9886432                  34666777 78899999998764

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=98.17  E-value=7.8e-06  Score=69.08  Aligned_cols=95  Identities=9%  Similarity=0.077  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCC-CceEEEecccCCcccCCcCEEEEccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGH-PRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~-~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ++||.|.||||++|+.+++.|.++...+++++.+..... ..+...   +.. ..+.+...|    ...++|+||.|++.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~~~~~~g~~~~~~~~~~----~~~~vDvV~~a~g~   78 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFVHPNLRGRTNLKFVPPE----KLEPADILVLALPH   78 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGTCGGGTTTCCCBCBCGG----GCCCCSEEEECCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHhCchhcCcccccccchh----HhcCCCEEEEcCCc
Confidence            579999999999999999999988746888877643221 111111   111 122222222    24689999998863


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      .                  ....++..+.+.|+++|-.|+..
T Consensus        79 ~------------------~s~~~a~~~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           79 G------------------VFAREFDRYSALAPVLVDLSADF  102 (345)
T ss_dssp             T------------------HHHHTHHHHHTTCSEEEECSSTT
T ss_pred             H------------------HHHHHHHHHHHCCCEEEEcCccc
Confidence            3                  24566677778899988888864

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.15  E-value=1.5e-05  Score=66.57  Aligned_cols=113  Identities=13%  Similarity=0.121  Sum_probs=76.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhhcC--CCceEEEecccCCcccCCcCEEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKWIG--HPRFELIRHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~~~--~~~~~~~~~Dl~~~~~~~~d~vi~  103 (297)
                      ...|||.|+|+ |++|..++..|+..|. .+|++++++......   ++.....  ...+.....|.  ..+.++|+||.
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~--~a~~~aDvVvi   79 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY--EDCKDADIVCI   79 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG--GGGTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH--HHhCCCCEEEE
Confidence            34689999996 9999999999999983 389999985322111   1221111  12344443333  35778999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      ++|...  ....+..+.+..|......+++.+.+..-  .++.+|-
T Consensus        80 ~ag~p~--kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           80 CAGANQ--KPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             CCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             ecccCC--CCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            998532  23345667789999999999999988764  5665553

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.12  E-value=7.8e-06  Score=64.27  Aligned_cols=69  Identities=17%  Similarity=0.209  Sum_probs=50.2

Q ss_pred             cCCCEEEEEcC----------------CchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc
Q 022414           30 QSNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP   93 (297)
Q Consensus        30 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   93 (297)
                      ..+|+|+||||                ||.+|.++++.|.++| ++|++++++..-.   .     ..+++.  .|+.+.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G-a~V~l~~~~~~l~---~-----~~g~~~--~dv~~~   74 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG-ANVTLVSGPVSLP---T-----PPFVKR--VDVMTA   74 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT-CEEEEEECSCCCC---C-----CTTEEE--EECCSH
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC-CEEEEEECCcccc---c-----CCCCeE--EccCcH
Confidence            46899999999                7999999999999999 9999988754111   0     113333  344332


Q ss_pred             ---------ccCCcCEEEEccCCCC
Q 022414           94 ---------LLIEVDQIYHLACPAS  109 (297)
Q Consensus        94 ---------~~~~~d~vi~~a~~~~  109 (297)
                               .+.++|++||+||...
T Consensus        75 ~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           75 LEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHHhcCCCCEEEECCcccC
Confidence                     2346999999999765

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.12  E-value=5.8e-05  Score=56.07  Aligned_cols=71  Identities=18%  Similarity=0.172  Sum_probs=50.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYH  103 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi~  103 (297)
                      ..+++|+|+|+ |.+|+.+++.|.+.| ++|++++|+....    .......+...+.+|..+.      ...++|+||.
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g-~~V~vid~~~~~~----~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~   90 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSG-HSVVVVDKNEYAF----HRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFA   90 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCGGGG----GGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCHHHH----HHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence            34689999995 999999999999999 8999999864322    1111123456666776542      1457999998


Q ss_pred             ccC
Q 022414          104 LAC  106 (297)
Q Consensus       104 ~a~  106 (297)
                      +.+
T Consensus        91 ~~~   93 (155)
T 2g1u_A           91 FTN   93 (155)
T ss_dssp             CSS
T ss_pred             EeC
Confidence            874

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=98.11  E-value=1.7e-05  Score=66.81  Aligned_cols=94  Identities=16%  Similarity=0.186  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC--CCeEEEEec-CCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDN-YFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g--~~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .|||+|.||||++|+.+++.|.+++  ..+++++.. ......-.    +....+.+...|.  ....++|+||.|.+..
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~----~~g~~i~~~~~~~--~~~~~~DvV~~a~g~~   79 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG----FAESSLRVGDVDS--FDFSSVGLAFFAAAAE   79 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE----ETTEEEECEEGGG--CCGGGCSEEEECSCHH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc----cCCcceEEecCCH--HHhcCCCEEEEcCCcH
Confidence            4789999999999999999999664  245665543 21111111    1111222222232  2345799999987521


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                                        ....++..+.+.|+++|.+|+.+
T Consensus        80 ------------------~s~~~a~~~~~aG~kvId~Sa~~  102 (340)
T 2hjs_A           80 ------------------VSRAHAERARAAGCSVIDLSGAL  102 (340)
T ss_dssp             ------------------HHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ------------------HHHHHHHHHHHCCCEEEEeCCCC
Confidence                              34567777888899988888765

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.10  E-value=1.8e-05  Score=58.68  Aligned_cols=72  Identities=15%  Similarity=0.205  Sum_probs=52.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi~~a  105 (297)
                      .++|+|+|+ |.+|+.+++.|.+.| ++|++++++.....+.+.... ..++.++.+|.++.      ...++|.|+.+.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g-~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRG-QNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCC-CCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            578999995 999999999999999 999999985321111222222 23688899998875      245799999876


Q ss_pred             C
Q 022414          106 C  106 (297)
Q Consensus       106 ~  106 (297)
                      +
T Consensus        80 ~   80 (153)
T 1id1_A           80 D   80 (153)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=98.06  E-value=2.3e-05  Score=66.60  Aligned_cols=99  Identities=13%  Similarity=0.141  Sum_probs=60.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC----------CceEEEecccCCcccC-CcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----------PRFELIRHDVTEPLLI-EVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~Dl~~~~~~-~~d~  100 (297)
                      ++||.|.||+|++|+.+++.|.+++..+|+++.++.......+......          ..+.+...|..+ ... ++|+
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv   86 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKH-EEFEDVDI   86 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTS-GGGTTCCE
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHH-HhcCCCCE
Confidence            4799999999999999999998876578888865322221112111110          011122223322 113 8999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      ||.|.+..                  ....++..+.+.|+++|-.|+..
T Consensus        87 V~~atp~~------------------~~~~~a~~~~~aG~~VId~s~~~  117 (354)
T 1ys4_A           87 VFSALPSD------------------LAKKFEPEFAKEGKLIFSNASAY  117 (354)
T ss_dssp             EEECCCHH------------------HHHHHHHHHHHTTCEEEECCSTT
T ss_pred             EEECCCch------------------HHHHHHHHHHHCCCEEEECCchh
Confidence            99987421                  34456667778899977777654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.04  E-value=1e-05  Score=71.14  Aligned_cols=105  Identities=19%  Similarity=0.240  Sum_probs=65.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~  104 (297)
                      ..+++|+|+|+ |++|+++++.|++.+..+|++.+|+..... .+..   ..++..+..|+.+.     ...++|+|||+
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~-~la~---~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~   95 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQ-ALAK---PSGSKAISLDVTDDSALDKVLADNDVVISL   95 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHH-HHHG---GGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHH-HHHH---hcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence            44689999997 999999999999983289999998642211 1111   12456667787654     23479999999


Q ss_pred             cCCCCCcccccChhhhHH-------Hh--HHHHHHHHHHHHHcCCeE
Q 022414          105 ACPASPIFYKYNPVKTIK-------TN--VIGTLNMLGLAKRVGARI  142 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~-------~n--~~~~~~l~~~~~~~~~r~  142 (297)
                      ++.....   .-...+++       .+  ......+++.|++.|+++
T Consensus        96 tp~~~~~---~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~  139 (467)
T 2axq_A           96 IPYTFHP---NVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITV  139 (467)
T ss_dssp             SCGGGHH---HHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEE
T ss_pred             CchhhhH---HHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEE
Confidence            8753210   00111111       11  123577888888888753

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=98.03  E-value=2.5e-05  Score=65.49  Aligned_cols=98  Identities=12%  Similarity=0.166  Sum_probs=63.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC--CCccchhh---hcCC-CceEEEec-ccCCccc-CCcCEEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRK---WIGH-PRFELIRH-DVTEPLL-IEVDQIYH  103 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~--~~~~~~~~---~~~~-~~~~~~~~-Dl~~~~~-~~~d~vi~  103 (297)
                      |+||.|.||||++|+.+++.|.++..+++..+..+..  .....+..   .+.. ....+... |.  ..+ .++|+||.
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~--~~~~~~~Dvvf~   81 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDI--SEFSPGVDVVFL   81 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSG--GGTCTTCSEEEE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCH--HHHhcCCCEEEE
Confidence            4799999999999999999999875478877755431  11111211   1111 12333332 22  233 68999998


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      |.+..                  ....++..+.+.|+++|-.|+.+
T Consensus        82 a~p~~------------------~s~~~~~~~~~~g~~vIDlSa~f  109 (337)
T 3dr3_A           82 ATAHE------------------VSHDLAPQFLEAGCVVFDLSGAF  109 (337)
T ss_dssp             CSCHH------------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred             CCChH------------------HHHHHHHHHHHCCCEEEEcCCcc
Confidence            87421                  34566666778899999999875

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=98.02  E-value=4.2e-05  Score=63.51  Aligned_cols=112  Identities=18%  Similarity=0.099  Sum_probs=75.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc-CC-CeEEEEecCCCCCccchhhhcCCC-ceEEE--ecccCCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN-EK-NEVIVVDNYFTGSKDNLRKWIGHP-RFELI--RHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~-g~-~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~--~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      |||.|+||+|.+|..++..|..+ +. .++++++... ........+.... .....  ..+-....+.++|+||.+||.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~   79 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV   79 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCC
Confidence            79999999999999999999875 42 5889998865 2111111111111 22222  111122356899999999985


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      ..  ....+..+.++.|....+.+++.+.+..-  .++.+|-
T Consensus        80 ~r--kpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           80 AR--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             SC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            43  34456778889999999999999988754  5666653

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.00  E-value=1.2e-05  Score=67.73  Aligned_cols=114  Identities=13%  Similarity=0.192  Sum_probs=73.4

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhh-cCCCceEEEecccCCcccCCcCEEEE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKW-IGHPRFELIRHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~-~~~~~~~~~~~Dl~~~~~~~~d~vi~  103 (297)
                      .+++|||.|+|++|++|..++..|+..|. .+|++++........   ++... +....+.+ ..|. ..++.++|+||.
T Consensus         5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t~d~-~~al~dADvVvi   82 (343)
T 3fi9_A            5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-TSDI-KEALTDAKYIVS   82 (343)
T ss_dssp             CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-ESCH-HHHHTTEEEEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-cCCH-HHHhCCCCEEEE
Confidence            34578999999999999999999999884 589999885321111   11111 11112222 1222 124678999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--e-EEEEe
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--R-ILLTS  146 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r-~v~~S  146 (297)
                      +||...  ....+..+.+..|....+.+++.+.+.+-  . ++.+|
T Consensus        83 taG~p~--kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           83 SGGAPR--KEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             CCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             ccCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            998532  33455667789999999999999988764  3 55554

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=98.00  E-value=2.4e-05  Score=66.26  Aligned_cols=99  Identities=10%  Similarity=0.126  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC----------CceEEEecccCCcccCCcCE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----------PRFELIRHDVTEPLLIEVDQ  100 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~Dl~~~~~~~~d~  100 (297)
                      +++||.|.||+|++|+.+++.|.++...+++++..+.......+......          ..+.+...|.  ....++|+
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~vDv   80 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNY--EDHKDVDV   80 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSG--GGGTTCSE
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCH--HHhcCCCE
Confidence            35799999999999999999998876568888752111111112111110          1122322222  22357999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      ||.|.+.                  .....++..+.+.|+++|-.|+.+
T Consensus        81 Vf~atp~------------------~~s~~~a~~~~~aG~~VId~s~~~  111 (350)
T 2ep5_A           81 VLSALPN------------------ELAESIELELVKNGKIVVSNASPF  111 (350)
T ss_dssp             EEECCCH------------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             EEECCCh------------------HHHHHHHHHHHHCCCEEEECCccc
Confidence            9987642                  135567788888999977777754

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.97  E-value=2.3e-05  Score=63.91  Aligned_cols=73  Identities=14%  Similarity=0.258  Sum_probs=42.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC--ccchhhhcC--CCceEEEecccCCcccCCcCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--KDNLRKWIG--HPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ..|||.|+|++|.+|+.+++.+.+....+++++.+.....  .........  ...+.. ..|+ +..+.++|+||+++
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~-~~dl-~~~l~~~DvVIDft   80 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV-QSSL-DAVKDDFDVFIDFT   80 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE-ESCS-TTTTTSCSEEEECS
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCcee-cCCH-HHHhcCCCEEEEcC
Confidence            3589999999999999999998865337877554432211  111111111  112221 2333 23334799999877

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.96  E-value=7.9e-05  Score=63.10  Aligned_cols=95  Identities=15%  Similarity=0.227  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC--CeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      ++||.|.||||++|..|++.|.+++.  .++..+....... ..+.  +.  +.+....++....+.++|+||.|++.. 
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG-~~~~--~~--~~~~~~~~~~~~~~~~~Dvvf~a~~~~-   75 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAG-KSLK--FK--DQDITIEETTETAFEGVDIALFSAGSS-   75 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTT-CEEE--ET--TEEEEEEECCTTTTTTCSEEEECSCHH-
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCC-Ccce--ec--CCCceEeeCCHHHhcCCCEEEECCChH-
Confidence            47999999999999999999988751  2444444321111 1111  11  122222233333456899999987521 


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                                       .....+..+.+.|+++|=.|+..
T Consensus        76 -----------------~s~~~a~~~~~~G~~vIDlSa~~   98 (366)
T 3pwk_A           76 -----------------TSAKYAPYAVKAGVVVVDNTSYF   98 (366)
T ss_dssp             -----------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred             -----------------hHHHHHHHHHHCCCEEEEcCCcc
Confidence                             34566666778899998888865

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.96  E-value=7.6e-05  Score=62.78  Aligned_cols=95  Identities=13%  Similarity=0.162  Sum_probs=61.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      ++||.|.||+|++|+.+++.|.++  ...+++++........ .+.  +....+.+...|.  ....++|+||.|.+.. 
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~-~~~--~~~~~i~~~~~~~--~~~~~vDvVf~a~g~~-   76 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGK-TYR--FNGKTVRVQNVEE--FDWSQVHIALFSAGGE-   76 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTC-EEE--ETTEEEEEEEGGG--CCGGGCSEEEECSCHH-
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCC-cee--ecCceeEEecCCh--HHhcCCCEEEECCCch-
Confidence            589999999999999999999988  3357777763211111 111  1112333333332  2345799999987521 


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                                       .....+..+.+.|+++|-.|+.+
T Consensus        77 -----------------~s~~~a~~~~~~G~~vId~s~~~   99 (336)
T 2r00_A           77 -----------------LSAKWAPIAAEAGVVVIDNTSHF   99 (336)
T ss_dssp             -----------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred             -----------------HHHHHHHHHHHcCCEEEEcCCcc
Confidence                             35566777778899888888874

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.91  E-value=7.2e-05  Score=62.45  Aligned_cols=111  Identities=13%  Similarity=0.068  Sum_probs=73.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCCCCcc---chhhhc--CCCceEEE-ecccCCcccCCcCEEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKD---NLRKWI--GHPRFELI-RHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~---~~~~~~--~~~~~~~~-~~Dl~~~~~~~~d~vi~  103 (297)
                      ++|||.|+|+ |.+|..++..|...| . +|++++++......   .+....  ......+. ..|.  .++.++|+||.
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~-~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~--~a~~~aDiVIi   81 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKE-LGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY--AAIEGADVVIV   81 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG--GGGTTCSEEEE
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCC-CCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH--HHHCCCCEEEE
Confidence            4689999998 999999999999998 6 99999986533211   111110  01122222 2343  56789999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      ++|...  ....+..+.+..|....+.+++.+.+.+-  .++.+|-
T Consensus        82 aag~p~--k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           82 TAGVPR--KPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             CCSCCC--C-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ccCcCC--CCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            997543  23345567788899999999999988764  5666654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.91  E-value=3.8e-05  Score=63.27  Aligned_cols=109  Identities=17%  Similarity=0.079  Sum_probs=75.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCC--eEEEEecCCCCCcc---chhhhc--CCCceEEE-ecccCCcccCCcCEEEEc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKD---NLRKWI--GHPRFELI-RHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~---~~~~~~--~~~~~~~~-~~Dl~~~~~~~~d~vi~~  104 (297)
                      |||.|+|+ |.+|..++..|...| .  +|.+++++......   .+....  -....++. ..|  ..++.++|+||.+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~-~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d--~~a~~~aDiVVia   76 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD--YSLLKGSEIIVVT   76 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC--GGGGTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC--HHHhCCCCEEEEC
Confidence            79999999 999999999999998 5  89999986533210   111111  01122232 223  4567899999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      +|...  ....+..+.+..|....+.+++.+.+.+-  .++.+|-
T Consensus        77 ag~~~--kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           77 AGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             CCCCC--CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             CCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            98542  23345677889999999999999988763  5666663

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.90  E-value=4e-05  Score=63.80  Aligned_cols=111  Identities=16%  Similarity=0.099  Sum_probs=75.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCC-CCCcc----chhh---hcC-CCceEEEecccCCcccCCcC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYF-TGSKD----NLRK---WIG-HPRFELIRHDVTEPLLIEVD   99 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~-~~~~~----~~~~---~~~-~~~~~~~~~Dl~~~~~~~~d   99 (297)
                      +..+||.|+|+ |.+|..++..|...| . +|++++++. ....+    .+..   ... ...+.. ..|  ...+.++|
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g-~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d--~~a~~~aD   80 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKE-LADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD--YADTADSD   80 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC--GGGGTTCS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCC-CCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC--HHHhCCCC
Confidence            34689999996 999999999999999 7 999999863 11111    1111   111 112222 122  24578899


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      +||.++|...  ....+..+.+..|....+.+++.+.+.+-  .++.+|-
T Consensus        81 vVIiaag~p~--kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           81 VVVITAGIAR--KPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             EEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            9999998543  33455677889999999999999988754  5666663

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.89  E-value=6.5e-05  Score=63.13  Aligned_cols=113  Identities=15%  Similarity=0.076  Sum_probs=74.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC------CeEEEEecCCCCCc-c----chhhhcCCCc-eEEEecccCCcccCCcC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK------NEVIVVDNYFTGSK-D----NLRKWIGHPR-FELIRHDVTEPLLIEVD   99 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~------~~v~~~~r~~~~~~-~----~~~~~~~~~~-~~~~~~Dl~~~~~~~~d   99 (297)
                      ..||.|+||+|.||+.++..|.....      .++.+++....... +    ++.. ...+. ......+-...++.++|
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~-~~~~~~~~~~~~~~~~~a~~~ad  102 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELED-CAFPLLDKVVVTADPRVAFDGVA  102 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH-TTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhh-cCccCCCcEEEcCChHHHhCCCC
Confidence            46999999999999999998876542      26888887432110 1    1111 11121 22222222234578999


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEec
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTST  147 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss  147 (297)
                      +||.+||...  ....+..+.++.|..-.+.+.+.+.+..   ++++.+|-
T Consensus       103 vVvi~aG~pr--kpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A          103 IAIMCGAFPR--KAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             EEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEECCCCCC--CCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            9999998643  4456778899999999999999998753   36666653

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.89  E-value=5.1e-05  Score=64.65  Aligned_cols=99  Identities=9%  Similarity=0.071  Sum_probs=60.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCC-------CceEEEecccCCc-ccCCcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGH-------PRFELIRHDVTEP-LLIEVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~-------~~~~~~~~Dl~~~-~~~~~d~  100 (297)
                      ++||.|.||||++|.++++.|.++...++..+.-+....-..+...   +..       ....+.  ++... .+.++|+
T Consensus        19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~--~~~~~~~~~~~Dv   96 (381)
T 3hsk_A           19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQ--ECKPEGNFLECDV   96 (381)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCE--ESSSCTTGGGCSE
T ss_pred             ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEE--eCchhhhcccCCE
Confidence            4789999999999999999888876467765532211111111111   100       012222  22222 3468999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      ||.|.+..                  ....++..+.+.|+++|=.|+.+=
T Consensus        97 vf~alp~~------------------~s~~~~~~~~~~G~~VIDlSa~fR  128 (381)
T 3hsk_A           97 VFSGLDAD------------------VAGDIEKSFVEAGLAVVSNAKNYR  128 (381)
T ss_dssp             EEECCCHH------------------HHHHHHHHHHHTTCEEEECCSTTT
T ss_pred             EEECCChh------------------HHHHHHHHHHhCCCEEEEcCCccc
Confidence            99987421                  345666677788999998888753

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.88  E-value=6.5e-05  Score=59.20  Aligned_cols=67  Identities=13%  Similarity=0.250  Sum_probs=50.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi~~a  105 (297)
                      |+|+|+|+ |.+|+++++.|.+.| ++|++++++..    ....+....++.++.+|.++.      ...++|++|.+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g-~~v~vid~~~~----~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRK-YGVVIINKDRE----LCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTT-CCEEEEESCHH----HHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCHH----HHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence            78999996 999999999999999 99999998532    222221123577889998875      245799999765

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.87  E-value=4.3e-05  Score=63.78  Aligned_cols=114  Identities=12%  Similarity=0.128  Sum_probs=65.5

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhhcC-CCceEEEecccCCcccCCcCEEE
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKWIG-HPRFELIRHDVTEPLLIEVDQIY  102 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~~~-~~~~~~~~~Dl~~~~~~~~d~vi  102 (297)
                      .+..+|||.|+|+ |.+|..++..|+..+. .++.+++++......   .+..... ...+.....|  ..++.++|+||
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--~~a~~~aDiVv   81 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--YSDAKDADLVV   81 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--GGGGTTCSEEE
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--HHHhcCCCEEE
Confidence            3456799999996 9999999999999883 389999885322111   1111110 1234443333  24578999999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ++||...  ....+..+.++.|....+.+++.+.+..-  .++.+|
T Consensus        82 i~ag~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           82 ITAGAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             ECCCCC------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             ECCCCCC--CCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            9998532  23345667788899999999999988764  566555

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.87  E-value=3e-05  Score=65.83  Aligned_cols=96  Identities=15%  Similarity=0.228  Sum_probs=60.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCc-eEEEecccCCcccCCcCEEEEccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPR-FELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~-~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      .+||+|.||+|++|+.+++.|.++...+++++.+..... ..+...   +.... .++...+  +....++|+||.|++.
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~~~~~~v~~dl~~~~--~~~~~~vDvVf~atp~   92 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFPHLRAQKLPTLVSVK--DADFSTVDAVFCCLPH   92 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCGGGTTSCCCCCBCGG--GCCGGGCSEEEECCCT
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCchhcCcccccceecc--hhHhcCCCEEEEcCCc
Confidence            479999999999999999999988756888877643211 111111   11000 0111111  2223479999998864


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      ..                  ....+..+ +.|+++|-.|+..
T Consensus        93 ~~------------------s~~~a~~~-~aG~~VId~sa~~  115 (359)
T 1xyg_A           93 GT------------------TQEIIKEL-PTALKIVDLSADF  115 (359)
T ss_dssp             TT------------------HHHHHHTS-CTTCEEEECSSTT
T ss_pred             hh------------------HHHHHHHH-hCCCEEEECCccc
Confidence            32                  34566667 7888888888854

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.86  E-value=0.0002  Score=60.20  Aligned_cols=94  Identities=17%  Similarity=0.098  Sum_probs=60.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC--CCeEEEEecCC-CCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ++||.|.||||++|..+++.|.++.  ..++..+.... ....-.    +.  +.+...-++......++|+||.|.+..
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~----~~--~~~~~~~~~~~~~~~~~Dvvf~a~~~~   74 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA----FR--GQEIEVEDAETADPSGLDIALFSAGSA   74 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE----ET--TEEEEEEETTTSCCTTCSEEEECSCHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee----ec--CCceEEEeCCHHHhccCCEEEECCChH
Confidence            4789999999999999999998874  23455554322 111111    11  122333333344456899999987521


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                                        .....+..+.+.|+++|=.|+..
T Consensus        75 ------------------~s~~~a~~~~~~G~~vID~Sa~~   97 (344)
T 3tz6_A           75 ------------------MSKVQAPRFAAAGVTVIDNSSAW   97 (344)
T ss_dssp             ------------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ------------------HHHHHHHHHHhCCCEEEECCCcc
Confidence                              34566666778899988888865

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.85  E-value=0.00021  Score=59.64  Aligned_cols=110  Identities=15%  Similarity=0.068  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCCCCcc---chhhhc--CCCceEEE-ecccCCcccCCcCEEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKD---NLRKWI--GHPRFELI-RHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~---~~~~~~--~~~~~~~~-~~Dl~~~~~~~~d~vi~  103 (297)
                      .+|||.|+|+ |.+|..++..|...+ . +|.+++++......   .+....  ......+. ..|  ..++.++|+||.
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~-~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d--~~a~~~aDvVIi   79 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQ-LGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND--YKDLENSDVVIV   79 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC--GGGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC--HHHHCCCCEEEE
Confidence            3589999995 999999999999988 6 89999986533211   111110  00122222 233  246789999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ++|...  ....+..+.+..|....+.+++.+.+..-  .++.+|
T Consensus        80 ~ag~p~--k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           80 TAGVPR--KPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             CCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             cCCcCC--CCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            998543  23345667788899999999999988764  566664

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.85  E-value=7.7e-05  Score=61.29  Aligned_cols=109  Identities=18%  Similarity=0.113  Sum_probs=75.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhh---cCCCceEEE-ecccCCcccCCcCEEEEc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKW---IGHPRFELI-RHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~---~~~~~~~~~-~~Dl~~~~~~~~d~vi~~  104 (297)
                      |||.|+|| |.+|+.++..|..++. .++.+++........   ++...   +. ...... ..|.  ..+.+.|+|+..
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~-~~~~i~~~~d~--~~~~~aDvVvit   76 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGID-KYPKIVGGADY--SLLKGSEIIVVT   76 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGT-CCCEEEEESCG--GGGTTCSEEEEC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCC-CCCeEecCCCH--HHhCCCCEEEEe
Confidence            89999995 9999999999988874 589998875421111   11111   11 112222 2233  356889999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      ||...  ....+..+.++.|..-.+.+.+.+.+.+-  .++.+|-
T Consensus        77 AG~pr--kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           77 AGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             CCCCC--CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             cCCCC--CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            98543  44567888899999999999999988764  4555543

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.84  E-value=0.00021  Score=59.72  Aligned_cols=110  Identities=16%  Similarity=0.152  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCC----CceEEEecccCCcccCCcCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      +.|||.|+|+ |++|..++..|+..+. .+|.+++.+..........+...    ..+.+...|  ..++.++|+||.++
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~--~~a~~~aDvVii~~   82 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD--YSDVKDCDVIVVTA   82 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C--GGGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECC--HHHhCCCCEEEEcC
Confidence            4589999998 9999999999999882 28999998753322211111110    133333222  34578999999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEE
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLT  145 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~  145 (297)
                      +...  ....+..+.+..|+.....+++.+.+..-  .++.+
T Consensus        83 g~p~--k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           83 GANR--KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             CC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             CCCC--CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            7543  22334556778899999999999988643  45554

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.77  E-value=0.00021  Score=59.41  Aligned_cols=111  Identities=14%  Similarity=0.131  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-----CCceEEEe-cccCCcccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-----HPRFELIR-HDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~Dl~~~~~~~~d~vi~~a  105 (297)
                      +|||.|+|| |++|..++..|...|..+|.+++++..........+..     ........ .|.  .++.++|+||.++
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--~a~~~aD~Vi~a~   78 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY--ADTANSDVIVVTS   78 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG--GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH--HHHCCCCEEEEcC
Confidence            479999998 99999999999999843788888764322111111111     11222222 444  4578999999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEec
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST  147 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss  147 (297)
                      |....  ......+....|....+.+.+.+.+.+. .++.+.|
T Consensus        79 g~p~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           79 GAPRK--PGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             CC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            75432  2223345567788888899998888754 3443333

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.74  E-value=0.00021  Score=59.78  Aligned_cols=113  Identities=14%  Similarity=0.116  Sum_probs=76.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhhcC-CCceEEE-ecccCCcccCCcCEEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKWIG-HPRFELI-RHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~~~-~~~~~~~-~~Dl~~~~~~~~d~vi~  103 (297)
                      ...+||.|+|+ |.+|..++..|+..|. .++++++++......   ++..... ......+ ..|..  .+.++|+||.
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~--~~~~aDiVvi   93 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS--VTANSKLVII   93 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG--GGTTEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH--HhCCCCEEEE
Confidence            34699999997 9999999999999883 389999885321111   1111110 0111222 23442  5789999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      +||...  ....+..+.++.|....+.+++.+.+..-  .++.+|-
T Consensus        94 ~aG~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           94 TAGARQ--QEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             CCSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ccCCCC--CCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            998543  34456778899999999999999988753  5666653

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.74  E-value=8.5e-05  Score=62.30  Aligned_cols=93  Identities=17%  Similarity=0.108  Sum_probs=56.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC--CeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~  110 (297)
                      |||.|.||+|++|+.+++.|.++++  .++..+.... .....+.  +....+.+...|..  .. ++|+||.|.|..  
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~-~~g~~l~--~~g~~i~v~~~~~~--~~-~~DvV~~a~g~~--   72 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPR-SAGVRLA--FRGEEIPVEPLPEG--PL-PVDLVLASAGGG--   72 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGG-GSSCEEE--ETTEEEEEEECCSS--CC-CCSEEEECSHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccc-cCCCEEE--EcCceEEEEeCChh--hc-CCCEEEECCCcc--
Confidence            6899999999999999999997651  2333322111 0001111  11123444444432  24 899999987521  


Q ss_pred             cccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                                      .....+..+.+.|+++|-.|+.+
T Consensus        73 ----------------~s~~~a~~~~~~G~~vId~s~~~   95 (331)
T 2yv3_A           73 ----------------ISRAKALVWAEGGALVVDNSSAW   95 (331)
T ss_dssp             ----------------HHHHHHHHHHHTTCEEEECSSSS
T ss_pred             ----------------chHHHHHHHHHCCCEEEECCCcc
Confidence                            34455666677899988888874

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.73  E-value=7.4e-05  Score=63.26  Aligned_cols=99  Identities=13%  Similarity=0.136  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC------C----CceEEEecccCCcccCCcCE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG------H----PRFELIRHDVTEPLLIEVDQ  100 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~------~----~~~~~~~~Dl~~~~~~~~d~  100 (297)
                      +.+||.|.||||++|..+++.|.++...++..+....... ..+.....      .    ....+...|.  ..+.++|+
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saG-k~~~~~~p~~~~~~~~~~~~~~~v~~~~~--~~~~~vDv   82 (359)
T 4dpk_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVG-KPYGEVVRWQTVGQVPKEIADMEIKPTDP--KLMDDVDI   82 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTT-SBHHHHCCCCSSSCCCHHHHTCBCEECCG--GGCTTCCE
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcC-CChhHhcccccccccccccccceEEeCCH--HHhcCCCE
Confidence            3578999999999999999988777646777665432211 11211100      0    0122222222  23468999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      ||.|.+..                  ....++..+.+.|+++|-+|+.+=
T Consensus        83 vf~a~p~~------------------~s~~~a~~~~~~G~~vIDlSa~~R  114 (359)
T 4dpk_A           83 IFSPLPQG------------------AAGPVEEQFAKEGFPVISNSPDHR  114 (359)
T ss_dssp             EEECCCTT------------------THHHHHHHHHHTTCEEEECSSTTT
T ss_pred             EEECCChH------------------HHHHHHHHHHHCCCEEEEcCCCcc
Confidence            99987643                  244566666788999999998753

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.73  E-value=7.4e-05  Score=63.26  Aligned_cols=99  Identities=13%  Similarity=0.136  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC------C----CceEEEecccCCcccCCcCE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG------H----PRFELIRHDVTEPLLIEVDQ  100 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~------~----~~~~~~~~Dl~~~~~~~~d~  100 (297)
                      +.+||.|.||||++|..+++.|.++...++..+....... ..+.....      .    ....+...|.  ..+.++|+
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saG-k~~~~~~p~~~~~~~~~~~~~~~v~~~~~--~~~~~vDv   82 (359)
T 4dpl_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVG-KPYGEVVRWQTVGQVPKEIADMEIKPTDP--KLMDDVDI   82 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTT-SBHHHHCCCCSSSCCCHHHHTCBCEECCG--GGCTTCCE
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcC-CChhHhcccccccccccccccceEEeCCH--HHhcCCCE
Confidence            3578999999999999999988777646777665432211 11211100      0    0122222222  23468999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      ||.|.+..                  ....++..+.+.|+++|-+|+.+=
T Consensus        83 vf~a~p~~------------------~s~~~a~~~~~~G~~vIDlSa~~R  114 (359)
T 4dpl_A           83 IFSPLPQG------------------AAGPVEEQFAKEGFPVISNSPDHR  114 (359)
T ss_dssp             EEECCCTT------------------THHHHHHHHHHTTCEEEECSSTTT
T ss_pred             EEECCChH------------------HHHHHHHHHHHCCCEEEEcCCCcc
Confidence            99987643                  244566666788999999998753

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.72  E-value=0.00019  Score=59.80  Aligned_cols=112  Identities=14%  Similarity=0.031  Sum_probs=75.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhhcC-CCceEEE-ecccCCcccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKWIG-HPRFELI-RHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~~~-~~~~~~~-~~Dl~~~~~~~~d~vi~~  104 (297)
                      +.+||.|+|+ |.+|..++..|+..|. .+|++++++......   ++..... ....... ..|..  .+.++|+||.+
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~--~~~daDiVIit   96 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS--VSAGSKLVVIT   96 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC--SCSSCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH--HhCCCCEEEEe
Confidence            4689999998 9999999999999983 389999885432111   1111111 0111222 24543  37899999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      ||...  ....+..+.+..|....+.+++.+.+.+-  .++.+|-
T Consensus        97 aG~p~--kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           97 AGARQ--QEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             CSCCC--CSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            98543  33455667788899999999999988753  5666553

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.71  E-value=0.00026  Score=58.85  Aligned_cols=111  Identities=13%  Similarity=0.050  Sum_probs=72.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhhc--CCCceEEEecccCCcccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKWI--GHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~~--~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      |||.|+|+ |.+|..++..|+..+. .+|++++++......   ++....  ........-.|. ..++.++|+||.++|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~-~~a~~~aDvVii~ag   78 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND-YGPTEDSDVCIITAG   78 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS-SGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC-HHHhCCCCEEEECCC
Confidence            79999996 9999999999999883 389999986532211   111110  011223321222 346789999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      ...  ....+..+.+..|....+.+++.+.+.+-  .++.+|-
T Consensus        79 ~~~--kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           79 LPR--SPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             C---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             CCC--CCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            542  23345667889999999999999988763  5665553

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.66  E-value=0.0001  Score=59.94  Aligned_cols=94  Identities=21%  Similarity=0.400  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCCC-ccchhhhcCC-CceEEEecccCCcccCCcCEEEEccCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGS-KDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~-~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      .++||.|+|++|.+|+.+++.+.+....++++. +|+.... ......+... .++.. ..|+. ..+.++|+||.+..+
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v-~~dl~-~ll~~~DVVIDfT~p   83 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVAL-TDDIE-RVCAEADYLIDFTLP   83 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBC-BCCHH-HHHHHCSEEEECSCH
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCcee-cCCHH-HHhcCCCEEEEcCCH
Confidence            368999999999999999999988754777774 5543211 1111111111 12211 12221 123368999987621


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEE
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL  144 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~  144 (297)
                                        ......++.|.+.|+++|.
T Consensus        84 ------------------~a~~~~~~~al~~G~~vVi  102 (272)
T 4f3y_A           84 ------------------EGTLVHLDAALRHDVKLVI  102 (272)
T ss_dssp             ------------------HHHHHHHHHHHHHTCEEEE
T ss_pred             ------------------HHHHHHHHHHHHcCCCEEE
Confidence                              1345666777777777664

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.60  E-value=0.00035  Score=58.62  Aligned_cols=112  Identities=13%  Similarity=0.064  Sum_probs=71.6

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCCCCcc---chhhh---cC-CCceEEEecccCCcccCCcC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKD---NLRKW---IG-HPRFELIRHDVTEPLLIEVD   99 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~---~~~~~---~~-~~~~~~~~~Dl~~~~~~~~d   99 (297)
                      +..+.|||.|+|| |.+|..++..|...| + +|.+++++......   .+...   +. ..++.. ..|+. .++.++|
T Consensus         5 ~~~~~~kI~VIGa-G~vG~~lA~~la~~g-~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~~-ea~~~aD   80 (331)
T 1pzg_A            5 LVQRRKKVAMIGS-GMIGGTMGYLCALRE-LADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-EYSYE-AALTGAD   80 (331)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHT-CCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-ECSHH-HHHTTCS
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhCC-CCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-eCCHH-HHhCCCC
Confidence            3344589999998 999999999999999 5 89999986532221   11111   11 112222 13432 2567899


Q ss_pred             EEEEccCCCCCccccc-----ChhhhHHHhHHHHHHHHHHHHHcCC--eEEEE
Q 022414          100 QIYHLACPASPIFYKY-----NPVKTIKTNVIGTLNMLGLAKRVGA--RILLT  145 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~  145 (297)
                      +||.++|....  ...     +..+....|....+.+++.+.+..-  .++.+
T Consensus        81 iVi~a~g~p~~--~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~  131 (331)
T 1pzg_A           81 CVIVTAGLTKV--PGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV  131 (331)
T ss_dssp             EEEECCSCSSC--TTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEEEccCCCCC--CCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence            99999975432  112     3455677788888888888887643  44433

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.59  E-value=0.00045  Score=57.80  Aligned_cols=112  Identities=12%  Similarity=0.120  Sum_probs=72.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcC----CCceEEEecccCCcccCCcCEEEEc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~d~vi~~  104 (297)
                      .+.|||.|+|| |.+|..++..|+..+. .++.++++...........+..    ...+.+.. | ...++.++|+||.+
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~-~~~a~~~aDvVii~   83 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A-EYSDAKDADLVVIT   83 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C-CGGGGGGCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C-CHHHhCCCCEEEEc
Confidence            34589999998 9999999999988872 3899998853221111111111    02333332 3 23457899999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ++...  ....+..+.+..|+.....+++.+.+..-  .++.+|
T Consensus        84 ag~~~--k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           84 AGAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             CCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            97543  22344556778899999999998888753  566553

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.56  E-value=0.001  Score=55.33  Aligned_cols=108  Identities=15%  Similarity=0.067  Sum_probs=69.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEecCCCCCccchhhhcC-----CCceEEEe-cccCCcccCCcCEEEEc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIG-----HPRFELIR-HDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~Dl~~~~~~~~d~vi~~  104 (297)
                      |||.|+|+ |.+|..++..|...  + ++|++++++..........+..     .....+.. .|..  .+.++|+||.+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g-~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~--~l~~aDvViia   76 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLA-RELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYA--DTANSDIVIIT   76 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC-SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGG--GGTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC-CEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHH--HHCCCCEEEEe
Confidence            68999998 99999999999885  6 8999999975322211000110     01222222 3442  36789999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ++...  .......+.+..|......+++.+.+...  +++.+|
T Consensus        77 v~~p~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           77 AGLPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             CSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            86422  22333556777888888899988887753  555553

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.55  E-value=0.00076  Score=51.38  Aligned_cols=69  Identities=17%  Similarity=0.178  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-------ccCCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-------LLIEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------~~~~~d~vi  102 (297)
                      .+++|+|+| .|.+|..+++.|.+. | ++|++++++...    ..... ..++..+.+|.++.       ...++|.||
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g-~~V~vid~~~~~----~~~~~-~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYG-KISLGIEIREEA----AQQHR-SEGRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHC-SCEEEEESCHHH----HHHHH-HTTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccC-CeEEEEECCHHH----HHHHH-HCCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            468899999 599999999999999 9 999999985422    22211 23566777777653       145789999


Q ss_pred             EccC
Q 022414          103 HLAC  106 (297)
Q Consensus       103 ~~a~  106 (297)
                      .+.+
T Consensus       111 ~~~~  114 (183)
T 3c85_A          111 LAMP  114 (183)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            8763

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.54  E-value=0.00024  Score=51.70  Aligned_cols=67  Identities=16%  Similarity=0.178  Sum_probs=51.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~a  105 (297)
                      .++|+|+|. |.+|+.+++.|.+.| ++|++++++..    ...... ..++..+.+|.++..      ..++|.+|.+.
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g-~~v~vid~~~~----~~~~~~-~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASD-IPLVVIETSRT----RVDELR-ERGVRAVLGNAANEEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTT-CCEEEEESCHH----HHHHHH-HTTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCC-CCEEEEECCHH----HHHHHH-HcCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence            478999995 999999999999999 99999998542    222221 247788899988762      34689998776

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.53  E-value=0.00049  Score=57.08  Aligned_cols=108  Identities=17%  Similarity=0.163  Sum_probs=64.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCC--eEEEEecCCCCCccchhhhcCC----CceEEEecccCCcccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      |||.|+|+ |.+|..++..|...| +  +|++++++..........+...    ........|  ..++.++|+||.+++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g-~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~--~~a~~~aDvVIi~~~   76 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRG-SCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG--HSELADAQVVILTAG   76 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC--GGGGTTCSEEEECC-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC--HHHhCCCCEEEEcCC
Confidence            68999998 999999999999998 6  9999998642111111111100    122222223  235678999999987


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ....  ...+..+.+..|......+++.+.+..-  .++.+|
T Consensus        77 ~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           77 ANQK--PGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             CCCC--CCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            4331  2233445667888888888888877643  455443

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.52  E-value=0.0013  Score=54.84  Aligned_cols=110  Identities=13%  Similarity=0.110  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc---chhhhcC--CCceEEEe-cccCCcccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKWIG--HPRFELIR-HDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---~~~~~~~--~~~~~~~~-~Dl~~~~~~~~d~vi~~a  105 (297)
                      .|||.|+|| |.+|..++..|...|..+|++++++......   .+.....  .....+.. .|+  .++.++|+||.++
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~--~al~~aD~Vi~a~   80 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY--DDLAGADVVIVTA   80 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG--GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH--HHhCCCCEEEEeC
Confidence            579999998 9999999999999993278888886432211   1111100  01222222 444  4578999999999


Q ss_pred             CCCCCcccccC-----hhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          106 CPASPIFYKYN-----PVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       106 ~~~~~~~~~~~-----~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      +....  ....     ..+....|....+.+.+.+.+..-  .++.+|
T Consensus        81 g~p~k--~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           81 GFTKA--PGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             SCSSC--TTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCC--CCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            75431  1112     345567788888888888777643  555443

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.51  E-value=0.00049  Score=57.39  Aligned_cols=110  Identities=13%  Similarity=0.117  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhhc-CCCceEEEecccCCcccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKWI-GHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~~-~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      .|||.|+|| |.+|..++..|+..+. .++.+++++......   .+.... ....+.+.. | ...++.++|+||.+++
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~-~~~a~~~aDvVii~ag   81 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G-EYSDCKDADLVVITAG   81 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C-CGGGGTTCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C-CHHHhCCCCEEEECCC
Confidence            489999998 9999999999998872 389999985322111   111110 012333332 3 2346789999999997


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ....  ...+..+.+..|......+++.+.+.+-  .++.+|
T Consensus        82 ~~~~--~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           82 APQK--PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             C------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            5432  2234456678899999999999988754  566553

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.48  E-value=0.00018  Score=58.72  Aligned_cols=75  Identities=19%  Similarity=0.264  Sum_probs=48.7

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ...+++++|+|+ |.+|++++..|.+.| .+|++.+|+..+. +.+.+.+.. ..+..  .|+.+....++|+||++++.
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G-~~V~v~~R~~~~~-~~la~~~~~~~~~~~--~~~~~~~~~~~DivVn~t~~  190 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLD-CAVTITNRTVSRA-EELAKLFAHTGSIQA--LSMDELEGHEFDLIINATSS  190 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSHHHH-HHHHHHTGGGSSEEE--CCSGGGTTCCCSEEEECCSC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcC-CEEEEEECCHHHH-HHHHHHhhccCCeeE--ecHHHhccCCCCEEEECCCC
Confidence            346799999998 779999999999999 9999999864322 122222111 12222  22211100479999999975


Q ss_pred             C
Q 022414          108 A  108 (297)
Q Consensus       108 ~  108 (297)
                      .
T Consensus       191 ~  191 (271)
T 1nyt_A          191 G  191 (271)
T ss_dssp             G
T ss_pred             C
Confidence            4

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.45  E-value=0.00089  Score=55.61  Aligned_cols=109  Identities=14%  Similarity=0.055  Sum_probs=72.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcC----CCceEEEecccCCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      |||.|+|+ |.+|..++..|+..+. .++.+++++..........+..    ...+.+...|  ..++.++|+||.+++.
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~--~~a~~~aD~Vii~ag~   77 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGS--YGDLEGARAVVLAAGV   77 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECC--GGGGTTEEEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECC--HHHhCCCCEEEECCCC
Confidence            78999998 9999999999988763 5899999864221111111111    1233333322  4467899999999975


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ..  ....+..+.+..|......+++.+++.+-  .++.+|
T Consensus        78 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           78 AQ--RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             CC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CC--CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            43  22334556778899999999999888753  566553

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.43  E-value=0.00032  Score=54.24  Aligned_cols=37  Identities=14%  Similarity=0.116  Sum_probs=33.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++++|+|+||+|.+|..+++.+...| .+|++++|+.
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~   73 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSD   73 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSH
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCH
Confidence            357999999999999999999999999 8999998853

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.43  E-value=0.0011  Score=55.26  Aligned_cols=111  Identities=13%  Similarity=0.124  Sum_probs=72.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhhcC--CCceEEEecccCCcccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKWIG--HPRFELIRHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~~~--~~~~~~~~~Dl~~~~~~~~d~vi~~  104 (297)
                      +.|||.|+|+ |.+|..++..|...+. .+|.+++.+......   .+.....  ...+.+.. |. ..++.++|+||.+
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~~-~~a~~~aDvVvi~   81 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-GE-YSDCHDADLVVIC   81 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-CC-GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-CC-HHHhCCCCEEEEC
Confidence            4589999998 9999999999998873 488888875321111   1111110  02333332 32 3457899999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      +|...  ....+..+.+..|......+++.+.+..-  .++.+|
T Consensus        82 ag~~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           82 AGAAQ--KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             CCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            97643  22344556778899999999998888754  455543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.42  E-value=0.00064  Score=54.29  Aligned_cols=33  Identities=21%  Similarity=0.313  Sum_probs=28.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNY   66 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~   66 (297)
                      |||.|.|++|.+|+.+++.+.+. + +++++....
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~-~elva~~d~   34 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADD-LTLSAELDA   34 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTT-CEEEEEECT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEcc
Confidence            68999999999999999999876 6 888776653

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.40  E-value=0.00059  Score=55.66  Aligned_cols=95  Identities=15%  Similarity=0.208  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCC-CccchhhhcC--CCceEEEecccCCcccCCcCEEEEccC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTG-SKDNLRKWIG--HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      +++||.|.|++|.+|+.+++.+.+....++++. +|+... .......+..  ..++.+ ..|+. ..+.++|++|.+..
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v-~~dl~-~ll~~aDVvIDFT~   97 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRI-TDDPE-SAFSNTEGILDFSQ   97 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC-BSCHH-HHTTSCSEEEECSC
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCcee-eCCHH-HHhcCCCEEEEcCC
Confidence            457999999999999999999987754777665 443221 1111111111  112221 12332 22347899998752


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEE
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT  145 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~  145 (297)
                                        -......++.|.+.|+++|.-
T Consensus        98 ------------------p~a~~~~~~~~l~~Gv~vViG  118 (288)
T 3ijp_A           98 ------------------PQASVLYANYAAQKSLIHIIG  118 (288)
T ss_dssp             ------------------HHHHHHHHHHHHHHTCEEEEC
T ss_pred             ------------------HHHHHHHHHHHHHcCCCEEEE
Confidence                              113456667777778776643

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.38  E-value=0.0022  Score=53.67  Aligned_cols=109  Identities=13%  Similarity=0.068  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCCCCcc---chhhhc----CCCceEEEecccCCcccCCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKD---NLRKWI----GHPRFELIRHDVTEPLLIEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~---~~~~~~----~~~~~~~~~~Dl~~~~~~~~d~vi  102 (297)
                      +.|||.|+|| |.+|..++..|...| + +|++.+++......   .+....    ...++... .|+  .++.++|+||
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~~g-~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~--~al~~aD~VI   87 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQKD-LGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY--EYLQNSDVVI   87 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG--GGGTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH--HHHCCCCEEE
Confidence            3479999998 999999999999999 5 89999986532221   111111    11123321 444  4578999999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      .+++...  .......+....|......+.+.+.+..-  .++.+|
T Consensus        88 ~avg~p~--k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           88 ITAGVPR--KPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             ECCSCCC--CTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EcCCCCC--CCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9987543  11223335566777888888887776543  455443

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.37  E-value=0.0015  Score=55.36  Aligned_cols=115  Identities=17%  Similarity=0.081  Sum_probs=72.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCC----eEEEEecCCCCCccchhh---hcCC---CceEEEe-cccCCcccCCcC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKN----EVIVVDNYFTGSKDNLRK---WIGH---PRFELIR-HDVTEPLLIEVD   99 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~----~v~~~~r~~~~~~~~~~~---~~~~---~~~~~~~-~Dl~~~~~~~~d   99 (297)
                      ..+||.|+||+|.+|.+++-.|...+..    .+.+.........+.+..   .+..   +-..-+. .+-....+.++|
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daD  110 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD  110 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCC
Confidence            4589999999999999999999887632    265544332222111111   1111   1111111 111123567899


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-C--CeEEEEec
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-G--ARILLTST  147 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~--~r~v~~Ss  147 (297)
                      +||.+||..  .....+..+.++.|..-.+.+.+.+.+. +  ++++.+|-
T Consensus       111 vVVitag~p--rkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          111 WALLIGAKP--RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             EEEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEEcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            999998853  3345667888999999999999999875 3  36766664

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.31  E-value=0.0015  Score=54.49  Aligned_cols=110  Identities=15%  Similarity=0.173  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccc---hhhhcC--CCceEEEecccCCcccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKWIG--HPRFELIRHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~---~~~~~~--~~~~~~~~~Dl~~~~~~~~d~vi~~  104 (297)
                      +.+||.|+|+ |.+|..++..|...+. .+|++++++.......   +.....  ...+.+.. |. ..++.++|+||.+
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~-~~al~~aDvViia   81 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-GD-YDDCRDADLVVIC   81 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-CC-GGGTTTCSEEEEC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-Cc-HHHhCCCCEEEEc
Confidence            3589999998 9999999999988772 4899999864311111   111111  11333332 21 2457799999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEE
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLT  145 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~  145 (297)
                      ++.....  ..+..+.+..|......+++.+.+..-  .++.+
T Consensus        82 ~~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~  122 (316)
T 1ldn_A           82 AGANQKP--GETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (316)
T ss_dssp             CSCCCCT--TTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             CCCCCCC--CCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence            9865432  223456677888888888888887653  44444

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.29  E-value=0.0033  Score=52.40  Aligned_cols=109  Identities=14%  Similarity=0.081  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCCCCccc---hhhh---cC-CCceEEEecccCCcccCCcCEEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDN---LRKW---IG-HPRFELIRHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~---~~~~---~~-~~~~~~~~~Dl~~~~~~~~d~vi~  103 (297)
                      .|||.|+|+ |.+|..++..|...| + +|++.+++.......   +...   .. ...+.. ..|+  ..+.++|+||.
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g-~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~--~a~~~aDiVi~   78 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDN-LADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TDDY--ADISGSDVVII   78 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHT-CCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESCG--GGGTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CCCH--HHhCCCCEEEE
Confidence            589999997 999999999999999 6 899999865322211   0000   00 112222 1343  35678999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      +++....  ......+.+..|....+.+++.+.+..-  .++.+|-
T Consensus        79 avg~p~~--~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           79 TASIPGR--PKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             CCCCSSC--CSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             eCCCCCC--CCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            9875432  2233445556677777777777766532  4555543

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.26  E-value=0.0004  Score=59.01  Aligned_cols=92  Identities=15%  Similarity=0.065  Sum_probs=52.8

Q ss_pred             CCEEEEEcCCchhHHHHHH-HHHhcCC--CeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-ccCCcCEEEEccCC
Q 022414           32 NMRILVTGGAGFIGSHLVD-KLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLACP  107 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~-~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~d~vi~~a~~  107 (297)
                      |+||.|.||+|++|+.+++ .|.+++.  .+++++.......  .... +....+.+..  ..+. ...++|+||.|.+.
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~--~v~~-~~g~~i~~~~--~~~~~~~~~~DvVf~a~g~   75 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--AAPS-FGGTTGTLQD--AFDLEALKALDIIVTCQGG   75 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCCG-GGTCCCBCEE--TTCHHHHHTCSEEEECSCH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC--Cccc-cCCCceEEEe--cCChHHhcCCCEEEECCCc
Confidence            4799999999999999999 4554441  2455555432211  1111 1111222222  2221 13589999998752


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEe
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS  146 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~S  146 (297)
                                        ......+..+.+.|++.+.++
T Consensus        76 ------------------~~s~~~a~~~~~~G~k~vVID   96 (367)
T 1t4b_A           76 ------------------DYTNEIYPKLRESGWQGYWID   96 (367)
T ss_dssp             ------------------HHHHHHHHHHHHTTCCCEEEE
T ss_pred             ------------------hhHHHHHHHHHHCCCCEEEEc
Confidence                              235566777778898534444

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.25  E-value=0.005  Score=50.84  Aligned_cols=105  Identities=15%  Similarity=0.167  Sum_probs=70.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCC--eEEEEecCCCCCcc---chhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKD---NLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ++||.|+|| |.+|..++..|+..| .  +|.+++.+.. ...   .+.. ...+++... .|+  .++.++|+||.++|
T Consensus        14 ~~kV~ViGa-G~vG~~~a~~l~~~g-~~~ev~L~Di~~~-~~g~a~dl~~-~~~~~i~~t-~d~--~~l~~aD~Vi~aag   86 (303)
T 2i6t_A           14 VNKITVVGG-GELGIACTLAISAKG-IADRLVLLDLSEG-TKGATMDLEI-FNLPNVEIS-KDL--SASAHSKVVIFTVN   86 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECCC------CHHHHHH-HTCTTEEEE-SCG--GGGTTCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEcCCcc-hHHHHHHHhh-hcCCCeEEe-CCH--HHHCCCCEEEEcCC
Confidence            589999996 999999999999998 6  8999998753 221   1221 222345442 454  45789999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ...   ...+..+.+..|....+.+++.+.+..-  .++.+|
T Consensus        87 ~~~---pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           87 SLG---SSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             C-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             CCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            742   2345566777888888888888877643  555554

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.25  E-value=0.0012  Score=52.51  Aligned_cols=66  Identities=8%  Similarity=0.027  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~  104 (297)
                      ..++|+|+|+ |.+|+.+++.|.+.| + |++++++..    ......  .++.++.+|.++..      ..++|.||.+
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~g-~-v~vid~~~~----~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGSE-V-FVLAEDENV----RKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTSE-E-EEEESCGGG----HHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCC-e-EEEEECCHH----HHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence            3578999997 999999999999999 8 999887532    222222  46888999998752      4579999976


Q ss_pred             c
Q 022414          105 A  105 (297)
Q Consensus       105 a  105 (297)
                      .
T Consensus        79 ~   79 (234)
T 2aef_A           79 L   79 (234)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.19  E-value=0.0017  Score=54.28  Aligned_cols=107  Identities=14%  Similarity=0.083  Sum_probs=67.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCC--eEEEEecCCCCCccch---hhhcC-CCceEEEecccCCcccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNL---RKWIG-HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~~~---~~~~~-~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      |||.|+|+ |.+|..++..|.+.| +  +|++++++........   ..... .........|  ...+.++|+||.+++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g-~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d--~~~~~~aDvViiav~   76 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKG-FAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD--YADLKGSDVVIVAAG   76 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC--GGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC--HHHhCCCCEEEEccC
Confidence            68999998 999999999999999 7  9999998642211111   11110 0112222223  234678999999886


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEE
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLT  145 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~  145 (297)
                      ....  ......+....|......+++.+.+..-  .++.+
T Consensus        77 ~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~  115 (319)
T 1a5z_A           77 VPQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (319)
T ss_dssp             CCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence            4331  1223445667788888888888877543  45544

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.16  E-value=0.00069  Score=55.23  Aligned_cols=75  Identities=13%  Similarity=0.264  Sum_probs=48.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ...+++++|+|+ |.+|++++..|.+.| .+|++..|+..+.. .+...+.. ..+..  .|+.+....++|+||++++.
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G-~~v~v~~R~~~~a~-~l~~~~~~~~~~~~--~~~~~~~~~~~DivIn~t~~  190 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQ-QNIVLANRTFSKTK-ELAERFQPYGNIQA--VSMDSIPLQTYDLVINATSA  190 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTT-CEEEEEESSHHHHH-HHHHHHGGGSCEEE--EEGGGCCCSCCSEEEECCCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCC-CEEEEEECCHHHHH-HHHHHccccCCeEE--eeHHHhccCCCCEEEECCCC
Confidence            345799999997 789999999999999 99999999643222 22222111 12322  23321111379999999875


Q ss_pred             C
Q 022414          108 A  108 (297)
Q Consensus       108 ~  108 (297)
                      .
T Consensus       191 ~  191 (272)
T 1p77_A          191 G  191 (272)
T ss_dssp             -
T ss_pred             C
Confidence            4

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.12  E-value=0.0013  Score=52.72  Aligned_cols=101  Identities=14%  Similarity=0.122  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC------------------Cccchhh----hcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG------------------SKDNLRK----WIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~------------------~~~~~~~----~~~~~~~~~~~~   88 (297)
                      .+++|+|.|+ |.+|+++++.|...|..+++++++..-.                  +.+.+.+    ....-.++.+..
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            4689999995 8899999999999995589999987521                  1111111    111123445444


Q ss_pred             ccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414           89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus        89 Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      ++.+.    ...++|+||.+..                 |...-..+.++|++.++.+|+.+...
T Consensus       109 ~~~~~~~~~~~~~~DvVi~~~d-----------------~~~~~~~l~~~~~~~~~p~i~~~~~g  156 (249)
T 1jw9_B          109 LLDDAELAALIAEHDLVLDCTD-----------------NVAVRNQLNAGCFAAKVPLVSGAAIR  156 (249)
T ss_dssp             CCCHHHHHHHHHTSSEEEECCS-----------------SHHHHHHHHHHHHHHTCCEEEEEEEB
T ss_pred             cCCHhHHHHHHhCCCEEEEeCC-----------------CHHHHHHHHHHHHHcCCCEEEeeecc
Confidence            44422    2347999998762                 12233566788888888888765543

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.10  E-value=0.0035  Score=52.21  Aligned_cols=102  Identities=15%  Similarity=0.129  Sum_probs=65.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCC--eEEEEecCCCCCcc-c--hhhhcC-CCceEEEec-ccCCcccCCcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKD-N--LRKWIG-HPRFELIRH-DVTEPLLIEVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~-~--~~~~~~-~~~~~~~~~-Dl~~~~~~~~d~vi~~  104 (297)
                      .|||.|+|+ |.+|..++..|...| +  +|++++|+...... .  +..... ......... |.  ....++|+||.+
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g-~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~aD~Vii~   82 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRG-IAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP--EICRDADMVVIT   82 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG--GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH--HHhCCCCEEEEC
Confidence            489999997 999999999999999 7  99999986422110 1  111110 012222222 22  345689999998


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG  139 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  139 (297)
                      ++....  ...+..+.+..|......+++.+++.+
T Consensus        83 v~~~~~--~g~~r~~~~~~n~~~~~~~~~~i~~~~  115 (319)
T 1lld_A           83 AGPRQK--PGQSRLELVGATVNILKAIMPNLVKVA  115 (319)
T ss_dssp             CCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            864321  223455667778888888888877654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.07  E-value=0.00017  Score=52.74  Aligned_cols=71  Identities=15%  Similarity=0.254  Sum_probs=47.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      +++|+|+|+ |.+|+.+++.|.+.| .+|++.+|+..... .+...+   +......+-......++|+||.+.+..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g-~~v~v~~r~~~~~~-~~a~~~---~~~~~~~~~~~~~~~~~Divi~at~~~   91 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQ-YKVTVAGRNIDHVR-AFAEKY---EYEYVLINDIDSLIKNNDVIITATSSK   91 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTT-CEEEEEESCHHHHH-HHHHHH---TCEEEECSCHHHHHHTCSEEEECSCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEcCCHHHHH-HHHHHh---CCceEeecCHHHHhcCCCEEEEeCCCC
Confidence            799999995 999999999999999 77988888643221 222222   223222221122345799999987643

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=97.07  E-value=0.00057  Score=57.44  Aligned_cols=95  Identities=14%  Similarity=0.178  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh---cCCCceEEEecccCCccc-CCcCEEEEccC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL-IEVDQIYHLAC  106 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~-~~~d~vi~~a~  106 (297)
                      .+-||.|.||||++|+++++.|.++...++..+..... ....+...   +. ..+.+...|.  ... .++|++|.|++
T Consensus        12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~-aG~~~~~~~p~~~-~~l~~~~~~~--~~~~~~~Dvvf~alp   87 (351)
T 1vkn_A           12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTY-AGKKLEEIFPSTL-ENSILSEFDP--EKVSKNCDVLFTALP   87 (351)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTT-TTSBHHHHCGGGC-CCCBCBCCCH--HHHHHHCSEEEECCS
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCccc-ccCChHHhChhhc-cCceEEeCCH--HHhhcCCCEEEECCC
Confidence            46789999999999999999999987567777664221 11222211   11 1122222121  112 46899998875


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      ..                  ....++..+  .|+++|=.|+.+
T Consensus        88 ~~------------------~s~~~~~~~--~g~~VIDlSsdf  110 (351)
T 1vkn_A           88 AG------------------ASYDLVREL--KGVKIIDLGADF  110 (351)
T ss_dssp             TT------------------HHHHHHTTC--CSCEEEESSSTT
T ss_pred             cH------------------HHHHHHHHh--CCCEEEECChhh
Confidence            32                  233444444  678888888764

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.04  E-value=0.0046  Score=51.30  Aligned_cols=104  Identities=13%  Similarity=0.062  Sum_probs=64.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhc------CCCceEEEecccCCcccCCcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI------GHPRFELIRHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~d~vi~~  104 (297)
                      +|||.|+| .|.+|..++..|.+.|. ++|++++|+...... +...+      ....+.....|.  ..+.++|+||.+
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~d~--~~~~~aDvViia   76 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKA-DQIDFQDAMANLEAHGNIVINDW--AALADADVVIST   76 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHH-HHHHHHHHGGGSSSCCEEEESCG--GGGTTCSEEEEC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHH-HHHHHHhhhhhcCCCeEEEeCCH--HHhCCCCEEEEe
Confidence            37999999 79999999999999884 689999986422211 11100      011233323454  456789999998


Q ss_pred             cCCCCCcc--cccChhhhHHHhHHHHHHHHHHHHHcC
Q 022414          105 ACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVG  139 (297)
Q Consensus       105 a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~  139 (297)
                      ++......  ......+....|......+++.+.+..
T Consensus        77 v~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~  113 (309)
T 1hyh_A           77 LGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG  113 (309)
T ss_dssp             CSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            86432100  112233456677877888888887754

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.03  E-value=0.0013  Score=53.97  Aligned_cols=65  Identities=15%  Similarity=0.264  Sum_probs=45.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      +|+|.|+|+||.+|+.+++.|.+.| ++|++.+|+..... .+..    .++..  .|. .....++|+||.+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g-~~V~~~~r~~~~~~-~~~~----~g~~~--~~~-~~~~~~aDvVi~av   75 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSA-HHLAAIEIAPEGRD-RLQG----MGIPL--TDG-DGWIDEADVVVLAL   75 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSS-SEEEEECCSHHHHH-HHHH----TTCCC--CCS-SGGGGTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCHHHHH-HHHh----cCCCc--CCH-HHHhcCCCEEEEcC
Confidence            4799999999999999999999999 89999888532211 1211    12211  122 22345799999876

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.03  E-value=0.0084  Score=50.66  Aligned_cols=100  Identities=18%  Similarity=0.128  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~   88 (297)
                      ...+|+|.|+ |.+|+++++.|...|--+++++++..-.....                      +......-.++.+..
T Consensus       117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  195 (353)
T 3h5n_A          117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL  195 (353)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence            4789999996 78999999999999977899998864221111                      111112224555555


Q ss_pred             ccCCcc----cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414           89 DVTEPL----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus        89 Dl~~~~----~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                      ++....    ..++|+||.+.-..         ..       .-..+-++|.+.++++|+.+.
T Consensus       196 ~i~~~~~~~~~~~~DlVvd~~Dn~---------~~-------~r~~ln~~c~~~~~p~i~~~~  242 (353)
T 3h5n_A          196 NINDYTDLHKVPEADIWVVSADHP---------FN-------LINWVNKYCVRANQPYINAGY  242 (353)
T ss_dssp             CCCSGGGGGGSCCCSEEEECCCCS---------TT-------HHHHHHHHHHHTTCCEEEEEE
T ss_pred             ccCchhhhhHhccCCEEEEecCCh---------HH-------HHHHHHHHHHHhCCCEEEEEE
Confidence            554332    56899999875211         10       233556788999998887654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.02  E-value=0.00018  Score=60.56  Aligned_cols=37  Identities=19%  Similarity=0.164  Sum_probs=33.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++++|+|+||+|.+|..+++.+...| .+|++++++.
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~  180 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSD  180 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            357999999999999999999999999 8999998854

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.01  E-value=0.0015  Score=53.06  Aligned_cols=73  Identities=16%  Similarity=0.224  Sum_probs=48.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ..+++++|+|+ |.+|++++..|.+.|..+|++..|+..+. +.+.+.+....+.....+  +....++|+|||+..
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a-~~la~~~~~~~~~~~~~~--~l~~~~~DivInaTp  190 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKA-LALRNELDHSRLRISRYE--ALEGQSFDIVVNATS  190 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHH-HHHHHHHCCTTEEEECSG--GGTTCCCSEEEECSS
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHhccCCeeEeeHH--HhcccCCCEEEECCC
Confidence            46799999997 78999999999999944899999864322 222222221224443322  211267999999864

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.00  E-value=0.0015  Score=53.32  Aligned_cols=74  Identities=14%  Similarity=0.229  Sum_probs=48.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC-CceEEEecccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ...+++++|+|+ |.+|++++..|.+.|..+|++..|+..+.. .+...+.. ..+.....  .+.. .++|+|||+...
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~-~la~~~~~~~~~~~~~~--~~l~-~~aDiIInaTp~  197 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAE-QLAELVAAYGEVKAQAF--EQLK-QSYDVIINSTSA  197 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHH-HHHHHHGGGSCEEEEEG--GGCC-SCEEEEEECSCC
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHH-HHHHHhhccCCeeEeeH--HHhc-CCCCEEEEcCcC
Confidence            346899999997 789999999999999449999999643322 22222211 12343332  2222 679999998643

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.98  E-value=0.00088  Score=52.29  Aligned_cols=34  Identities=29%  Similarity=0.444  Sum_probs=31.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |+|+|+||+|.+|+.+++.|.+.| ++|++++|+.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~r~~   34 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESSH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            689999999999999999999999 8999999864

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=96.97  E-value=0.0036  Score=53.03  Aligned_cols=93  Identities=18%  Similarity=0.205  Sum_probs=53.4

Q ss_pred             CEEEEEcCCchhHHHHHH-HHHhcC--CCeEEEEecCCCCCccchhhhcCCCceEEEecccCC-cccCCcCEEEEccCCC
Q 022414           33 MRILVTGGAGFIGSHLVD-KLMENE--KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLACPA  108 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~-~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~d~vi~~a~~~  108 (297)
                      |+|.|.||||++|+++++ .|.++.  ..++..++.+.....  +..+ ......+.  +..+ ..+.++|+||.|.+..
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~--~~~~-~~~~~~~~--~~~~~~~~~~~Dvvf~a~~~~   75 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP--APNF-GKDAGMLH--DAFDIESLKQLDAVITCQGGS   75 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSB--CCCS-SSCCCBCE--ETTCHHHHTTCSEEEECSCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcC--HHHh-CCCceEEE--ecCChhHhccCCEEEECCChH
Confidence            689999999999999999 666665  136555543222211  1111 11112222  2322 2346899999987521


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecc
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~  148 (297)
                                        .....+..+.+.|+  ++|=.|+.
T Consensus        76 ------------------~s~~~~~~~~~~G~k~~VID~ss~   99 (370)
T 3pzr_A           76 ------------------YTEKVYPALRQAGWKGYWIDAAST   99 (370)
T ss_dssp             ------------------HHHHHHHHHHHTTCCCEEEECSST
T ss_pred             ------------------HHHHHHHHHHHCCCCEEEEeCCch
Confidence                              24556666667887  44445543

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.97  E-value=0.00073  Score=56.08  Aligned_cols=78  Identities=8%  Similarity=0.036  Sum_probs=48.8

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC--CCccchhhhcC-CCceEEEecccCC-----cccCCcCE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRKWIG-HPRFELIRHDVTE-----PLLIEVDQ  100 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~--~~~~~~~~~~~-~~~~~~~~~Dl~~-----~~~~~~d~  100 (297)
                      ...+++++|+|+ |.+|++++..|.+.|..+|++..|+..  .+.+.+...+. .........++.+     ....++|+
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence            356899999997 899999999999999448999999731  11122222111 1122222233332     12347999


Q ss_pred             EEEccCC
Q 022414          101 IYHLACP  107 (297)
Q Consensus       101 vi~~a~~  107 (297)
                      |||+...
T Consensus       230 IINaTp~  236 (315)
T 3tnl_A          230 FTNATGV  236 (315)
T ss_dssp             EEECSST
T ss_pred             EEECccC
Confidence            9998753

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.97  E-value=0.0055  Score=50.78  Aligned_cols=108  Identities=10%  Similarity=0.054  Sum_probs=71.5

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-----CCCceEEEe-cccCCcccCCcCEEEEccCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-----GHPRFELIR-HDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~-~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ||.|+|| |.+|..++..|+..+..+|.+++++..........+.     ......+.. .|.  .++.++|+||.+++.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--~a~~~aD~Vi~~ag~   77 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY--EDMRGSDIVLVTAGI   77 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG--GGGTTCSEEEECCSC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH--HHhCCCCEEEEeCCC
Confidence            6899998 9999999999988883269999986432211111110     011222332 453  467899999999876


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ..  ....+..+....|......+++.+.+..-  .++.+|
T Consensus        78 ~~--k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           78 GR--KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             CC--CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CC--CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            43  22344556778899999999998887643  566654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.94  E-value=0.00028  Score=59.41  Aligned_cols=37  Identities=16%  Similarity=0.192  Sum_probs=33.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++++|+|+|++|.+|..+++.+...| .+|++++++.
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~  184 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGA  184 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            357999999999999999999999999 7999999854

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.92  E-value=0.0023  Score=50.21  Aligned_cols=72  Identities=21%  Similarity=0.326  Sum_probs=56.4

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ...+++|+|.|| |-+|..-++.|++.| ..|++++..   ..+.+..+.....+.++..++....+.++|.||-+.
T Consensus        28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~G-A~VtVvap~---~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT   99 (223)
T 3dfz_A           28 DLKGRSVLVVGG-GTIATRRIKGFLQEG-AAITVVAPT---VSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVAT   99 (223)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHGGGC-CCEEEECSS---CCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECC
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEECCC---CCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECC
Confidence            456899999995 899999999999999 999998864   233344444455788888888777778899998543

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=96.87  E-value=0.0006  Score=61.00  Aligned_cols=74  Identities=15%  Similarity=0.156  Sum_probs=43.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+++++|+|| |.+|++++..|.+.| .+|++..|+.... +.+...+.. .+..+ .|+.+.....+|++||++|..
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G-~~V~i~~R~~~~a-~~la~~~~~-~~~~~-~dl~~~~~~~~DilVN~agvg  435 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKG-AKVVIANRTYERA-LELAEAIGG-KALSL-TDLDNYHPEDGMVLANTTSMG  435 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHC-C-CEEEESSHHHH-HHHHHHTTC--CEET-TTTTTC--CCSEEEEECSSTT
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCC-CEEEEEECCHHHH-HHHHHHcCC-ceeeH-HHhhhccccCceEEEECCCCC
Confidence            34689999999 799999999999999 7999999864322 222222211 11111 133221223489999999864

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.85  E-value=0.00083  Score=55.48  Aligned_cols=78  Identities=18%  Similarity=0.138  Sum_probs=49.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ...+++++|+|+ |.+|+.++..|.+.|..+|++..|+..+. +.+.+.+....-.....+-......++|+||++.+..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka-~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKA-ERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHH-HHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCC
Confidence            346799999997 78999999999999933999999864222 2222222110002221111122345799999998754

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.84  E-value=0.0028  Score=53.80  Aligned_cols=94  Identities=20%  Similarity=0.186  Sum_probs=54.2

Q ss_pred             CCEEEEEcCCchhHHHHHH-HHHhcC--CCeEEEEecCCCCCccchhhhcCCCceEEEecccCC-cccCCcCEEEEccCC
Q 022414           32 NMRILVTGGAGFIGSHLVD-KLMENE--KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLACP  107 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~-~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~d~vi~~a~~  107 (297)
                      .++|.|.||||++|+.+++ .|.++.  ..++..++.+.....  +..+ ......+.  ++.+ ..+.++|+||.|.+.
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~--~~~~-~~~~~~v~--~~~~~~~~~~vDvvf~a~~~   78 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGK--APSF-AKNETTLK--DATSIDDLKKCDVIITCQGG   78 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSB--CCTT-CCSCCBCE--ETTCHHHHHTCSEEEECSCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCC--HHHc-CCCceEEE--eCCChhHhcCCCEEEECCCh
Confidence            5899999999999999999 666665  135555543221111  1111 11112222  3322 124589999998752


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecc
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~  148 (297)
                      .                  .....+..+.+.|+  ++|=.|+.
T Consensus        79 ~------------------~s~~~~~~~~~~G~k~~VID~ss~  103 (377)
T 3uw3_A           79 D------------------YTNDVFPKLRAAGWNGYWIDAASS  103 (377)
T ss_dssp             H------------------HHHHHHHHHHHTTCCSEEEECSST
T ss_pred             H------------------HHHHHHHHHHHCCCCEEEEeCCcc
Confidence            1                  34556666677887  45545553

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.83  E-value=0.0016  Score=51.04  Aligned_cols=66  Identities=11%  Similarity=0.104  Sum_probs=44.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      .+|+|.|+| +|.+|+.+++.|.+.| ++|++.+|+...    ..... ..++...  |+. ....++|+||.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g-~~V~~~~r~~~~----~~~~~-~~g~~~~--~~~-~~~~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSG-FKVVVGSRNPKR----TARLF-PSAAQVT--FQE-EAVSSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTT-CCEEEEESSHHH----HHHHS-BTTSEEE--EHH-HHTTSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCC-CEEEEEeCCHHH----HHHHH-HcCCcee--cHH-HHHhCCCEEEECCC
Confidence            458999999 8999999999999999 899999885322    22221 1234432  322 23457999998763

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.83  E-value=0.00051  Score=58.12  Aligned_cols=37  Identities=22%  Similarity=0.203  Sum_probs=33.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++++|+|+|++|.+|..+++.+...| .+|++++|+.
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~  204 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGE  204 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECST
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCH
Confidence            357899999999999999999999999 8999999864

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.81  E-value=0.0075  Score=48.38  Aligned_cols=103  Identities=10%  Similarity=0.093  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc------------------cchh----hhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK------------------DNLR----KWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~------------------~~~~----~~~~~~~~~~~~~   88 (297)
                      .+++|+|.|+ |.+|+++++.|...|..+++++++..-...                  +.+.    .....-.++.+..
T Consensus        27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  105 (251)
T 1zud_1           27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ  105 (251)
T ss_dssp             HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence            4689999996 669999999999999668888876532111                  0111    1111123444443


Q ss_pred             ccCCc----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceee
Q 022414           89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (297)
Q Consensus        89 Dl~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~  151 (297)
                      ++...    ...++|+||++..                 |...-..+.++|.+.++.+|+.+....+
T Consensus       106 ~~~~~~~~~~~~~~DvVi~~~d-----------------~~~~r~~l~~~~~~~~~p~i~~~~~g~~  155 (251)
T 1zud_1          106 RLTGEALKDAVARADVVLDCTD-----------------NMATRQEINAACVALNTPLITASAVGFG  155 (251)
T ss_dssp             CCCHHHHHHHHHHCSEEEECCS-----------------SHHHHHHHHHHHHHTTCCEEEEEEEBTE
T ss_pred             cCCHHHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHhCCCEEEEeccccc
Confidence            33321    2336899998752                 1223446677888888888887655433

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.81  E-value=0.0017  Score=54.29  Aligned_cols=36  Identities=14%  Similarity=0.036  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++++|+|+||+|.+|..+++.+...| .+|++++++.
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~  175 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTA  175 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCH
Confidence            57999999999999999999999999 8999998853

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=96.78  E-value=0.0019  Score=54.28  Aligned_cols=36  Identities=19%  Similarity=0.086  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++++|+|+||+|.+|..+++.+...| .+|++++|+.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~  180 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTE  180 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            57899999999999999999999999 8999999864

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.77  E-value=0.0043  Score=53.62  Aligned_cols=67  Identities=15%  Similarity=0.210  Sum_probs=51.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~a  105 (297)
                      .++|+|+|. |.+|+.+++.|.+.| +.|++++++..    ..... ...++.++.+|.++..      ..++|+||.+.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g-~~vvvId~d~~----~v~~~-~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSG-VKMVVLDHDPD----HIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTT-CCEEEEECCHH----HHHHH-HHTTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCC-CCEEEEECCHH----HHHHH-HhCCCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence            578999995 999999999999999 99999998542    22222 1246778899998762      34689998766

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.76  E-value=0.0025  Score=53.75  Aligned_cols=36  Identities=11%  Similarity=0.031  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++++|+|+||+|.+|..+++.+...| .+|++++++.
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~  190 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSK  190 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            57999999999999999999999999 7999998853

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.76  E-value=0.0018  Score=56.90  Aligned_cols=69  Identities=22%  Similarity=0.449  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~  104 (297)
                      +.|||+|.|+ |.+|+++++.|.+.| ++|++++++.    +.+..+.....+..+.+|-++..      ..++|.++-+
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~-~~v~vId~d~----~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGEN-NDITIVDKDG----DRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTT-EEEEEEESCH----HHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCC-CCEEEEECCH----HHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            3699999995 999999999999999 9999999843    33333322336788999998863      3468988854


Q ss_pred             c
Q 022414          105 A  105 (297)
Q Consensus       105 a  105 (297)
                      .
T Consensus        76 t   76 (461)
T 4g65_A           76 T   76 (461)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.75  E-value=0.0009  Score=55.01  Aligned_cols=76  Identities=16%  Similarity=0.147  Sum_probs=48.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCC---ceEEEecccC--CcccCCcCEEEE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP---RFELIRHDVT--EPLLIEVDQIYH  103 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dl~--~~~~~~~d~vi~  103 (297)
                      ...+++++|+|++ .+|+++++.|.+.|  +|++.+|+..... .+...+...   .. .+.+|+.  .....++|++||
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G--~V~v~~r~~~~~~-~l~~~~~~~~~~~~-~~~~d~~~~~~~~~~~DilVn  199 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN--NIIIANRTVEKAE-ALAKEIAEKLNKKF-GEEVKFSGLDVDLDGVDIIIN  199 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS--EEEEECSSHHHHH-HHHHHHHHHHTCCH-HHHEEEECTTCCCTTCCEEEE
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC--CEEEEECCHHHHH-HHHHHHhhhccccc-ceeEEEeeHHHhhCCCCEEEE
Confidence            3467999999985 99999999999998  8988888543211 222111100   00 0112222  234467999999


Q ss_pred             ccCCCC
Q 022414          104 LACPAS  109 (297)
Q Consensus       104 ~a~~~~  109 (297)
                      +++...
T Consensus       200 ~ag~~~  205 (287)
T 1nvt_A          200 ATPIGM  205 (287)
T ss_dssp             CSCTTC
T ss_pred             CCCCCC
Confidence            998653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=96.75  E-value=0.00052  Score=58.57  Aligned_cols=72  Identities=14%  Similarity=0.204  Sum_probs=47.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCC-----cccCCcCEEEEc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-----PLLIEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~d~vi~~  104 (297)
                      ..+++|+|+|+ |.+|+.+++.|...| .+|++++|+..... ...+.... .   +.+|..+     ....++|+||++
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~G-a~V~~~d~~~~~~~-~~~~~~g~-~---~~~~~~~~~~l~~~~~~~DvVi~~  236 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMG-AQVTILDVNHKRLQ-YLDDVFGG-R---VITLTATEANIKKSVQHADLLIGA  236 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHHTTT-S---EEEEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEECCHHHHH-HHHHhcCc-e---EEEecCCHHHHHHHHhCCCEEEEC
Confidence            34699999999 999999999999999 89999998643211 11121211 1   2223222     123479999999


Q ss_pred             cCCC
Q 022414          105 ACPA  108 (297)
Q Consensus       105 a~~~  108 (297)
                      ++..
T Consensus       237 ~g~~  240 (369)
T 2eez_A          237 VLVP  240 (369)
T ss_dssp             CC--
T ss_pred             CCCC
Confidence            8753

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.74  E-value=0.00031  Score=59.68  Aligned_cols=36  Identities=19%  Similarity=0.091  Sum_probs=32.7

Q ss_pred             CC--CEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCC
Q 022414           31 SN--MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYF   67 (297)
Q Consensus        31 ~~--~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~   67 (297)
                      .+  ++|+|+||+|.+|..+++.+...| . +|++++++.
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~G-a~~Vi~~~~~~  196 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLG-CSRVVGICGTH  196 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTT-CSEEEEEESCH
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCC-CCeEEEEeCCH
Confidence            46  899999999999999999999999 7 999998853

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.73  E-value=0.0032  Score=53.32  Aligned_cols=36  Identities=14%  Similarity=0.127  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++++|+|+||+|.+|..+++.+...| .+|++++++.
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~  205 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTE  205 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCh
Confidence            57899999999999999999999999 8999999854

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=96.71  E-value=0.00052  Score=58.26  Aligned_cols=36  Identities=11%  Similarity=0.092  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++++|+|+||+|.+|..+++.+...| .+|++++++.
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~  197 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQ  197 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCH
Confidence            57899999999999999999999999 8999999854

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=96.66  E-value=0.011  Score=47.76  Aligned_cols=75  Identities=25%  Similarity=0.285  Sum_probs=51.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc-cchhhhc----------------------CCCce-E
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWI----------------------GHPRF-E   84 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~----------------------~~~~~-~   84 (297)
                      ...+|+|+|.| .|-+|...++.|++.| .+|++++....... +.+..+.                      ...++ .
T Consensus        10 ~l~~k~VLVVG-gG~va~rka~~Ll~~G-a~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~   87 (274)
T 1kyq_A           10 QLKDKRILLIG-GGEVGLTRLYKLMPTG-CKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYE   87 (274)
T ss_dssp             CCTTCEEEEEE-ESHHHHHHHHHHGGGT-CEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSE
T ss_pred             EcCCCEEEEEC-CcHHHHHHHHHHHhCC-CEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeE
Confidence            45689999999 5899999999999999 99999886532111 1222221                      22355 7


Q ss_pred             EEecccCCcccC------CcCEEEEcc
Q 022414           85 LIRHDVTEPLLI------EVDQIYHLA  105 (297)
Q Consensus        85 ~~~~Dl~~~~~~------~~d~vi~~a  105 (297)
                      ++..++....+.      ++|.||-+.
T Consensus        88 ~i~~~~~~~dL~~l~~~~~adlViaat  114 (274)
T 1kyq_A           88 YIRSDFKDEYLDLENENDAWYIIMTCI  114 (274)
T ss_dssp             EECSSCCGGGGCCSSTTCCEEEEEECC
T ss_pred             EEcCCCCHHHHhhcccCCCeEEEEEcC
Confidence            777766655555      778777544

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.65  E-value=0.0015  Score=54.20  Aligned_cols=78  Identities=9%  Similarity=0.033  Sum_probs=48.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC--CccchhhhcC-CCceEEEecccCC-----cccCCcCE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--SKDNLRKWIG-HPRFELIRHDVTE-----PLLIEVDQ  100 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~~~-~~~~~~~~~Dl~~-----~~~~~~d~  100 (297)
                      ...+++++|+|+ |.+|++++..|.+.|..+|++..|+...  +.+.+.+.+. .........++.+     ....++|+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            346899999997 8999999999999994489999996321  1122222111 1122222223333     12346899


Q ss_pred             EEEccCC
Q 022414          101 IYHLACP  107 (297)
Q Consensus       101 vi~~a~~  107 (297)
                      |||+...
T Consensus       224 IINaTp~  230 (312)
T 3t4e_A          224 LTNGTKV  230 (312)
T ss_dssp             EEECSST
T ss_pred             EEECCcC
Confidence            9998653

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.64  E-value=0.0065  Score=48.39  Aligned_cols=33  Identities=24%  Similarity=0.429  Sum_probs=28.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEE-EecC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY   66 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~-~~r~   66 (297)
                      +|||.|+|+ |.+|+.+++.+.+.+. ++++ ++|+
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~   36 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENT   36 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSS
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecC
Confidence            689999999 9999999999999984 7766 4443

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.63  E-value=0.001  Score=54.40  Aligned_cols=75  Identities=15%  Similarity=0.185  Sum_probs=47.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCC--CceEEEecccCC--cccCCcCEEEEcc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH--PRFELIRHDVTE--PLLIEVDQIYHLA  105 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~--~~~~~~d~vi~~a  105 (297)
                      ..+++++|+|+ |.+|++++..|.+.|..+|++.+|+..+.. .+.+.+..  ..+.....++.+  ....++|+|||+.
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~-~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT  202 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQ-ALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHH-HHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHH-HHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence            46799999997 899999999999999447999998643322 22221110  112222222222  2334689999987


Q ss_pred             C
Q 022414          106 C  106 (297)
Q Consensus       106 ~  106 (297)
                      .
T Consensus       203 p  203 (283)
T 3jyo_A          203 P  203 (283)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.63  E-value=0.017  Score=50.25  Aligned_cols=88  Identities=18%  Similarity=0.254  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCC---eEEEEecCCCCCccchhhhcCCCceEEEecccCCc--------ccCCcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP--------LLIEVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--------~~~~~d~  100 (297)
                      .+||+|.| .|.||+.+++.|.++...   .|++.+......  .+.+..   ++.+...+++..        ...+.|+
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~--~~~~~~---g~~~~~~~Vdadnv~~~l~aLl~~~Dv   86 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV--DVAQQY---GVSFKLQQITPQNYLEVIGSTLEENDF   86 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC--CHHHHH---TCEEEECCCCTTTHHHHTGGGCCTTCE
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh--hHHhhc---CCceeEEeccchhHHHHHHHHhcCCCE
Confidence            58899999 899999999999997534   677777654332  222222   234444433221        2234599


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEE
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v  143 (297)
                      |+|++-+.                  ....++++|.+.|+.++
T Consensus        87 VIN~s~~~------------------~~l~Im~acleaGv~Yl  111 (480)
T 2ph5_A           87 LIDVSIGI------------------SSLALIILCNQKGALYI  111 (480)
T ss_dssp             EEECCSSS------------------CHHHHHHHHHHHTCEEE
T ss_pred             EEECCccc------------------cCHHHHHHHHHcCCCEE
Confidence            99866322                  35689999999998544

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.62  E-value=0.01  Score=52.03  Aligned_cols=76  Identities=16%  Similarity=0.011  Sum_probs=52.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCC-cCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIE-VDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~d~vi~~a~~~  108 (297)
                      ..+++|+|.|. |..|.++++.|.++| ++|.+.++....... ....+...++.+..+...+....+ +|.||...|..
T Consensus         7 ~~~k~v~viG~-G~sG~s~A~~l~~~G-~~V~~~D~~~~~~~~-~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~   83 (451)
T 3lk7_A            7 FENKKVLVLGL-ARSGEAAARLLAKLG-AIVTVNDGKPFDENP-TAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIP   83 (451)
T ss_dssp             TTTCEEEEECC-TTTHHHHHHHHHHTT-CEEEEEESSCGGGCH-HHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCC-CEEEEEeCCcccCCh-HHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCC
Confidence            45799999997 889999999999999 999999985422111 112233346776655443333345 89999876653

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=96.57  E-value=0.023  Score=49.88  Aligned_cols=91  Identities=13%  Similarity=0.060  Sum_probs=65.8

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ...+|+|+|.| .|-+|...++.|++.| .+|++++..   ..+.+..+....+++++..++....+.++|.||-+-+. 
T Consensus         9 ~l~~~~vlVvG-gG~va~~k~~~L~~~g-a~V~vi~~~---~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~-   82 (457)
T 1pjq_A            9 QLRDRDCLIVG-GGDVAERKARLLLEAG-ARLTVNALT---FIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDD-   82 (457)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHTT-BEEEEEESS---CCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSC-
T ss_pred             ECCCCEEEEEC-CCHHHHHHHHHHHhCc-CEEEEEcCC---CCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCC-
Confidence            34689999999 5889999999999999 999999864   22344444444578888888876667788988864321 


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCe
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR  141 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r  141 (297)
                              +    .    ....+.+.|++.|+.
T Consensus        83 --------~----~----~n~~i~~~a~~~~i~   99 (457)
T 1pjq_A           83 --------D----T----VNQRVSDAAESRRIF   99 (457)
T ss_dssp             --------H----H----HHHHHHHHHHHTTCE
T ss_pred             --------H----H----HHHHHHHHHHHcCCE
Confidence                    1    1    134677888887764

>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*

Probab=96.56  E-value=0.019  Score=47.97  Aligned_cols=31  Identities=19%  Similarity=0.432  Sum_probs=26.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEe
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVD   64 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~   64 (297)
                      +||.|.|+ |++|+.+++.|.++  ...+|+++.
T Consensus         2 ikVgInG~-G~IGr~llR~l~~~~~p~~eivaIn   34 (337)
T 1rm4_O            2 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVIN   34 (337)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCSSCSEEEEEEE
T ss_pred             eEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEE
Confidence            58999999 99999999999987  435777665

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.55  E-value=0.025  Score=47.57  Aligned_cols=104  Identities=11%  Similarity=0.182  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc------------------c----hhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------------------N----LRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~------------------~----~~~~~~~~~~~~~~~   88 (297)
                      ...+|+|.| .|.+|.++++.|...|-.++++++...-....                  .    +..+...-.++.+..
T Consensus        35 ~~~~VlivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~  113 (346)
T 1y8q_A           35 RASRVLLVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTE  113 (346)
T ss_dssp             HTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECS
T ss_pred             hCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEec
Confidence            478999999 47899999999999996688888654311111                  1    111111223455555


Q ss_pred             ccCCc---ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           89 DVTEP---LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        89 Dl~~~---~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      ++.+.   ...++|+||.+..                 |...-..+.++|.+.++++|..++.+.+|
T Consensus       114 ~~~~~~~~~~~~~dvVv~~~d-----------------~~~~r~~ln~~~~~~~ip~i~~~~~G~~G  163 (346)
T 1y8q_A          114 DIEKKPESFFTQFDAVCLTCC-----------------SRDVIVKVDQICHKNSIKFFTGDVFGYHG  163 (346)
T ss_dssp             CGGGCCHHHHTTCSEEEEESC-----------------CHHHHHHHHHHHHHTTCEEEEEEEEBTEE
T ss_pred             ccCcchHHHhcCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEeecccEE
Confidence            54321   2357999998641                 23344567888999999998887666544

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.54  E-value=0.006  Score=49.33  Aligned_cols=65  Identities=15%  Similarity=0.130  Sum_probs=46.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      +++++|+|+ |.+|++++..|.+.| .+|++..|+..+.. .+. .+   ++....  +.+  +.++|+|||+...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G-~~v~V~nRt~~ka~-~la-~~---~~~~~~--~~~--l~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQG-LQVSVLNRSSRGLD-FFQ-RL---GCDCFM--EPP--KSAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSCTTHH-HHH-HH---TCEEES--SCC--SSCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHH-HC---CCeEec--HHH--hccCCEEEEcccC
Confidence            789999996 999999999999999 99999999754332 222 22   133322  222  1289999998643

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.54  E-value=0.0012  Score=52.06  Aligned_cols=67  Identities=15%  Similarity=0.127  Sum_probs=43.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEE-EecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ++|+|.|+| +|.+|..+++.|.+.| ++|++ .+|+.... +.+....   ++.... +.. ....++|+||.+.
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g-~~V~~v~~r~~~~~-~~l~~~~---g~~~~~-~~~-~~~~~aDvVilav   89 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQ-IPAIIANSRGPASL-SSVTDRF---GASVKA-VEL-KDALQADVVILAV   89 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTT-CCEEEECTTCGGGG-HHHHHHH---TTTEEE-CCH-HHHTTSSEEEEES
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEEECCCHHHH-HHHHHHh---CCCccc-ChH-HHHhcCCEEEEeC
Confidence            368999999 8999999999999999 88888 67654322 2222211   111111 111 1245789999876

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.53  E-value=0.0049  Score=51.92  Aligned_cols=72  Identities=19%  Similarity=0.198  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecc--cCCc-----ccCCcCEEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD--VTEP-----LLIEVDQIYH  103 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D--l~~~-----~~~~~d~vi~  103 (297)
                      .+.+|+|+||+|.+|...++.+...| .+|++++++..+. +...+ +...  ..+..+  +.+.     ...++|++|+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~-~~~~~-~ga~--~v~~~~~~~~~~v~~~~~~~g~Dvvid  233 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAAT-EFVKS-VGAD--IVLPLEEGWAKAVREATGGAGVDMVVD  233 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGH-HHHHH-HTCS--EEEESSTTHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHH-HHHHh-cCCc--EEecCchhHHHHHHHHhCCCCceEEEE
Confidence            57999999999999999999999999 8999999864332 22222 2211  122222  1110     1236999999


Q ss_pred             ccCC
Q 022414          104 LACP  107 (297)
Q Consensus       104 ~a~~  107 (297)
                      ++|.
T Consensus       234 ~~g~  237 (342)
T 4eye_A          234 PIGG  237 (342)
T ss_dssp             SCC-
T ss_pred             CCch
Confidence            9973

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.51  E-value=0.0054  Score=51.45  Aligned_cols=37  Identities=22%  Similarity=0.156  Sum_probs=33.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++.+|+|+||+|.+|...++.+...| .+|++++++.
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~  183 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTD  183 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            357999999999999999999999999 8999999854

>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}

Probab=96.47  E-value=0.031  Score=39.24  Aligned_cols=84  Identities=12%  Similarity=0.048  Sum_probs=56.0

Q ss_pred             CCEEEEEcCC---chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .++|+|.|||   +-.|..+++.|++.| ++|+.+....    +...      +. -...++.+...  +|.++-+..  
T Consensus         4 p~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~~----~~i~------G~-~~y~sl~dlp~--vDlavi~~p--   67 (122)
T 3ff4_A            4 MKKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRKK----GEVL------GK-TIINERPVIEG--VDTVTLYIN--   67 (122)
T ss_dssp             CCCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSSC----SEET------TE-ECBCSCCCCTT--CCEEEECSC--
T ss_pred             CCEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCCC----CcCC------Ce-eccCChHHCCC--CCEEEEEeC--
Confidence            4789999998   678999999999999 8888876521    1110      11 12334444433  788776541  


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                                      -..+..+++.|.+.|+|.+++++
T Consensus        68 ----------------~~~v~~~v~e~~~~g~k~v~~~~   90 (122)
T 3ff4_A           68 ----------------PQNQLSEYNYILSLKPKRVIFNP   90 (122)
T ss_dssp             ----------------HHHHGGGHHHHHHHCCSEEEECT
T ss_pred             ----------------HHHHHHHHHHHHhcCCCEEEECC
Confidence                            22455777888888987666665

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.41  E-value=0.0023  Score=52.11  Aligned_cols=70  Identities=17%  Similarity=0.185  Sum_probs=46.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ..+++++|+|+ |.+|++++..|.+.|..+|++..|+..+..+ +.     ..+.....+-......++|+|||+..
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~-la-----~~~~~~~~~~~~~~~~~aDiVInaTp  184 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN-WS-----LNINKINLSHAESHLDEFDIIINTTP  184 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT-CC-----SCCEEECHHHHHHTGGGCSEEEECCC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HH-----HhcccccHhhHHHHhcCCCEEEECcc
Confidence            45799999996 8999999999999993389999986533221 11     12222222211223457899999864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.37  E-value=0.002  Score=53.33  Aligned_cols=71  Identities=17%  Similarity=0.141  Sum_probs=47.8

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCC-c----ccCCcCEEEE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-P----LLIEVDQIYH  103 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~----~~~~~d~vi~  103 (297)
                      ..++.+|+|+|++|.+|...++.+...| .+|++++++..+.. ...+ +...  ..+  |..+ .    ...++|++|+
T Consensus       123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~-~~~~-~ga~--~~~--~~~~~~~~~~~~~~~d~vid  195 (302)
T 1iz0_A          123 ARPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLA-LPLA-LGAE--EAA--TYAEVPERAKAWGGLDLVLE  195 (302)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSH-HHHH-TTCS--EEE--EGGGHHHHHHHTTSEEEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHh-cCCC--EEE--ECCcchhHHHHhcCceEEEE
Confidence            3467999999999999999999999999 79999998643322 2222 2111  112  2221 1    1257999999


Q ss_pred             ccCC
Q 022414          104 LACP  107 (297)
Q Consensus       104 ~a~~  107 (297)
                       +|.
T Consensus       196 -~g~  198 (302)
T 1iz0_A          196 -VRG  198 (302)
T ss_dssp             -CSC
T ss_pred             -CCH
Confidence             863

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.37  E-value=0.0049  Score=51.51  Aligned_cols=37  Identities=19%  Similarity=0.056  Sum_probs=33.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++++|+|+||+|.+|...++.+...| .+|++++++.
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~  175 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSP  175 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            357999999999999999999999999 8999999854

>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3

Probab=96.36  E-value=0.024  Score=44.15  Aligned_cols=31  Identities=19%  Similarity=0.400  Sum_probs=25.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV   63 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~   63 (297)
                      .||..|+|++|-+|+.+++...+.+ .++.+.
T Consensus        12 ~~~~~v~Ga~GrMG~~i~~~~~~~~-~elv~~   42 (228)
T 1vm6_A           12 HMKYGIVGYSGRMGQEIQKVFSEKG-HELVLK   42 (228)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred             cceeEEEEecCHHHHHHHHHHhCCC-CEEEEE
Confidence            5999999999999999988766667 666553

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.35  E-value=0.009  Score=49.64  Aligned_cols=69  Identities=14%  Similarity=0.132  Sum_probs=45.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCC--eEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      +.|+|.|.| .|.+|..+++.|.+.| +  +|++.+|+....    ........+.....|+.+....++|+||.+.
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G-~~~~V~~~dr~~~~~----~~a~~~G~~~~~~~~~~~~~~~~aDvVilav  102 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSG-FKGKIYGYDINPESI----SKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS  102 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTT-CCSEEEEECSCHHHH----HHHHHTTSCSEEESCTTGGGGGCCSEEEECS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCC-CCCEEEEEECCHHHH----HHHHHCCCcchhcCCHHHHhhccCCEEEEeC
Confidence            458999999 8999999999999999 7  999998864321    1111111111112233221456899999876

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.34  E-value=0.0024  Score=53.82  Aligned_cols=38  Identities=21%  Similarity=0.117  Sum_probs=33.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      .++.+|+|+|++|.+|...++.+...| .+|++++++..
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~  180 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNK  180 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSST
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHH
Confidence            357999999999999999999999999 89999998654

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.34  E-value=0.013  Score=47.90  Aligned_cols=99  Identities=15%  Similarity=0.161  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-----------------cc----chhhhcCCCceEEEecc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-----------------KD----NLRKWIGHPRFELIRHD   89 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-----------------~~----~~~~~~~~~~~~~~~~D   89 (297)
                      ...+|+|.| .|.+|+++++.|...|--++++++...-..                 .+    .+..+...-.++.+..+
T Consensus        35 ~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~  113 (292)
T 3h8v_A           35 RTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYN  113 (292)
T ss_dssp             GGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred             hCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEeccc
Confidence            468999999 588999999999999977888888764211                 01    11112222245555555


Q ss_pred             cCCc----c------------cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414           90 VTEP----L------------LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus        90 l~~~----~------------~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                      +++.    .            ..++|+|+++.-                 |...-..+-++|.+.++.+|+.+.
T Consensus       114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D-----------------n~~~R~~in~~c~~~~~Pli~~gv  170 (292)
T 3h8v_A          114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD-----------------NFEARMTINTACNELGQTWMESGV  170 (292)
T ss_dssp             TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS-----------------SHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             CCcHHHHHHHhhhhcccccccCCCCCEEEECCc-----------------chhhhhHHHHHHHHhCCCEEEeee
Confidence            5431    0            147899998751                 223334577888999998887654

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.30  E-value=0.011  Score=46.04  Aligned_cols=37  Identities=19%  Similarity=0.297  Sum_probs=30.1

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ....+|+|.|.| .|.+|+.++..|.+.| ++|++.+|+
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g-~~V~~~~~~   51 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAG-HEVTYYGSK   51 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECTT
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEcCC
Confidence            334579999999 7999999999999999 999998885

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.29  E-value=0.0042  Score=52.60  Aligned_cols=36  Identities=19%  Similarity=0.234  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++.+|+|+||+|.+|...++.+...| .+|++++++.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~  202 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGST  202 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCH
Confidence            57899999999999999999999999 8999999864

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=96.26  E-value=0.036  Score=40.20  Aligned_cols=85  Identities=13%  Similarity=0.102  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCC---chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           31 SNMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        31 ~~~~ilItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ..++|+|.|++   |.+|..+++.|.+.| ++|+.+...  .  +.+      .++. +..++.+.. ..+|.++-+.. 
T Consensus        21 ~p~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vnp~--~--~~i------~G~~-~y~sl~~l~-~~vDlvvi~vp-   86 (144)
T 2d59_A           21 RYKKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPK--Y--EEV------LGRK-CYPSVLDIP-DKIEVVDLFVK-   86 (144)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT--C--SEE------TTEE-CBSSGGGCS-SCCSEEEECSC-
T ss_pred             CCCEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEECCC--C--CeE------CCee-ccCCHHHcC-CCCCEEEEEeC-
Confidence            47899999999   899999999999999 786665432  1  111      1222 122333322 36898887651 


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEe
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS  146 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~S  146 (297)
                                       -.....+++.|.+.|++.+++.
T Consensus        87 -----------------~~~~~~vv~~~~~~gi~~i~~~  108 (144)
T 2d59_A           87 -----------------PKLTMEYVEQAIKKGAKVVWFQ  108 (144)
T ss_dssp             -----------------HHHHHHHHHHHHHHTCSEEEEC
T ss_pred             -----------------HHHHHHHHHHHHHcCCCEEEEC
Confidence                             1345677788888898654444

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.25  E-value=0.0085  Score=50.89  Aligned_cols=37  Identities=22%  Similarity=0.162  Sum_probs=33.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++.+|+|+||+|.+|..+++.+...| .+|++++++.
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~  198 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSSD  198 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEECCH
Confidence            357899999999999999999999999 7999998853

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.19  E-value=0.015  Score=46.90  Aligned_cols=66  Identities=15%  Similarity=0.138  Sum_probs=43.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCe-EEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      +|+|.|.|+ |.+|+.+++.|.+.| ++ |.+.+|+..... .+...   .++.. ..|+. ....++|+||.+.
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g-~~~v~~~~~~~~~~~-~~~~~---~g~~~-~~~~~-~~~~~~Dvvi~av   76 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKG-FRIVQVYSRTEESAR-ELAQK---VEAEY-TTDLA-EVNPYAKLYIVSL   76 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHT-CCEEEEECSSHHHHH-HHHHH---TTCEE-ESCGG-GSCSCCSEEEECC
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCC-CeEEEEEeCCHHHHH-HHHHH---cCCce-eCCHH-HHhcCCCEEEEec
Confidence            589999995 999999999999999 77 788887532211 11111   12322 12322 2345799999876

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.19  E-value=0.0077  Score=50.73  Aligned_cols=36  Identities=11%  Similarity=-0.006  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++++|+|+|++|.+|..+++.+...| .+|++++++.
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~  201 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSE  201 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            57899999999999999999999999 8999998854

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.19  E-value=0.018  Score=50.26  Aligned_cols=33  Identities=36%  Similarity=0.464  Sum_probs=30.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |+|.|.| +|++|..++..|.+.| ++|++++|+.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G-~~V~~~d~~~   33 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARG-HEVIGVDVSS   33 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEECCH
Confidence            6899998 7999999999999999 9999999864

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.19  E-value=0.064  Score=38.56  Aligned_cols=85  Identities=20%  Similarity=0.235  Sum_probs=53.4

Q ss_pred             cCCCEEEEEcCC---chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           30 QSNMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        30 ~~~~~ilItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ...++|.|.|+|   |.+|..+++.|++.| ++|+.+.++.    +..      .++. ...++.+. ...+|+++-+..
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vnp~~----~~i------~G~~-~~~s~~el-~~~vDlvii~vp   78 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVNPNY----DEI------EGLK-CYRSVREL-PKDVDVIVFVVP   78 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTTC----SEE------TTEE-CBSSGGGS-CTTCCEEEECSC
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeCCCC----CeE------CCee-ecCCHHHh-CCCCCEEEEEeC
Confidence            346889999997   899999999999999 8877776532    111      1222 12233322 236899887652


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEE
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT  145 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~  145 (297)
                                        -.....+++.|.+.|++.+++
T Consensus        79 ------------------~~~v~~v~~~~~~~g~~~i~~   99 (138)
T 1y81_A           79 ------------------PKVGLQVAKEAVEAGFKKLWF   99 (138)
T ss_dssp             ------------------HHHHHHHHHHHHHTTCCEEEE
T ss_pred             ------------------HHHHHHHHHHHHHcCCCEEEE
Confidence                              123455666677788854443

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.18  E-value=0.031  Score=49.10  Aligned_cols=37  Identities=16%  Similarity=0.153  Sum_probs=33.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhc-CCC-eEEEEecCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMEN-EKN-EVIVVDNYFT   68 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~-~v~~~~r~~~   68 (297)
                      .+.|||.|.| .|++|..++..|.+. | + +|++.+++..
T Consensus        16 ~~~mkIaVIG-lG~mG~~lA~~la~~~G-~~~V~~~D~~~~   54 (478)
T 3g79_A           16 GPIKKIGVLG-MGYVGIPAAVLFADAPC-FEKVLGFQRNSK   54 (478)
T ss_dssp             CSCCEEEEEC-CSTTHHHHHHHHHHSTT-CCEEEEECCCCT
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHhCC-CCeEEEEECChh
Confidence            3468999998 799999999999999 9 9 9999999765

>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}

Probab=96.17  E-value=0.038  Score=53.07  Aligned_cols=104  Identities=11%  Similarity=0.120  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc------------------chh----hhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------------------NLR----KWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~------------------~~~----~~~~~~~~~~~~~   88 (297)
                      ...+|+|.|+ |.+|.++++.|...|--++++++...-....                  ...    .+...-.++.+..
T Consensus        26 ~~s~VlIvG~-GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~a~~~~L~~lNP~v~v~~~~~  104 (1015)
T 3cmm_A           26 QTSNVLILGL-KGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAKLAELNAYVPVNVLDS  104 (1015)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHTTSCTTSCEEECCC
T ss_pred             hcCEEEEECC-ChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHHHHHHHHHHHHHCCCCeEEEecC
Confidence            4789999995 7799999999999997788888876321111                  011    1111124555555


Q ss_pred             ccCCcccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceee
Q 022414           89 DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (297)
Q Consensus        89 Dl~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~  151 (297)
                      ++......++|+||.+..                .|...-..+.++|.+.++++|+.++.+.+
T Consensus       105 ~l~~~~l~~~DvVv~~~d----------------~~~~~r~~ln~~c~~~~iplI~~~~~G~~  151 (1015)
T 3cmm_A          105 LDDVTQLSQFQVVVATDT----------------VSLEDKVKINEFCHSSGIRFISSETRGLF  151 (1015)
T ss_dssp             CCCSTTGGGCSEEEECTT----------------SCHHHHHHHHHHHHHHTCEEEEEEEETTE
T ss_pred             CCCHHHHhcCCEEEEcCC----------------CCHHHHHHHHHHHHHcCCCEEEEEecccE
Confidence            554444567999997541                02344567788899999998887765543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.15  E-value=0.0081  Score=50.67  Aligned_cols=36  Identities=25%  Similarity=0.253  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~   67 (297)
                      ++++|+|+|++|.+|..+++.+... | .+|++++++.
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~  206 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVRE  206 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCH
Confidence            5789999999999999999999999 9 8999998754

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.15  E-value=0.003  Score=53.64  Aligned_cols=74  Identities=19%  Similarity=0.300  Sum_probs=47.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccC--CcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT--EPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~d~vi~~a~~~  108 (297)
                      .+++|+|+|+ |.+|+.+++.|...| .+|++++|+..+.. .+..... ..+..+..+..  .....++|+||++++..
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~G-a~V~v~dr~~~r~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~  241 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLG-AQVQIFDINVERLS-YLETLFG-SRVELLYSNSAEIETAVAEADLLIGAVLVP  241 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHHHG-GGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEeCCHHHHH-HHHHhhC-ceeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence            3589999998 999999999999999 69999998643221 1222211 12222211111  12234799999998753

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.15  E-value=0.011  Score=48.01  Aligned_cols=71  Identities=17%  Similarity=0.175  Sum_probs=47.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+|+|+|+|+ |.+|++++..|.+.| .+|++.+|+...    ...+....++.... |+ .....++|+||++....
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g-~~V~v~~r~~~~----~~~l~~~~g~~~~~-~~-~~~~~~aDiVi~atp~~  197 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEG-AKVFLWNRTKEK----AIKLAQKFPLEVVN-SP-EEVIDKVQVIVNTTSVG  197 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHT-CEEEEECSSHHH----HHHHTTTSCEEECS-CG-GGTGGGCSEEEECSSTT
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcC-CEEEEEECCHHH----HHHHHHHcCCeeeh-hH-HhhhcCCCEEEEeCCCC
Confidence            45799999995 899999999999999 699998885322    22221112333221 22 22345799999987543

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.14  E-value=0.006  Score=50.31  Aligned_cols=36  Identities=19%  Similarity=0.320  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++++|.|+||.|.+|..++..|.+.| ++|++.+|+.
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~~~~~   55 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASG-YPISILDRED   55 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTT-CCEEEECTTC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCC-CeEEEEECCc
Confidence            45789999999999999999999999 8999998854

>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1

Probab=96.13  E-value=0.011  Score=49.63  Aligned_cols=94  Identities=10%  Similarity=0.123  Sum_probs=56.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEec-cc----C--------C--cccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH-DV----T--------E--PLLIE   97 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-Dl----~--------~--~~~~~   97 (297)
                      .||.|.|+ |.+|+.+++.|.++...+++++..........+...   .++..... |.    .        +  ....+
T Consensus         2 ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~---~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~   77 (340)
T 1b7g_O            2 VNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHR---RGIRIYVPQQSIKKFEESGIPVAGTVEDLIKT   77 (340)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHH---TTCCEECCGGGHHHHHTTTCCCCCCHHHHHHH
T ss_pred             eEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHh---cCcceecCcCHHHHhcccccccccCHhHhhcC
Confidence            58999999 999999999998876467776654321111111111   12222211 11    0        0  11136


Q ss_pred             cCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecc
Q 022414           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~  148 (297)
                      +|+|+.|.+..                  .....+..+.+.|++.|..|+.
T Consensus        78 vDvV~~aTp~~------------------~s~~~a~~~~~aG~kvV~~sa~  110 (340)
T 1b7g_O           78 SDIVVDTTPNG------------------VGAQYKPIYLQLQRNAIFQGGE  110 (340)
T ss_dssp             CSEEEECCSTT------------------HHHHHHHHHHHTTCEEEECTTS
T ss_pred             CCEEEECCCCc------------------hhHHHHHHHHHcCCeEEEeCCC
Confidence            89999987532                  2445666777889988888876

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.07  E-value=0.013  Score=49.25  Aligned_cols=65  Identities=8%  Similarity=0.041  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~a  105 (297)
                      .++++|+|. |.+|+.+++.|.+.| + |+++++++..    ..  +...++.++.+|.++..      ..++|.++-+.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g-~-v~vid~~~~~----~~--~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~  185 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSE-V-FVLAEDENVR----KK--VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDL  185 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSC-E-EEEESCGGGH----HH--HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCC-c-EEEEeCChhh----hh--HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence            468999996 999999999999999 7 9988875422    22  22257889999998762      44688888765

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.07  E-value=0.014  Score=51.07  Aligned_cols=33  Identities=24%  Similarity=0.325  Sum_probs=30.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |||.|.| .|++|..++..|.+.| ++|++++|+.
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G-~~V~~~D~~~   35 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELG-ANVRCIDTDR   35 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcC-CEEEEEECCH
Confidence            8999998 6999999999999999 9999999964

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.03  E-value=0.0058  Score=52.17  Aligned_cols=72  Identities=19%  Similarity=0.266  Sum_probs=46.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~  104 (297)
                      .++.+|+|+||+|.+|...++.+...| .+|+++++.  .+.+...+ +...  ..+..+-.+.     ...++|++|++
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~~~--~~~~~~~~-lGa~--~v~~~~~~~~~~~~~~~~g~D~vid~  255 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVCSQ--DASELVRK-LGAD--DVIDYKSGSVEEQLKSLKPFDFILDN  255 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECG--GGHHHHHH-TTCS--EEEETTSSCHHHHHHTSCCBSEEEES
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCh--HHHHHHHH-cCCC--EEEECCchHHHHHHhhcCCCCEEEEC
Confidence            457899999999999999999999999 789888742  22222222 2111  1122111110     12479999999


Q ss_pred             cCC
Q 022414          105 ACP  107 (297)
Q Consensus       105 a~~  107 (297)
                      +|.
T Consensus       256 ~g~  258 (375)
T 2vn8_A          256 VGG  258 (375)
T ss_dssp             SCT
T ss_pred             CCC
Confidence            873

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=96.00  E-value=0.051  Score=45.36  Aligned_cols=72  Identities=14%  Similarity=-0.031  Sum_probs=47.3

Q ss_pred             CCEEEEEcCCchhHH-HHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-CCcCEEEEccCCC
Q 022414           32 NMRILVTGGAGFIGS-HLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-IEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGatG~iG~-~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~d~vi~~a~~~  108 (297)
                      +|+|.+.| -|..|. .+++.|.++| ++|.+.++.....   ....+...++.+..+.-.+... .++|.||...|..
T Consensus         4 ~~~i~~iG-iGg~Gms~~A~~L~~~G-~~V~~~D~~~~~~---~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~   77 (326)
T 3eag_A            4 MKHIHIIG-IGGTFMGGLAAIAKEAG-FEVSGCDAKMYPP---MSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAK   77 (326)
T ss_dssp             CCEEEEES-CCSHHHHHHHHHHHHTT-CEEEEEESSCCTT---HHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCC
T ss_pred             CcEEEEEE-ECHHHHHHHHHHHHhCC-CEEEEEcCCCCcH---HHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcC
Confidence            58999999 467787 5999999999 9999999864321   1112222466666543222222 3689999876653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.00  E-value=0.023  Score=46.30  Aligned_cols=69  Identities=19%  Similarity=0.226  Sum_probs=46.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEe-cccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR-HDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ...+++++|+|+ |..|++++..|.+.|..+|++..|+..+. +.+..     .+.... .|+.+  . ++|+|||+...
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka-~~La~-----~~~~~~~~~l~~--l-~~DivInaTp~  188 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKT-SEIYG-----EFKVISYDELSN--L-KGDVIINCTPK  188 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHH-HHHCT-----TSEEEEHHHHTT--C-CCSEEEECSST
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHH-----hcCcccHHHHHh--c-cCCEEEECCcc
Confidence            346899999996 78999999999999944999999864321 12221     222222 23333  3 89999998743

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.98  E-value=0.084  Score=47.90  Aligned_cols=101  Identities=13%  Similarity=0.178  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc----------------------hhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~   88 (297)
                      ...+|+|.|+ |.+|.++++.|...|--++++++...-.....                      +..+...-.++.+..
T Consensus        16 ~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~   94 (640)
T 1y8q_B           16 AGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHD   94 (640)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEES
T ss_pred             hcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEec
Confidence            3589999996 88999999999999966898888764211111                      111111224555556


Q ss_pred             ccCCc-----ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414           89 DVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus        89 Dl~~~-----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                      ++...     -..++|+||.+..                 |...-..+-++|.+.++.+|+.++.+
T Consensus        95 ~i~~~~~~~~~~~~~DlVvda~D-----------------n~~aR~~ln~~c~~~~iPlI~~g~~G  143 (640)
T 1y8q_B           95 SIMNPDYNVEFFRQFILVMNALD-----------------NRAARNHVNRMCLAADVPLIESGTAG  143 (640)
T ss_dssp             CTTSTTSCHHHHTTCSEEEECCS-----------------CHHHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             ccchhhhhHhhhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEec
Confidence            66432     2357899998752                 23345567788888898888776554

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.97  E-value=0.0031  Score=52.67  Aligned_cols=71  Identities=18%  Similarity=0.267  Sum_probs=46.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCC---cccCCcCEEEEccC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE---PLLIEVDQIYHLAC  106 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~d~vi~~a~  106 (297)
                      .++.+|+|+||+|.+|...++.+...| .+|+++.+...  .+...+ +...  ..+..+-.+   ....++|++|++.|
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~~~~~--~~~~~~-lGa~--~~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKG-TTVITTASKRN--HAFLKA-LGAE--QCINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEECHHH--HHHHHH-HTCS--EEEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEeccch--HHHHHH-cCCC--EEEeCCCcchhhhhccCCCEEEECCC
Confidence            357999999999999999999999999 78988875321  222222 2211  122221111   12357999999986

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=95.95  E-value=0.013  Score=47.84  Aligned_cols=34  Identities=26%  Similarity=0.248  Sum_probs=31.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      |+|.|.|+ |.+|..++..|.+.| ++|++++|+..
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g-~~V~~~~r~~~   34 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQG-HEVQGWLRVPQ   34 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSCC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCC-CCEEEEEcCcc
Confidence            68999996 999999999999999 99999999754

>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*

Probab=95.94  E-value=0.068  Score=44.71  Aligned_cols=31  Identities=23%  Similarity=0.464  Sum_probs=26.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEe
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVD   64 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~   64 (297)
                      +||.|.|+ |.||+.+++.|.++  ...+|+++.
T Consensus         3 ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaIn   35 (339)
T 3b1j_A            3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAIN   35 (339)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred             eEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEe
Confidence            68999999 99999999999987  546777665

>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1

Probab=95.94  E-value=0.007  Score=50.77  Aligned_cols=33  Identities=21%  Similarity=0.409  Sum_probs=27.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      ++||.|.|+ |++|+.+++.|.++...+++++..
T Consensus         1 mikVgIiGa-G~iG~~l~r~L~~~~~~elvav~d   33 (337)
T 1cf2_P            1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSK   33 (337)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEeE-CHHHHHHHHHHHcCCCcEEEEEEc
Confidence            368999999 999999999998865477766654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.94  E-value=0.0043  Score=52.84  Aligned_cols=70  Identities=16%  Similarity=0.119  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a  105 (297)
                      ++.+|+|+|+ |.+|...++.+...| .+|++++++...... ..+.+...  ..+  |..+.     ...++|++|+++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~-~~~~lGa~--~v~--~~~~~~~~~~~~~~~D~vid~~  259 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFG-SKVTVISTSPSKKEE-ALKNFGAD--SFL--VSRDQEQMQAAAGTLDGIIDTV  259 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCGGGHHH-HHHTSCCS--EEE--ETTCHHHHHHTTTCEEEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHhcCCc--eEE--eccCHHHHHHhhCCCCEEEECC
Confidence            6789999996 999999999999999 799999886432221 11111111  122  22111     123799999998


Q ss_pred             CC
Q 022414          106 CP  107 (297)
Q Consensus       106 ~~  107 (297)
                      |.
T Consensus       260 g~  261 (366)
T 1yqd_A          260 SA  261 (366)
T ss_dssp             SS
T ss_pred             Cc
Confidence            74

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=95.88  E-value=0.076  Score=41.96  Aligned_cols=82  Identities=22%  Similarity=0.251  Sum_probs=50.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEE-EEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~  111 (297)
                      |||.|.|. |.+|+.+++.|.+.| +++. +.+++. . .+         .   ...|+.+....++|+|+.+....   
T Consensus         1 m~vgiIG~-G~mG~~~~~~l~~~g-~~lv~v~d~~~-~-~~---------~---~~~~~~~l~~~~~DvVv~~~~~~---   61 (236)
T 2dc1_A            1 MLVGLIGY-GAIGKFLAEWLERNG-FEIAAILDVRG-E-HE---------K---MVRGIDEFLQREMDVAVEAASQQ---   61 (236)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEEECSSC-C-CT---------T---EESSHHHHTTSCCSEEEECSCHH---
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCC-CEEEEEEecCc-c-hh---------h---hcCCHHHHhcCCCCEEEECCCHH---
Confidence            68999996 999999999999878 8874 555532 1 11         1   12222221115799999987311   


Q ss_pred             ccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecc
Q 022414          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (297)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~  148 (297)
                                     ....++..+.+.|..++-.++.
T Consensus        62 ---------------~~~~~~~~~l~~G~~vv~~~~~   83 (236)
T 2dc1_A           62 ---------------AVKDYAEKILKAGIDLIVLSTG   83 (236)
T ss_dssp             ---------------HHHHHHHHHHHTTCEEEESCGG
T ss_pred             ---------------HHHHHHHHHHHCCCcEEEECcc
Confidence                           2333344566677765555543

>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1

Probab=95.85  E-value=0.019  Score=48.02  Aligned_cols=33  Identities=18%  Similarity=0.415  Sum_probs=27.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      ++||.|.|. |++|+.+++.|.++...+|+++.-
T Consensus         3 ~ikVgI~G~-G~iGr~~~R~l~~~~~vevvaI~d   35 (335)
T 1u8f_O            3 KVKVGVNGF-GRIGRLVTRAAFNSGKVDIVAIND   35 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred             ceEEEEEcc-CHHHHHHHHHHHcCCCcEEEEecC
Confidence            469999996 999999999998875478877764

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.81  E-value=0.019  Score=46.70  Aligned_cols=64  Identities=22%  Similarity=0.278  Sum_probs=42.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceE-EEecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFE-LIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |+|.|+| .|.+|+.+++.|.+.| ++|++.+|+...... +.+    .++. ....|+.+ . .++|+||.+.
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~~~~~~~~~-~~~----~g~~~~~~~~~~~-~-~~~D~vi~av   65 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRG-HYLIGVSRQQSTCEK-AVE----RQLVDEAGQDLSL-L-QTAKIIFLCT   65 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCHHHHHH-HHH----TTSCSEEESCGGG-G-TTCSEEEECS
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCC-CEEEEEECCHHHHHH-HHh----CCCCccccCCHHH-h-CCCCEEEEEC
Confidence            6899999 7999999999999999 899999885432211 111    1111 11223322 2 6789999876

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.80  E-value=0.023  Score=46.84  Aligned_cols=68  Identities=10%  Similarity=0.040  Sum_probs=44.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      +.|+|.|+| .|.+|..+++.|.+.| ++|++.+|+....    ..... .+......|+ .....++|+||.+..
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G-~~V~~~dr~~~~~----~~~~~-~g~~~~~~~~-~e~~~~aDvvi~~vp   73 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAG-LSTWGADLNPQAC----ANLLA-EGACGAAASA-REFAGVVDALVILVV   73 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCHHHH----HHHHH-TTCSEEESSS-TTTTTTCSEEEECCS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCC-CeEEEEECCHHHH----HHHHH-cCCccccCCH-HHHHhcCCEEEEECC
Confidence            458999998 7999999999999999 9999999854322    11111 1221111222 223456888887763

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.77  E-value=0.0048  Score=52.72  Aligned_cols=73  Identities=15%  Similarity=0.093  Sum_probs=47.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEe---cccCCcccCCcCEEEEccC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR---HDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~---~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ..+++|+|+|+ |.+|+.+++.|...| .+|++.+|+..... ...+.+.. .+....   .++ +....++|+||++++
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~G-a~V~~~d~~~~~l~-~~~~~~g~-~~~~~~~~~~~l-~~~l~~aDvVi~~~~  240 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMG-ATVTVLDINIDKLR-QLDAEFCG-RIHTRYSSAYEL-EGAVKRADLVIGAVL  240 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHHTTT-SSEEEECCHHHH-HHHHHHCSEEEECCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEeCCHHHHH-HHHHhcCC-eeEeccCCHHHH-HHHHcCCCEEEECCC
Confidence            35799999998 999999999999999 79999998543211 12221211 111111   111 122347999999886


Q ss_pred             C
Q 022414          107 P  107 (297)
Q Consensus       107 ~  107 (297)
                      .
T Consensus       241 ~  241 (377)
T 2vhw_A          241 V  241 (377)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=95.76  E-value=0.0065  Score=52.44  Aligned_cols=73  Identities=19%  Similarity=0.288  Sum_probs=47.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ..+++|+|+|+ |.+|+.+++.|...|..+|++.+|+..+. +.+...+   +...+..+-......++|+||++.+.
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra-~~la~~~---g~~~~~~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERA-VELARDL---GGEAVRFDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHHHHH---TCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHc---CCceecHHhHHHHhcCCCEEEEccCC
Confidence            46899999997 99999999999999933899999854221 1222222   22222211111223579999998754

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.75  E-value=0.01  Score=49.57  Aligned_cols=33  Identities=30%  Similarity=0.313  Sum_probs=30.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +|+|+|++|.+|...++.+...| .+|++++++.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~  184 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKA  184 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCH
Confidence            79999999999999999999999 7899998864

>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*

Probab=95.74  E-value=0.044  Score=45.72  Aligned_cols=33  Identities=24%  Similarity=0.463  Sum_probs=27.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      ++||.|.|+ |++|+.+++.|.++...+|+++..
T Consensus         1 mikVgI~G~-G~iGr~l~R~l~~~~~veivain~   33 (334)
T 3cmc_O            1 AVKVGINGF-GRIGRNVFRAALKNPDIEVVAVND   33 (334)
T ss_dssp             CEEEEEESC-SHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred             CeEEEEECC-CHHHHHHHHHHhCCCCeEEEEEeC
Confidence            368999999 999999999999885467776654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=95.73  E-value=0.015  Score=49.44  Aligned_cols=69  Identities=14%  Similarity=0.110  Sum_probs=45.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC---CCCccchhhhcCCCceEEEec-ccCCc---ccCCcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF---TGSKDNLRKWIGHPRFELIRH-DVTEP---LLIEVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~-Dl~~~---~~~~~d~vi~~  104 (297)
                      +++|+|+|+ |.+|..+++.+...| .+|++++++.   .+. +...+ +   +.+.+.. |+.+.   ...++|++|++
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~-~~~~~-~---ga~~v~~~~~~~~~~~~~~~~d~vid~  253 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYG-LEVWMANRREPTEVEQ-TVIEE-T---KTNYYNSSNGYDKLKDSVGKFDVIIDA  253 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHT-CEEEEEESSCCCHHHH-HHHHH-H---TCEEEECTTCSHHHHHHHCCEEEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEeCCccchHHH-HHHHH-h---CCceechHHHHHHHHHhCCCCCEEEEC
Confidence            899999999 999999999999999 7999999864   211 11211 2   2333311 11110   01469999999


Q ss_pred             cCC
Q 022414          105 ACP  107 (297)
Q Consensus       105 a~~  107 (297)
                      +|.
T Consensus       254 ~g~  256 (366)
T 2cdc_A          254 TGA  256 (366)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            974

>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*

Probab=95.72  E-value=0.05  Score=45.55  Aligned_cols=32  Identities=28%  Similarity=0.537  Sum_probs=26.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHh---cCCCeEEEEec
Q 022414           33 MRILVTGGAGFIGSHLVDKLME---NEKNEVIVVDN   65 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~---~g~~~v~~~~r   65 (297)
                      +||.|.|+ |++|+.+++.|.+   +...+|+++..
T Consensus         3 ikVgI~G~-G~iGr~l~r~l~~~~~~~~~eivai~~   37 (339)
T 2x5j_O            3 VRVAINGF-GRIGRNVVRALYESGRRAEITVVAINE   37 (339)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTSGGGTEEEEEEEC
T ss_pred             eEEEEECc-CHHHHHHHHHHHcCCCCCCEEEEEEeC
Confidence            68999998 9999999999998   64377777654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.70  E-value=0.023  Score=46.79  Aligned_cols=72  Identities=11%  Similarity=0.037  Sum_probs=48.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ...+++|+|+|+ |.+|+.+++.|...| .+|++.+|+.... +.+..    .++..+..+-.+..+.++|+|+.+...
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G-~~V~~~d~~~~~~-~~~~~----~g~~~~~~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALG-ANVKVGARSSAHL-ARITE----MGLVPFHTDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESSHHHH-HHHHH----TTCEEEEGGGHHHHSTTCSEEEECCSS
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCC-CEEEEEECCHHHH-HHHHH----CCCeEEchhhHHHHhhCCCEEEECCCh
Confidence            346899999995 999999999999999 8999999864221 11111    133333222223345689999998753

>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1

Probab=95.66  E-value=0.022  Score=47.69  Aligned_cols=34  Identities=21%  Similarity=0.363  Sum_probs=27.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ++||.|.|+ |++|+.+++.|.+....+++++...
T Consensus         2 ~irVgIiG~-G~iG~~~~r~l~~~~~~elvav~d~   35 (334)
T 2czc_A            2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKT   35 (334)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEES
T ss_pred             CcEEEEEeE-hHHHHHHHHHHhcCCCCEEEEEEcC
Confidence            368999997 9999999999988754677776643

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.64  E-value=0.0092  Score=49.91  Aligned_cols=34  Identities=26%  Similarity=0.356  Sum_probs=30.8

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      +|+|+||+|.+|...++.+...| .+|++++++..
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~  186 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNRE  186 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence            89999999999999999999999 78999998643

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=95.63  E-value=0.0058  Score=51.52  Aligned_cols=68  Identities=18%  Similarity=0.255  Sum_probs=45.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc--------ccCCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP--------LLIEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--------~~~~~d~vi  102 (297)
                      ++.+|+|+||+|.+|...++.+...| .+|+++ ++..+ .+...+ +   +.+.+. +-.+.        ...++|++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~G-a~Vi~~-~~~~~-~~~~~~-l---Ga~~i~-~~~~~~~~~~~~~~~~g~D~vi  221 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARG-ARVFAT-ARGSD-LEYVRD-L---GATPID-ASREPEDYAAEHTAGQGFDLVY  221 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE-ECHHH-HHHHHH-H---TSEEEE-TTSCHHHHHHHHHTTSCEEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEE-eCHHH-HHHHHH-c---CCCEec-cCCCHHHHHHHHhcCCCceEEE
Confidence            57999999999999999999999999 789888 43221 222222 2   222222 11111        123799999


Q ss_pred             EccC
Q 022414          103 HLAC  106 (297)
Q Consensus       103 ~~a~  106 (297)
                      +++|
T Consensus       222 d~~g  225 (343)
T 3gaz_A          222 DTLG  225 (343)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9986

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.61  E-value=0.035  Score=44.97  Aligned_cols=38  Identities=13%  Similarity=0.208  Sum_probs=33.6

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ....+++++|+|+++.+|+.++..|++.| .+|++..+.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~g-AtVtv~h~~  193 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAG-ATVSVCHIK  193 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTT-CEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCC
Confidence            34578999999999999999999999999 889888763

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=95.61  E-value=0.028  Score=46.28  Aligned_cols=35  Identities=20%  Similarity=0.284  Sum_probs=32.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      |+||.++| .|.+|..+++.|++.| ++|++.+|++.
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G-~~v~v~dr~~~   37 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAG-YLLNVFDLVQS   37 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSSHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCC-CeEEEEcCCHH
Confidence            67999999 8999999999999999 99999999643

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=95.60  E-value=0.017  Score=48.77  Aligned_cols=36  Identities=17%  Similarity=0.104  Sum_probs=32.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      +++++|+||+|.+|...++.+...| .+|++++++..
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~~~~  200 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEG-FRPIVTVRRDE  200 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESCGG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence            4899999999999999999999999 79999998543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=95.59  E-value=0.01  Score=50.33  Aligned_cols=71  Identities=21%  Similarity=0.141  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEec----ccCCcccCCcCEEEEccC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH----DVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~----Dl~~~~~~~~d~vi~~a~  106 (297)
                      ++.+|+|+|+ |.+|...++.+...| .+|++++++..+. +...+ +...  ..+..    |+.+....++|++|+++|
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~G-a~Vi~~~~~~~~~-~~~~~-lGa~--~v~~~~~~~~~~~~~~~~~D~vid~~g  252 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMG-AETYVISRSSRKR-EDAMK-MGAD--HYIATLEEGDWGEKYFDTFDLIVVCAS  252 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHT-CEEEEEESSSTTH-HHHHH-HTCS--EEEEGGGTSCHHHHSCSCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEcCCHHHH-HHHHH-cCCC--EEEcCcCchHHHHHhhcCCCEEEECCC
Confidence            5789999999 999999999998899 7899999865332 22222 2211  12221    111111147999999987


Q ss_pred             C
Q 022414          107 P  107 (297)
Q Consensus       107 ~  107 (297)
                      .
T Consensus       253 ~  253 (360)
T 1piw_A          253 S  253 (360)
T ss_dssp             C
T ss_pred             C
Confidence            5

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=95.56  E-value=0.01  Score=51.88  Aligned_cols=37  Identities=16%  Similarity=0.174  Sum_probs=32.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++.+|+|+||+|.+|...++.+...| .+|++++++.
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~  255 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSA  255 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCH
Confidence            357999999999999999999999999 8888888743

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=95.51  E-value=0.04  Score=47.69  Aligned_cols=35  Identities=23%  Similarity=0.412  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ..|+|.|.| +|++|..++..|.+ | ++|++.+++..
T Consensus        35 ~~mkIaVIG-lG~mG~~lA~~La~-G-~~V~~~D~~~~   69 (432)
T 3pid_A           35 EFMKITISG-TGYVGLSNGVLIAQ-N-HEVVALDIVQA   69 (432)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHT-T-SEEEEECSCHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHc-C-CeEEEEecCHH
Confidence            358999999 69999999999887 8 99999998643

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=95.51  E-value=0.18  Score=41.19  Aligned_cols=90  Identities=19%  Similarity=0.196  Sum_probs=56.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEE-EEecCCCCCccchhhhcCCCceEEEecccCCcc-cCCcCEEEEccCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-LIEVDQIYHLACP  107 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~d~vi~~a~~  107 (297)
                      .+.++|+|.|+||..|+.+++.|.+.| ++++ .+.... ...+    .   .++..+ .++.+.. ..++|+++.+.. 
T Consensus         5 ~~~~~VaVvGasG~~G~~~~~~l~~~g-~~~v~~VnP~~-~g~~----i---~G~~vy-~sl~el~~~~~~Dv~Ii~vp-   73 (288)
T 1oi7_A            5 NRETRVLVQGITGREGQFHTKQMLTYG-TKIVAGVTPGK-GGME----V---LGVPVY-DTVKEAVAHHEVDASIIFVP-   73 (288)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTC-TTCE----E---TTEEEE-SSHHHHHHHSCCSEEEECCC-
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHcC-CeEEEEECCCC-CCce----E---CCEEee-CCHHHHhhcCCCCEEEEecC-
Confidence            356899999999999999999999998 7755 343321 1111    0   123322 2222211 126899887652 


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCe-EEEEec
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTST  147 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-~v~~Ss  147 (297)
                                       -..+..+++.|.+.|++ ++.+++
T Consensus        74 -----------------~~~~~~~~~ea~~~Gi~~vVi~t~   97 (288)
T 1oi7_A           74 -----------------APAAADAALEAAHAGIPLIVLITE   97 (288)
T ss_dssp             -----------------HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred             -----------------HHHHHHHHHHHHHCCCCEEEEECC
Confidence                             22466888888889997 555554

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=95.46  E-value=0.014  Score=48.41  Aligned_cols=56  Identities=14%  Similarity=0.143  Sum_probs=30.1

Q ss_pred             CcccccCCCCCCCCCCCCCCccccccccccCCCEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecC
Q 022414            1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY   66 (297)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~   66 (297)
                      |.+.+++..|..+..-+.     .   +.+.+|+|.|+| .|.+|..+++.|.+.| + +|++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~-----~---~~~~~~~I~iIG-~G~mG~~~A~~L~~~G-~~~V~~~dr~   57 (312)
T 3qsg_A            1 MHHHHHHSSGVDLGTENL-----Y---FQSNAMKLGFIG-FGEAASAIASGLRQAG-AIDMAAYDAA   57 (312)
T ss_dssp             --------------------------------CEEEEEC-CSHHHHHHHHHHHHHS-CCEEEEECSS
T ss_pred             CCcccccccccccCcccc-----c---ccCCCCEEEEEC-ccHHHHHHHHHHHHCC-CCeEEEEcCC
Confidence            345556666655544431     1   123468999999 6999999999999999 8 99999985

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.44  E-value=0.015  Score=48.37  Aligned_cols=67  Identities=12%  Similarity=0.112  Sum_probs=44.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ..+|+|.|+| .|.+|..+++.|.+.| ++|++.+|+...    ...+.. .++... .|+ .....++|+||.+.
T Consensus        29 ~~~~~I~iIG-~G~mG~~~a~~l~~~G-~~V~~~dr~~~~----~~~l~~-~g~~~~-~~~-~e~~~~aDvVi~~v   95 (320)
T 4dll_A           29 PYARKITFLG-TGSMGLPMARRLCEAG-YALQVWNRTPAR----AASLAA-LGATIH-EQA-RAAARDADIVVSML   95 (320)
T ss_dssp             CCCSEEEEEC-CTTTHHHHHHHHHHTT-CEEEEECSCHHH----HHHHHT-TTCEEE-SSH-HHHHTTCSEEEECC
T ss_pred             cCCCEEEEEC-ccHHHHHHHHHHHhCC-CeEEEEcCCHHH----HHHHHH-CCCEee-CCH-HHHHhcCCEEEEEC
Confidence            3568999998 6999999999999999 999999985432    222211 133221 111 12345688888776

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=95.39  E-value=0.11  Score=37.65  Aligned_cols=86  Identities=16%  Similarity=0.151  Sum_probs=53.3

Q ss_pred             CCEEEEEcCC---chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .++|.|.|++   |.+|..+++.|++.| ++|+.+.++...  +..      .++.. ..++.+. ...+|+++-+... 
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vnp~~~g--~~i------~G~~~-~~sl~el-~~~~Dlvii~vp~-   80 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVSPKVAG--KTL------LGQQG-YATLADV-PEKVDMVDVFRNS-   80 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEECSSSTT--SEE------TTEEC-CSSTTTC-SSCCSEEECCSCS-
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeCCcccc--ccc------CCeec-cCCHHHc-CCCCCEEEEEeCH-
Confidence            6889999998   889999999999999 887776653210  111      12221 1233322 2468988876521 


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEe
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS  146 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~S  146 (297)
                                       .....+++.|.+.|++-+++.
T Consensus        81 -----------------~~v~~v~~~~~~~g~~~i~i~  101 (145)
T 2duw_A           81 -----------------EAAWGVAQEAIAIGAKTLWLQ  101 (145)
T ss_dssp             -----------------THHHHHHHHHHHHTCCEEECC
T ss_pred             -----------------HHHHHHHHHHHHcCCCEEEEc
Confidence                             124455555666788545443

>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=95.35  E-value=0.096  Score=43.66  Aligned_cols=32  Identities=25%  Similarity=0.444  Sum_probs=27.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEec
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDN   65 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r   65 (297)
                      +||.|.|+ |++|+.+++.|.++  ...+|+++..
T Consensus         1 ~kVgI~G~-G~iGr~llR~l~~~~~p~~eivain~   34 (332)
T 1hdg_O            1 ARVAINGF-GRIGRLVYRIIYERKNPDIEVVAIND   34 (332)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhCCCCCeEEEEEEc
Confidence            47999999 99999999999987  5578877654

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=95.34  E-value=0.082  Score=45.87  Aligned_cols=35  Identities=17%  Similarity=0.128  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .+.+|.|.| .||+|..++..|.+.| ++|++++.+.
T Consensus        20 ~m~~IaViG-lGYVGLp~A~~~A~~G-~~V~g~Did~   54 (444)
T 3vtf_A           20 HMASLSVLG-LGYVGVVHAVGFALLG-HRVVGYDVNP   54 (444)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHT-CEEEEECSCH
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCC-CcEEEEECCH
Confidence            367899998 8999999999999999 9999999864

>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A

Probab=95.32  E-value=0.15  Score=43.24  Aligned_cols=32  Identities=25%  Similarity=0.489  Sum_probs=26.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhc--CCCeEEEEec
Q 022414           33 MRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDN   65 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~--g~~~v~~~~r   65 (297)
                      +||.|.|+ |.||+.+++.|.++  ...+|+++..
T Consensus         3 ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaInd   36 (380)
T 2d2i_A            3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINN   36 (380)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEEC
T ss_pred             cEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEec
Confidence            68999999 99999999999987  4467776654

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=95.32  E-value=0.075  Score=38.30  Aligned_cols=88  Identities=14%  Similarity=0.016  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCC---chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           31 SNMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        31 ~~~~ilItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ..++|+|.|+|   |-+|..+++.|.+.| ++|+.+...  ...+.+      .++.. ..++.+. ...+|.++-+.. 
T Consensus        12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vnp~--~~~~~i------~G~~~-~~sl~el-~~~vDlavi~vp-   79 (140)
T 1iuk_A           12 QAKTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVNPR--FQGEEL------FGEEA-VASLLDL-KEPVDILDVFRP-   79 (140)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEECGG--GTTSEE------TTEEC-BSSGGGC-CSCCSEEEECSC-
T ss_pred             CCCEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeCCC--cccCcC------CCEEe-cCCHHHC-CCCCCEEEEEeC-
Confidence            46899999999   889999999999999 886665442  101111      12211 1223222 236898887652 


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                                       -.....+++.|.+.|++.+++.+
T Consensus        80 -----------------~~~~~~v~~~~~~~gi~~i~~~~  102 (140)
T 1iuk_A           80 -----------------PSALMDHLPEVLALRPGLVWLQS  102 (140)
T ss_dssp             -----------------HHHHTTTHHHHHHHCCSCEEECT
T ss_pred             -----------------HHHHHHHHHHHHHcCCCEEEEcC
Confidence                             12345666777788885444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	297
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-97
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-72
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-64
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-60
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	4e-49
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-49
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-47
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-44
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-44
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-43
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-42
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-38
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	4e-38
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-31
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-30
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-29
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	7e-23
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	8e-19
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	4e-18
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	8e-18
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-17
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	1e-15
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-14
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	3e-14
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	2e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-12
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	9e-11
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-10
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	2e-08
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	6e-07
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	3e-04
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	0.002

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  287 bits (736), Expect = 2e-97
 Identities = 174/253 (68%), Positives = 209/253 (82%), Gaps = 1/253 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 3   RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 61

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 62  LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 121

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 122 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 181

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 182 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 241

Query: 274 FTMLELAENVKEV 286
            T+LE A+ +K +
Sbjct: 242 HTILEFAQLIKNL 254

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  223 bits (570), Expect = 7e-72
 Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 26/281 (9%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
           M+IL+TGGAGFIGS +V  +++N ++ V+ +D   + G+ ++L       R+     D+ 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60

Query: 92  EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---- 140
           +   I         D + HLA  +        P   I+TN++GT  +L +A++  +    
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 141 ------RILLTSTSEVYGDPLVHPQDES-----YWGNVNPIGVRSCYDEGKRVAETLMFD 189
                 R    ST EVYGD     + E+      +         S Y   K  ++ L+  
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD 249
           + R +G+   +    N YGP    +  +++   I  A+ G+PL +   G Q R + YV D
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238

Query: 250 MVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKEVNFY 289
               L  ++     G   NIG   E   L++   + ++   
Sbjct: 239 HARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDE 279

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  203 bits (517), Expect = 2e-64
 Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 20/267 (7%)

Query: 33  MRILVTGGAGFIGSHLVDKLMEN-----EKNEVIVVDNY-FTGSKDNLRKWIGHPRFELI 86
           MR+LVTGGAGFIGSH V +L+         +EVIV+D+  + G++ NL      PR   +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 87  RHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A 140
             D+ +  L+       D I H A  +             +TNV GT  +L  A   G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120

Query: 141 RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
           R++  ST++VYG        ES     +P+   S Y   K  ++ +   YHR +G+++RI
Sbjct: 121 RVVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175

Query: 201 ARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
            R  N YGP  + +  +++  F+   + G  L +   G   R + +  D   G+  ++ G
Sbjct: 176 TRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG 233

Query: 261 ENTGPI-NIGNPGEFTMLELAENVKEV 286
              G I +IG   E T  EL   + + 
Sbjct: 234 GRAGEIYHIGGGLELTNRELTGILLDS 260

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  194 bits (494), Expect = 1e-60
 Identities = 59/267 (22%), Positives = 104/267 (38%), Gaps = 25/267 (9%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKW--IGHPRFELIR 87
             L+TG  G  GS+L + L+E    EV  +      + T   D++ +     +P+F L  
Sbjct: 3   VALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 88  HDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG- 139
            D+++   +         D++Y+L   +       +P  T   + +GTL +L   + +G 
Sbjct: 62  GDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGL 121

Query: 140 ---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
               R    STSE+YG     PQ E+      P   RS Y   K  A  +  +Y   +G+
Sbjct: 122 EKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGM 176

Query: 197 EIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGL 254
                 +FN   PR       R ++  IA   +G             R + +  D V   
Sbjct: 177 YACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236

Query: 255 IRLMEGENTGPINIGNPGEFTMLELAE 281
             +++ E      I    ++++ +  E
Sbjct: 237 WMMLQQEQPEDFVIATGVQYSVRQFVE 263

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  163 bits (413), Expect = 4e-49
 Identities = 58/275 (21%), Positives = 98/275 (35%), Gaps = 32/275 (11%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  R+ + G  G +GS +  +L +   +  +V+       +D L         +    + 
Sbjct: 1   AKQRVFIAGHRGMVGSAIRRQLEQ-RGDVELVLRT-----RDELNLLDSRAVHDFFASE- 53

Query: 91  TEPLLIEVDQIYHLACPASP-IFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTS 148
                  +DQ+Y  A      +     P   I  N++   N++  A +    ++L   +S
Sbjct: 54  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 107

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
            +Y      P  ES             Y   K     L   Y+RQ+G + R     N YG
Sbjct: 108 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 167

Query: 209 PRMNIDDGR-------VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
           P  N            +     A A +   + V   GT  R F +V DM    I +ME  
Sbjct: 168 PHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 227

Query: 262 NT----------GPINIGNPGEFTMLELAENVKEV 286
           +             IN+G   + T+ ELA+ + +V
Sbjct: 228 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKV 262

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  164 bits (415), Expect = 5e-49
 Identities = 62/257 (24%), Positives = 100/257 (38%), Gaps = 15/257 (5%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
             I+VTGGAGFIGS+ V  +  N  +  V V+D           + I   R EL+  D+ 
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIA 62

Query: 92  EPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
           +  L++      D I H A  +       +P   I TN IGT  +L  A++   R    S
Sbjct: 63  DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVS 122

Query: 147 TSEVYGD-------PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
           T EVYGD       P         +         S Y   K  ++ ++  + R  G++  
Sbjct: 123 TDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKAT 182

Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           I+   N YGP  +I+  + +   I   + G    +   G   R + + +D   G+  ++ 
Sbjct: 183 ISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT 240

Query: 260 GENTGPINIGNPGEFTM 276
               G   +        
Sbjct: 241 KGRMGETYLIGADGEKN 257

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  159 bits (403), Expect = 2e-47
 Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 23/278 (8%)

Query: 26  SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW------IG 79
            +        L+TG AGFIGS+L++ L++    +V+ +DN+ TG + NL +         
Sbjct: 10  KELPAQPKVWLITGVAGFIGSNLLETLLK-LDQKVVGLDNFATGHQRNLDEVRSLVSEKQ 68

Query: 80  HPRFELIRHDVTEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
              F+ I+ D+            VD + H A   S      +P+ +  TN+ G LNML  
Sbjct: 69  WSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIA 128

Query: 135 AKRVGARILL-TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
           A+    +     ++S  YGD    P+ E   G        S Y   K V E     + R 
Sbjct: 129 ARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGK-----PLSPYAVTKYVNELYADVFSRC 183

Query: 194 HGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
           +G      R FN +G R + +     V+  + +  I+G+ + +   G  +R FCY+ + V
Sbjct: 184 YGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV 243

Query: 252 DGLIRLME---GENTGPINIGNPGEFTMLELAENVKEV 286
              +              NI   G  ++ +L   +++ 
Sbjct: 244 QANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDG 281

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  152 bits (385), Expect = 2e-44
 Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 15/279 (5%)

Query: 19  TPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW 77
           T   L   +++ S N++I +TG  GFI SH+  +L   E + VI  D       +++ + 
Sbjct: 1   TYKELEREQYWPSENLKISITGAGGFIASHIARRLKH-EGHYVIASDWK---KNEHMTED 56

Query: 78  IGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTI----KTNVIGTLNMLG 133
           +    F L+   V E  L   + + H+   A+ +                N + + NM+ 
Sbjct: 57  MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIE 116

Query: 134 LAKRVG-ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
            A+  G  R    S++ +Y     L          +  P   +  +   K   E L   Y
Sbjct: 117 AARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHY 176

Query: 191 HRQHGIEIRIARIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTVQAPGTQTRSFCYV 247
           ++  GIE RI R  N YGP      GR     +         +   +   G QTRSF ++
Sbjct: 177 NKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFI 236

Query: 248 SDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
            + V+G++RL + +   P+NIG+    +M E+AE V   
Sbjct: 237 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSF 275

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (383), Expect = 2e-44
 Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 26/262 (9%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKWIG---HPRFELIR 87
            L+TG  G  GS+L + L+E    EV  +      + TG  ++L K          +L  
Sbjct: 4   ALITGITGQDGSYLAEFLLEK-GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHY 62

Query: 88  HDVTEPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG- 139
            D+T+   +       +  +IY+L   +           T   + +GTL +L   K  G 
Sbjct: 63  GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL 122

Query: 140 ---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
               +    STSE+YG     PQ E+      P   RS Y   K  A  ++ ++   + +
Sbjct: 123 INSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNFREAYNL 177

Query: 197 EIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL 254
                 +FN   PR   +    ++  +     +              R + +  D V+ +
Sbjct: 178 FAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 237

Query: 255 IRLMEGENTGPINIGNPGEFTM 276
             +++ +      I      ++
Sbjct: 238 WLMLQNDEPEDFVIATGEVHSV 259

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score =  148 bits (375), Expect = 3e-43
 Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 35/284 (12%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDV 90
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L   + +G      +  D+
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDI 59

Query: 91  TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RI 142
               L+        +D + H A   +       P++    NV GTL ++   +       
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIA 201
           + +S++ VYGD    P  ES+         +S Y + K + E ++ D  +      I + 
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTP----QSPYGKSKLMVEQILTDLQKAQPDWSIALL 175

Query: 202 RIFNTYGPRMNIDDG-------RVVSNFIAQAI--RGEPLTV------QAPGTQTRSFCY 246
           R FN  G   + D G         +  +IAQ    R + L +         GT  R + +
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235

Query: 247 VSDMVDGLI----RLMEGENTGPINIGNPGEFTMLELAENVKEV 286
           V D+ DG +    +L         N+G     ++L++     + 
Sbjct: 236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKA 279

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  146 bits (368), Expect = 2e-42
 Identities = 49/255 (19%), Positives = 95/255 (37%), Gaps = 18/255 (7%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTE 92
             LVTG  G  G++L   L+E     V  +     + ++  LR+       +    D+ +
Sbjct: 2   SALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 93  PLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARIL 143
              +       +  ++Y+LA  +        PV T   + +G  ++L   ++     R  
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 120

Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
             STSE++G      QDE+      P   RS Y   K     +  +Y    G+      +
Sbjct: 121 QASTSEMFGLIQAERQDEN-----TPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGIL 175

Query: 204 FNTYGPRMNID-DGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
           FN   P   I+   R V++ +A+   G +           R + +  D V+ +  +++ +
Sbjct: 176 FNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 235

Query: 262 NTGPINIGNPGEFTM 276
                 +      T+
Sbjct: 236 KADDYVVATGVTTTV 250

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  136 bits (343), Expect = 2e-38
 Identities = 58/287 (20%), Positives = 108/287 (37%), Gaps = 37/287 (12%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDVTE 92
           +LVTGGAG+IGSH V +L+EN   + +V DN    + D++   + +          D+ +
Sbjct: 4   VLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 62

Query: 93  PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL- 144
              +E       +D + H A   +       P++    N++GT+ +L L ++      + 
Sbjct: 63  RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVF 122

Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR--QHGIEIRIAR 202
           +S++ VYGD    P          P+G  + Y   K   E ++ D +   +   +  I R
Sbjct: 123 SSSATVYGDATRFPNMIPIPEE-CPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILR 181

Query: 203 IFNTYGPRMNIDDG--------RVVSNFIAQAI-RGEPLTVQAPGTQTRSFCYVSDMVDG 253
            FN  G   +   G         ++      A+ R E L +      +R    + D +  
Sbjct: 182 YFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV 241

Query: 254 LIRLMEGENTG--------------PINIGNPGEFTMLELAENVKEV 286
           +                          N+G+    T+ E+     + 
Sbjct: 242 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKA 288

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score =  135 bits (340), Expect = 4e-38
 Identities = 65/285 (22%), Positives = 108/285 (37%), Gaps = 33/285 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTE 92
           ++L+TGG GF+GS+L    +     ++IV DN    G+ DNL        FE +  D+  
Sbjct: 2   KLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 60

Query: 93  PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA--KRVGARIL 143
              +         D  +HLA   +      NP    + NV GTLN+L           I+
Sbjct: 61  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120

Query: 144 LTSTSEVYGDPLVHPQDESYWGNVN-----------PIGVRSCYDEGKRVAETLMFDYHR 192
            +ST++VYGD   +  +E+                  +   S Y   K  A+  M DY R
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180

Query: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFI------AQAIRGEPLTVQAPGTQTRSFCY 246
             G+   + R  + YG R      +    +        +    +P T+   G Q R   +
Sbjct: 181 IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240

Query: 247 VSDMVDGLIRLMEGENTGP-----INIGNPGEFTMLELAENVKEV 286
             DM+      +   +        I        ++LEL + +++ 
Sbjct: 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDY 285

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  117 bits (293), Expect = 2e-31
 Identities = 43/255 (16%), Positives = 83/255 (32%), Gaps = 27/255 (10%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLR---KWIGHPRFELI 86
             L+TG  G  GS+L + L+  +  EV  +      + T   +++      +     +L 
Sbjct: 3   IALITGITGQDGSYLTEFLLG-KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 87  RHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
             D+T+   +         D++Y+LA  +        P  T      G L +L   +   
Sbjct: 62  YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT 121

Query: 140 AR-----ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
                      + S         PQ E+      P   RS Y   K  A     +Y   +
Sbjct: 122 IDSGRTVKYYQAGSSEMFGSTPPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAY 176

Query: 195 GIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD 252
           G+      +FN   PR   +    ++        +  +          +R + +  D V+
Sbjct: 177 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 236

Query: 253 GLIRLMEGENTGPIN 267
            +  +++ E      
Sbjct: 237 AMWLMLQQEKPDDYV 251

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (287), Expect = 2e-30
 Identities = 61/288 (21%), Positives = 109/288 (37%), Gaps = 39/288 (13%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--------KWIGHPRFEL 85
           ++LVTGGAG+IGSH V +L+E      +V+DN+    +            + +     E 
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEA-GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62

Query: 86  IRHDVTEPLLIEVDQ-------IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
              D+ +   ++          + H A   +       P+   + N+ GT+ +L + K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122

Query: 139 GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY-HRQHGIE 197
           G + L+ S+S        +PQ           G  + Y + K   E ++ D         
Sbjct: 123 GVKNLVFSSSATVYG---NPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWN 179

Query: 198 IRIARIFNTYGPRMNIDDGR--------VVSNFIAQAI-RGEPLTV------QAPGTQTR 242
             + R FN  G   +   G         ++      AI R E L V         GT  R
Sbjct: 180 AVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR 239

Query: 243 SFCYVSDMVDGLIR----LMEGENTGPINIGNPGEFTMLELAENVKEV 286
            + +V D+  G I     L E       N+G    +++L++ + +++ 
Sbjct: 240 DYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKA 287

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score =  112 bits (279), Expect = 4e-29
 Identities = 58/324 (17%), Positives = 109/324 (33%), Gaps = 68/324 (20%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS------------------KD 72
           S+MR+LV GGAG+IGSH V  L+ +  + V++VD+                        D
Sbjct: 1   SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD 60

Query: 73  NLRKWIGHPRFELIRHDVTEPLLIE--------VDQIYHLACPASPIFYKYNPVKTIKTN 124
             +         L   DV     +         +D + H+    +      +P+K    N
Sbjct: 61  GPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNN 120

Query: 125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV---RSCYDEGKR 181
           V+G L +L          ++ S+S             +    ++        S Y E K 
Sbjct: 121 VVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKL 180

Query: 182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG-------RVVSNFIAQAIR------ 228
           +AE ++ D    +GI+    R FN  G   + D G        ++   + + +       
Sbjct: 181 IAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240

Query: 229 ----------GEPLTV------QAPGTQTRSFCYVSDMVDGLIRL----------MEGEN 262
                      + + +         GT  R + +V D+    I             + + 
Sbjct: 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKY 300

Query: 263 TGPINIGNPGEFTMLELAENVKEV 286
               N+G    +++ E+ E  ++ 
Sbjct: 301 FSVFNLGTSRGYSVREVIEVARKT 324

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 94.3 bits (232), Expect = 7e-23
 Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 23/273 (8%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
           MR+L+ G  GFIG+HL ++L+  +  EV  +D       D + +++ HP F  +  D++ 
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG----SDAISRFLNHPHFHFVEGDISI 56

Query: 92  -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
                E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  S
Sbjct: 57  HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGV--RSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           TSEVYG       DE +   +       R  Y   K++ + +++ Y  + G++  + R F
Sbjct: 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 176

Query: 205 NTYGPRMNID------DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
           N  GPR++          R ++  I   + G P+ +   G Q R F  + D ++ L R++
Sbjct: 177 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 236

Query: 259 EGENTGPIN-----IGNPGEFTMLELAENVKEV 286
           E                  E ++ EL E +   
Sbjct: 237 ENAGNRCDGEIINIGNPENEASIEELGEMLLAS 269

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 82.9 bits (203), Expect = 8e-19
 Identities = 38/279 (13%), Positives = 87/279 (31%), Gaps = 28/279 (10%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP----RFELIRHD 89
            +LVTG  GF+ SH+V++L+E+         +       NL+K             +  D
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARS--ASKLANLQKRWDAKYPGRFETAVVED 70

Query: 90  VTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
           + +    +  +     +A  AS + +     + +   + GTLN L  A    +      T
Sbjct: 71  MLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLT 130

Query: 148 SEVYGDPLVHPQDESYWGNV-----------------NPIGVRSCYDEGKRVAETLMFDY 190
           S      +  P  E  + +                  +P      Y   K  AE   + +
Sbjct: 131 SSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKF 190

Query: 191 HRQHGIEIRIARIFNT--YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS 248
             ++     +  +      G   + +     ++    ++    ++        + +    
Sbjct: 191 MDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAV 250

Query: 249 DMVDGLIRLME-GENTGPINIGNPGEFTMLELAENVKEV 286
           D+    +  +   +       G  G F    +    +++
Sbjct: 251 DIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKL 289

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 80.6 bits (197), Expect = 4e-18
 Identities = 25/263 (9%), Positives = 67/263 (25%), Gaps = 31/263 (11%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS---KDNLRKWIGHPRFELI 86
               R+L+ GG G+IG  +V+  +    +   V+      S   K  +  +      +LI
Sbjct: 1   DKKSRVLIVGGTGYIGKRIVNASIS-LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 59

Query: 87  RHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
              + +   +           ++      +     +  +     +  + +    +  L S
Sbjct: 60  EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKL-----VEAIKEAGNIKRFLPS 114

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
              +  D + H                        + +  +        I          
Sbjct: 115 EFGMDPDIMEHALQPGSI---------------TFIDKRKVRRAIEAASIPYTYVSSNMF 159

Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP- 265
            G       G +           + + +   G     +    D+    I+ ++   T   
Sbjct: 160 AGYF----AGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNK 215

Query: 266 --INIGNPGEFTMLELAENVKEV 286
                      +  E+ +  + +
Sbjct: 216 TMYIRPPMNILSQKEVIQIWERL 238

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 80.3 bits (196), Expect = 8e-18
 Identities = 38/239 (15%), Positives = 71/239 (29%), Gaps = 17/239 (7%)

Query: 26  SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
           + F+Q   R+ VTG  GF G  L   L       V                       + 
Sbjct: 3   NSFWQ-GKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETARVADGMQS 60

Query: 86  IRHDVTEPLLIEVDQ-------IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL---- 134
              D+ +   +           ++H+A           PV+T  TNV+GT+ +L      
Sbjct: 61  EIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHV 120

Query: 135 AKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV---AETLMFDYH 191
                   + +       + +   ++    G  +P        E               +
Sbjct: 121 GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANY 180

Query: 192 RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
            QHG  +   R  N  G      D R+V + +    + +P+ ++ P         +  +
Sbjct: 181 GQHGTAVATVRAGNVIGGGDWALD-RIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPL 238

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 79.1 bits (193), Expect = 1e-17
 Identities = 26/263 (9%), Positives = 66/263 (25%), Gaps = 38/263 (14%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR----KWIGHPRFELI 86
           S  RIL+ G  G+IG H+    ++   +   ++    T S ++ +    +        ++
Sbjct: 2   SRSRILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKASGANIV 60

Query: 87  RHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
              + +   +           ++    +      I                  A   + +
Sbjct: 61  HGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIK----------------AIKEVGT 104

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
               +     +  D  +                       +       GI          
Sbjct: 105 VKRFFPSEFGNDVDNVHAVEPAKSVFEVKAK---------VRRAIEAEGIPYTYVSSNCF 155

Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG-- 264
            G  +     R ++     A   + + +   G     F    D+    I+ ++   T   
Sbjct: 156 AGYFL-----RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNK 210

Query: 265 -PINIGNPGEFTMLELAENVKEV 286
                      ++ EL    ++ 
Sbjct: 211 TLYLRLPANTLSLNELVALWEKK 233

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 73.5 bits (178), Expect = 1e-15
 Identities = 45/256 (17%), Positives = 80/256 (31%), Gaps = 6/256 (2%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           I+VTGGAGFIGS++V  L +    +++VVDN   G+K      + +    + + D    +
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-NIADYMDKEDFLIQI 60

Query: 95  LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDP 154
           +   +     A                            L      R             
Sbjct: 61  MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--IPFLYASSAA 118

Query: 155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID 214
               +   +  +       + Y   K + +  +     +   +I   R FN YGPR    
Sbjct: 119 TYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHK 178

Query: 215 DGRVVSNFIAQAIRGEPLTVQAPG---TQTRSFCYVSDMVDGLIRLMEGENTGPINIGNP 271
                  F          + +         R F YV D+ D  +  +E   +G  N+G  
Sbjct: 179 GSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTG 238

Query: 272 GEFTMLELAENVKEVN 287
              +   +A+     +
Sbjct: 239 RAESFQAVADATLAYH 254

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 69.5 bits (168), Expect = 2e-14
 Identities = 35/264 (13%), Positives = 72/264 (27%), Gaps = 22/264 (8%)

Query: 31  SNM-RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRH 88
           +N+  +LVTG +G  G  +  KL E   ++ +      +    + +         ++   
Sbjct: 1   ANLPTVLVTGASGRTGQIVYKKLKEG-SDKFVAKGLVRSAQGKEKIGGEADVFIGDITDA 59

Query: 89  DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148
           D   P    +D +  L      +   ++P K  +   I              +      +
Sbjct: 60  DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA 119

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
           +V G         S  G      +    +    V +     Y    G    I R      
Sbjct: 120 KVAGVK-HIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLD 178

Query: 209 PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG--PI 266
                  G V    + +                      +D+ +  I+ +  E       
Sbjct: 179 KE-----GGVRELLVGKD--------DELLQTDTKTVPRADVAEVCIQALLFEEAKNKAF 225

Query: 267 NIGNPGEFT---MLELAENVKEVN 287
           ++G+  E T     +      +V 
Sbjct: 226 DLGSKPEGTSTPTKDFKALFSQVT 249

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 69.1 bits (167), Expect = 3e-14
 Identities = 41/256 (16%), Positives = 83/256 (32%), Gaps = 34/256 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRKWIGHPRFELIRHDV 90
           M+IL+TG  G +G  +  +L + +  EVI  D       +   + K+    +        
Sbjct: 2   MKILITGANGQLGREIQKQL-KGKNVEVIPTDVQDLDITNVLAVNKFFNEKKP------- 53

Query: 91  TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV 150
                   + + + A   +    +       K N IG  N+   A  VGA I+  ST  V
Sbjct: 54  --------NVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYV 105

Query: 151 YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR 210
           +      P  E    N      ++  +            + +    +  I R    YG  
Sbjct: 106 FDGEAKEPITEFDEVNPQSAYGKTKLEGEN---------FVKALNPKYYIVRTAWLYGDG 156

Query: 211 MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN 270
            N     +        ++           Q  +     D+   ++++++ +N G  +   
Sbjct: 157 NNFVKTMINLGKTHDELKV-------VHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCTC 209

Query: 271 PGEFTMLELAENVKEV 286
            G  +  + A  +  +
Sbjct: 210 KGICSWYDFAVEIFRL 225

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 67.7 bits (163), Expect = 2e-13
 Identities = 62/316 (19%), Positives = 94/316 (29%), Gaps = 57/316 (18%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR----------------- 75
            R++V GG G+ G      L +    EV +VDN      D+                   
Sbjct: 2   SRVMVIGGDGYCGWATALHLSKK-NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60

Query: 76  -KWIGHPRFELIRHDVTEPLLIE----------VDQIYHLACPASPIFYKYNPVKTIKTN 124
            K +     EL   D+ +   +           V            +  +   V T   N
Sbjct: 61  WKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNN 120

Query: 125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNV----------NPIGVRS 174
           VIGTLN+L   K  G    L     +      +   E  +  +           P    S
Sbjct: 121 VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASS 180

Query: 175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD---------------GRVV 219
            Y   K      +    +  GI          YG + +  +               G  +
Sbjct: 181 FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240

Query: 220 SNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI---NIGNPGEFTM 276
           + F  QA  G PLTV   G QTR +  + D V  +   +                 +F++
Sbjct: 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSV 300

Query: 277 LELAENVKEVNFYLGR 292
            ELA  V +    LG 
Sbjct: 301 NELASLVTKAGSKLGL 316

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (151), Expect = 2e-12
 Identities = 26/234 (11%), Positives = 61/234 (26%), Gaps = 42/234 (17%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  +I + G  G  G   + + ++    EV V+    +       +       ++++   
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQ-AGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAAD 60

Query: 91  TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSE 149
            +  +   D +  L           N +        G  N++   K  G   ++  +++ 
Sbjct: 61  VDKTVAGQDAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF 113

Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
           +  DP   P       +                    M    R+ G++            
Sbjct: 114 LLWDPTKVPPRLQAVTD----------------DHIRMHKVLRESGLKYVAVMP------ 151

Query: 210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
                        I         TV   G          D+   ++R +  +  
Sbjct: 152 -----------PHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEY 194

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 59.2 bits (141), Expect = 9e-11
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 11/163 (6%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M IL+ G  G +G  L   L       +I +D +      +          + +   V +
Sbjct: 1   MNILLFGKTGQVGWELQRSL--APVGNLIALDVHSKEFCGDFSN------PKGVAETVRK 52

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
              +  D I + A   +    +  P      N      +   A   GA ++  ST  V+ 
Sbjct: 53  ---LRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFP 109

Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
                P  E+   +   +  ++     K + +        +  
Sbjct: 110 GTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTS 152

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 57.7 bits (138), Expect = 4e-10
 Identities = 29/265 (10%), Positives = 60/265 (22%), Gaps = 31/265 (11%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
           Q    I V G  G  G+ L+        +    V +          +    P   L +  
Sbjct: 1   QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHS---LKGLIAEELQAIPNVTLFQGP 57

Query: 90  VTEP--LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
           +     L+  + +  HLA   +               +    ++   AKR G        
Sbjct: 58  LLNNVPLMDTLFEGAHLAFINTTSQAGD--------EIAIGKDLADAAKRAGT------- 102

Query: 148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
                   +     S   + +  G                +            A I+N  
Sbjct: 103 --------IQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNN 154

Query: 208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPIN 267
              +     ++            P     P     +   V   +  + +    +  G   
Sbjct: 155 FTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRI 214

Query: 268 IGNPGEFTMLELAENVKEVNFYLGR 292
                  + +++          L R
Sbjct: 215 ALTFETLSPVQVCAAFSRA---LNR 236

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (122), Expect = 2e-08
 Identities = 24/255 (9%), Positives = 64/255 (25%), Gaps = 32/255 (12%)

Query: 27  KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELI 86
            F   N  + + G +G  G  L+ +++E      + +                  R +L 
Sbjct: 9   DFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIG----------------RRKLT 52

Query: 87  RHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
             +     + +    +      +  F  ++          G     G  +     +L ++
Sbjct: 53  FDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSA 112

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
                G         S   + +       Y + K   E  + +          + R    
Sbjct: 113 ELAKAGGCKHFNLLSSKGADKSS---NFLYLQVKGEVEAKVEELKFDRYS---VFRPGVL 166

Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI 266
              R     G  +      ++             +     V  +V  ++  +       +
Sbjct: 167 LCDRQESRPGEWLVRKFFGSLPD--------SWASGHSVPVVTVVRAMLNNVVRPRDKQM 218

Query: 267 NIGNPGEFTMLELAE 281
            +       + +L +
Sbjct: 219 ELLENKA--IHDLGK 231

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.1 bits (110), Expect = 6e-07
 Identities = 30/237 (12%), Positives = 66/237 (27%), Gaps = 38/237 (16%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           R+L+ G  G  G HL+D+++       ++       ++  L +            ++   
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVIAP-----ARKALAEHPRLDNPVGPLAELLPQ 58

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L   +D  +                + +  ++   +                        
Sbjct: 59  LDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGK-----------------RALEM 101

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
              H    S  G      +     +G+         + +       IAR    +GPR   
Sbjct: 102 GARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLT-----IARPSLLFGPREEF 156

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN 270
               +++  IA+ + G+   +              D+   L RL   E  G   + +
Sbjct: 157 RLAEILAAPIARILPGKYHGI-----------EACDLARALWRLALEEGKGVRFVES 202

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 39.1 bits (90), Expect = 3e-04
 Identities = 8/116 (6%), Positives = 23/116 (19%), Gaps = 6/116 (5%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
              + +V  G G +G      L       V+         +          +  +   + 
Sbjct: 22  KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKA-QAAADSVNKRFKVNVTAAET 80

Query: 91  T-----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
                    +     ++        +  +          ++   N        G  
Sbjct: 81  ADDASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGID 136

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 36.2 bits (82), Expect = 0.002
 Identities = 28/181 (15%), Positives = 61/181 (33%), Gaps = 16/181 (8%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHD 89
           +   +L+  G+GF+    +D L ++   +V V       +K          P    +  D
Sbjct: 1   ATKSVLM-LGSGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDD 58

Query: 90  VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----NMLGLAKRVGA----- 140
                 +    +     P +            K +V+ T      M+ L +         
Sbjct: 59  AALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITV 118

Query: 141 --RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
              I  ++ +++ G P          G ++  GV +      ++ + LM +   ++GIE 
Sbjct: 119 MNEIGYSAMAKLVGVPCAVAVKFVLDGTISDRGVLAP--MNSKINDPLMKELKEKYGIEC 176

Query: 199 R 199
           +
Sbjct: 177 K 177

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	297
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.97
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.97
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.96
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.95
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.95
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.94
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.92
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.9
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.89
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.87
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.86
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.86
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.85
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.85
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.85
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.85
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.85
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.85
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.85
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.85
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.85
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.84
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.84
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.84
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.84
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.84
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.84
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.84
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.83
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.83
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.83
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.83
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.82
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.82
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.82
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.82
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.82
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.82
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.82
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.81
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.81
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.81
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.81
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.8
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.8
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.79
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.79
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.79
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.79
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.79
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.78
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.77
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.77
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.77
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.76
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.76
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.75
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.74
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.74
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.73
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.72
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.71
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.7
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.69
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.67
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.67
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.65
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.64
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.63
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.63
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.62
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.6
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.6
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.46
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.45
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.09
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.39
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.38
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.37
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.33
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	98.31
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.3
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	98.29
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.26
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.25
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.17
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.12
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.03
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.02
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	98.0
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.0
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.99
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.98
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.97
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.93
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.93
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.89
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.88
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.86
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.83
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.83
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.82
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.82
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.8
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.79
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.79
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.78
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.75
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.71
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.59
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.58
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.54
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.51
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.4
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.37
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.35
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	97.34
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.24
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.24
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.19
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.15
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.05
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.02
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.01
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.96
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.91
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.9
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.9
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.84
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.71
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.68
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.67
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.67
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.66
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.63
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.62
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.54
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.53
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.29
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.28
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.28
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.26
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.24
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.16
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.0
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.99
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.91
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.84
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.75
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.74
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.7
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	95.69
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.67
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.66
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.64
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.62
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.58
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.57
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	95.55
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	95.49
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	95.49
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.48
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.44
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.43
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.43
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.34
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.26
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.22
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.2
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.18
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.17
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.13
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.12
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.11
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.09
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.05
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.99
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.96
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.93
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.91
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.87
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.82
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.82
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.78
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	94.72
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.72
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.62
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	94.56
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.54
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.42
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	94.29
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.28
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.26
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.23
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.18
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.13
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.12
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.09
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.03
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.94
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.86
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.69
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	93.67
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	93.62
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.61
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	93.54
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.37
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	93.3
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.22
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.16
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	93.11
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.04
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.96
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	92.89
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.75
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.65
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	92.61
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.55
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	92.47
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.22
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	92.19
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.06
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.76
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	91.75
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	91.73
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.69
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	91.64
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.61
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.57
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	91.5
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.34
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.04
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	91.01
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.88
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.86
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	90.78
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	90.71
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.58
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.49
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.33
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	90.29
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	90.25
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	90.08
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	90.0
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	89.86
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.29
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	89.27
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.05
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.33
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	87.76
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	87.38
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	87.02
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	86.9
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	86.85
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.53
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.35
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	86.23
d1m3sa_	186	Hypothetical protein YckF {Bacillus subtilis [TaxI	85.89
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	85.82
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	85.34
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	85.27
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	85.08
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	84.97
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	84.87
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	84.5
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	83.95
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	83.79
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	83.4
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.08
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	82.59
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	82.58
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	82.07
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	81.95
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	81.84
d1jeoa_	177	Probable 3-hexulose-6-phosphate isomerase MJ1247 {	81.28
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	80.9
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	80.86
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	80.76
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	80.52

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-45  Score=310.10  Aligned_cols=261  Identities=67%  Similarity=1.115  Sum_probs=237.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIF  112 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~~  112 (297)
                      |||||||||||||++|+++|+++| ++|+++++......+.+........++....|+.+....++|+|||+|+......
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~~~   80 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPN   80 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCchh
Confidence            799999999999999999999999 9999999866555555555555567899999998888889999999999876655


Q ss_pred             cccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHH
Q 022414          113 YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR  192 (297)
Q Consensus       113 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  192 (297)
                      ...++.+.+++|+.++.+|+++|++.++|+||+||.++|+.....+.+|+.+...++..|.+.|+.+|.++|.+++.+.+
T Consensus        81 ~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~  160 (312)
T d2b69a1          81 YMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK  160 (312)
T ss_dssp             HTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            66788899999999999999999999999999999999998888888888887778888999999999999999999999


Q ss_pred             HhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCccEEecCCC
Q 022414          193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPG  272 (297)
Q Consensus       193 ~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i~~~~  272 (297)
                      .++++++++||+.||||+.......+++.++..+..++++.+++++.+.++++|++|++++++.++++...+.||+++++
T Consensus       161 ~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~~~~~n~~~~~  240 (312)
T d2b69a1         161 QEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPE  240 (312)
T ss_dssp             HHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSCCSCEEESCCC
T ss_pred             HhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhccCCceEecCCc
Confidence            99999999999999999977666678999999999999999999999999999999999999999998889999999999


Q ss_pred             cccHHHHHHHHHHhhcccCcee
Q 022414          273 EFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       273 ~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      .+++.++++.+.+.+|.+..+.
T Consensus       241 ~~~~~~~~~~i~~~~~~~~~~~  262 (312)
T d2b69a1         241 EHTILEFAQLIKNLVGSGSEIQ  262 (312)
T ss_dssp             EEEHHHHHHHHHHHHTCCCCEE
T ss_pred             ccchhhHHHHHHHHhCCCCceE
Confidence            9999999999999999887654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1.2e-41  Score=287.25  Aligned_cols=253  Identities=30%  Similarity=0.422  Sum_probs=219.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCe------EEEEecCCCC-CccchhhhcCCCceEEEecccCCc-----ccCCcCE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNE------VIVVDNYFTG-SKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQ  100 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~------v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~  100 (297)
                      |||||||||||||++|++.|+++| +.      ++.+++.... ....+.......+++++++|+.+.     ....+|.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g-~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~   79 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGA-YPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDA   79 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTS-CTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC-CCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccce
Confidence            899999999999999999999998 53      4555443322 222333333456899999999875     3457999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHh
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      |+|+|+.........++.+.++.|+.++.+++++|++.++ +|||+||..+|+.....+++|+     ++..|.+.|+.+
T Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~-----~~~~p~~~Y~~s  154 (322)
T d1r6da_          80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAAS  154 (322)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTT-----SCCCCCSHHHHH
T ss_pred             EEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCC-----CCCCCCCHHHHH
Confidence            9999988776667788888999999999999999999998 8999999999999888888888     688899999999


Q ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHh
Q 022414          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (297)
Q Consensus       180 K~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  259 (297)
                      |.++|.+++.+.++++++++++||+.+|||+...  ..+++.++..+..++++.+++++++.++++|++|+|+++..+++
T Consensus       155 K~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~  232 (322)
T d1r6da_         155 KAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLA  232 (322)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc--CcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHh
Confidence            9999999999999999999999999999998644  35889999999999999999999999999999999999999999


Q ss_pred             cCC-CccEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          260 GEN-TGPINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       260 ~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      ++. ++.||+++++.+++.|+++.+.+.+|.+...
T Consensus       233 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~  267 (322)
T d1r6da_         233 GGRAGEIYHIGGGLELTNRELTGILLDSLGADWSS  267 (322)
T ss_dssp             HCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGG
T ss_pred             CCCCCCeeEEeecccchhHHHHHHHHHHhCCCccc
Confidence            987 6699999999999999999999999987543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.2e-41  Score=286.19  Aligned_cols=255  Identities=23%  Similarity=0.253  Sum_probs=210.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchh-----hhcCCCceEEEecccCCccc-------CCcC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLR-----KWIGHPRFELIRHDVTEPLL-------IEVD   99 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~-----~~~~~~~~~~~~~Dl~~~~~-------~~~d   99 (297)
                      |++||||||||||++|+++|+++| ++|++++|..... .+.+.     ......+++++++|++|...       .++|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCc-CEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            789999999999999999999999 9999999964321 11111     11223579999999998643       2579


Q ss_pred             EEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC----eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      +|+|+|+.........++..++++|+.++.+|+++|++.++    ||||+||..+||.....+++|+     ++..|.+.
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~-----~~~~P~~~  155 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSP  155 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-----SCCCCCSH
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCC-----CCCCCCCh
Confidence            99999998877777888999999999999999999999764    6999999999998877888888     67788899


Q ss_pred             HHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCC-eEEecCCceeEeeeeHHHHHHH
Q 022414          176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDG  253 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~  253 (297)
                      |+.+|.++|.+++.+.++++++++++||+.+|||+..... ...+...+.....++. ...++++++.++++|++|+|++
T Consensus       156 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a  235 (357)
T d1db3a_         156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM  235 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHH
Confidence            9999999999999999999999999999999999865443 2345555555555543 5566899999999999999999


Q ss_pred             HHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccCce
Q 022414          254 LIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRL  293 (297)
Q Consensus       254 ~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  293 (297)
                      ++.++++...+.||+++++.+|+.|+++.+.+.+|...++
T Consensus       236 ~~~~~~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~  275 (357)
T d1db3a_         236 QWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF  275 (357)
T ss_dssp             HHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEE
T ss_pred             HHHHHhCCCCCeEEECCCCceehHHHHHHHHHHhCCcccc
Confidence            9999998888999999999999999999999999976543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=3.7e-40  Score=282.01  Aligned_cols=257  Identities=26%  Similarity=0.408  Sum_probs=213.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC-CCccchhhhcCCCceEEEecccCCccc-------CCcCEEEEc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHL  104 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~~  104 (297)
                      |||||||||||||++|+++|+++|+..|+++++... ...+.+.......+++++.+|+++...       .++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999334555665432 233344555556789999999998732       269999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC---------C-eEEEEecceeecCCCCCCCCCC-----CCCCCCC
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---------A-RILLTSTSEVYGDPLVHPQDES-----YWGNVNP  169 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~-r~v~~Ss~~~~~~~~~~~~~e~-----~~~~~~~  169 (297)
                      |+.........++...+++|+.++.+++++|++.+         + +||++||..+||.....+..|+     .....++
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            99877666677889999999999999999998764         2 7999999999987654332222     1223356


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHH
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  249 (297)
                      ..|.+.|+.+|.++|.+++.+.++.+++++++||+.||||+...  .++++.++.++..++++.++++|++.++|+|++|
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D  238 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED  238 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc--CcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHH
Confidence            78889999999999999999999999999999999999998644  3588899999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          250 MVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       250 va~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +|+++..+++++. ++.||+++++.+++.|+++.+.+.++...
T Consensus       239 ~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~  281 (361)
T d1kewa_         239 HARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIV  281 (361)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhccccc
Confidence            9999999999877 66999999999999999999998876653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=9.6e-39  Score=271.48  Aligned_cols=256  Identities=26%  Similarity=0.354  Sum_probs=221.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhh---h---cCCCceEEEecccCCc-----ccCCc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---W---IGHPRFELIRHDVTEP-----LLIEV   98 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~---~---~~~~~~~~~~~Dl~~~-----~~~~~   98 (297)
                      .+.|+|||||||||||++|+++|+++| ++|++++|........+..   .   .....+.++.+|+.|.     ...++
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~   92 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV   92 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCc-CEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccc
Confidence            456899999999999999999999999 9999999865443322211   1   1124788999999876     34479


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHH
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYD  177 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~  177 (297)
                      +.++|+++.........++...+..|+.++.+++++|++.++ +|||+||..+||.....+.+|+     ++..|.+.|+
T Consensus        93 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~  167 (341)
T d1sb8a_          93 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-----TIGKPLSPYA  167 (341)
T ss_dssp             SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHHH
T ss_pred             cccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCC-----CCCCCCCcch
Confidence            999999987766666788889999999999999999999999 9999999999998888888888     6788899999


Q ss_pred             HhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHH
Q 022414          178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (297)
Q Consensus       178 ~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  255 (297)
                      .+|.++|++++.+.+..+++++++||+.+||++..+..  ..++..++..++.++++.+++++.+.++++|++|+|.++.
T Consensus       168 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~  247 (341)
T d1sb8a_         168 VTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANL  247 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhh
Confidence            99999999999999999999999999999999876553  3478888999999999999999999999999999999999


Q ss_pred             HHHhcCC---CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          256 RLMEGEN---TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       256 ~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      .++..+.   ++.|++++++.+|+.|+++.+.+.++.+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~  286 (341)
T d1sb8a_         248 LAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENG  286 (341)
T ss_dssp             HHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTT
T ss_pred             hhhhccccccceeeeecccccchHHHHHHHHHHHhcccc
Confidence            9987754   56899999999999999999999999764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=6.3e-38  Score=266.93  Aligned_cols=259  Identities=25%  Similarity=0.293  Sum_probs=211.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC--CCCccchhhhcCCCceEEEecccCCcc-----cCCcCEEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF--TGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYH  103 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi~  103 (297)
                      ++|||||||||||||++|++.|+++| ++|.++.++.  ..............+++++.+|+.|..     ..+++.|+|
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g-~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~   79 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNH-PDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVH   79 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCC-CCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence            47999999999999999999999999 7655554432  222222212233468999999998763     357999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCC---CC----CCCCCCCCCCCCCCCCChH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPL---VH----PQDESYWGNVNPIGVRSCY  176 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~---~~----~~~e~~~~~~~~~~~~~~Y  176 (297)
                      +|+.........++.+.++.|+.++.++++++++.+.++|++||..+||...   ..    ......+...++..|.+.|
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y  159 (346)
T d1oc2a_          80 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  159 (346)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             hhhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence            9988776666678889999999999999999999999999999999997431   11    1112223333677888999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHH
Q 022414          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       177 ~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      +.+|.++|.+++.+.+..+++++++||+.+|||+...  ...+..++.....+.++.+++++++.++++|++|+|++++.
T Consensus       160 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~--~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~  237 (346)
T d1oc2a_         160 SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI--EKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA  237 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT--TSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCc--cchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHH
Confidence            9999999999999998899999999999999997543  34677777778888888899999999999999999999999


Q ss_pred             HHhcCC-CccEEecCCCcccHHHHHHHHHHhhcccCc
Q 022414          257 LMEGEN-TGPINIGNPGEFTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       257 ~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  292 (297)
                      ++.++. ++.|++.+++..++.++++.+.+.++....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  274 (346)
T d1oc2a_         238 ILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKD  274 (346)
T ss_dssp             HHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTT
T ss_pred             HHhhcccCccccccccccccchHHHHHHHHHhCCCCc
Confidence            999888 778999999999999999999999998643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.6e-38  Score=266.42  Aligned_cols=256  Identities=27%  Similarity=0.451  Sum_probs=214.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi~~a~  106 (297)
                      |||||||||||||++|+++|+++|+++|+++++....    .......++++++++|+++.      ...++|+|||+|+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~----~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~   76 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA----ISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG----GGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc----hhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence            7999999999999999999999996699999875332    22233456899999999865      2336999999999


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCC--CCCCCCCCChHHHhHHHHH
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG--NVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~--~~~~~~~~~~Y~~sK~~~e  184 (297)
                      .........++...+..|+.++.+++++|.+.+++++++||..+|+........|....  ..+...|...|+.+|.++|
T Consensus        77 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E  156 (342)
T d2blla1          77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  156 (342)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHH
T ss_pred             cccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchh
Confidence            87776677788889999999999999999999999899999999988766555543322  2234567789999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCCC------ChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHH
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNID------DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  258 (297)
                      +++..+.+..+++++++|++.+||++....      .......++..++.++++.+++++++.++++|++|+|+++..++
T Consensus       157 ~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~  236 (342)
T d2blla1         157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII  236 (342)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHH
T ss_pred             hhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeeh
Confidence            999999999999999999999999975432      13467888899999999999999999999999999999999999


Q ss_pred             hcCC----CccEEecCCCc-ccHHHHHHHHHHhhcccCc
Q 022414          259 EGEN----TGPINIGNPGE-FTMLELAENVKEVNFYLGR  292 (297)
Q Consensus       259 ~~~~----~~~~~i~~~~~-~s~~e~~~~i~~~~g~~~~  292 (297)
                      +++.    +++||+++++. +|+.|+++.+.+.+|.+..
T Consensus       237 ~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~  275 (342)
T d2blla1         237 ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL  275 (342)
T ss_dssp             HCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT
T ss_pred             hhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCcc
Confidence            8753    45899987754 8999999999999987653

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.9e-37  Score=262.59  Aligned_cols=261  Identities=24%  Similarity=0.305  Sum_probs=213.4

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYH  103 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~  103 (297)
                      +.++|||||||||||||++|++.|+++| ++|+++++........   .  ....++..+|+.+.     ...++|.|+|
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g-~~V~~~d~~~~~~~~~---~--~~~~~~~~~D~~~~~~~~~~~~~~d~Vih   85 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHMTE---D--MFCDEFHLVDLRVMENCLKVTEGVDHVFN   85 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCSSSCG---G--GTCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEeCCCccchhh---h--cccCcEEEeechhHHHHHHHhhcCCeEee
Confidence            3468999999999999999999999999 9999998754432221   1  13456777888765     3457999999


Q ss_pred             ccCCCCCccc-ccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCC--CCCCCCCCCChHHHh
Q 022414          104 LACPASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYW--GNVNPIGVRSCYDEG  179 (297)
Q Consensus       104 ~a~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~--~~~~~~~~~~~Y~~s  179 (297)
                      +|+....... ...+...+..|+.++.+++++|++.++ |||++||..+|+.....+.++...  ....+..|.+.|+.+
T Consensus        86 ~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~s  165 (363)
T d2c5aa1          86 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLE  165 (363)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred             cccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHH
Confidence            9987654333 466778889999999999999999999 899999999998776665555432  233467788999999


Q ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC---hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHH
Q 022414          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD---GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (297)
Q Consensus       180 K~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  256 (297)
                      |.++|++++.+.++.+++++++||+.+||++.....   ...................+++|.+.++++|++|+++++..
T Consensus       166 K~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~  245 (363)
T d2c5aa1         166 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLR  245 (363)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHH
Confidence            999999999999999999999999999999764432   22344444556667778888999999999999999999999


Q ss_pred             HHhcCCCccEEecCCCcccHHHHHHHHHHhhcccCceee
Q 022414          257 LMEGENTGPINIGNPGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       257 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      +++...++.||+++++.+++.|+++.+.+.+|.+..+..
T Consensus       246 ~~~~~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~  284 (363)
T d2c5aa1         246 LTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHH  284 (363)
T ss_dssp             HHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEE
T ss_pred             HHhCCCCCeEEEecCCcccHHHHHHHHHHHhCCCCceEe
Confidence            999888999999999999999999999999998876653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.8e-37  Score=260.23  Aligned_cols=253  Identities=19%  Similarity=0.187  Sum_probs=212.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc-cchhhhcCCCceEEEecccCCccc-------CCcCEEEEc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHL  104 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~~  104 (297)
                      |+|||||||||||++|++.|+++| ++|++++|...... +.+..+....+++++++|+.+...       ...++++|+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKG-YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            689999999999999999999999 99999998754432 334444344679999999998632       257889999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (297)
                      ++.........++.+++..|+.++.+++++|++.++  +|++.||..+|+.......+|+     ++..|.+.|+.+|.+
T Consensus        80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~-----~~~~p~~~Y~~sK~~  154 (321)
T d1rpna_          80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN-----TPFYPRSPYGVAKLY  154 (321)
T ss_dssp             CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHH
T ss_pred             cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCC-----CCccccChhHHHHHH
Confidence            887776667788889999999999999999999996  6888899888888777777777     677888999999999


Q ss_pred             HHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHc-CCCeEEecCCceeEeeeeHHHHHHHHHHHHhc
Q 022414          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIR-GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (297)
Q Consensus       183 ~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  260 (297)
                      +|+.+..+.+..+++++++||+.+|||...... .+.+..++..... +.+...++++++.++++|++|+|+++..++++
T Consensus       155 ~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~  234 (321)
T d1rpna_         155 GHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQ  234 (321)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhc
Confidence            999999999999999999999999999754433 2344445555444 44555679999999999999999999999999


Q ss_pred             CCCccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          261 ENTGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       261 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +..+.||+++++..++.++++.+.+.+|.+.
T Consensus       235 ~~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~  265 (321)
T d1rpna_         235 DKADDYVVATGVTTTVRDMCQIAFEHVGLDY  265 (321)
T ss_dssp             SSCCCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred             CCcCCceecccccceehhhhHHHHHHhCCCc
Confidence            9899999999999999999999999998764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-36  Score=258.05  Aligned_cols=257  Identities=25%  Similarity=0.372  Sum_probs=205.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhh--hcCCCceEEEecccCCccc-------CCcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WIGHPRFELIRHDVTEPLL-------IEVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~  103 (297)
                      |||||||||||||++|++.|+++| ++|++++|...........  .....+++++++|+++...       .++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            889999999999999999999999 9999998865544433221  2334689999999998732       27999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (297)
                      +|+.........++.+++++|+.++.+++++|++.++ ++|++||..+|+.....+..|..    ....|...|+.+|..
T Consensus        80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~----~~~~p~~~Y~~sK~~  155 (338)
T d1udca_          80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESF----PTGTPQSPYGKSKLM  155 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTS----CCCCCSSHHHHHHHH
T ss_pred             CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcccccccccccc----ccCCCcchHHHHHhh
Confidence            9997765556678889999999999999999999998 89999999999877665555542    355678899999999


Q ss_pred             HHHHHHHHHHH-hCCcEEEEeeccccCCCCCCC--------ChhHHHHHHHHHHc-CCCeEEecC------CceeEeeee
Q 022414          183 AETLMFDYHRQ-HGIEIRIARIFNTYGPRMNID--------DGRVVSNFIAQAIR-GEPLTVQAP------GTQTRSFCY  246 (297)
Q Consensus       183 ~e~~~~~~~~~-~~~~~~ivrp~~v~G~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~i~  246 (297)
                      +|..+..+... .+++++++||+.+|||+....        ...+++.++..... ++++.++++      +.+.++++|
T Consensus       156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~  235 (338)
T d1udca_         156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred             hhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEE
Confidence            99999876655 479999999999999875322        12366666665554 345666664      678899999


Q ss_pred             HHHHHHHHHHHHhcCC----CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          247 VSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +.|+++++..+.....    .++||+++++.+|+.|+++.+.+.+|.+.++.
T Consensus       236 v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~  287 (338)
T d1udca_         236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYH  287 (338)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEE
T ss_pred             EeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceE
Confidence            9999988777665432    45899999999999999999999999876654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-36  Score=255.47  Aligned_cols=253  Identities=19%  Similarity=0.188  Sum_probs=210.5

Q ss_pred             CEE-EEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc-cchhhh------cCCCceEEEecccCCccc-------CC
Q 022414           33 MRI-LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKW------IGHPRFELIRHDVTEPLL-------IE   97 (297)
Q Consensus        33 ~~i-lItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~------~~~~~~~~~~~Dl~~~~~-------~~   97 (297)
                      ||| ||||||||||++|+++|+++| ++|++++|...... ..+..+      ....+++++++|++|...       .+
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g-~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   79 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKG-YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK   79 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCc-CEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcc
Confidence            578 999999999999999999999 99999999653221 111111      112468899999988632       36


Q ss_pred             cCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC----eEEEEecceeecCCCCCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  173 (297)
                      +++++|+++.........++..++++|+.++.+++++|++.++    +|||+||..+||.....+++|+     ++..|.
T Consensus        80 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~P~  154 (347)
T d1t2aa_          80 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPR  154 (347)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-----SCCCCC
T ss_pred             cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC-----CCCCCC
Confidence            8899999987766666778888899999999999999999875    6999999999998877788888     678888


Q ss_pred             ChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHH
Q 022414          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (297)
Q Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  251 (297)
                      +.|+.+|.++|++++.+.+..+++++++||+.+|||+.....  ..+...+......+..+..++++++.++++|++|++
T Consensus       155 ~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~  234 (347)
T d1t2aa_         155 SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYV  234 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHH
Confidence            999999999999999999889999999999999999765443  224445555666677778889999999999999999


Q ss_pred             HHHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       252 ~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      +++..++++...+.|++..+...++.++...+...++...
T Consensus       235 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (347)
T d1t2aa_         235 EAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTI  274 (347)
T ss_dssp             HHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHhhcCCCccceeccccccccchhhhhhhhhhccee
Confidence            9999999998888999999999999999999998888753

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.5e-34  Score=248.64  Aligned_cols=256  Identities=26%  Similarity=0.334  Sum_probs=195.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC------------C-CC---ccchhh--hcCCCceEEEecccCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF------------T-GS---KDNLRK--WIGHPRFELIRHDVTEP   93 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~------------~-~~---~~~~~~--~~~~~~~~~~~~Dl~~~   93 (297)
                      +|||||||||||||++|+++|++.| ++|++++...            . ..   .+.+..  .....+++++++|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g-~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKN-YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH
Confidence            6999999999999999999999999 9999986210            0 00   001111  11235789999999986


Q ss_pred             cc-------CCcCEEEEccCCCCCcccccC---hhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCCCCC
Q 022414           94 LL-------IEVDQIYHLACPASPIFYKYN---PVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        94 ~~-------~~~d~vi~~a~~~~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                      ..       .++|+|||+|+.........+   +..++..|+.++.+++++|++.++  ++++.||..+|+.... +..+
T Consensus        80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~  158 (393)
T d1i24a_          80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEE  158 (393)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCS
T ss_pred             HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-cccc
Confidence            32       258999999987664444333   446789999999999999999887  5777777777765431 1111


Q ss_pred             CCC---------CCCCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC---------------hh
Q 022414          162 SYW---------GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD---------------GR  217 (297)
Q Consensus       162 ~~~---------~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~---------------~~  217 (297)
                      ...         ....+..|.+.|+.+|.++|.++..+.++.+++++++||+.+|||+.....               ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  238 (393)
T d1i24a_         159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT  238 (393)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred             ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccccc
Confidence            111         011355677899999999999999999999999999999999999854321               23


Q ss_pred             HHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC-CccEEe--cCCCcccHHHHHHHHHHhhcc
Q 022414          218 VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINI--GNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i--~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      ++..++.....++++.+++++.+.++|+|++|++++++.+++++. .|.+++  .+++.+++.|+++.+.+..+.
T Consensus       239 ~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~  313 (393)
T d1i24a_         239 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSK  313 (393)
T ss_dssp             HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHT
T ss_pred             chhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHh
Confidence            577888888999999999999999999999999999999999876 666554  455788999999999887643

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.7e-34  Score=240.37  Aligned_cols=243  Identities=25%  Similarity=0.309  Sum_probs=196.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-------ccCCcCEEEEc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-------LLIEVDQIYHL  104 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------~~~~~d~vi~~  104 (297)
                      .|||||||||||||++|+++|+++| +.|+++++...                   .|+++.       ....+|.++|+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g-~~vi~~~~~~~-------------------~~~~~~~~~~~~~~~~~~d~v~~~   61 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLRTRDE-------------------LNLLDSRAVHDFFASERIDQVYLA   61 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCT-TEEEECCCTTT-------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCc-CEEEEecCchh-------------------ccccCHHHHHHHHhhcCCCEEEEc
Confidence            4789999999999999999999999 87776654321                   233322       12358999999


Q ss_pred             cCCCCCc-ccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHH
Q 022414          105 ACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (297)
Q Consensus       105 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (297)
                      |+..... ....++.+.++.|+.++.+++++|++.++ ||||+||.++|+.....+.+|+.....++..+.+.|+.+|.+
T Consensus        62 a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  141 (315)
T d1e6ua_          62 AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIA  141 (315)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             chhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHH
Confidence            9765432 23456777889999999999999999998 899999999999888888888766555566666789999999


Q ss_pred             HHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC--hh-----HHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHH
Q 022414          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GR-----VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (297)
Q Consensus       183 ~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  255 (297)
                      +|+.++.+.++.+++++++||+.||||+.....  ..     ...........++.+.+.+++...++++|++|+++++.
T Consensus       142 ~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~  221 (315)
T d1e6ua_         142 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI  221 (315)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHH
Confidence            999999999999999999999999999865432  11     22333455566777888899999999999999999999


Q ss_pred             HHHhcCC----------CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          256 RLMEGEN----------TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       256 ~~~~~~~----------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      .++++..          .+.++++.+...+..++++.+.+.+|.+..+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~  270 (315)
T d1e6ua_         222 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVV  270 (315)
T ss_dssp             HHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEE
T ss_pred             HhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceE
Confidence            9986642          45799999999999999999999999887654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.8e-33  Score=238.47  Aligned_cols=252  Identities=19%  Similarity=0.208  Sum_probs=200.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhh------cCCCceEEEecccCCccc-------CCc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKW------IGHPRFELIRHDVTEPLL-------IEV   98 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~------~~~~~~~~~~~Dl~~~~~-------~~~   98 (297)
                      |++||||||||||++|+++|+++| ++|++++|..... .+.+..+      .....+.++.+|+.+...       .++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKG-YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCc-CEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            789999999999999999999999 9999999964321 1111111      123467889999987632       368


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-----C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-----A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  172 (297)
                      |+|+|+|+........+++...+..|+.++.++++++++.+     . ++++.||..+++.. ....+|+     ++..|
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~-----~~~~p  154 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSET-----TPFHP  154 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTT-----SCCCC
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCC-----CCCCC
Confidence            99999999877666667888999999999999999997643     2 57777877776554 4556777     67889


Q ss_pred             CChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHH-HHHcCCCeEEecCCceeEeeeeHHHH
Q 022414          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIA-QAIRGEPLTVQAPGTQTRSFCYVSDM  250 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dv  250 (297)
                      .+.|+.+|.++|+++..+.+.++++++++||+.+|||+..... ...+...+. .........+.+++.+.++++|++|+
T Consensus       155 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~  234 (339)
T d1n7ha_         155 RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY  234 (339)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehH
Confidence            9999999999999999999999999999999999999854432 223333333 33444555667899999999999999


Q ss_pred             HHHHHHHHhcCCCccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          251 VDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       251 a~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      |+++..+++++..+.+++..+...+..++++.+.+.+|.+.
T Consensus       235 a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  275 (339)
T d1n7ha_         235 VEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNW  275 (339)
T ss_dssp             HHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred             HHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhccc
Confidence            99999999999888888888899999999999999999864

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=6.2e-33  Score=239.03  Aligned_cols=263  Identities=22%  Similarity=0.304  Sum_probs=199.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCC-----cc---chh----------hhcCCCceEEEecccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGS-----KD---NLR----------KWIGHPRFELIRHDVTE   92 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~-----~~---~~~----------~~~~~~~~~~~~~Dl~~   92 (297)
                      .|||||||||||||++|+++|+++ | ++|+++++-....     .+   ...          .......+.++++|++|
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~-~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCC-CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCC-CEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC
Confidence            589999999999999999999974 6 9999987522110     00   000          00112367899999998


Q ss_pred             cc--------cCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCC--CC
Q 022414           93 PL--------LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQ--DE  161 (297)
Q Consensus        93 ~~--------~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~--~e  161 (297)
                      ..        ..++|+|+|+|+.........++...+..|+.++.++++++++.++ +++++||..+|+.......  .+
T Consensus        81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  160 (383)
T d1gy8a_          81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA  160 (383)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccccccc
Confidence            62        2468999999998776666677888899999999999999999998 7999999988876543322  22


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-------hhHHHHHHHHH--------
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-------GRVVSNFIAQA--------  226 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-------~~~~~~~~~~~--------  226 (297)
                      +.....++..|.+.|+.+|...|++++.+.+..+++++++||+.+|||+.....       ..+++.++..+        
T Consensus       161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~  240 (383)
T d1gy8a_         161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ  240 (383)
T ss_dssp             CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred             cccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccc
Confidence            223333677889999999999999999999989999999999999999875432       12333333322        


Q ss_pred             --------HcCCCeEEec------CCceeEeeeeHHHHHHHHHHHHhcCC----------CccEEecCCCcccHHHHHHH
Q 022414          227 --------IRGEPLTVQA------PGTQTRSFCYVSDMVDGLIRLMEGEN----------TGPINIGNPGEFTMLELAEN  282 (297)
Q Consensus       227 --------~~~~~~~~~~------~~~~~~~~i~v~Dva~~~~~~~~~~~----------~~~~~i~~~~~~s~~e~~~~  282 (297)
                              ..++++.+++      +|.+.++++|++|+|++++.+++...          .++||+++++++++.|+++.
T Consensus       241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~  320 (383)
T d1gy8a_         241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEV  320 (383)
T ss_dssp             ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHH
T ss_pred             cchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHH
Confidence                    2344555554      47788999999999999999887421          45799999999999999999


Q ss_pred             HHHhhcccCceee
Q 022414          283 VKEVNFYLGRLLV  295 (297)
Q Consensus       283 i~~~~g~~~~~~~  295 (297)
                      +.+.+|.+..+..
T Consensus       321 i~~~~~~~~~~~~  333 (383)
T d1gy8a_         321 ARKTTGHPIPVRE  333 (383)
T ss_dssp             HHHHHCCCCCEEE
T ss_pred             HHHHhCCCCceEE
Confidence            9999998766543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-33  Score=237.55  Aligned_cols=258  Identities=24%  Similarity=0.353  Sum_probs=200.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC------ccchhh--hcCCCceEEEecccCCccc-------C
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS------KDNLRK--WIGHPRFELIRHDVTEPLL-------I   96 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~------~~~~~~--~~~~~~~~~~~~Dl~~~~~-------~   96 (297)
                      .+||||||||||||++|+++|+++| ++|+++++.....      .+....  .....++.++++|+.|...       .
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g-~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTT-CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCc-CEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence            3899999999999999999999999 9999997633221      111111  1234678999999998632       3


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      .+++++|+|+.........++.+.++.|+.++.+++++|++.++ +|+++||..+|+........+..    ....+.++
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~----~~~~~~~~  156 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH----PTGGCTNP  156 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTS----CCCCCSSH
T ss_pred             ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccc----cccccCCh
Confidence            57889999998776666778889999999999999999999998 89999999999876544333321    34456788


Q ss_pred             HHHhHHHHHHHHHHHHHH-hCCcEEEEeeccccCCCCCCC--------ChhHHHHHHHHHH-cCCCeEEec------CCc
Q 022414          176 YDEGKRVAETLMFDYHRQ-HGIEIRIARIFNTYGPRMNID--------DGRVVSNFIAQAI-RGEPLTVQA------PGT  239 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~-~~~~~~ivrp~~v~G~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~------~~~  239 (297)
                      |+.+|..+|+.+..+.+. .++..+++||+.+||+.....        ...++..++.... .+..+.+.+      ++.
T Consensus       157 Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~  236 (346)
T d1ek6a_         157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT  236 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCC
Confidence            999999999999988765 489999999999999864321        1235555555444 344555544      466


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      +.++++|++|+|.++..++....    .++||+++++.+++.|+++.+.+.+|.+.++.
T Consensus       237 ~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~  295 (346)
T d1ek6a_         237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK  295 (346)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEE
T ss_pred             eeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeE
Confidence            78999999999999888765533    45899999999999999999999999886654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.1e-33  Score=237.03  Aligned_cols=256  Identities=24%  Similarity=0.335  Sum_probs=199.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchh--hhcCCCceEEEecccCCccc-------CCcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDVTEPLL-------IEVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~  103 (297)
                      |.|||||||||||++|++.|+++| ++|+++++......+...  ......+++++++|+.+...       .++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENG-YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCc-CeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            679999999999999999999999 999999876544433222  12224578999999987632       37999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCC----CCCCCCCCCCCCCCCCChHHH
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVH----PQDESYWGNVNPIGVRSCYDE  178 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~----~~~e~~~~~~~~~~~~~~Y~~  178 (297)
                      +|+.........++.....+|+.++.+++++|++.++ +||++||..+||.....    +++|+     .+..|.+.|+.
T Consensus        81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~-----~~~~p~~~Y~~  155 (347)
T d1z45a2          81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEE-----CPLGPTNPYGH  155 (347)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTT-----SCCCCCSHHHH
T ss_pred             ccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccc-----cCCCCCChhHh
Confidence            9998776667778888999999999999999999998 89999999999866432    34444     67778899999


Q ss_pred             hHHHHHHHHHHHHHH--hCCcEEEEeeccccCCCCCCC--------ChhHHHHHHHHHHc-CCCeEEecC------Ccee
Q 022414          179 GKRVAETLMFDYHRQ--HGIEIRIARIFNTYGPRMNID--------DGRVVSNFIAQAIR-GEPLTVQAP------GTQT  241 (297)
Q Consensus       179 sK~~~e~~~~~~~~~--~~~~~~ivrp~~v~G~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~------~~~~  241 (297)
                      +|.++|+.++.+.+.  .+++++++||+.+||+.....        ...+++.+...... +.++.++++      +...
T Consensus       156 sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~  235 (347)
T d1z45a2         156 TKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPI  235 (347)
T ss_dssp             HHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCE
T ss_pred             HHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCcee
Confidence            999999999988764  478999999999999754221        12355555554443 344555444      3456


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC--------CccEEecCCCcccHHHHHHHHHHhhcccCcee
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN--------TGPINIGNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~--------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      ++++++.|++.+++.+++...        .+.||+++++++++.|+++.+.+.+|.+.++.
T Consensus       236 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~  296 (347)
T d1z45a2         236 RDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK  296 (347)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-
T ss_pred             eeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceE
Confidence            789999999998888776421        56899999999999999999999999876543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=1.1e-32  Score=227.48  Aligned_cols=227  Identities=22%  Similarity=0.250  Sum_probs=196.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-------cCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-------~~~~d~vi~~a  105 (297)
                      |||||||||||||++|+++|.++| ++|++++|+.                    .|+.+..       ..++|+|||+|
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g-~~Vi~~~r~~--------------------~D~~d~~~~~~~l~~~~~d~vih~a   60 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKN-VEVIPTDVQD--------------------LDITNVLAVNKFFNEKKPNVVINCA   60 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTTT--------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CEEEEeechh--------------------ccCCCHHHHHHHHHHcCCCEEEeec
Confidence            889999999999999999999999 9999999853                    2333321       13689999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      +..........+......|+.....+.+.+...+.+++++||..+|+.....+.+|.     ++..+...|+.+|...|+
T Consensus        61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~-----~~~~~~~~~~~~k~~~e~  135 (281)
T d1vl0a_          61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF-----DEVNPQSAYGKTKLEGEN  135 (281)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTT-----SCCCCCSHHHHHHHHHHH
T ss_pred             cccccccccccchhhcccccccccccccccccccccccccccceeeecccccccccc-----ccccchhhhhhhhhHHHH
Confidence            987766667778888899999999999999999999999999999988877777777     677788899999999998


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCcc
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP  265 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  265 (297)
                      .+++    .+.+++++||+++||++     .++...++.....++.+.+.+  ++.++++|++|+++++..+++++..|.
T Consensus       136 ~~~~----~~~~~~i~R~~~vyG~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~g~  204 (281)
T d1vl0a_         136 FVKA----LNPKYYIVRTAWLYGDG-----NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNYGT  204 (281)
T ss_dssp             HHHH----HCSSEEEEEECSEESSS-----SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCCEE
T ss_pred             HHHH----hCCCccccceeEEeCCC-----cccccchhhhhccCCceeecC--CceeccchhhhhhhhhhhhhhhcccCc
Confidence            8744    57899999999999997     357778888888888777654  678999999999999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHhhcccCceeec
Q 022414          266 INIGNPGEFTMLELAENVKEVNFYLGRLLVC  296 (297)
Q Consensus       266 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  296 (297)
                      ||+++++.+|+.|+++.+.+.+|.+..+.++
T Consensus       205 ~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i  235 (281)
T d1vl0a_         205 FHCTCKGICSWYDFAVEIFRLTGIDVKVTPC  235 (281)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHCCCCEEEEE
T ss_pred             eeEeCCCccchHHHHHHHHHHhCCCceEEec
Confidence            9999999999999999999999998877654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=3.1e-32  Score=230.55  Aligned_cols=261  Identities=25%  Similarity=0.349  Sum_probs=199.9

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-ccchhhhcCCCceEEEecccCCccc-------CCcCEEEEcc
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLA  105 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi~~a  105 (297)
                      ||||||||||||++|+++|+++| ++|+++++-.... .+.+.......+++++.+|+++...       .++|+|||+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g-~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQG-IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCc-CEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            79999999999999999999999 9999987643322 2233333345689999999987532       2579999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEeccee-ecCCCCCCCC-----------CCCCCCCCCCCC
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV-YGDPLVHPQD-----------ESYWGNVNPIGV  172 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~-~~~~~~~~~~-----------e~~~~~~~~~~~  172 (297)
                      +.........++...+++|+.++.+|+++|.+.++ +++++||... ++.....+..           ...+....+..|
T Consensus        81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1orra_          81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  160 (338)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence            98776556678889999999999999999999998 6666655544 4433222111           111122245667


Q ss_pred             CChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCC-hhHHHHHHHHHH-----cCCCeEEecCCceeEeeee
Q 022414          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAI-----RGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~  246 (297)
                      .+.|+.+|...|.++....+..+....++|++.+|++...... ...+..++....     .++++.+++++.+.++++|
T Consensus       161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~  240 (338)
T d1orra_         161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  240 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence            8899999999999999999889999999999999987653332 335555555444     3677889999999999999


Q ss_pred             HHHHHHHHHHHHhcCC---CccEEecC--CCcccHHHHHHHHHHhhcccCceee
Q 022414          247 VSDMVDGLIRLMEGEN---TGPINIGN--PGEFTMLELAENVKEVNFYLGRLLV  295 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~---~~~~~i~~--~~~~s~~e~~~~i~~~~g~~~~~~~  295 (297)
                      ++|++++++.+++++.   ++.|++..  +..+++.|+++.+.+..|.+.++..
T Consensus       241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~  294 (338)
T d1orra_         241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTN  294 (338)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEE
T ss_pred             ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEe
Confidence            9999999999998754   56788854  4568999999999999998876543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=2.7e-32  Score=231.51  Aligned_cols=256  Identities=18%  Similarity=0.195  Sum_probs=193.4

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh----cCCCceEEEecccCCc-----ccCCc
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW----IGHPRFELIRHDVTEP-----LLIEV   98 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~-----~~~~~   98 (297)
                      ..+.+++|||||||||||++|+++|+++| ++|+++.|+.... +.+.+.    ........+.+|+.+.     ...++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G-~~V~~~vR~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   84 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHG-YKVRGTARSASKL-ANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA   84 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHH-HHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEeCCchhH-HHHHHhhhccccccccEEEeccccchhhhhhhcccc
Confidence            44568999999999999999999999999 9999999864221 112111    1122345577888765     44579


Q ss_pred             CEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC-C-eEEEEecceeecCCC----CCCCCCCCC--------
Q 022414           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPL----VHPQDESYW--------  164 (297)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~v~~Ss~~~~~~~~----~~~~~e~~~--------  164 (297)
                      |.++|+++...   ...++...+..|+.++.+++++|++.+ + ++||+||..+++...    .....|+.|        
T Consensus        85 ~~v~~~a~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  161 (342)
T d1y1pa1          85 AGVAHIASVVS---FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKA  161 (342)
T ss_dssp             SEEEECCCCCS---CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHH
T ss_pred             hhhhhhccccc---ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccc
Confidence            99999998654   345567778899999999999999974 5 899999976543221    112223322        


Q ss_pred             ---CCCCCCCCCChHHHhHHHHHHHHHHHHHHhC--CcEEEEeeccccCCCCCCCC-hhHHHHHHHHHHcCCCeEEecCC
Q 022414          165 ---GNVNPIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       165 ---~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ivrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                         ...++..|...|+.+|..+|++++.+.+.++  +.++++||+.+|||...+.. ......++..+..++.... ..+
T Consensus       162 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~  240 (342)
T d1y1pa1         162 KTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LAL  240 (342)
T ss_dssp             HHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH-HHT
T ss_pred             ccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcc-cCC
Confidence               1224555667899999999999999988764  67888999999999765543 3466777788887775543 345


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC-CccEEecCCCcccHHHHHHHHHHhhcc
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      .+.++++|++|+|++++.+++++. .|.|++++++.+++.|+++.+.+.++.
T Consensus       241 ~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~  292 (342)
T d1y1pa1         241 MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPS  292 (342)
T ss_dssp             CCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTT
T ss_pred             ccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCC
Confidence            667899999999999999999877 888999999999999999999998743

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.97  E-value=3.5e-30  Score=219.52  Aligned_cols=257  Identities=18%  Similarity=0.203  Sum_probs=200.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-------CCcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~vi  102 (297)
                      .++|||||||||||||++|++.|+++| ++|++++|........+.......+++++.+|++|...       ..+|+|+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVF   84 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence            578999999999999999999999999 99999999876655544333334579999999998642       2589999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-e-EEEEecceeecCCC-CCCCCCCCCCCCCCCCCCChHHHh
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-R-ILLTSTSEVYGDPL-VHPQDESYWGNVNPIGVRSCYDEG  179 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r-~v~~Ss~~~~~~~~-~~~~~e~~~~~~~~~~~~~~Y~~s  179 (297)
                      |+|+.........++...+.+|+.++.++++++++.+. + +++.|+...+.... ..+.+++     ++..|...|+.+
T Consensus        85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-----~~~~p~~~y~~~  159 (356)
T d1rkxa_          85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYREN-----EAMGGYDPYSNS  159 (356)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTT-----SCBCCSSHHHHH
T ss_pred             hhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccc-----cccCCCCccccc
Confidence            99998776666778889999999999999999999876 4 55555555444332 3344454     567788899999


Q ss_pred             HHHHHHHHHHHHH---------HhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHH
Q 022414          180 KRVAETLMFDYHR---------QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (297)
Q Consensus       180 K~~~e~~~~~~~~---------~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  250 (297)
                      |...|..+..+..         ..++.++++||+.+|||+.... .+++..++.....+.. .+++.+.+.++++|+.|+
T Consensus       160 k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~D~  237 (356)
T d1rkxa_         160 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQP-VIIRNPHAIRPWQHVLEP  237 (356)
T ss_dssp             HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCC-EECSCTTCEECCEETHHH
T ss_pred             cccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh-hHHHHHHHHHHhCCCc-eEEeeccccccccccccc
Confidence            9999998877654         3468899999999999985433 4577777777766555 457889999999999999


Q ss_pred             HHHHHHHHhcCC------CccEEe--cCCCcccHHHHHHHHHHhhcccCcee
Q 022414          251 VDGLIRLMEGEN------TGPINI--GNPGEFTMLELAENVKEVNFYLGRLL  294 (297)
Q Consensus       251 a~~~~~~~~~~~------~~~~~i--~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (297)
                      |.++..++.++.      ....+.  ..+..+++.++++.+.+.+|....+.
T Consensus       238 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  289 (356)
T d1rkxa_         238 LSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ  289 (356)
T ss_dssp             HHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEE
T ss_pred             cchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEE
Confidence            999998888643      222333  33467899999999999999886554

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=9.5e-30  Score=212.14  Aligned_cols=246  Identities=22%  Similarity=0.300  Sum_probs=178.5

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEe-cccCC-----cccCCcCEEEEccCCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR-HDVTE-----PLLIEVDQIYHLACPA  108 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~Dl~~-----~~~~~~d~vi~~a~~~  108 (297)
                      |||||||||||++|+++|+++|+++|+++++-.....  .............. .|+.+     .....++.++|+|+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~   79 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch--hhcccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence            8999999999999999999999558998875432221  11111112222222 22221     2345689999999754


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHH
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~  188 (297)
                      .  ....+.......++.++.++++++++.++++++.||..+++........++     ++..|.+.|+.+|..+|.++.
T Consensus        80 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~-----~~~~~~~~Y~~~K~~~e~~~~  152 (307)
T d1eq2a_          80 S--TTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVYGYSKFLFDEYVR  152 (307)
T ss_dssp             C--TTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSG-----GGCCCSSHHHHHHHHHHHHHH
T ss_pred             c--ccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccchhhhhcc
Confidence            3  334566667788899999999999999999999999888876655555554     456777899999999999999


Q ss_pred             HHHHHhCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeE-EecCCceeEeeeeHHHHHHHHHHHHhcCCCcc
Q 022414          189 DYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLT-VQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP  265 (297)
Q Consensus       189 ~~~~~~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  265 (297)
                      .+.++.+++++++||+.+|||+.....  ......+...+..++... ..+++...++++|++|+++++..+++++..+.
T Consensus       153 ~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~~~~  232 (307)
T d1eq2a_         153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGI  232 (307)
T ss_dssp             HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCCCEE
T ss_pred             ccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhccccc
Confidence            999888999999999999999865432  235666777777766544 35778888999999999999999999988999


Q ss_pred             EEecCCCcccHHHHHHHHHHhhcc
Q 022414          266 INIGNPGEFTMLELAENVKEVNFY  289 (297)
Q Consensus       266 ~~i~~~~~~s~~e~~~~i~~~~g~  289 (297)
                      |++++++..++.|+++.+.+..+.
T Consensus       233 ~~~~~~~~~si~~i~~~i~~~~~~  256 (307)
T d1eq2a_         233 FNLGTGRAESFQAVADATLAYHKK  256 (307)
T ss_dssp             EEESCSCCBCHHHHHHHC------
T ss_pred             cccccccchhHHHHHHHHHHhcCC
Confidence            999999999999999999887653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.96  E-value=4.7e-28  Score=200.98  Aligned_cols=226  Identities=19%  Similarity=0.134  Sum_probs=175.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-------cCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-------~~~~d~vi~~a  105 (297)
                      |||||||||||||++|++.|.+.| +.|. +.+....                ..+|+++..       ..++|+|||+|
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g-~~v~-~~~~~~~----------------~~~Dl~~~~~~~~~i~~~~~D~Vih~A   62 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVG-NLIA-LDVHSKE----------------FCGDFSNPKGVAETVRKLRPDVIVNAA   62 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTS-EEEE-ECTTCSS----------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CEEE-EECCCcc----------------ccCcCCCHHHHHHHHHHcCCCEEEEec
Confidence            899999999999999999999988 6554 4443211                224665542       12689999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~  185 (297)
                      |.........++...+..|+.++.+++++|++.+++++++||..+|+.....+.+|+     .+..|.+.|+.+|..+|.
T Consensus        63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~-----~~~~p~~~y~~~k~~~e~  137 (298)
T d1n2sa_          63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQET-----DATSPLNVYGKTKLAGEK  137 (298)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTT-----SCCCCSSHHHHHHHHHHH
T ss_pred             ccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccc-----cccCCCchHhhhhhhhhh
Confidence            988776778888889999999999999999999999999999999988878888887     677888999999999999


Q ss_pred             HHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhc----C
Q 022414          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG----E  261 (297)
Q Consensus       186 ~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~----~  261 (297)
                      .+...    .....++|++..|+...    ......+...+..+..+.+.  +....+++++.|+++++..++..    +
T Consensus       138 ~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~  207 (298)
T d1n2sa_         138 ALQDN----CPKHLIFRTSWVYAGKG----NNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKP  207 (298)
T ss_dssp             HHHHH----CSSEEEEEECSEECSSS----CCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred             hHHhh----hcccccccccceeeccC----Cccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccc
Confidence            87553    34566777766664431    23444555556666655543  46678999999999999887753    2


Q ss_pred             C-CccEEecCCCcccHHHHHHHHHHhhcccC
Q 022414          262 N-TGPINIGNPGEFTMLELAENVKEVNFYLG  291 (297)
Q Consensus       262 ~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  291 (297)
                      . .++||+++++.+++.++++.+.+..+...
T Consensus       208 ~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~  238 (298)
T d1n2sa_         208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAG  238 (298)
T ss_dssp             GGCEEEECCCBSCEEHHHHHHHHHHHHHHHT
T ss_pred             cccccccccCCCceecHHHHHHHHhhhhccC
Confidence            2 78999999999999999999988776654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.5e-27  Score=189.65  Aligned_cols=209  Identities=13%  Similarity=0.034  Sum_probs=154.2

Q ss_pred             ccccccccCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccC
Q 022414           23 LRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLI   96 (297)
Q Consensus        23 ~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~   96 (297)
                      ..++++.+++|+|+|||||||||++|+++|+++|. ++|++++|+........     ...++...+|+.+.     .+.
T Consensus         5 ~~~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----~~~i~~~~~D~~~~~~~~~~~~   79 (232)
T d2bkaa1           5 KLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQ   79 (232)
T ss_dssp             HHHHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGS
T ss_pred             HHHHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----cceeeeeeeccccccccccccc
Confidence            34566777889999999999999999999999994 38999999754332211     13567777787654     456


Q ss_pred             CcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      ++|++||++|..   ....+..++..+|+.++.+++++|++.++ +|||+||..+++.                  +...
T Consensus        80 ~~d~vi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~------------------~~~~  138 (232)
T d2bkaa1          80 GHDVGFCCLGTT---RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------------SNFL  138 (232)
T ss_dssp             SCSEEEECCCCC---HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSH
T ss_pred             cccccccccccc---ccccchhhhhhhcccccceeeecccccCccccccCCccccccC------------------ccch
Confidence            899999999754   23344566778999999999999999999 7999999886532                  2256


Q ss_pred             HHHhHHHHHHHHHHHHHHhCC-cEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHH
Q 022414          176 YDEGKRVAETLMFDYHRQHGI-EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~~~~-~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  254 (297)
                      |+.+|..+|+.+.+    .++ +++|+||+.+||++..   .+....+........+     ........++++|+|+++
T Consensus       139 Y~~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~---~~~~~~~~~~~~~~~~-----~~~~~~~~I~~~dvA~a~  206 (232)
T d2bkaa1         139 YLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQE---SRPGEWLVRKFFGSLP-----DSWASGHSVPVVTVVRAM  206 (232)
T ss_dssp             HHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGG---GSHHHHHHHHHHCSCC-----TTGGGGTEEEHHHHHHHH
T ss_pred             hHHHHHHhhhcccc----ccccceEEecCceeecCCCc---CcHHHHHHHHHhhccC-----CcccCCCeEEHHHHHHHH
Confidence            99999999998754    455 4899999999998743   2344444444444321     222333579999999999


Q ss_pred             HHHHhcCC-CccEEec
Q 022414          255 IRLMEGEN-TGPINIG  269 (297)
Q Consensus       255 ~~~~~~~~-~~~~~i~  269 (297)
                      +.++.++. .+.+.+.
T Consensus       207 i~~~~~~~~~~~~i~~  222 (232)
T d2bkaa1         207 LNNVVRPRDKQMELLE  222 (232)
T ss_dssp             HHHHTSCCCSSEEEEE
T ss_pred             HHHHhcCccCCeEEEc
Confidence            99988887 5555554

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.5e-26  Score=180.29  Aligned_cols=193  Identities=13%  Similarity=0.125  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEcc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLA  105 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~a  105 (297)
                      .++||+||||||++|++++++|+++| ++|+++.|+..+..+.     ...+++++.+|+.+.     .+.++|+|||++
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g-~~V~~~~R~~~~~~~~-----~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~   75 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEEcChhhcccc-----cccccccccccccchhhHHHHhcCCCEEEEEe
Confidence            47999999999999999999999999 9999999975443221     235789999999986     356899999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHH
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e  184 (297)
                      |......    +   ...+..++.++++++++.++ |||++||..++++...            .......|...|..+|
T Consensus        76 g~~~~~~----~---~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~------------~~~~~~~~~~~~~~~e  136 (205)
T d1hdoa_          76 GTRNDLS----P---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK------------VPPRLQAVTDDHIRMH  136 (205)
T ss_dssp             CCTTCCS----C---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC------------SCGGGHHHHHHHHHHH
T ss_pred             ccCCchh----h---hhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc------------ccccccccchHHHHHH
Confidence            8643211    1   14567789999999999999 8999999888754311            1112245788888888


Q ss_pred             HHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC--
Q 022414          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--  262 (297)
Q Consensus       185 ~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--  262 (297)
                      +.++    +.+++|+++||+.+++....                 ....+..++.....+++.+|+|++++.+++++.  
T Consensus       137 ~~l~----~~~~~~tiirp~~~~~~~~~-----------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~  195 (205)
T d1hdoa_         137 KVLR----ESGLKYVAVMPPHIGDQPLT-----------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYD  195 (205)
T ss_dssp             HHHH----HTCSEEEEECCSEEECCCCC-----------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTT
T ss_pred             HHHH----hcCCceEEEecceecCCCCc-----------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCC
Confidence            8764    46899999999999864321                 123445566777789999999999999999887  


Q ss_pred             CccEEec
Q 022414          263 TGPINIG  269 (297)
Q Consensus       263 ~~~~~i~  269 (297)
                      +..++++
T Consensus       196 g~~~~~s  202 (205)
T d1hdoa_         196 GHSTYPS  202 (205)
T ss_dssp             TCEEEEE
T ss_pred             CEEEecC
Confidence            4455554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.94  E-value=4.2e-28  Score=202.51  Aligned_cols=235  Identities=13%  Similarity=0.065  Sum_probs=170.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc---hhhhcCCCceEEEecccCCc-----ccCCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LRKWIGHPRFELIRHDVTEP-----LLIEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi  102 (297)
                      +.+||||||||||||++|+++|+++| ++|++++|+.......   ....+...+++++++|+.+.     ...+.+.++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~   80 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI   80 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhh
Confidence            35789999999999999999999999 9999999976543322   11123346799999999876     345789999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR  181 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (297)
                      ++++....           ..|.....+++++|++.+. ++++.||.+++....      .     .+..+...|...|.
T Consensus        81 ~~~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~------~-----~~~~~~~~~~~~~~  138 (312)
T d1qyda_          81 SALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIM------E-----HALQPGSITFIDKR  138 (312)
T ss_dssp             ECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSC------C-----CCCSSTTHHHHHHH
T ss_pred             hhhhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCc------c-----cccchhhhhhHHHH
Confidence            98865432           3355567788889988876 888888866543221      1     23344455666666


Q ss_pred             HHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       182 ~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      ..+..    ....++++.++||+.+||+.......    ........++...+++++++.++++|++|+|++++.++.++
T Consensus       139 ~~~~~----~~~~~~~~~i~r~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~  210 (312)
T d1qyda_         139 KVRRA----IEAASIPYTYVSSNMFAGYFAGSLAQ----LDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP  210 (312)
T ss_dssp             HHHHH----HHHTTCCBCEEECCEEHHHHTTTSSC----TTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred             HHHHh----hcccccceEEeccceeecCCccchhh----HHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc
Confidence            66654    45578999999999999965322110    11111223455667789999999999999999999999887


Q ss_pred             C--Ccc-EEecCCCcccHHHHHHHHHHhhcccCceeec
Q 022414          262 N--TGP-INIGNPGEFTMLELAENVKEVNFYLGRLLVC  296 (297)
Q Consensus       262 ~--~~~-~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  296 (297)
                      .  ++. |++++++.+|++|+++.+.+.+|.+.+++.+
T Consensus       211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i  248 (312)
T d1qyda_         211 QTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYI  248 (312)
T ss_dssp             GGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCB
T ss_pred             cccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEEC
Confidence            6  455 4556667899999999999999998766543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=4.1e-27  Score=195.64  Aligned_cols=228  Identities=13%  Similarity=0.095  Sum_probs=163.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccch----hhhcCCCceEEEecccCCcc-----cCCcCEEE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRHDVTEPL-----LIEVDQIY  102 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~-----~~~~d~vi  102 (297)
                      .|||||||||||||++++++|+++| ++|++++|.........    ...+...+++++.+|+.+..     ..+.+.++
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            5899999999999999999999999 99999999765432211    11123457889999998763     35799999


Q ss_pred             EccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHH
Q 022414          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR  181 (297)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (297)
                      |+++..               +.....+++++++..++ ++++.|+.......       .     ....+...+...+.
T Consensus        82 ~~~~~~---------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~-------~-----~~~~~~~~~~~~~~  134 (307)
T d1qyca_          82 STVGSL---------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVDN-------V-----HAVEPAKSVFEVKA  134 (307)
T ss_dssp             ECCCGG---------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTTS-------C-----CCCTTHHHHHHHHH
T ss_pred             eccccc---------------ccchhhHHHHHHHHhccccceeeecccccccc-------c-----cccccccccccccc
Confidence            988532               34456678888988888 67777765432211       0     11222233444444


Q ss_pred             HHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       182 ~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                      ..+..    ....++++.++||+.+||+....     +..+......+....+++.+++.++++|++|+|++++.+++++
T Consensus       135 ~~~~~----~~~~~~~~~i~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  205 (307)
T d1qyca_         135 KVRRA----IEAEGIPYTYVSSNCFAGYFLRS-----LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP  205 (307)
T ss_dssp             HHHHH----HHHHTCCBEEEECCEEHHHHTTT-----TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred             cccch----hhccCCCceecccceecCCCccc-----hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh
Confidence            44444    45568999999999999976322     1122223345556777788999999999999999999999887


Q ss_pred             C--Ccc-EEecCCCcccHHHHHHHHHHhhcccCceeec
Q 022414          262 N--TGP-INIGNPGEFTMLELAENVKEVNFYLGRLLVC  296 (297)
Q Consensus       262 ~--~~~-~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  296 (297)
                      .  ++. |++++++.+|+.|+++.+.+++|.+.+++.+
T Consensus       206 ~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~  243 (307)
T d1qyca_         206 RTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYV  243 (307)
T ss_dssp             GGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEE
T ss_pred             hhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEEC
Confidence            6  454 4556778899999999999999998766543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=1.4e-25  Score=177.06  Aligned_cols=195  Identities=19%  Similarity=0.207  Sum_probs=137.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCCCCccchhhhcCCCceEEEecccC---CcccCCcCEEEEccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT---EPLLIEVDQIYHLACP  107 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~d~vi~~a~~  107 (297)
                      .|||||||||||||++|+++|+++|++ +|+++.|+.....         ..+.....|+.   +.....+|+||||+|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~   72 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------PRLDNPVGPLAELLPQLDGSIDTAFCCLGT   72 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------TTEECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------ccccccccchhhhhhccccchheeeeeeee
Confidence            389999999999999999999999932 6777776543221         23333333332   2334468999999875


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHH
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (297)
                      ..  ........+...|+.++.+++++|++.++ +|+++||..+++.                  +.+.|..+|..+|+.
T Consensus        73 ~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~------------------~~~~y~~~K~~~E~~  132 (212)
T d2a35a1          73 TI--KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------------SSIFYNRVKGELEQA  132 (212)
T ss_dssp             CH--HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHHHHHH
T ss_pred             ec--cccccccccccchhhhhhhcccccccccccccccccccccccc------------------cccchhHHHHHHhhh
Confidence            42  33455667889999999999999999998 8999999887532                  235699999999988


Q ss_pred             HHHHHHHhCC-cEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCCCcc
Q 022414          187 MFDYHRQHGI-EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP  265 (297)
Q Consensus       187 ~~~~~~~~~~-~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  265 (297)
                      +.+    .++ +++|+||+.+||+.....   +..     ........+ ..  ..+.++|++|+|++++.+++++..|.
T Consensus       133 l~~----~~~~~~~I~Rp~~v~G~~~~~~---~~~-----~~~~~~~~~-~~--~~~~~i~v~DvA~ai~~~~~~~~~g~  197 (212)
T d2a35a1         133 LQE----QGWPQLTIARPSLLFGPREEFR---LAE-----ILAAPIARI-LP--GKYHGIEACDLARALWRLALEEGKGV  197 (212)
T ss_dssp             HTT----SCCSEEEEEECCSEESTTSCEE---GGG-----GTTCCCC-------CHHHHHHHHHHHHHHHHHHTCCCSEE
T ss_pred             ccc----cccccceeeCCcceeCCccccc---HHH-----HHHHHHhhc-cC--CCCcEEEHHHHHHHHHHHHcCCCCCC
Confidence            753    355 599999999999875321   110     111111111 11  12356999999999999999988887


Q ss_pred             EEecC
Q 022414          266 INIGN  270 (297)
Q Consensus       266 ~~i~~  270 (297)
                      +++.+
T Consensus       198 ~~~~~  202 (212)
T d2a35a1         198 RFVES  202 (212)
T ss_dssp             EEEEH
T ss_pred             EEEEH
Confidence            76643

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.90  E-value=3e-23  Score=175.88  Aligned_cols=229  Identities=10%  Similarity=0.007  Sum_probs=160.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi~~  104 (297)
                      +.|+|+|||||||||++|++.|+++| ++|+++.|+..+..  .......++++++++|+.+.      ...++|.++++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~--~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~   78 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVHSLKGLI--AEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFIN   78 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCSCSHH--HHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCC-CeEEEEECCcchhh--hhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEee
Confidence            46899999999999999999999999 99999999754322  12223346899999999875      23478888876


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHH
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (297)
                      .....            ..++....+++++|++.|+ +++++||.......              ...+...|..+|...
T Consensus        79 ~~~~~------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~--------------~~~~~~~~~~~k~~~  132 (350)
T d1xgka_          79 TTSQA------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY--------------GPWPAVPMWAPKFTV  132 (350)
T ss_dssp             CCSTT------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGT--------------SSCCCCTTTHHHHHH
T ss_pred             ccccc------------chhhhhhhHHHHHHHHhCCCceEEEeeccccccC--------------CcccchhhhhhHHHH
Confidence            53221            2356678899999999998 88888887643321              122234467788877


Q ss_pred             HHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCC-CeEEecCCceeEeeeeH-HHHHHHHHHHHhcC
Q 022414          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYV-SDMVDGLIRLMEGE  261 (297)
Q Consensus       184 e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v-~Dva~~~~~~~~~~  261 (297)
                      +..+.    ...+++.++||+..++.........+..   .....+. ......+++..+.++++ +|+++++..++..+
T Consensus       133 ~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~  205 (350)
T d1xgka_         133 ENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQM---ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  205 (350)
T ss_dssp             HHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCBE---EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHH----hhccCceeeeeceeeccccccccccccc---cccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC
Confidence            77653    4578999999999887543221110000   0011111 23344567778888886 79999999999765


Q ss_pred             C----CccEEecCCCcccHHHHHHHHHHhhcccCceeec
Q 022414          262 N----TGPINIGNPGEFTMLELAENVKEVNFYLGRLLVC  296 (297)
Q Consensus       262 ~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  296 (297)
                      .    +..|++++ +.+|+.|+++.+.+++|.+.+++.+
T Consensus       206 ~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~~~v  243 (350)
T d1xgka_         206 PQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQV  243 (350)
T ss_dssp             HHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEEC
T ss_pred             hhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceEEEC
Confidence            3    44667765 6899999999999999998766543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=8.2e-23  Score=164.23  Aligned_cols=223  Identities=16%  Similarity=0.099  Sum_probs=148.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~  104 (297)
                      .+++|||||||||||+++++.|+++|+ ..|+.+.|+...    ....  ..+++++.+|+++.     ...++|.|||+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~----~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   75 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG----KEKI--GGEADVFIGDITDADSINPAFQGIDALVIL   75 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHH----HHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHH----HHhc--cCCcEEEEeeeccccccccccccceeeEEE
Confidence            368999999999999999999999992 245666664321    1111  24678899999876     34579999999


Q ss_pred             cCCCCCcc-------------cccChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          105 ACPASPIF-------------YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       105 a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      ++......             ..........+|+.++.+++..+...+. .+.+.|+...+.....           ...
T Consensus        76 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-----------~~~  144 (252)
T d2q46a1          76 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP-----------LNK  144 (252)
T ss_dssp             CCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG-----------GGG
T ss_pred             EeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc-----------ccc
Confidence            98654221             1223445667889999999999998888 6777777654321100           011


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  250 (297)
                      .....|...+.+.+.    +....+++++++||+.+||+.......          ..+....   -.....+++|++|+
T Consensus       145 ~~~~~~~~~~~~~~~----~~~~~~~~~~ilRp~~v~g~~~~~~~~----------~~~~~~~---~~~~~~~~i~~~Dv  207 (252)
T d2q46a1         145 LGNGNILVWKRKAEQ----YLADSGTPYTIIRAGGLLDKEGGVREL----------LVGKDDE---LLQTDTKTVPRADV  207 (252)
T ss_dssp             GGGCCHHHHHHHHHH----HHHHSSSCEEEEEECEEECSCTTSSCE----------EEESTTG---GGGSSCCEEEHHHH
T ss_pred             ccccchhhhhhhhhh----hhhcccccceeecceEEECCCcchhhh----------hhccCcc---cccCCCCeEEHHHH
Confidence            112335544444443    445678999999999999997432110          0000000   01333568999999


Q ss_pred             HHHHHHHHhcCC--CccEEecCCC---cccHHHHHHHHHHhh
Q 022414          251 VDGLIRLMEGEN--TGPINIGNPG---EFTMLELAENVKEVN  287 (297)
Q Consensus       251 a~~~~~~~~~~~--~~~~~i~~~~---~~s~~e~~~~i~~~~  287 (297)
                      |++++.+++++.  ++.||++++.   ..++.++.+.+.++.
T Consensus       208 a~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~  249 (252)
T d2q46a1         208 AEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT  249 (252)
T ss_dssp             HHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred             HHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence            999999999876  5689998653   356777776665543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=6.9e-21  Score=152.16  Aligned_cols=211  Identities=16%  Similarity=0.095  Sum_probs=152.3

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------c
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~   95 (297)
                      |..++|+++||||++.||+++++.|+++| ++|++.+|+.    +.+.+.....+...+.+|+++..            .
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G-~~V~~~~r~~----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEG-ARLVACDIEE----GPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCH----HHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCH----HHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            34578999999999999999999999999 9999999953    33333333446788999999862            2


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||......    ..+++...+++|+.++..+.+++.+    .+. .++++||....               
T Consensus        76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~---------------  140 (242)
T d1ulsa_          76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL---------------  140 (242)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG---------------
T ss_pred             CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc---------------
Confidence            36999999999766533    2344677889999999988887744    333 56666665432               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+   .+++++.+.||.+-.+......    ...........++         ..
T Consensus       141 --~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~----~~~~~~~~~~~pl---------~R  205 (242)
T d1ulsa_         141 --GNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP----EKVREKAIAATPL---------GR  205 (242)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC----HHHHHHHHHTCTT---------CS
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC----HHHHHHHHhcCCC---------CC
Confidence              2223467999999999999988876   4799999999999876543222    2233333433332         13


Q ss_pred             eeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      +..++|+|+++++++....    +..+.+.+|..
T Consensus       206 ~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         206 AGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            5678999999999997543    44677777644

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=4.8e-21  Score=152.50  Aligned_cols=204  Identities=16%  Similarity=0.120  Sum_probs=146.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------c
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~   95 (297)
                      +..++|+++||||++.||+++++.|+++| ++|++++|+....          .++..+++|+++..            .
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~G-a~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADG-HKVAVTHRGSGAP----------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSSCCC----------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCcchh----------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            34578999999999999999999999999 9999999964332          24567889999862            2


Q ss_pred             CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||......    ..++++..+++|+.++..+.+++    ++.+. ++|++||.....              
T Consensus        72 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~--------------  137 (237)
T d1uzma1          72 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW--------------  137 (237)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------
T ss_pred             CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc--------------
Confidence            36999999999765433    23456778899999988777655    44555 899999987642              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+...    .+.+.......+..++         ..
T Consensus       138 --~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~----~~~~~~~~~~~~~~pl---------~R  202 (237)
T d1uzma1         138 --GIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR----ALDERIQQGALQFIPA---------KR  202 (237)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----HSCHHHHHHHGGGCTT---------CS
T ss_pred             --CCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh----ccCHHHHHHHHhcCCC---------CC
Confidence              2233467999999999999988876   4799999999988654311    1112222223332222         23


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +..++|+|+++++++....   .| .+.+.+|
T Consensus       203 ~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         203 VGTPAEVAGVVSFLASEDASYISGAVIPVDGG  234 (237)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            6789999999999997543   44 6777665

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.86  E-value=1.1e-20  Score=151.41  Aligned_cols=213  Identities=16%  Similarity=0.120  Sum_probs=146.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++|.++||||++.||+++++.|+++| ++|++.+|+.....+...+.. ..++..+++|+++..            +.+
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~G-a~V~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEG-ADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCchHHHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999999999 999999986532222221222 246889999999862            236


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++|||||......    ..+++...+++|+.++..+++++    ++.+- ++|++||....                .
T Consensus        81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~----------------~  144 (247)
T d2ew8a1          81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW----------------L  144 (247)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG----------------S
T ss_pred             CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhc----------------c
Confidence            999999999866443    23557778899999998888776    44554 89999998764                2


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+.....   ......... ...       ......+.
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~-~~~-------~~~l~r~~  213 (247)
T d2ew8a1         145 KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS---ALSAMFDVL-PNM-------LQAIPRLQ  213 (247)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CT-------TSSSCSCC
T ss_pred             cCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc---ccchhHHHH-HHH-------hccCCCCC
Confidence            3333467999999999999988876   479999999998876542111   111111111 110       01112466


Q ss_pred             eHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          246 YVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      .++|+|+++++++....   .| .+.+.+|
T Consensus       214 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         214 VPLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            78999999999997543   44 5677665

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=3.3e-21  Score=154.09  Aligned_cols=211  Identities=16%  Similarity=0.129  Sum_probs=152.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++|+++||||++.||+++++.|+++| ++|++.+|+....++ +.+.+. .+...+.+|+++..            ..+
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G-~~Vv~~~r~~~~l~~-~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARG-AKVIGTATSENGAQA-ISDYLG-ANGKGLMLNVTDPASIESVLEKIRAEFGE   78 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHH-HHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHH-HHHHhC-CCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence            468999999999999999999999999 999999996433222 222222 36788899999862            236


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||.......    .+++...+++|+.++..+++++    ++++- ++|++||.....                
T Consensus        79 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~----------------  142 (243)
T d1q7ba_          79 VDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM----------------  142 (243)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------
T ss_pred             cceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC----------------
Confidence            9999999997665442    3446678899999998888877    44454 899999987642                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|..+|.+.+.+.+.++.+   ++++++.+.||.+-.+....    +.......+....++         ..+.
T Consensus       143 ~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~----~~~~~~~~~~~~~pl---------~R~~  209 (243)
T d1q7ba_         143 GNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA----LSDDQRAGILAQVPA---------GRLG  209 (243)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT----SCHHHHHHHHTTCTT---------SSCB
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh----hhhhHHHHHHhcCCC---------CCCC
Confidence            2233467999999999999988876   47999999999886543211    122223333333322         1367


Q ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCC
Q 022414          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~----~~~~~i~~~~  272 (297)
                      .++|+|+++++++....    +..+.+.+|-
T Consensus       210 ~pedvA~~v~fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         210 GAQEIANAVAFLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence            89999999999997543    4467777763

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=4.3e-21  Score=154.59  Aligned_cols=217  Identities=15%  Similarity=0.158  Sum_probs=155.2

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc-----------
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~-----------   94 (297)
                      +|..++|+++||||++.||+++++.|+++| ++|++.+|+.....+...++.. ..++..+++|+++..           
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~G-a~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAG-ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999 9999999965433222222211 246888999999862           


Q ss_pred             -cCCcCEEEEccCCCCCccc---ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIFY---KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                       +.++|++|||||.......   .+++...+++|+.++..+.+++    ++.+- ++|++||....              
T Consensus        85 ~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~--------------  150 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE--------------  150 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT--------------
T ss_pred             HcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchh--------------
Confidence             2369999999997654332   3446678899999988887766    33444 78999987754              


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        .+......|+.+|.+.+.+.+.++.+   +++++..+.||.+..+.....   +-+.....+.+..++         .
T Consensus       151 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~---~~~e~~~~~~~~~pl---------~  216 (255)
T d1fmca_         151 --NKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV---ITPEIEQKMLQHTPI---------R  216 (255)
T ss_dssp             --CCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CCHHHHHHHHHTCSS---------C
T ss_pred             --ccccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc---CCHHHHHHHHhcCCC---------C
Confidence              23334467999999999999988876   479999999998866532111   112333344443332         1


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      .+..++|+|+++++++....   .| .+.+.+|.
T Consensus       217 R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            36688999999999997543   44 67777764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.85  E-value=8.4e-21  Score=153.07  Aligned_cols=215  Identities=18%  Similarity=0.142  Sum_probs=153.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..++|+++||||++.||+++++.|+++| ++|++.+|+.....+...++  ..++..+.+|+++..            ..
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~~--~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREG-ARVAIADINLEAARATAAEI--GPAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTT-EEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh--CCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            3568999999999999999999999999 99999999643333222222  246888999999862            23


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcC-C-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-A-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||+||......    ..+++...+++|+.++..+.+++.    +.+ . ++|++||...+               
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~---------------  143 (256)
T d1k2wa_          79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR---------------  143 (256)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT---------------
T ss_pred             CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc---------------
Confidence            6999999999765433    234466788999999888887642    222 3 89999998754               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHH-----------HHHHHcCCCe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNF-----------IAQAIRGEPL  232 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~-----------~~~~~~~~~~  232 (297)
                       .+......|..+|.+.+.+.+.++.+   .+++++.+.||.+-.+..    ......+           ...+....++
T Consensus       144 -~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  218 (256)
T d1k2wa_         144 -RGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW----DGVDAKFADYENLPRGEKKRQVGAAVPF  218 (256)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTH----HHHHHHHHHHHTCCTTHHHHHHHHHSTT
T ss_pred             -cccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhh----hhhhhhhhhhccCChHHHHHHHHhcCCC
Confidence             23333467999999999999988876   479999999998877642    1111111           1111111111


Q ss_pred             EEecCCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCccc
Q 022414          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (297)
Q Consensus       233 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s  275 (297)
                               ..+..++|+|+++++++....    +..+.+.+|..+|
T Consensus       219 ---------gR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         219 ---------GRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             ---------SSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             ---------CCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence                     236788999999999986543    4468888876553

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.85  E-value=1.2e-20  Score=151.73  Aligned_cols=213  Identities=13%  Similarity=0.044  Sum_probs=152.8

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~   95 (297)
                      ...+|.++||||++.||+++++.|.++| ++|++.+|+.....+...++.. ..++..+++|+++..            .
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~G-a~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSV-SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTS-SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4568999999999999999999999999 9999999965433222222211 236888999999862            2


Q ss_pred             CCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++||+||.......    .+++...+++|+.++..+.+++    ++.+- ++|++||.....              
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~--------------  151 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT--------------  151 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--------------
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC--------------
Confidence            379999999997654432    3456778899999988888766    44554 899999987642              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                        +......|+.+|.+.+.+.+.++.+   .++++..+.||.+-.+....    ..+.....+....++         ..
T Consensus       152 --~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~----~~~~~~~~~~~~~pl---------~R  216 (251)
T d2c07a1         152 --GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK----ISEQIKKNIISNIPA---------GR  216 (251)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------CCHHHHHHHHTTCTT---------SS
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc----cCHHHHHHHHhcCCC---------CC
Confidence              2233467999999999999998876   47999999999998765322    123344444444332         13


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +...+|+|+++++++....   .| .+.+.+|
T Consensus       217 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         217 MGTPEEVANLACFLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            6788999999999997544   44 5667665

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.1e-20  Score=149.55  Aligned_cols=213  Identities=18%  Similarity=0.148  Sum_probs=151.8

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc--------ccCCcC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP--------LLIEVD   99 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--------~~~~~d   99 (297)
                      +...+|+++||||++.||+++++.|+++| ++|++++|+.....+. .+.  ..++..+.+|+++.        ...++|
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G-~~V~~~~r~~~~l~~~-~~~--~~~~~~~~~Dv~d~~~v~~~~~~~g~iD   78 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATG-ARVVAVSRTQADLDSL-VRE--CPGIEPVCVDLGDWEATERALGSVGPVD   78 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHH-HHH--STTCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCHHHHHHH-HHh--cCCCeEEEEeCCCHHHHHHHHHHhCCce
Confidence            45679999999999999999999999999 9999999964322221 111  24678889999986        334799


Q ss_pred             EEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH-----cCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR-----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      ++||+||......    ..+++...+++|+.++..+.+++.+     .+. ++|++||.....                +
T Consensus        79 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~----------------~  142 (244)
T d1pr9a_          79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----------------A  142 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------C
T ss_pred             EEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc----------------c
Confidence            9999999766543    2345667889999998888776533     233 899999987642                3


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+........  ......+....++         ..+..
T Consensus       143 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~--~~~~~~~~~~~pl---------~R~~~  211 (244)
T d1pr9a_         143 VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD--PHKAKTMLNRIPL---------GKFAE  211 (244)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS--HHHHHHHHTTCTT---------CSCBC
T ss_pred             ccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC--hHHHHHHHhcCCC---------CCCcC
Confidence            333467999999999999998876   479999999998876532111000  1222333333322         23678


Q ss_pred             HHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          247 VSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ++|+|+++++++....   +| .+.+.+|
T Consensus       212 peevA~~v~fL~S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         212 VEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence            9999999999997543   44 5666665

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.85  E-value=1.9e-20  Score=149.45  Aligned_cols=206  Identities=16%  Similarity=0.094  Sum_probs=149.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++|+++||||++.||+++++.|+++| ++|++.+|+.....+...+ + ..+...+++|+++..            ..+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEG-AKVVFGDILDEEGKAMAAE-L-ADAARYVHLDVTQPAQWKAAVDTAVTAFGG   80 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-T-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHH-h-hCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            458999999999999999999999999 9999999965332222222 2 246788999999862            236


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++|||||.......    .+++...+++|+.++..+.+++    ++.+. ++|++||...+                .
T Consensus        81 idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~----------------~  144 (244)
T d1nffa_          81 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL----------------A  144 (244)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------------S
T ss_pred             CeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccc----------------c
Confidence            9999999997665432    3446678899999998888766    33444 89999998764                2


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeee
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (297)
                      +......|+.+|...+.+.+.++.+   .++++..+.||.+..+.......         .....         ....+.
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~---------~~~~~---------pl~R~~  206 (244)
T d1nffa_         145 GTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE---------DIFQT---------ALGRAA  206 (244)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT---------TCSCC---------SSSSCB
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH---------HHHhc---------cccCCC
Confidence            3334467999999999999998876   47999999999887654211100         00011         112477


Q ss_pred             eHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          246 YVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       246 ~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      .++|+|+++++++....   .| .+.+.+|-
T Consensus       207 ~p~diA~~v~fL~s~~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         207 EPVEVSNLVVYLASDESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence            89999999999996543   44 67777663

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=2.6e-20  Score=148.78  Aligned_cols=212  Identities=19%  Similarity=0.135  Sum_probs=150.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------cCCcCE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------LIEVDQ  100 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------~~~~d~  100 (297)
                      +..+|+++||||++.||+++++.|+++| ++|++++|+.....+. .+.  ..++..+.+|+++..        +.++|+
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~-~~~--~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   77 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASG-AKVVAVTRTNSDLVSL-AKE--CPGIEPVCVDLGDWDATEKALGGIGPVDL   77 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHH-HHH--STTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHH-HHh--cCCCeEEEEeCCCHHHHHHHHHHcCCCeE
Confidence            4578999999999999999999999999 9999999964322221 111  246888999999863        346999


Q ss_pred             EEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----c-CC-eEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V-GA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      +|||||......    ..++++..+++|+.++..+.+++.+    . +- ++|++||.....                +.
T Consensus        78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----------------~~  141 (242)
T d1cyda_          78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV----------------TF  141 (242)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CC
T ss_pred             EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc----------------cC
Confidence            999999765433    2344667889999999888876632    2 33 799999976532                23


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      .....|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+......  .-+.....+....++         ..+..+
T Consensus       142 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~--~~~~~~~~~~~~~pl---------~R~~~p  210 (242)
T d1cyda_         142 PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS--ADPEFARKLKERHPL---------RKFAEV  210 (242)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT--CCHHHHHHHHHHSTT---------SSCBCH
T ss_pred             CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc--CCHHHHHHHHhcCCC---------CCCcCH
Confidence            33467999999999999998876   4799999999988654310000  001233333332222         136788


Q ss_pred             HHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          248 SDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +|+|+++++++....   .| .+.+.+|
T Consensus       211 eeva~~v~fL~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         211 EDVVNSILFLLSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             HHHHHHHHHHhCchhcCcCCceEEeCcc
Confidence            999999999997543   44 6777765

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=5.5e-21  Score=153.22  Aligned_cols=215  Identities=15%  Similarity=0.098  Sum_probs=149.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+|+++||||++.||+++++.|+++| ++|++.+|+...  .+..+   ..+..++++|+++..            ..+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G-~~V~~~~~~~~~--~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   76 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREG-ALVALCDLRPEG--KEVAE---AIGGAFFQVDLEDERERVRFVEEAAYALGR   76 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSTTH--HHHHH---HHTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHH--HHHHH---HcCCeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999999999 999999996432  11222   124567899999862            236


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++|||||...+...    .++++..+++|+.++..+.+++.    +.+- ++|++||...+                .
T Consensus        77 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~----------------~  140 (248)
T d2d1ya1          77 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL----------------F  140 (248)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT----------------S
T ss_pred             CCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccc----------------c
Confidence            9999999997665432    34466788999999998888874    3444 89999998764                2


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC--ChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      +......|..+|...+.+.+.++.+   ++++++.+.||.+-.+.....  .........+.+....++         ..
T Consensus       141 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R  211 (248)
T d2d1ya1         141 AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL---------RR  211 (248)
T ss_dssp             BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT---------SS
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC---------CC
Confidence            3334467999999999999988876   479999999988865421000  000000111112222111         24


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCccc
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNPGEFT  275 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~~s  275 (297)
                      +..++|+|+++++++....   .| .+.+.+|-..+
T Consensus       212 ~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         212 LGKPEEVAEAVLFLASEKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence            6789999999999997543   44 68887765433

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.85  E-value=2.7e-20  Score=149.44  Aligned_cols=212  Identities=16%  Similarity=0.131  Sum_probs=148.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++|+++||||++.||+++++.|+++| .+|++.+|+.....+...++  ..++.++++|+++..            ..+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~G-a~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAG-ARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh--CCceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999 99999999653322222222  136889999999862            236


Q ss_pred             cCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++|||||.......    .+++...+++|+.++..+++++    ++.+. ++|++||...+.                
T Consensus        80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~----------------  143 (254)
T d1hdca_          80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----------------  143 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred             ccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc----------------
Confidence            9999999997665432    3446678899999998888877    34454 899999987642                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee-
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF-  244 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  244 (297)
                      +......|..+|.+.+.+.+.++.+   .++++..+.||.+..+.        ...    ............ .....+ 
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~--------~~~----~~~~~~~~~~~~-~pl~R~g  210 (254)
T d1hdca_         144 GLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM--------TAE----TGIRQGEGNYPN-TPMGRVG  210 (254)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH--------HHH----HTCCCSTTSCTT-STTSSCB
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc--------chh----cCHHHHHHHHhC-CCCCCCC
Confidence            2333467999999999999998876   47999999999886432        111    111100000000 001122 


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      +.++|+|+++++++....    +..+.+.+|-.
T Consensus       211 ~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         211 NEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             -CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCHHHHHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence            357999999999997543    44678877643

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.84  E-value=6.6e-20  Score=148.91  Aligned_cols=220  Identities=16%  Similarity=0.119  Sum_probs=152.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++|+++||||++.||+++++.|+++| .+|++++|+....++...++.....+.++.+|+++..            +.+
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYG-AKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999 9999999965433333333333346788999999862            236


Q ss_pred             cCEEEEccCCCCCcc------cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      +|++||+||......      ..++++..+++|+.++..+.+++.+    .+. ++|++||...+.              
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~--------------  148 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT--------------  148 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC--------------
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc--------------
Confidence            999999999654321      2234667889999999888877733    444 889998876542              


Q ss_pred             CCCCCCC-ChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          167 VNPIGVR-SCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       167 ~~~~~~~-~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                        ...+. ..|..+|.+.+.+.+.++.+   .+++++.+.||.+-.+........-....-........+        ..
T Consensus       149 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--------~g  218 (268)
T d2bgka1         149 --AGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL--------KG  218 (268)
T ss_dssp             --CCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS--------CS
T ss_pred             --cccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcccc--------CC
Confidence              11222 36999999999999988876   479999999999987754221110011111111111110        01


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                      .+..++|+|+++++++....    +..+.+.+|-..
T Consensus       219 r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         219 TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHHHHHHHhChhhCCccCceEEECcCccc
Confidence            36689999999999997543    446788877544

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=4.3e-20  Score=148.28  Aligned_cols=214  Identities=18%  Similarity=0.102  Sum_probs=152.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------   94 (297)
                      +.++|+++||||++.||+++++.|+++| ++|++.+|+.....+...++..  ..++..+++|+++..            
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~G-a~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAG-CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999 9999999975443332222211  246788999999862            


Q ss_pred             cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ..++|++|||||......    ..+++...+++|+.++..+.+++.+    .+. ++|++||.....             
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~-------------  147 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE-------------  147 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc-------------
Confidence            236999999999765433    3345667889999999888887643    344 899998865421             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH--HHHHHHHHcCCCeEEecCCce
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  240 (297)
                        .+......|..+|.+.+.+.+.++.+   .++++..+.||.+-.+..    ....  +.....+....++.       
T Consensus       148 --~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~----~~~~~~~~~~~~~~~~~pl~-------  214 (251)
T d1vl8a_         148 --VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT----EAVFSDPEKLDYMLKRIPLG-------  214 (251)
T ss_dssp             --CCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT----HHHHTCHHHHHHHHHTCTTS-------
T ss_pred             --ccCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHH----HhccCCHHHHHHHHhcCCCC-------
Confidence              12222357999999999999988876   479999999999977652    1111  23334444443331       


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                        .+..++|+|+++++++....   .| .+.+.+|
T Consensus       215 --R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG  247 (251)
T d1vl8a_         215 --RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  247 (251)
T ss_dssp             --SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcC
Confidence              35678999999999997543   44 6777665

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.84  E-value=2.9e-20  Score=150.08  Aligned_cols=217  Identities=13%  Similarity=0.044  Sum_probs=153.8

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------   94 (297)
                      +.++|+++||||++.||+++++.|.++| ++|++.+|+.....+...+.+.  ..++..+++|+++..            
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEK-AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999 9999999965332222222221  236788999999862            


Q ss_pred             cCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC--eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA--RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      ..++|++|||||...+...    .+++...+++|+.++..+.+++    ++.+.  .++++||....             
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~-------------  149 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK-------------  149 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT-------------
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc-------------
Confidence            2369999999998765432    3446678899999988887766    34443  58889987653             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH-HHHHHHHHcCCCeEEecCCce
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV-SNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  240 (297)
                         .+......|..+|.+.+.+.+.++.+   .+++++.+.||.+..+...   ..+. +.....+....++        
T Consensus       150 ---~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~---~~~~~~~~~~~~~~~~pl--------  215 (261)
T d1geea_         150 ---IPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA---EKFADPEQRADVESMIPM--------  215 (261)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH---HHHHSHHHHHHHHTTCTT--------
T ss_pred             ---ccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh---hhcCCHHHHHHHHhcCCC--------
Confidence               12333467999999999999988876   4799999999998765421   1111 2222333333322        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                       ..+..++|+|+++++++....    +..+.+.+|..+
T Consensus       216 -~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         216 -GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence             136688999999999997543    447788877544

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.84  E-value=5.4e-21  Score=154.73  Aligned_cols=221  Identities=12%  Similarity=0.066  Sum_probs=147.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~------------   94 (297)
                      .++|+++||||++.||+++++.|+++| ++|++.+|+.....+.....+   ...++.++.+|+++..            
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~G-a~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQG-ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999 999999996433222222211   1246888999999862            


Q ss_pred             cCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~  165 (297)
                      ..++|++|||||.......    .+++...+++|+.++..+++++    ++.+- ++|++||.....             
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-------------  147 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV-------------  147 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee-------------
Confidence            2369999999997665432    3446678899999988877766    44555 899999987642             


Q ss_pred             CCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCC---eEEecCCc
Q 022414          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP---LTVQAPGT  239 (297)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  239 (297)
                         +......|..+|...+.+.+.++.+   .+++++.+.||.+-.+....    .+............   ........
T Consensus       148 ---~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T d1x1ta1         148 ---ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK----QISALAEKNGVDQETAARELLSEKQ  220 (260)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------CHHHHC
T ss_pred             ---ccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhh----hhhhhhhhcCCChHHHHHHHHHhcC
Confidence               2333467999999999999998876   47999999999887654211    11111000000000   00000000


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      ....+..++|+|+++++++....   .| .+.+.+|
T Consensus       221 Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         221 PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence            11246789999999999997543   44 6677665

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.84  E-value=3e-20  Score=150.00  Aligned_cols=218  Identities=15%  Similarity=0.078  Sum_probs=154.1

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      ++..+|+++||||++.||+++++.|+++| ++|++.+|+.....+...++.. ...+..+++|+++..            
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLG-ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999 9999999965443333333222 246778899999852            


Q ss_pred             cC-CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 LI-EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 ~~-~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      +. .+|++||+||......    ..+++...+++|+.++..+.+++    ++.+. ++|++||....             
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-------------  149 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA-------------  149 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT-------------
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccc-------------
Confidence            22 4899999999765433    23446678899999998888776    33444 89999997753             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC-ChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                         .+......|..+|...+.+.+.++.+   .+++++.+.||.+-.+..... ........+..+....++        
T Consensus       150 ---~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl--------  218 (259)
T d2ae2a_         150 ---LAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL--------  218 (259)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT--------
T ss_pred             ---cccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC--------
Confidence               12333467999999999999998876   479999999998865431100 011122333444444333        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                       ..+..++|+|+++++++....   .| .+.+.+|
T Consensus       219 -~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         219 -RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence             136678999999999997543   44 5666665

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=2.1e-20  Score=150.88  Aligned_cols=216  Identities=17%  Similarity=0.103  Sum_probs=138.4

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      ++.++|+++||||++.||+++++.|++.| ++|++.+|+.....+...++.. ..++..+.+|+++..            
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~G-a~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFG-AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999 9999999965433332222211 246888999999762            


Q ss_pred             c-CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 L-IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 ~-~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      + ..+|++|||||......    ..++++..+++|+.++..+++++    ++.+. ++|++||....             
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~-------------  149 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV-------------  149 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccc-------------
Confidence            1 24899999999765433    23456778899999998888776    33454 89999997754             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                         .+......|..+|.+.+.+.+.++.+   .+++++.+.||.+-.+.....   ........+....         ..
T Consensus       150 ---~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~---------pl  214 (259)
T d1xq1a_         150 ---VSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV---YDDEFKKVVISRK---------PL  214 (259)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------
T ss_pred             ---ccccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh---chHHHHHHHHhCC---------CC
Confidence               12333467999999999999988876   479999999998876542110   1111111111111         11


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      ..+..++|+|+++++++....   .| .+.+.+|-
T Consensus       215 ~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         215 GRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             ---CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCE
Confidence            246788999999999996543   44 56666653

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.84  E-value=9.3e-20  Score=146.92  Aligned_cols=218  Identities=15%  Similarity=0.133  Sum_probs=153.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhh---hcCCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---WIGHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~------------   94 (297)
                      ..+|+++||||++.||+++++.|+++| .+|++.+|+.....+....   .....++..+++|+++..            
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~G-a~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEG-AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            458999999999999999999999999 9999999965433222222   222346888999999862            


Q ss_pred             cCCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      +.++|++|||||...+..     ..++++..+++|+.++..+.+++    ++.+- ++|++||...+             
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-------------  147 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI-------------  147 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-------------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhc-------------
Confidence            236999999999654322     23456778999999999988876    33333 89999998764             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC----hhHHHHHHHHHHcCCCeEEecC
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD----GRVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  237 (297)
                         .+......|..+|.+.+.+.+.++.+   .+++++.+.||.+..|......    ..........+....++     
T Consensus       148 ---~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl-----  219 (258)
T d1iy8a_         148 ---RGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-----  219 (258)
T ss_dssp             ---SBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT-----
T ss_pred             ---cCCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC-----
Confidence               22333467999999999999988876   4799999999988654310000    00011222233333222     


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                          ..+..++|+|+++++++....   .| .+.+.+|..
T Consensus       220 ----~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         220 ----KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             ----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence                236788999999999997543   44 678877754

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.83  E-value=1.6e-20  Score=150.94  Aligned_cols=213  Identities=15%  Similarity=0.101  Sum_probs=148.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++|+++||||++.||+++++.|+++| .+|++.+|+....++....+....++..+.+|+++..            +.+
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~G-a~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEG-AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999 9999999965433222222223357889999999863            236


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cC--CeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      +|++|||||......    ..+++...+++|+.++..+++++.+    .+  .++|++||...+                
T Consensus        83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~----------------  146 (251)
T d1zk4a1          83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF----------------  146 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT----------------
T ss_pred             ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee----------------
Confidence            999999999776543    2344667889999999998887633    33  378999997753                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                      .+......|..+|...+.+.+.++.+     ++++++.+.||.+..+.......   ...........++         .
T Consensus       147 ~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~---~~~~~~~~~~~pl---------~  214 (251)
T d1zk4a1         147 VGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG---AEEAMSQRTKTPM---------G  214 (251)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT---HHHHHTSTTTCTT---------S
T ss_pred             ccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC---HHHHHHHHhCCCC---------C
Confidence            12223467999999999998887654     36999999999886543211100   1111111111111         2


Q ss_pred             eeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          243 SFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      .+..++|+|+++++++....   .| .+.+.+|
T Consensus       215 R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         215 HIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence            46789999999999997543   44 6777665

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.83  E-value=1.4e-19  Score=145.92  Aligned_cols=218  Identities=14%  Similarity=0.065  Sum_probs=151.7

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------   94 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------   94 (297)
                      ++.++|+++||||++.||+++++.|+++| ++|++++|+.....+..+.+.. ...+.++.+|+++..            
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G-~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLG-ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            34579999999999999999999999999 9999999975433332222221 245778899999862            


Q ss_pred             c-CCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 L-IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 ~-~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                      . ...|+++|+||......    ..+++...+++|+.++..+.+++.    +.+. ++|++||....             
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~-------------  147 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF-------------  147 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT-------------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccc-------------
Confidence            1 24899999999766433    334567788999999988887663    3444 89999998764             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEecCCc
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                         .+......|..+|.+.+.+.+.++.+   .++++..+.||.+..+......  ..........+....++       
T Consensus       148 ---~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-------  217 (258)
T d1ae1a_         148 ---SALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-------  217 (258)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-------
T ss_pred             ---cccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC-------
Confidence               23333467999999999999998876   4799999999999876432110  11112333444333332       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                        ..+...+|+|+++++++....   +| .+.+.+|
T Consensus       218 --gR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG  251 (258)
T d1ae1a_         218 --GRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  251 (258)
T ss_dssp             --CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence              136789999999999996443   45 5777765

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=6.8e-20  Score=146.85  Aligned_cols=215  Identities=18%  Similarity=0.169  Sum_probs=149.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+|+++||||++.||+++++.|+++| ++|++.+|+.....+ +.+.+  .+..++.+|+++..            ..+
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~G-a~V~i~~r~~~~~~~-~~~~~--~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSG-ARVVICDKDESGGRA-LEQEL--PGAVFILCDVTQEDDVKTLVSETIRRFGR   79 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHC--TTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHH-HHHhc--CCCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999999999 999999986432221 22222  46788999999862            236


Q ss_pred             cCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHH----HcCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      +|++||+||......     ..++++..+++|+.++..+++++.    +.+-++|++||.....                
T Consensus        80 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~----------------  143 (250)
T d1ydea1          80 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI----------------  143 (250)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH----------------
T ss_pred             CCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccc----------------
Confidence            999999999654322     224466788999999988888773    3445899999987642                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCC--CChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNI--DDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      +......|..+|.+.+.+.+.++.+   .+++++.+.||.|-.+....  ....-....+.......++         ..
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R  214 (250)
T d1ydea1         144 GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GR  214 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SS
T ss_pred             cccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC---------CC
Confidence            2233467999999999999998876   47999999999886542100  0000011222333332222         14


Q ss_pred             eeeHHHHHHHHHHHHhcCC--Cc-cEEecCCCc
Q 022414          244 FCYVSDMVDGLIRLMEGEN--TG-PINIGNPGE  273 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~--~~-~~~i~~~~~  273 (297)
                      +..++|+|+++++++....  +| .+.+.+|-.
T Consensus       215 ~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~  247 (250)
T d1ydea1         215 MGQPAEVGAAAVFLASEANFCTGIELLVTGGAE  247 (250)
T ss_dssp             CBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred             CCCHHHHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence            6789999999999986433  44 677777644

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.83  E-value=1.1e-19  Score=146.97  Aligned_cols=223  Identities=17%  Similarity=0.088  Sum_probs=153.6

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc----------
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL----------   94 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~----------   94 (297)
                      +++.++|+++||||++.||+++++.|+++| ++|++++|+.....+...++..  ..++..+++|+++..          
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~G-a~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAG-ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999 9999999976554433333221  246888999999862          


Q ss_pred             --cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----c-CC-eEEEEecceeecCCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V-GA-RILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~-r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                        ..++|++|||||......    ..++++..+++|+.++..+.+++.+    . +. +++..||...........    
T Consensus        83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~----  158 (260)
T d1h5qa_          83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL----  158 (260)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET----
T ss_pred             HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc----
Confidence              236999999999765433    2344667889999998888776533    2 33 566666654422110000    


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                           .+......|..+|.+.+.+.+.++.+   .+++++.+.||.+-.+.....    ............++       
T Consensus       159 -----~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~----~~~~~~~~~~~~pl-------  222 (260)
T d1h5qa_         159 -----NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM----DKKIRDHQASNIPL-------  222 (260)
T ss_dssp             -----TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS----CHHHHHHHHHTCTT-------
T ss_pred             -----ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc----CHHHHHHHHhcCCC-------
Confidence                 11123357999999999999988865   479999999999876653222    12333333443332       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                        ..+..++|+|+++++++....   +| .+.+.+|.
T Consensus       223 --~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         223 --NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             --SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             --CCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCe
Confidence              135678999999999997543   44 67777764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.82  E-value=1.1e-19  Score=146.62  Aligned_cols=214  Identities=15%  Similarity=0.082  Sum_probs=150.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      +|.++||||++.||+++++.|+++| ++|++.+|+.....+...++.. ..++..+++|+++..            ..++
T Consensus         2 gKValITGas~GIG~aia~~la~~G-a~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEG-LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5788999999999999999999999 9999999964333322222211 236888999999862            2369


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH------cCC-eEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR------VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~------~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      |++|||||......    ..+++...+++|+.++..+++++.+      .+. ++|++||...+                
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~----------------  144 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK----------------  144 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT----------------
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc----------------
Confidence            99999999765443    2345667899999999999988743      343 78999887654                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCCh-------hHHHHHHHHHHcCCCeEEecC
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG-------RVVSNFIAQAIRGEPLTVQAP  237 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  237 (297)
                      .+......|+.+|...+.+.+.++.+.   +++++.+.||.+-.+.......       ...+.....+.+..++     
T Consensus       145 ~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl-----  219 (257)
T d2rhca1         145 QGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-----  219 (257)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT-----
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC-----
Confidence            233334679999999999999998873   6999999999886542100000       0012233333333322     


Q ss_pred             CceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       238 ~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                          ..+..++|+|+++++++....   .| .+.+.+|
T Consensus       220 ----gR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         220 ----GRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             ----SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence                136789999999999996543   44 6677665

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.82  E-value=1.2e-19  Score=146.57  Aligned_cols=216  Identities=16%  Similarity=0.077  Sum_probs=149.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      .++|+++||||++.||+++++.|+++| ++|++.+|+.....+....+.. ..++..+.+|+++..            ..
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEG-TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999 9999999965333222222211 236788999999862            23


Q ss_pred             CcCEEEEccCCCCC-cc----cccChhhhHHHhHHHHHHHHHHHH----HcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        97 ~~d~vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ++|++||+||.... ..    ..+++...+++|+.++..+.+++.    +.+. ++|++||...+.              
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~--------------  147 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK--------------  147 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS--------------
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc--------------
Confidence            69999999996543 21    234466788999999988887763    3444 899999987642              


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCC------------CChhHHHHHHHHHHcCCC
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNI------------DDGRVVSNFIAQAIRGEP  231 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~------------~~~~~~~~~~~~~~~~~~  231 (297)
                        +......|..+|.+.+.+.+.++.+   .+++++.+.||.|-.+....            ............+....+
T Consensus       148 --~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  225 (260)
T d1zema1         148 --GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP  225 (260)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCC
Confidence              2333467999999999999988876   47999999999987653100            000011122223333322


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +         ..+..++|+|+++++++....   .| .+.+.+|
T Consensus       226 l---------~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         226 M---------RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             T---------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             C---------CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            2         135678999999999997543   34 5666553

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.82  E-value=3.6e-19  Score=141.52  Aligned_cols=203  Identities=17%  Similarity=0.166  Sum_probs=146.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------ccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~d~vi~~  104 (297)
                      ++|+++||||++.||+++++.|+++| ++|++.+|+.    +.+.+    ...+++.+|+.+.      ...++|++|||
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~G-a~V~~~~r~~----~~l~~----~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEG-AEVTICARNE----ELLKR----SGHRYVVCDLRKDLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCH----HHHHH----TCSEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCH----HHHHh----cCCcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence            58999999999999999999999999 9999999853    22222    3456778898764      34479999999


Q ss_pred             cCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCCh
Q 022414          105 ACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (297)
Q Consensus       105 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~  175 (297)
                      ||......    ..+++...+++|+.++..+++++    ++.+. ++|++||....                .+......
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~----------------~~~~~~~~  137 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI----------------SPIENLYT  137 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------------SCCTTBHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccc----------------cccccccc
Confidence            99765433    23446677889999888777766    44555 89999887653                23334467


Q ss_pred             HHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHH-HHHHHHHHcCCCeEEecCCceeEeeeeHHHHH
Q 022414          176 YDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV-SNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (297)
Q Consensus       176 Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  251 (297)
                      |..+|.+.+.+.+.++.+   .+++++.+.||.+-.+..    .... ......+....++         ..+...+|+|
T Consensus       138 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~----~~~~~~~~~~~~~~~~pl---------~R~~~pediA  204 (234)
T d1o5ia_         138 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV----KELLSEEKKKQVESQIPM---------RRMAKPEEIA  204 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTH----HHHSCHHHHHHHHTTSTT---------SSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhh----hhhcCHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence            999999999999988876   479999999998876642    1111 1222233333222         2367899999


Q ss_pred             HHHHHHHhcCC---Cc-cEEecCC
Q 022414          252 DGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       252 ~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +++++++....   +| .+.+.+|
T Consensus       205 ~~v~fL~S~~s~~itG~~i~vDGG  228 (234)
T d1o5ia_         205 SVVAFLCSEKASYLTGQTIVVDGG  228 (234)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhChhhcCCcCcEEEECcc
Confidence            99999997543   44 6677665

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.82  E-value=2.1e-20  Score=150.34  Aligned_cols=214  Identities=18%  Similarity=0.183  Sum_probs=147.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      .++|+++||||++.||+++++.|+++| .+|++.+|+.....+ +.+.+. .+..++++|+++..            ..+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G-a~V~~~~~~~~~~~~-~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   80 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEG-AKVAFSDINEAAGQQ-LAAELG-ERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHHH-HHHHHC-TTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHH-HHHHhC-CCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999 999999986433222 222222 46778899999862            236


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      +|++|||||......    ..++++..+++|+.++..+++++.+    .+-++|++||....                .+
T Consensus        81 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~----------------~~  144 (253)
T d1hxha_          81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSW----------------LP  144 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGT----------------SC
T ss_pred             CCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhh----------------cC
Confidence            999999999765433    2344677889999998888877743    34489999998764                23


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHH-HHHHHHHcCCCeEEecCCceeEe
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVS-NFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      ......|..+|.+.+.+.+.++.+     ++++++.+.||.+..+...    ..++ ...........     .....-.
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~----~~~~~~~~~~~~~~~~-----~~~~~gr  215 (253)
T d1hxha_         145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ----ASLPKGVSKEMVLHDP-----KLNRAGR  215 (253)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH----HHSCTTCCHHHHBCBT-----TTBTTCC
T ss_pred             ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHH----hhCcchhhHHHHHhCc-----cccccCC
Confidence            334467999999999998877754     2489999999988654210    0000 00011111110     0011124


Q ss_pred             eeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +..++|+|+++++++....   .| .+++.+|
T Consensus       216 ~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         216 AYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             EECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            6789999999999997543   44 5777665

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.82  E-value=1.2e-19  Score=145.11  Aligned_cols=209  Identities=15%  Similarity=0.048  Sum_probs=147.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cCCc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LIEV   98 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~~~   98 (297)
                      ..|+||||++.||+++++.|+++| ++|++.+++.....+.+.+.+.  ..++..+++|+++..            ..++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~G-a~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAG-CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            368999999999999999999999 9998876643332222222221  246788999999862            2369


Q ss_pred             CEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      |++|||||......    ..++++..+++|+.++..+.+++    ++++- ++|++||...+-                +
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----------------~  144 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI----------------G  144 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------C
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC----------------C
Confidence            99999999766443    23456678899999998887776    44454 999999987642                2


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (297)
                      ......|+.+|.+.+.+.+.++.+   .+++++.+.||.+-.+...    .+.......+....++         ..+..
T Consensus       145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~----~~~~~~~~~~~~~~pl---------~R~~~  211 (244)
T d1edoa_         145 NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA----KLGEDMEKKILGTIPL---------GRTGQ  211 (244)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH----TTCHHHHHHHHTSCTT---------CSCBC
T ss_pred             CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH----HhhHHHHHHHHhcCCC---------CCCcC
Confidence            233467999999999999998876   4799999999988654321    1122333444443332         13678


Q ss_pred             HHHHHHHHHHHHhcCC----Cc-cEEecCC
Q 022414          247 VSDMVDGLIRLMEGEN----TG-PINIGNP  271 (297)
Q Consensus       247 v~Dva~~~~~~~~~~~----~~-~~~i~~~  271 (297)
                      ++|+|+++++++..+.    .| .+.+.+|
T Consensus       212 p~dvA~~v~fLa~S~~a~~itG~~i~vdGG  241 (244)
T d1edoa_         212 PENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             HHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             HHHHHHHHHHHHCCchhcCCcCCeEEeCCC
Confidence            8999999999864332    44 6677665

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=1.2e-19  Score=146.66  Aligned_cols=219  Identities=13%  Similarity=0.020  Sum_probs=147.8

Q ss_pred             ccccCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc----------
Q 022414           27 KFFQSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL----------   94 (297)
Q Consensus        27 ~~~~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~----------   94 (297)
                      ..+.++|+++||||+|  .||+++++.|+++| ++|++.+|+.....+.............+++|+++..          
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~G-a~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAG-AEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVK   81 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCC-CEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHH
Confidence            4567899999999998  79999999999999 9999888864322211111112235678899999862          


Q ss_pred             --cCCcCEEEEccCCCCCcc--------cccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                        ..++|++||+||......        ...++...+++|+.+...+++++...-   -++|++||.....         
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~---------  152 (256)
T d1ulua_          82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK---------  152 (256)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS---------
T ss_pred             HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC---------
Confidence              236999999998754221        122345578899999999988875432   2689999877542         


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                             +......|..+|.+.+.+.+.++.+   ++++++.+.||.+..+.....  .........+.+..++      
T Consensus       153 -------~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~--~~~~~~~~~~~~~~pl------  217 (256)
T d1ulua_         153 -------VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI--PGFTKMYDRVAQTAPL------  217 (256)
T ss_dssp             -------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------CHHHHHHHHHHSTT------
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccch--hhhHHHHHHHHhcCCC------
Confidence                   2333467999999999999998876   479999999998876643221  1112333333333332      


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                         ..+..++|+|+++++++....   .| .+.+.+|..
T Consensus       218 ---~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         218 ---RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             ---SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ---CCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence               125678999999999997643   44 677777644

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.1e-19  Score=149.28  Aligned_cols=217  Identities=14%  Similarity=0.107  Sum_probs=149.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc---hhhhc---CCCceEEEecccCCcc---------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LRKWI---GHPRFELIRHDVTEPL---------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~---~~~~~---~~~~~~~~~~Dl~~~~---------   94 (297)
                      .++|+++||||++.||+++++.|+++| ++|++.+|+.....+.   +....   ...++..+++|+++..         
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~G-a~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELG-SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999 9999999975433222   22111   1246888999999862         


Q ss_pred             ---cCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCC
Q 022414           95 ---LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 ---~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                         ..++|++|||||.......    .+++...+++|+.++..+++++.+    .+. ++|.+|+....           
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~-----------  157 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA-----------  157 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT-----------
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc-----------
Confidence               2369999999997654332    344667889999999998887743    333 67777654321           


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                            .......|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+............+.....+..++       
T Consensus       158 ------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl-------  224 (297)
T d1yxma1         158 ------GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-------  224 (297)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT-------
T ss_pred             ------cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC-------
Confidence                  1222367999999999999998876   479999999999977643211111111122222221111       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                        ..+...+|+|+++++++....    +..+.+.+|..
T Consensus       225 --gR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         225 --KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             --SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence              236678999999999997543    44677776643

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.81  E-value=1.8e-19  Score=143.79  Aligned_cols=211  Identities=18%  Similarity=0.143  Sum_probs=150.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~   97 (297)
                      ..+|+++||||++.||+++++.|.++| ++|++.+|+.....+...++  ..++.++++|+++..            ..+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREG-ASLVAVDREERLLAEAVAAL--EAEAIAVVADVSDPKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTC--CSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHc--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999 99999999754333322222  246788999999862            236


Q ss_pred             cCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcCC--e-EEEEecceeecCCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA--R-ILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r-~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  170 (297)
                      +|++||+||......    ..+++...+++|+.+...+.+++.+.-.  + ++++||.+..                 +.
T Consensus        80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-----------------~~  142 (241)
T d2a4ka1          80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-----------------GA  142 (241)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-----------------CH
T ss_pred             ccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-----------------cc
Confidence            999999999765433    2344667889999999999998866543  3 4444443321                 11


Q ss_pred             CCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      +....|+.+|.+.+.+.+.++++.   ++++..+.||.+-.+....    +.+.....+....++         ..+..+
T Consensus       143 ~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~----~~~~~~~~~~~~~p~---------~r~~~p  209 (241)
T d2a4ka1         143 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG----LPPWAWEQEVGASPL---------GRAGRP  209 (241)
T ss_dssp             HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT----SCHHHHHHHHHTSTT---------CSCBCH
T ss_pred             cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHh----hhHhHHHHHHhCCCC---------CCCcCH
Confidence            224569999999999999998874   5999999999986654221    223334444444333         136689


Q ss_pred             HHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          248 SDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                      +|+|+++++++....   .| .+.+.+|.+
T Consensus       210 ~dva~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         210 EEVAQAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence            999999999997643   44 677777654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.81  E-value=2.7e-19  Score=144.09  Aligned_cols=210  Identities=18%  Similarity=0.070  Sum_probs=145.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cCCcC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LIEVD   99 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~~~d   99 (297)
                      |.++||||++.||+++++.|+++| ++|++.+|+.....+...++.. ..++..+++|+++..            +.++|
T Consensus         2 KValITGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDG-FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            446999999999999999999999 9999999965333222222211 246788999999862            33699


Q ss_pred             EEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHH----HcCC--eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      ++|||||......    ..++++..+++|+.++..+++++.    +.+.  +++++||...+                .+
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~----------------~~  144 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH----------------VG  144 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT----------------SC
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc----------------cc
Confidence            9999999765433    234466788999999988887753    3332  68999987754                23


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHH-----------HHHHHHcCCCeEEe
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSN-----------FIAQAIRGEPLTVQ  235 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~  235 (297)
                      ......|..+|.+.+.+.+.++.+   .+++++.+.||.+-.+..    ..+...           ....+.+..++   
T Consensus       145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~pl---  217 (255)
T d1gega_         145 NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW----AEIDRQVSEAAGKPLGYGTAEFAKRITL---  217 (255)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH----HHHHHHHHHHHTCCTTHHHHHHHTTCTT---
T ss_pred             CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHH----hhhhhhhHhhhcccchhHHHHHHhcCCC---
Confidence            334467999999999999988866   479999999988854421    111111           11112222211   


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                            ..+..++|+|+++++++....   .| .+.+.+|-
T Consensus       218 ------~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         218 ------GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             ------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             ------CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence                  236789999999999997543   44 56776653

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2e-20  Score=150.69  Aligned_cols=218  Identities=16%  Similarity=0.126  Sum_probs=148.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCcc------------c
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~------------~   95 (297)
                      .+|+++||||++.||+++++.|+++| .+|++++|+.....+...++.   ...++.++.+|+++..            .
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKG-AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999 999999997544333222222   2246888999999862            2


Q ss_pred             CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHH----c--C--CeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR----V--G--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~--~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      .++|++||+||...    ..++++.+++|+.+...+.+++.+    .  +  .++|++||...+                
T Consensus        81 G~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~----------------  140 (254)
T d2gdza1          81 GRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL----------------  140 (254)
T ss_dssp             SCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT----------------
T ss_pred             CCcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc----------------
Confidence            36999999999764    356778889999888777766633    2  2  269999998754                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHH--HHH---HhCCcEEEEeeccccCCCCCCCC-hhHH---HHHHHHHHcCCCeEEecCC
Q 022414          168 NPIGVRSCYDEGKRVAETLMFD--YHR---QHGIEIRIARIFNTYGPRMNIDD-GRVV---SNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~--~~~---~~~~~~~ivrp~~v~G~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~  238 (297)
                      .+......|..+|.+.+.+.+.  ++.   ..+++++.+.||.+-.+...... ....   ......+....+       
T Consensus       141 ~~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p-------  213 (254)
T d2gdza1         141 MPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIK-------  213 (254)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHH-------
T ss_pred             cCCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCC-------
Confidence            2333346799999999998875  333   34799999999988543210000 0000   000011111000       


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC--CccEEecCCCcccHHH
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFTMLE  278 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e  278 (297)
                        ...+..++|+|+++++++.+..  +..+.+.+|..+.+.|
T Consensus       214 --~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         214 --YYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             --HHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             --CCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence              1135678999999999998765  4477888887765543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.81  E-value=3e-19  Score=144.68  Aligned_cols=218  Identities=12%  Similarity=0.062  Sum_probs=143.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh----cCCCceEEEecccCCcc-----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW----IGHPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~-----------   94 (297)
                      .++|.++||||++.||+++++.|+++| .+|++.+|+.....+...++    ....++..+++|+++..           
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREG-AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999 99999999654332222222    12236889999999862           


Q ss_pred             -cCCcCEEEEccCCCCCcc--------cccChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEecce-eecCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSE-VYGDPLVHPQD  160 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss~~-~~~~~~~~~~~  160 (297)
                       ..++|++|||||...+..        ..++++..+++|+.++..+++++.+    .+-.+|.++|.. ..         
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~---------  152 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL---------  152 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS---------
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc---------
Confidence             236999999999653221        2244667889999999888877743    344556555543 22         


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC-----hhHHHHHHHHHHcCCCe
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-----GRVVSNFIAQAIRGEPL  232 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~  232 (297)
                             .+......|..+|.+.+.+.+.++.+   .+++++.+.||.+-.+......     ..........+.+..++
T Consensus       153 -------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  225 (264)
T d1spxa_         153 -------HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA  225 (264)
T ss_dssp             -------SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT
T ss_pred             -------ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC
Confidence                   12233466999999999999988876   4799999999999766432110     00111222222222222


Q ss_pred             EEecCCceeEeeeeHHHHHHHHHHHHhcC--C--Cc-cEEecCCCc
Q 022414          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGE--N--TG-PINIGNPGE  273 (297)
Q Consensus       233 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~--~~-~~~i~~~~~  273 (297)
                               ..+...+|+|+++++++..+  .  .| .+.+.+|..
T Consensus       226 ---------~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         226 ---------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             ---------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             ---------CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence                     13667899999999999633  1  44 677777643

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7.9e-19  Score=140.38  Aligned_cols=215  Identities=16%  Similarity=0.081  Sum_probs=151.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc--------ccCCcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP--------LLIEVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--------~~~~~d~v  101 (297)
                      ..+|+++||||++.||+++++.|+++| ++|++.+|+.    +.+.+.....++....+|+.+.        ...++|++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G-~~Vi~~~r~~----~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~l   78 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREG-AKVIATDINE----SKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVL   78 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCH----HHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEeCCH----HHHHHHHhccCCceeeeeccccccccccccccccceeE
Confidence            568999999999999999999999999 9999999953    3344444445677777787654        23479999


Q ss_pred             EEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCCC
Q 022414          102 YHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (297)
Q Consensus       102 i~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  172 (297)
                      ||++|.......    .+++...+++|+.++..+.+++.+    .+. ++|++||....-               .+...
T Consensus        79 Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~---------------~~~~~  143 (245)
T d2ag5a1          79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV---------------KGVVN  143 (245)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT---------------BCCTT
T ss_pred             EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc---------------CCccc
Confidence            999997765432    344667889999999888777643    444 899998865310               13344


Q ss_pred             CChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC--hhHHHHHHHHHHcCCCeEEecCCceeEeeeeH
Q 022414          173 RSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (297)
Q Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  247 (297)
                      ...|+.+|.+.+.+.+.++.+   .+++++.+.||.+-.|......  ..........+....++         ..+...
T Consensus       144 ~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~p  214 (245)
T d2ag5a1         144 RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATA  214 (245)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcCH
Confidence            567999999999999999876   4799999999988765311000  00011223333333332         136788


Q ss_pred             HHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          248 SDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       248 ~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                      +|+|+++.+++....   .| .+.+.+|-.
T Consensus       215 edva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         215 EEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence            999999999997644   44 677777643

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.80  E-value=1.9e-18  Score=138.86  Aligned_cols=210  Identities=16%  Similarity=0.107  Sum_probs=148.1

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchh---hhcCCCceEEEecccCCc-----------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR---KWIGHPRFELIRHDVTEP-----------   93 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~-----------   93 (297)
                      |+..+|+|+||||++.||.+++++|+++| .+|+++.|+.... +.+.   ......++.++.+|++..           
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G-~~vii~~r~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   78 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRN-LKNFVILDRVENP-TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTC-CSEEEEEESSCCH-HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCcccH-HHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999 9888888865442 2222   223445788999999743           


Q ss_pred             --ccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHH----c----CCeEEEEecceeecCCCCCCCCCCC
Q 022414           94 --LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR----V----GARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        94 --~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~----~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                        ...++|++|||||...    .++.+..+++|+.++..+.+++.+    .    +.++|++||...+            
T Consensus        79 ~~~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~------------  142 (254)
T d1sbya1          79 FDQLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF------------  142 (254)
T ss_dssp             HHHHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT------------
T ss_pred             HHHcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc------------
Confidence              1236999999999653    567788999999999888887743    2    1279999998764            


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC-ChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                          .+......|+.+|.....+.+.++.+   .+++++.+.||+|..+..... ...-....+.....+          
T Consensus       143 ----~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----------  208 (254)
T d1sbya1         143 ----NAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS----------  208 (254)
T ss_dssp             ----SCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT----------
T ss_pred             ----cCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcccc----------
Confidence                23444567999999999999888765   479999999999976521000 000000011111111          


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCCCc-cEEecCC
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGENTG-PINIGNP  271 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~~~-~~~i~~~  271 (297)
                        +.....+++|++++.+++...+| ++.+.+|
T Consensus       209 --~~~~~~e~va~~~~~~~~~~~tG~vi~vdgG  239 (254)
T d1sbya1         209 --HPTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             --SCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             --CCCCCHHHHHHHHHHhhhCCCCCCEEEECCC
Confidence              12447899999999999887766 4666665

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.79  E-value=1.1e-18  Score=141.81  Aligned_cols=221  Identities=14%  Similarity=0.055  Sum_probs=146.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC----CCceEEEecccCCcc-----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~-----------   94 (297)
                      .++|+++||||++.||+++++.|.++| .+|++.+|+.....+....+..    ..++..+++|+++..           
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~G-a~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEG-ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999 9999999965432222222211    235889999999862           


Q ss_pred             -cCCcCEEEEccCCCCCccc----cc----ChhhhHHHhHHHHHHHHHHHHH----cCCeEEEEec-ceeecCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIFY----KY----NPVKTIKTNVIGTLNMLGLAKR----VGARILLTST-SEVYGDPLVHPQD  160 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~----~~----~~~~~~~~n~~~~~~l~~~~~~----~~~r~v~~Ss-~~~~~~~~~~~~~  160 (297)
                       ..++|++|||||...+...    .+    ++...+++|+.++..+++++.+    .+-.+|+++| ....         
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~---------  152 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP---------  152 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS---------
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc---------
Confidence             2369999999997654322    11    2566788999998888877633    3345555544 4322         


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC--ChhHHHHHHHHHHc-CCCeEE
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIR-GEPLTV  234 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~--~~~~~~~~~~~~~~-~~~~~~  234 (297)
                             .+......|+.+|.+.+.+.+.++.+   .+++++.+.||.|-.+.....  .............. ....++
T Consensus       153 -------~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  225 (272)
T d1xkqa_         153 -------QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI  225 (272)
T ss_dssp             -------SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT
T ss_pred             -------cCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC
Confidence                   12233467999999999999988866   479999999998876532110  11111111111111 111111


Q ss_pred             ecCCceeEeeeeHHHHHHHHHHHHhc---C-C-CccEEecCCCcc
Q 022414          235 QAPGTQTRSFCYVSDMVDGLIRLMEG---E-N-TGPINIGNPGEF  274 (297)
Q Consensus       235 ~~~~~~~~~~i~v~Dva~~~~~~~~~---~-~-~~~~~i~~~~~~  274 (297)
                             ..+..++|+|+++++++..   . - +..+.+.+|-.+
T Consensus       226 -------gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         226 -------GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             -------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             -------CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence                   1367899999999999853   2 2 446788777554

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.79  E-value=8.2e-19  Score=142.71  Aligned_cols=220  Identities=13%  Similarity=0.045  Sum_probs=147.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc----CCCceEEEecccCCcc-----------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~-----------   94 (297)
                      ..+|+++||||++.||+++++.|++.| .+|++.+|+.....+...++.    ...++..+.+|+++..           
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEG-AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999999 999999996533222222111    1236889999999862           


Q ss_pred             -cCCcCEEEEccCCCCCcc------cccChhhhHHHhHHHHHHHHHHHHH----cCC-eEEEEecceeecCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                       +.++|++|||||......      ..+++...+++|+.+...+.+++.+    .+. +++++||....           
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~-----------  149 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGP-----------  149 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSS-----------
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcc-----------
Confidence             236999999999643321      1234667889999999888877743    444 67777776543           


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCC--ChhHHHHHHHHHHcC-CCeEEec
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRG-EPLTVQA  236 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~  236 (297)
                           .+......|..+|.+.+.+.+.++.+   .+++++.+.||.+-.|.....  ............... ...++  
T Consensus       150 -----~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl--  222 (274)
T d1xhla_         150 -----QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV--  222 (274)
T ss_dssp             -----SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT--
T ss_pred             -----ccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC--
Confidence                 12233467999999999999988876   479999999999876532111  011111111111111 11111  


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcC--C--C-ccEEecCCCc
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGE--N--T-GPINIGNPGE  273 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~--~--~-~~~~i~~~~~  273 (297)
                           ..+..++|+|+++++++..+  .  . ..+.+.+|..
T Consensus       223 -----gR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         223 -----GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             -----SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             -----CCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence                 13678999999999999632  2  4 4678877754

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.79  E-value=1.2e-18  Score=138.77  Aligned_cols=190  Identities=13%  Similarity=0.077  Sum_probs=138.0

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCe-------EEEEecCCCCCccchhhhcC-CCceEEEecccCCcc-----------
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNE-------VIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL-----------   94 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~-------v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~-----------   94 (297)
                      .|+||||++.||+++++.|.++| ++       |++.+|+.....+...+... ...+..+.+|+++..           
T Consensus         3 VvlITGas~GIG~aia~~la~~G-~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAA-RHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHT-TTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhC-ccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            37999999999999999999999 65       78888854332222222211 235778899999862           


Q ss_pred             -cCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~  164 (297)
                       ..++|++|||||.......    .+++...+++|+.++..+++++    ++.+- ++|++||...+             
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-------------  148 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT-------------  148 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc-------------
Confidence             2369999999997665432    3456678899999998887777    44454 89999998764             


Q ss_pred             CCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCcee
Q 022414          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (297)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
                         .+......|..+|.+.+.+.+.++.+   .+++++.+.||.+-.+......                      ....
T Consensus       149 ---~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~----------------------~~~~  203 (240)
T d2bd0a1         149 ---KAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD----------------------DEMQ  203 (240)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC----------------------STTG
T ss_pred             ---CCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcC----------------------HhhH
Confidence               23333467999999999999988876   4799999999998766421100                      0011


Q ss_pred             EeeeeHHHHHHHHHHHHhcCC
Q 022414          242 RSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       242 ~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      ..+..++|+|+++++++..+.
T Consensus       204 ~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         204 ALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             GGSBCHHHHHHHHHHHHTSCT
T ss_pred             hcCCCHHHHHHHHHHHHcCCc
Confidence            134678999999999998875

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=9.9e-19  Score=140.81  Aligned_cols=205  Identities=15%  Similarity=0.038  Sum_probs=141.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~------------   94 (297)
                      .++|.++||||++.||+++++.|+++| ++|++.+|+.....+...++.   ....+..+++|++++.            
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G-~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQG-LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999999999 999999996533232222221   2236788999999862            


Q ss_pred             cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHH----HHcC---CeEEEEecceeecCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG---ARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      ..++|++|||||......    ..+++...++.|+.+...+.+++    ++.+   -++|++||.+.+..          
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~----------  156 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV----------  156 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC----------
T ss_pred             cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC----------
Confidence            236999999999765433    34556678899999888876665    3443   38999999875321          


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                          .|......|+.+|...+.+.+.++.+     .++++..+.||.+-.+..    ...............        
T Consensus       157 ----~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~----~~~~~~~~~~~~~~~--------  220 (257)
T d1xg5a_         157 ----LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA----FKLHDKDPEKAAATY--------  220 (257)
T ss_dssp             ----CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH----HHHTTTCHHHHHHHH--------
T ss_pred             ----CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhh----hhcChhhHHHHHhcC--------
Confidence                12223356999999999999888754     469999999987754321    001001111111111        


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                       ....++.++|+|+++++++..+.
T Consensus       221 -~~~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         221 -EQMKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             -C---CBCHHHHHHHHHHHHHSCT
T ss_pred             -CCCCCcCHHHHHHHHHHHhCChh
Confidence             11346789999999999998765

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.79  E-value=4.5e-19  Score=144.42  Aligned_cols=215  Identities=13%  Similarity=0.068  Sum_probs=146.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~   96 (297)
                      ..++|+++||||++.||+++++.|+++| .+|++++|+.....+...+ + ..++..+.+|+++..            ..
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~G-a~V~i~~r~~~~l~~~~~~-~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEG-AKVAVLDKSAERLAELETD-H-GDNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-H-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHH-c-CCCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999 9999999964332222222 2 146888999999862            23


Q ss_pred             CcCEEEEccCCCCCccc-----c----cChhhhHHHhHHHHHHHHHHH----HHcCCeEEEEecceeecCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIFY-----K----YNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~-----~----~~~~~~~~~n~~~~~~l~~~~----~~~~~r~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      ++|++||+||.......     .    ++++..+++|+.++..+++++    ++.+-++|++||...+            
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~------------  146 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGF------------  146 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGT------------
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhc------------
Confidence            69999999996543221     1    125677899999988887776    4445578888876543            


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHHh--CCcEEEEeeccccCCCCCCCChh-----H-HHHHHHHHHcCCCeEEe
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGR-----V-VSNFIAQAIRGEPLTVQ  235 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ivrp~~v~G~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~  235 (297)
                          .+......|..+|.+.+.+.+.++.+.  +++++.+.||.|-.+...+....     . ...+...+....++   
T Consensus       147 ----~~~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---  219 (276)
T d1bdba_         147 ----YPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI---  219 (276)
T ss_dssp             ----STTSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT---
T ss_pred             ----cCCCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC---
Confidence                122233579999999999999888764  48999999999876543221110     0 11122222222222   


Q ss_pred             cCCceeEeeeeHHHHHHHHHHHHhcC--C---CccEEecCC
Q 022414          236 APGTQTRSFCYVSDMVDGLIRLMEGE--N---TGPINIGNP  271 (297)
Q Consensus       236 ~~~~~~~~~i~v~Dva~~~~~~~~~~--~---~~~~~i~~~  271 (297)
                            ..+..++|+|+++++++..+  .   +..+++.+|
T Consensus       220 ------gR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG  254 (276)
T d1bdba_         220 ------GRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGG  254 (276)
T ss_dssp             ------SSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred             ------CCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence                  13567899999999988532  2   446777765

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.78  E-value=4.8e-18  Score=138.20  Aligned_cols=226  Identities=17%  Similarity=0.084  Sum_probs=151.9

Q ss_pred             cccccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc-----
Q 022414           22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL-----   94 (297)
Q Consensus        22 ~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~-----   94 (297)
                      |++-...+.++|+++||||++.||+++++.|+++| ++|++.+|+.....+.....+.  ...+..+++|+++..     
T Consensus         8 ~~~~~~~sL~gK~~lITGas~GIG~aia~~la~~G-a~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~   86 (272)
T d1g0oa_           8 PLGPQSASLEGKVALVTGAGRGIGREMAMELGRRG-CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRM   86 (272)
T ss_dssp             CSSGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHH
Confidence            33334455779999999999999999999999999 9999998864433222222221  246888999999862     


Q ss_pred             -------cCCcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCC
Q 022414           95 -------LIEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQD  160 (297)
Q Consensus        95 -------~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~  160 (297)
                             ..++|+++|++|......    ..++....+++|+.++..+++++.+.=   -+.++++|.....        
T Consensus        87 ~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~--------  158 (272)
T d1g0oa_          87 FEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA--------  158 (272)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC--------
T ss_pred             HHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc--------
Confidence                   236999999999766543    234466678899999999998886532   2677776654321        


Q ss_pred             CCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCC--------CCCChhHHHHHHH-HHHc
Q 022414          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRM--------NIDDGRVVSNFIA-QAIR  228 (297)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~--------~~~~~~~~~~~~~-~~~~  228 (297)
                             .+......|+.+|.+.+.+.+.++.+   .+++++.+.||.+-.+..        ............. ....
T Consensus       159 -------~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (272)
T d1g0oa_         159 -------KAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ  231 (272)
T ss_dssp             -------SSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH
T ss_pred             -------ccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHc
Confidence                   12233456999999999999988876   479999999998864320        0000000011111 1122


Q ss_pred             CCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      ..++         ..+...+|||+++++++....   +| .+.+.+|.
T Consensus       232 ~~Pl---------gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         232 WSPL---------RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             SCTT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCCC---------CCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            2222         146788999999999997544   44 56777664

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.77  E-value=3.1e-18  Score=140.80  Aligned_cols=223  Identities=13%  Similarity=0.018  Sum_probs=152.1

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCC-----ccchhhhcC--CCceEEEecccCCc-------
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-----KDNLRKWIG--HPRFELIRHDVTEP-------   93 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-----~~~~~~~~~--~~~~~~~~~Dl~~~-------   93 (297)
                      |...+|+++||||++.||+++++.|+++| .+|++.+|.....     .+.+.+...  ........+|+.+.       
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~G-a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v   81 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERG-ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLV   81 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHH
Confidence            45679999999999999999999999999 9999998865322     111111110  01223445566554       


Q ss_pred             -----ccCCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCC
Q 022414           94 -----LLIEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQ  159 (297)
Q Consensus        94 -----~~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~  159 (297)
                           ...++|++|||||.......    .++++..+++|+.++..+++++    ++.+- ++|++||...+.       
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~-------  154 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY-------  154 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-------
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC-------
Confidence                 22369999999998765442    3446678899999998888876    44555 999999987642       


Q ss_pred             CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEec
Q 022414          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (297)
                               +......|+.+|...+.+.+.++.+   ++++++.+.|+.+-.+.....    ...+              
T Consensus       155 ---------~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~----~~~~--------------  207 (302)
T d1gz6a_         155 ---------GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM----PEDL--------------  207 (302)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS----CHHH--------------
T ss_pred             ---------CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC----cHhh--------------
Confidence                     2223467999999999999998876   479999999987643321111    0111              


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC--Cc-cEEecC-------------------CCcccHHHHHHHHHHhhccc
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN--TG-PINIGN-------------------PGEFTMLELAENVKEVNFYL  290 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~--~~-~~~i~~-------------------~~~~s~~e~~~~i~~~~g~~  290 (297)
                           ...+.++|+|.++++++....  +| .+.+.+                   +.+.+..++.+.+.+....+
T Consensus       208 -----~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~  278 (302)
T d1gz6a_         208 -----VEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  278 (302)
T ss_dssp             -----HHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             -----HhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence                 123356999999999886432  33 333221                   24568889988888876654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.77  E-value=2.8e-18  Score=138.52  Aligned_cols=215  Identities=16%  Similarity=0.113  Sum_probs=146.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc------------cC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~------------~~   96 (297)
                      .+|+++||||++.||+++++.|+++| ++|++..+......+...+.+.  ..++..+.+|+++..            ..
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G-~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRG-ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999 9998877754433333333322  236788999999862            23


Q ss_pred             CcCEEEEccCCCCCcc----cccChhhhHHHhHHHHHHHHHHHHHcCC---eEEEEecce-eecCCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSE-VYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~v~~Ss~~-~~~~~~~~~~~e~~~~~~~  168 (297)
                      ++|++||+||......    ..++++..+++|+.+...+++++.+.=.   +++.++|.. ..                .
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~----------------~  147 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM----------------T  147 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC----------------C
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccc----------------c
Confidence            6999999999765443    2344667789999999998888865321   455555433 22                1


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCC--------CCCC-hhHHHHHHHHHHcCCCeEEec
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRM--------NIDD-GRVVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~  236 (297)
                      +......|..+|.+.+.+.+.++.+   .++++..+.||++-.+..        .... ......+...+.+..++    
T Consensus       148 ~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl----  223 (259)
T d1ja9a_         148 GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL----  223 (259)
T ss_dssp             SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT----
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC----
Confidence            2223367999999999999988876   479999999998864310        0000 01112233333333332    


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCC
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                           ..+...+|||+++++++....   +| .+.+.+|
T Consensus       224 -----~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG  257 (259)
T d1ja9a_         224 -----KRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  257 (259)
T ss_dssp             -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence                 136789999999999998654   44 5666665

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.2e-18  Score=136.41  Aligned_cols=194  Identities=12%  Similarity=0.021  Sum_probs=141.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------c
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------~   95 (297)
                      +..+|.|+||||++.||++++++|+++| .+|++.+|+..+..+...+.. ...++..+.+|+++..            .
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G-~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLK-SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            3568999999999999999999999999 999999996543222222211 1246889999999862            2


Q ss_pred             CCcCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      .++|++|||||........    +.++..+++|+.++..+.+++    ++.+- ++|++||...+               
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~---------------  147 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH---------------  147 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C---------------
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc---------------
Confidence            3699999999987654432    335567899999988887766    44555 89999998764               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH------hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ------HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                       .+......|..+|.+.+.+.+.++.+      .++++..+.||.+-.+.....                 .      ..
T Consensus       148 -~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~-----------------~------~~  203 (244)
T d1yb1a_         148 -VSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-----------------S------TS  203 (244)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-----------------H------HH
T ss_pred             -CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc-----------------C------cc
Confidence             23333467999999999999988865      368999999988765432100                 0      00


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      ....+..+|+|+.++..+..+.
T Consensus       204 ~~~~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         204 LGPTLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             HCCCCCHHHHHHHHHHHHHTTC
T ss_pred             ccCCCCHHHHHHHHHHHHhcCC
Confidence            1134568999999998887764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.76  E-value=3.6e-18  Score=140.66  Aligned_cols=224  Identities=12%  Similarity=0.001  Sum_probs=147.9

Q ss_pred             cccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC--CCceEEEecccCCcc-------
Q 022414           24 RFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPL-------   94 (297)
Q Consensus        24 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~-------   94 (297)
                      .++.....+|+++||||+|.||+++++.|++.| ++|++++|+.....+...++..  ...+..+++|+++..       
T Consensus        17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~G-a~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~   95 (294)
T d1w6ua_          17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLG-AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS   95 (294)
T ss_dssp             CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhh
Confidence            344456778999999999999999999999999 9999999975443333333221  246778899999863       


Q ss_pred             -----cCCcCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHHH----Hc-CC-eEEEEecceeecCCCCCCC
Q 022414           95 -----LIEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAK----RV-GA-RILLTSTSEVYGDPLVHPQ  159 (297)
Q Consensus        95 -----~~~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~----~~-~~-r~v~~Ss~~~~~~~~~~~~  159 (297)
                           ..++|+++|+||........    .+....+.+|......+...+.    .. +. .++.+||.....       
T Consensus        96 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~-------  168 (294)
T d1w6ua_          96 ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET-------  168 (294)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH-------
T ss_pred             hhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh-------
Confidence                 23699999999976654332    2344556677776666554432    22 23 466666655432       


Q ss_pred             CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEec
Q 022414          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (297)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (297)
                               +......|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+....... .............++    
T Consensus       169 ---------~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~~pl----  234 (294)
T d1w6ua_         169 ---------GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD-PTGTFEKEMIGRIPC----  234 (294)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CC-TTSHHHHHHHTTCTT----
T ss_pred             ---------cccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccC-CcHHHHHHHhhcCCC----
Confidence                     2222356999999999999988876   47999999999997765311100 011223333333332    


Q ss_pred             CCceeEeeeeHHHHHHHHHHHHhcCC----CccEEecCCCcc
Q 022414          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (297)
Q Consensus       237 ~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  274 (297)
                           ..+..++|+|+++++++....    +..+.+.+|..+
T Consensus       235 -----~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         235 -----GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEV  271 (294)
T ss_dssp             -----SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             -----CCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChhh
Confidence                 136678999999999997543    446788777543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.76  E-value=9.2e-18  Score=134.79  Aligned_cols=209  Identities=13%  Similarity=0.055  Sum_probs=143.9

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------------cCCcCEE
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEVDQI  101 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~~~d~v  101 (297)
                      +++||||++.||+++++.|.++| ++|++.+|+..... ++...    ...+.++|+++..            +-++|++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~G-a~V~i~~r~~~~~~-~~~~~----~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAG-HTVACHDESFKQKD-ELEAF----AETYPQLKPMSEQEPAELIEAVTSAYGQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTT-CEEEECCGGGGSHH-HHHHH----HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHH-HHHhh----hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999 99999998654332 22221    1123456766542            2369999


Q ss_pred             EEccCCCCC-cc----cccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 022414          102 YHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (297)
Q Consensus       102 i~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  171 (297)
                      |||||.... ..    ..+++...+++|+.+...+++++    ++.+- ++|++||...+.                +..
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~----------------~~~  139 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG----------------PWK  139 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS----------------CCT
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc----------------ccc
Confidence            999986532 22    22446677889999988887766    44444 899999987542                223


Q ss_pred             CCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChh----HHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGR----VVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       172 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      ....|..+|...+.+.+.++.+   .+++++.+.||.+-.+........    .-+.....+.+..++         ..+
T Consensus       140 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl---------~R~  210 (252)
T d1zmta1         140 ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL---------QRL  210 (252)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS---------SSC
T ss_pred             cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC---------CCC
Confidence            3367999999999999998876   479999999999976643221100    112333334333332         136


Q ss_pred             eeHHHHHHHHHHHHhcCC----CccEEecCCCc
Q 022414          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~  273 (297)
                      ...+|+|+++++++....    +..+.+.+|-.
T Consensus       211 g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         211 GTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             BCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            688999999999997655    44677777643

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.4e-17  Score=134.58  Aligned_cols=215  Identities=16%  Similarity=0.131  Sum_probs=141.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC--Cccchhh---hc--CCCceEEEecccCCcc----------c
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--SKDNLRK---WI--GHPRFELIRHDVTEPL----------L   95 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~---~~--~~~~~~~~~~Dl~~~~----------~   95 (297)
                      |.|+||||++.||+++++.|.++| .+|+.+.+....  ..+.+.+   .+  ...++..+++|+++..          .
T Consensus         3 kVvlITGassGIG~a~A~~la~~G-a~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDP-SQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCT-TCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCC-CCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            457899999999999999999999 665544433211  1111211   11  2347889999999862          2


Q ss_pred             CCcCEEEEccCCCCCccc----ccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~  166 (297)
                      ..+|+++|++|.......    .+++...+++|+.++..+++++    ++.+- ++|++||....               
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~---------------  146 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL---------------  146 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT---------------
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc---------------
Confidence            369999999997765443    3446667889999988888776    44565 89999998764               


Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCC-----------hhHHHHHHHHHHcCCCe
Q 022414          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-----------GRVVSNFIAQAIRGEPL  232 (297)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~-----------~~~~~~~~~~~~~~~~~  232 (297)
                       .+......|..+|.+.+.+.+.++.+   .+++++.+.||.+-.+......           ......+...+...+..
T Consensus       147 -~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
T d1jtva_         147 -MGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV  225 (285)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhh
Confidence             23334467999999999999988876   4799999999998765321100           00111111111111111


Q ss_pred             EEecCCceeEeeeeHHHHHHHHHHHHhcCCCccEEecCC
Q 022414          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNP  271 (297)
Q Consensus       233 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i~~~  271 (297)
                      .       ......++|||++++++++.+....+++.+.
T Consensus       226 ~-------~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~  257 (285)
T d1jtva_         226 F-------REAAQNPEEVAEVFLTALRAPKPTLRYFTTE  257 (285)
T ss_dssp             H-------HHHCBCHHHHHHHHHHHHHCSSCCSEEESCS
T ss_pred             h-------cccCCCHHHHHHHHHHHHhCCCCCeEEecHH
Confidence            0       0124578999999999999887667777664

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.74  E-value=2.5e-16  Score=126.19  Aligned_cols=164  Identities=15%  Similarity=0.069  Sum_probs=119.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHh---cCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc-------------
Q 022414           32 NMRILVTGGAGFIGSHLVDKLME---NEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL-------------   94 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~---~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~-------------   94 (297)
                      ||+|+||||++.||+++++.|++   +| ++|++.+|+.....+ +.+.. ...++.++.+|+++..             
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPP-QHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCC-SEEEEEESCTTSCHH-HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCC-CEEEEEECCHHHHHH-HHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            68899999999999999999974   57 999999998655433 22222 2357899999999862             


Q ss_pred             -cCCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHH----c-----------CC-eEEEEecceeec
Q 022414           95 -LIEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----V-----------GA-RILLTSTSEVYG  152 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~-----------~~-r~v~~Ss~~~~~  152 (297)
                       ..++|++|||||......     ..++....+++|+.++..+.+++..    .           +. ++|.+||....-
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence             125999999999755432     1223556889999999888877632    1           22 789998865321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCC
Q 022414          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPR  210 (297)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~  210 (297)
                      ..             .+......|..||.+...+.+.++.+   .++++..+.||.+-.+.
T Consensus       160 ~~-------------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         160 QG-------------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             TT-------------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             CC-------------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            10             12233457999999999999888765   47999999999886653

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=8.5e-17  Score=129.04  Aligned_cols=201  Identities=15%  Similarity=0.148  Sum_probs=138.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc------------ccCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------------LLIE   97 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------------~~~~   97 (297)
                      .++|.++||||++.||+++++.|.++| ++|++++|+.....+...++  .........|+.+.            ....
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQG-ASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHh--CCCccccccccccccccccccccccccccc
Confidence            468999999999999999999999999 99999999765443333322  23566677777654            1235


Q ss_pred             cCEEEEccCCCCCcc----------cccChhhhHHHhHHHHHHHHHHHHHc----------CC-eEEEEecceeecCCCC
Q 022414           98 VDQIYHLACPASPIF----------YKYNPVKTIKTNVIGTLNMLGLAKRV----------GA-RILLTSTSEVYGDPLV  156 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~-r~v~~Ss~~~~~~~~~  156 (297)
                      .|.++++++......          ..+++...+++|+.++..+.+++.+.          +. ++|++||...+.    
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~----  155 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE----  155 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH----
T ss_pred             ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc----
Confidence            788888776443221          12345577899999999999888542          22 699999987652    


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeE
Q 022414          157 HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLT  233 (297)
Q Consensus       157 ~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  233 (297)
                                  +......|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+...    .+............++ 
T Consensus       156 ------------~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~----~~~~~~~~~~~~~~pl-  218 (248)
T d2o23a1         156 ------------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT----SLPEKVCNFLASQVPF-  218 (248)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSS-
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh----cCCHHHHHHHHhcCCC-
Confidence                        3333467999999999999998876   4799999999998765422    1222222223332221 


Q ss_pred             EecCCceeEeeeeHHHHHHHHHHHHhcC
Q 022414          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       234 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~  261 (297)
                       .      ..+..++|+|++++++++..
T Consensus       219 -~------~R~g~peevA~~v~fL~s~~  239 (248)
T d2o23a1         219 -P------SRLGDPAEYAHLVQAIIENP  239 (248)
T ss_dssp             -S------CSCBCHHHHHHHHHHHHHCT
T ss_pred             -C------CCCcCHHHHHHHHHHHHhCC
Confidence             0      13668999999999998754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.73  E-value=1.1e-16  Score=129.28  Aligned_cols=216  Identities=16%  Similarity=0.156  Sum_probs=145.0

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCc--cchhhhc--CCCceEEEecccCCcc----------
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWI--GHPRFELIRHDVTEPL----------   94 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~Dl~~~~----------   94 (297)
                      ..++.+++||||+|.||+++++.|.++|...|+++.|+.....  +.+...+  ...++.++.+|+++..          
T Consensus         6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~   85 (259)
T d2fr1a1           6 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG   85 (259)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccc
Confidence            3457899999999999999999999999336888888643222  1111111  1246889999999852          


Q ss_pred             -cCCcCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHHHHcCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           95 -LIEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                       ...+|.|+|++|........    ++....+++|+.+..++.+++...+. ++|++||....-                
T Consensus        86 ~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~----------------  149 (259)
T d2fr1a1          86 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF----------------  149 (259)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT----------------
T ss_pred             ccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhcc----------------
Confidence             22589999999976654332    33455678999999999998877776 899999987642                


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHHhCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHH
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  248 (297)
                      +......|..+|...+.+.+.+..+ +++++.+.||.+.+++...       ......+.       ..|   ...+..+
T Consensus       150 g~~~~~~YaAaka~l~~la~~~~~~-Gi~v~~I~pg~~~~~g~~~-------~~~~~~~~-------~~G---~~~~~~~  211 (259)
T d2fr1a1         150 GAPGLGGYAPGNAYLDGLAQQRRSD-GLPATAVAWGTWAGSGMAE-------GPVADRFR-------RHG---VIEMPPE  211 (259)
T ss_dssp             CCTTCTTTHHHHHHHHHHHHHHHHT-TCCCEEEEECCBC-------------------CT-------TTT---EECBCHH
T ss_pred             CCcccHHHHHHHHhHHHHHHHHHhC-CCCEEECCCCcccCCcccc-------chHHHHHH-------hcC---CCCCCHH
Confidence            2222356999999999988777654 8999999999887665211       11111111       111   3457899


Q ss_pred             HHHHHHHHHHhcCCCccEEecCCCcccHHHHHHH
Q 022414          249 DMVDGLIRLMEGENTGPINIGNPGEFTMLELAEN  282 (297)
Q Consensus       249 Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~  282 (297)
                      ++++++..++..+......+    ++.|..+...
T Consensus       212 ~~~~~l~~~l~~~~~~~~v~----~~d~~~~~~~  241 (259)
T d2fr1a1         212 TACRALQNALDRAEVCPIVI----DVRWDRFLLA  241 (259)
T ss_dssp             HHHHHHHHHHHTTCSSCEEC----EECHHHHHHH
T ss_pred             HHHHHHHHHHhCCCceEEEE----eCcHHHHHHh
Confidence            99999999998876333322    2456555443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=2e-16  Score=127.69  Aligned_cols=216  Identities=14%  Similarity=0.042  Sum_probs=144.4

Q ss_pred             cCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCc------------c
Q 022414           30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEP------------L   94 (297)
Q Consensus        30 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~------------~   94 (297)
                      ..+|+++||||+|  .||+++++.|+++| ++|++.+|+... .+...+.. ........+.|+.+.            .
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G-~~V~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREG-AELAFTYQNDKL-KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTT-CEEEEEESSTTT-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcC-CEEEEEeCCHHH-HHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            4689999999999  79999999999999 999999997432 22222222 123556677777664            2


Q ss_pred             cCCcCEEEEccCCCCCcccc---------cChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEecceeecCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIFYK---------YNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDES  162 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~Ss~~~~~~~~~~~~~e~  162 (297)
                      ....|+++|+++........         +........|..+...+.+++...-   ..++++||....           
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~-----------  149 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE-----------  149 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-----------
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc-----------
Confidence            33689999999876543321         1123345677777777777775532   257888887642           


Q ss_pred             CCCCCCCCCCCChHHHhHHHHHHHHHHHHHHh---CCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCc
Q 022414          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (297)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                           .+.+....|..+|.+.+.+.+.++.+.   +++++.+.||.+..+......  .............++       
T Consensus       150 -----~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~--~~~~~~~~~~~~~pl-------  215 (258)
T d1qsga_         150 -----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK--DFRKMLAHCEAVTPI-------  215 (258)
T ss_dssp             -----SBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST--THHHHHHHHHHHSTT-------
T ss_pred             -----cCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc--hhhhHHHHHHhCCCC-------
Confidence                 122334679999999999999988774   699999999999877543211  112222222322222       


Q ss_pred             eeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCcc
Q 022414          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGEF  274 (297)
Q Consensus       240 ~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~~  274 (297)
                        ..+..++|+|+++.+++....   +| .+.+.+|-.+
T Consensus       216 --~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         216 --RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             --SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             --CCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHH
Confidence              135678999999999997543   44 5777776543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.71  E-value=4.8e-16  Score=124.62  Aligned_cols=206  Identities=13%  Similarity=0.018  Sum_probs=134.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc--------------c
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------------L   95 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------------~   95 (297)
                      ..|+|+||||++.||.+++++|+++|. ..|++..|+..... .+.+.. ..++.++++|+++..              .
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~-~l~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-ELKSIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH-HHHTCC-CTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHH-HHHHhh-CCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            358999999999999999999999993 36888888654332 222222 347899999999862              1


Q ss_pred             CCcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHH----c------------CCeEEEEecceeecCC
Q 022414           96 IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----V------------GARILLTSTSEVYGDP  154 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~------------~~r~v~~Ss~~~~~~~  154 (297)
                      .++|++|||||......     ..++.+..+++|+.++..+.+++..    .            ..+++.+|+....-..
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence            24899999999754322     1233567899999999888877632    1            0146666665432111


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCC
Q 022414          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP  231 (297)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  231 (297)
                      ...         ..+..+...|..||.+...+.+.++.+   .++++..+.||.|-.+..                 ++ 
T Consensus       160 ~~~---------~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~-----------------~~-  212 (250)
T d1yo6a1         160 NTS---------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG-----------------GK-  212 (250)
T ss_dssp             CCS---------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------
T ss_pred             Ccc---------cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC-----------------CC-
Confidence            000         012334457999999999999988865   479999999987754320                 00 


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC---CccEEecCCCccc
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNPGEFT  275 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s  275 (297)
                                .....+++.|+.++..+....   +|.|+..+++++.
T Consensus       213 ----------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~~  249 (250)
T d1yo6a1         213 ----------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             ----------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             ----------CCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeCC
Confidence                      012456888888888887654   6666665555544

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=2.9e-16  Score=126.61  Aligned_cols=207  Identities=9%  Similarity=-0.007  Sum_probs=139.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHh---cCCCeEEEEecCCCCCccchhh---hcCCCceEEEecccCCcc---------
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLME---NEKNEVIVVDNYFTGSKDNLRK---WIGHPRFELIRHDVTEPL---------   94 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~---~g~~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~---------   94 (297)
                      ..+|.++||||++.||+++++.|.+   +| ++|++++|+.....+...+   .....++..+.+|+++..         
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G-~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPG-SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTT-CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCC-CEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            4578999999999999999999986   68 9999999965432222221   122346888999999852         


Q ss_pred             -------cCCcCEEEEccCCCCCcc-------cccChhhhHHHhHHHHHHHHHHHHH----cC-C--eEEEEecceeecC
Q 022414           95 -------LIEVDQIYHLACPASPIF-------YKYNPVKTIKTNVIGTLNMLGLAKR----VG-A--RILLTSTSEVYGD  153 (297)
Q Consensus        95 -------~~~~d~vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~--r~v~~Ss~~~~~~  153 (297)
                             ....|+++|+||......       ..+++...+++|+.++..+.+++.+    .+ .  ++|++||...+  
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~--  160 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL--  160 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT--
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc--
Confidence                   124789999998653211       1234566889999999999998854    22 2  68999998754  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH-hCCcEEEEeeccccCCCCCCCChh-HHHHHHHHHHcCCC
Q 022414          154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ-HGIEIRIARIFNTYGPRMNIDDGR-VVSNFIAQAIRGEP  231 (297)
Q Consensus       154 ~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~ivrp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~  231 (297)
                                    .+......|..+|...+.+.+.++.+ .+++++.+.||.+-.+........ .-+.....+....+
T Consensus       161 --------------~~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  226 (259)
T d1oaaa_         161 --------------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS  226 (259)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred             --------------CCCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCC
Confidence                          23344578999999999999988866 479999999988876431000000 00011111111000


Q ss_pred             eEEecCCceeEeeeeHHHHHHHHHHHHhcCC
Q 022414          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       232 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  262 (297)
                      .         ..+..++|+|++++++++...
T Consensus       227 ~---------~r~~~p~evA~~i~~ll~~~s  248 (259)
T d1oaaa_         227 D---------GALVDCGTSAQKLLGLLQKDT  248 (259)
T ss_dssp             T---------TCSBCHHHHHHHHHHHHHHCC
T ss_pred             C---------CCCCCHHHHHHHHHHHhhhcc
Confidence            0         124678999999999997643

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=3.2e-16  Score=124.50  Aligned_cols=185  Identities=16%  Similarity=0.080  Sum_probs=128.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc--------------ccC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP--------------LLI   96 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--------------~~~   96 (297)
                      ++|+|+||||+|.||+++++.|.++| ++|.++++.......         .......|..+.              ...
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G-~~V~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARN-WWVASIDVVENEEAS---------ASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESSCCTTSS---------EEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCcccccc---------ccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            37999999999999999999999999 999999886432211         111222222211              122


Q ss_pred             CcCEEEEccCCCCCcc-----cccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 022414           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~  168 (297)
                      ++|++||+||......     ..++.+..+++|+.+...+.+++.+.   +-++|++||....                .
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~----------------~  134 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL----------------D  134 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG----------------S
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHc----------------C
Confidence            5899999998543221     12335567899999999988888653   2379999998764                2


Q ss_pred             CCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEe
Q 022414          169 PIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (297)
Q Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      +......|+.+|.+.+.+.+.++.+     .+++++.+.||.+..|.            .+......         ..-.
T Consensus       135 ~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~------------~~~~~~~~---------~~~~  193 (236)
T d1dhra_         135 GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM------------NRKSMPEA---------DFSS  193 (236)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH------------HHHHSTTS---------CGGG
T ss_pred             CccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc------------chhhCccc---------hhhc
Confidence            3333467999999999999998865     36999999998886532            11111111         1124


Q ss_pred             eeeHHHHHHHHHHHHhcCC
Q 022414          244 FCYVSDMVDGLIRLMEGEN  262 (297)
Q Consensus       244 ~i~v~Dva~~~~~~~~~~~  262 (297)
                      ++..+++|+.++.++....
T Consensus       194 ~~~pe~va~~~~~l~s~~~  212 (236)
T d1dhra_         194 WTPLEFLVETFHDWITGNK  212 (236)
T ss_dssp             SEEHHHHHHHHHHHHTTTT
T ss_pred             CCCHHHHHHHHHHHhCCCc
Confidence            6789999999999987653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1e-15  Score=124.00  Aligned_cols=198  Identities=12%  Similarity=0.085  Sum_probs=137.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhh--cCCCceEEEecccCCcc------------c
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPL------------L   95 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~------------~   95 (297)
                      .++|+++|||||+.||+++++.|+++| ++|++++|+.....+...+.  .....+..+.+|..+..            .
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G-~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMG-AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            678999999999999999999999999 99999999654333322222  12345667778877642            2


Q ss_pred             CCcCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHH----HHcCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 022414           96 IEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNV  167 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~  167 (297)
                      ...|+++|+||........    ++....+++|+.++..+.+.+    ++.+-++|++||...+                
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~----------------  154 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK----------------  154 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT----------------
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc----------------
Confidence            2589999999876544322    334567889999888777766    3344588888887753                


Q ss_pred             CCCCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeE
Q 022414          168 NPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (297)
Q Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                      .+......|+.+|.+.+.+.+.++.+     .++++..+.||.|-.+            +......+.         ...
T Consensus       155 ~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~------------~~~~~~~~~---------~~~  213 (269)
T d1xu9a_         155 VAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE------------TAMKAVSGI---------VHM  213 (269)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH------------HHHHHSCGG---------GGG
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc------------HHHHhccCC---------ccc
Confidence            23334468999999999999888765     2488889999877542            112211111         111


Q ss_pred             eeeeHHHHHHHHHHHHhcCCCcc
Q 022414          243 SFCYVSDMVDGLIRLMEGENTGP  265 (297)
Q Consensus       243 ~~i~v~Dva~~~~~~~~~~~~~~  265 (297)
                      .....+++|+.++..+.......
T Consensus       214 ~~~~~e~~a~~i~~~~~~~~~~i  236 (269)
T d1xu9a_         214 QAAPKEECALEIIKGGALRQEEV  236 (269)
T ss_dssp             GCBCHHHHHHHHHHHHHTTCSEE
T ss_pred             cCCCHHHHHHHHHHHhhcCCCEE
Confidence            24567899998888777655443

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.67  E-value=8.2e-16  Score=122.10  Aligned_cols=183  Identities=17%  Similarity=0.143  Sum_probs=125.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc--------------ccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP--------------LLIE   97 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--------------~~~~   97 (297)
                      ..||+||||+|.||+++++.|+++| ++|++++|+.....+         ......+|..+.              ...+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G-~~V~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNG-YTVLNIDLSANDQAD---------SNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEESSCCTTSS---------EEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCchhccc---------ccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            3689999999999999999999999 999999997543211         112222333221              1235


Q ss_pred             cCEEEEccCCCCCcc-c----ccChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 022414           98 VDQIYHLACPASPIF-Y----KYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~-~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  169 (297)
                      +|++|||||...... .    .+..+..+++|+.++..+++++.+.   +.++|++||...+                .+
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~----------------~~  135 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM----------------GP  135 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG----------------SC
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhc----------------CC
Confidence            899999999643322 1    1234456889999998888888663   2379999998754                23


Q ss_pred             CCCCChHHHhHHHHHHHHHHHHHH-----hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEee
Q 022414          170 IGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (297)
Q Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                      ......|..+|.+.+.+.+.++.+     .++++..+.|+.+-.+            +.+.......         ...+
T Consensus       136 ~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~------------~~~~~~~~~~---------~~~~  194 (235)
T d1ooea_         136 TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP------------MNRKWMPNAD---------HSSW  194 (235)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH------------HHHHHSTTCC---------GGGC
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc------------chhhhCcCCc---------cccC
Confidence            334578999999999999998765     3578888999877432            1222222111         1246


Q ss_pred             eeHHHHHHHHHHHHhcC
Q 022414          245 CYVSDMVDGLIRLMEGE  261 (297)
Q Consensus       245 i~v~Dva~~~~~~~~~~  261 (297)
                      +..+|+++.++.++..+
T Consensus       195 ~~~~~va~~~~~~l~~~  211 (235)
T d1ooea_         195 TPLSFISEHLLKWTTET  211 (235)
T ss_dssp             BCHHHHHHHHHHHHHCG
T ss_pred             CCHHHHHHHHHHHhcCc
Confidence            78999999988766553

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.65  E-value=3e-15  Score=119.35  Aligned_cols=202  Identities=17%  Similarity=0.117  Sum_probs=135.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----------ccCCcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----------LLIEVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----------~~~~~d~  100 (297)
                      +|+++||||++.||+++++.|+++| ++|++.+|+...           .+....++|+.+.           .....+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~G-a~V~i~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   68 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARG-YRVVVLDLRREG-----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFA   68 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEESSCCS-----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCccc-----------ccceEeeccccchhhhHHHHHhhhccccccc
Confidence            5899999999999999999999999 999999986432           1344556666643           1123445


Q ss_pred             EEEccCCCCCcc--------cccChhhhHHHhHHHHHHHHHHHHHc----------CC-eEEEEecceeecCCCCCCCCC
Q 022414          101 IYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAKRV----------GA-RILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus       101 vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~-r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                      ++++++......        ..+.....++.|..+...+.+.+...          +. ++|++||...+.         
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~---------  139 (241)
T d1uaya_          69 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE---------  139 (241)
T ss_dssp             EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH---------
T ss_pred             hhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc---------
Confidence            555554322111        12234556788888888777766432          23 799999987642         


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
                             +......|+.+|.+.+.+.+.++.+   ++++++.+.||.+..+.....    ............++  .   
T Consensus       140 -------~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~----~~~~~~~~~~~~~~--~---  203 (241)
T d1uaya_         140 -------GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL----PEKAKASLAAQVPF--P---  203 (241)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS----CHHHHHHHHTTCCS--S---
T ss_pred             -------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh----hhhHHHHHHhcCCC--C---
Confidence                   2333467999999999999998876   479999999998866532211    12222333333221  0   


Q ss_pred             ceeEeeeeHHHHHHHHHHHHhcCC--CccEEecCCCc
Q 022414          239 TQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGE  273 (297)
Q Consensus       239 ~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~  273 (297)
                         ..+..++|+|++++++++...  +..+.+.+|-.
T Consensus       204 ---~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         204 ---PRLGRPEEYAALVLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             ---CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             ---CCCcCHHHHHHHHHHHHhCCCCCCCEEEECCccc
Confidence               135678999999999998654  44677777643

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.7e-15  Score=121.91  Aligned_cols=176  Identities=17%  Similarity=0.064  Sum_probs=120.4

Q ss_pred             CCEE-EEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcc------------cC
Q 022414           32 NMRI-LVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL------------LI   96 (297)
Q Consensus        32 ~~~i-lItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~------------~~   96 (297)
                      +|+| +||||++.||.++++.|++. | ..|++.+|+....++...++.. ..++.++++|+++..            ..
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSS-SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            5665 89999999999999999986 7 9999999976543333332221 246889999999862            23


Q ss_pred             CcCEEEEccCCCCCcccc----cChhhhHHHhHHHHHHHHHHHHHc---CCeEEEEecceeecCC-CC----------CC
Q 022414           97 EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDP-LV----------HP  158 (297)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~---~~r~v~~Ss~~~~~~~-~~----------~~  158 (297)
                      ++|++|||||........    ++.+..+++|+.++..+++.+...   +-++|.+||....... ..          ..
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~  160 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET  160 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccc
Confidence            699999999976543332    335567899999999999998553   1279999986542100 00          00


Q ss_pred             CCC---------------CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH-------hCCcEEEEeeccccCC
Q 022414          159 QDE---------------SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ-------HGIEIRIARIFNTYGP  209 (297)
Q Consensus       159 ~~e---------------~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~ivrp~~v~G~  209 (297)
                      ..+               .. ....+..+...|..+|.....+.+.++.+       .++.+..+.||+|-.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~  232 (275)
T d1wmaa1         161 ITEEELVGLMNKFVEDTKKG-VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD  232 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHTT-CTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred             cchhhhccccccchhccccc-ccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence            000               00 00023345578999999998887665543       2799999999988654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.63  E-value=3.7e-15  Score=120.79  Aligned_cols=219  Identities=12%  Similarity=0.039  Sum_probs=137.1

Q ss_pred             cCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc-------------
Q 022414           30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-------------   94 (297)
                      .++|+++||||+|  .||.++++.|.++| .+|++.+|+..+..+.+.+.+. .+...+++|+.+..             
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~G-a~Vil~~~~~~~~~~~~~~~~~-~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQG-AQLVLTGFDRLRLIQRITDRLP-AKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTT-CEEEEEECSCHHHHHHHHTTSS-SCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcC-CEEEEEeCChHHHHHHHHHHcC-CceeeEeeecccccccccccchhhhcc
Confidence            4689999999765  59999999999999 9999999865443333433332 35677889998751             


Q ss_pred             --cCCcCEEEEccCCCCCccc---------ccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEecceeecCCCCCCCCC
Q 022414           95 --LIEVDQIYHLACPASPIFY---------KYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDE  161 (297)
Q Consensus        95 --~~~~d~vi~~a~~~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss~~~~~~~~~~~~~e  161 (297)
                        ....|+++|++|.......         .......+..|........+.+.....  ..+.++|....          
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~----------  151 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS----------  151 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS----------
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc----------
Confidence              2358999999996542221         111223445555555555555544332  34444443322          


Q ss_pred             CCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCC--------CCCChhHHHHHHHHHHcCC
Q 022414          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRM--------NIDDGRVVSNFIAQAIRGE  230 (297)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~--------~~~~~~~~~~~~~~~~~~~  230 (297)
                            ...+....|+.+|.+.+.+.+.++.+   .+++++.+.||.+-.+..        ..........+........
T Consensus       152 ------~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (268)
T d2h7ma1         152 ------RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA  225 (268)
T ss_dssp             ------SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC
T ss_pred             ------ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcC
Confidence                  12223467999999999999988865   479999999998865321        0000111222222333322


Q ss_pred             CeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCcc
Q 022414          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGEF  274 (297)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~~  274 (297)
                      ++.        +.+..++|+|+++.+++....   .| .+.+.+|...
T Consensus       226 pl~--------rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         226 PIG--------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             TTC--------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             CCC--------CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence            221        235568999999999997543   44 5788777544

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.63  E-value=3.2e-14  Score=115.53  Aligned_cols=215  Identities=12%  Similarity=-0.001  Sum_probs=132.9

Q ss_pred             cCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-CCCceEEEecccCCcc------------
Q 022414           30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPL------------   94 (297)
Q Consensus        30 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~------------   94 (297)
                      .++|++|||||+|  .||.++++.|+++| ++|++.+|+.. ..+...++. ......+..+|+++..            
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~G-a~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQG-ATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTT-CEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCC-CEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            4689999999987  79999999999999 99999999742 222222221 1235567788888652            


Q ss_pred             cCCcCEEEEccCCCCCccccc----ChhhhHH----HhHHHHHHHHHHHHHcCC--e-EEEEecceeecCCCCCCCCCCC
Q 022414           95 LIEVDQIYHLACPASPIFYKY----NPVKTIK----TNVIGTLNMLGLAKRVGA--R-ILLTSTSEVYGDPLVHPQDESY  163 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~~~~----~~~~~~~----~n~~~~~~l~~~~~~~~~--r-~v~~Ss~~~~~~~~~~~~~e~~  163 (297)
                      ...+|+++|++|.........    .....+.    .+............+...  . ++.+|+.....           
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-----------  149 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----------  149 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc-----------
Confidence            236999999999765433222    1112222    222233333333333222  3 45555544331           


Q ss_pred             CCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCce
Q 022414          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (297)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                           +......|+.+|...+.+.+.++.+   .+++++.+.||.+..+........  ...........++        
T Consensus       150 -----~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~--------  214 (274)
T d2pd4a1         150 -----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF--RMILKWNEINAPL--------  214 (274)
T ss_dssp             -----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH--HHHHHHHHHHSTT--------
T ss_pred             -----ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch--HHHHHHHhhhhhc--------
Confidence                 2233357999999999999887765   479999999998877653221110  1111111121111        


Q ss_pred             eEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCc
Q 022414          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (297)
Q Consensus       241 ~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~  273 (297)
                       ..+..++|+|+++++++....   +| .+.+.+|..
T Consensus       215 -~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         215 -RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             -SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -cCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChh
Confidence             135789999999999998654   44 677777643

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.62  E-value=1.6e-14  Score=117.92  Aligned_cols=212  Identities=16%  Similarity=0.076  Sum_probs=136.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecc-----------------cCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHD-----------------VTE   92 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D-----------------l~~   92 (297)
                      -.++||||++.||+++++.|+++| .+|++.+++.....+.+.+.+   .......+++|                 +++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~G-a~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEG-YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            357999999999999999999999 999988876443333222221   12244455555                 332


Q ss_pred             c------------ccCCcCEEEEccCCCCCcccccC------------------hhhhHHHhHHHHHHHHHHHHHc----
Q 022414           93 P------------LLIEVDQIYHLACPASPIFYKYN------------------PVKTIKTNVIGTLNMLGLAKRV----  138 (297)
Q Consensus        93 ~------------~~~~~d~vi~~a~~~~~~~~~~~------------------~~~~~~~n~~~~~~l~~~~~~~----  138 (297)
                      .            ...++|++|||||...+....+.                  ....+.+|+.+...+.+++.+.    
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            2            12369999999997654332111                  1125678888888887776431    


Q ss_pred             -----C-C-eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccC
Q 022414          139 -----G-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYG  208 (297)
Q Consensus       139 -----~-~-r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G  208 (297)
                           + . +++.++|....                .+......|..+|...+.+.+.++.+   .+++++.+.||.+-.
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~----------------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~  225 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTN----------------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL  225 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTT----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred             HHHhcCCCCccccccccccc----------------CCccceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence                 2 2 56666665532                23333467999999999999998876   479999999986322


Q ss_pred             CCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCccc
Q 022414          209 PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGEFT  275 (297)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~~s  275 (297)
                      ..      ..............++  .      ..+...+|+|+++++++....   +| .+.+.+|..++
T Consensus       226 ~~------~~~~~~~~~~~~~~pl--~------~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         226 VD------DMPPAVWEGHRSKVPL--Y------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             GG------GSCHHHHHHHHTTCTT--T------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cc------cCCHHHHHHHHhcCCC--C------CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            11      1223344444443322  0      135689999999999997543   44 67888876553

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.60  E-value=4.5e-14  Score=115.98  Aligned_cols=218  Identities=11%  Similarity=0.003  Sum_probs=138.2

Q ss_pred             cccCCCEEEEEcCCc--hhHHHHHHHHHhcCCCeEEEEecCCCCCc---------cchhhhcC---CC---ceEEEeccc
Q 022414           28 FFQSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSK---------DNLRKWIG---HP---RFELIRHDV   90 (297)
Q Consensus        28 ~~~~~~~ilItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~---------~~~~~~~~---~~---~~~~~~~Dl   90 (297)
                      ++.++|+++||||+|  .||+++++.|+++| .+|++.+|+.....         ........   ..   .+..+..++
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~G-a~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAG-AEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTT-CEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCC-CEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            566799999999987  89999999999999 99999988532100         00000000   01   122222222


Q ss_pred             CCc------------------------------ccCCcCEEEEccCCCCC--cc----cccChhhhHHHhHHHHHHHHHH
Q 022414           91 TEP------------------------------LLIEVDQIYHLACPASP--IF----YKYNPVKTIKTNVIGTLNMLGL  134 (297)
Q Consensus        91 ~~~------------------------------~~~~~d~vi~~a~~~~~--~~----~~~~~~~~~~~n~~~~~~l~~~  134 (297)
                      .+.                              ...++|++||+||....  ..    ..+++...+++|+.+...++++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  162 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence            110                              12369999999986432  11    2334667889999999999988


Q ss_pred             HHHcCC---eEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHH----HhCCcEEEEeecccc
Q 022414          135 AKRVGA---RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR----QHGIEIRIARIFNTY  207 (297)
Q Consensus       135 ~~~~~~---r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~----~~~~~~~ivrp~~v~  207 (297)
                      +.....   +.+.+++.....               ........|..+|...+.+.+.+..    +.+++++.+.||.+.
T Consensus       163 ~~~~~~~~g~~~~~~~~~~~~---------------~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~  227 (297)
T d1d7oa_         163 FLPIMNPGGASISLTYIASER---------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG  227 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTS---------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred             HHHHhhcCCcceeeeehhhcc---------------cccccccceecccccccccccccchhccccceEEeccccccccc
Confidence            866433   355555544321               1122335699999988887765543    358999999999998


Q ss_pred             CCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCC
Q 022414          208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (297)
Q Consensus       208 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~  272 (297)
                      .+.....  .....+........++         ..+...+|+|+++++++....   +| .+.+.+|-
T Consensus       228 T~~~~~~--~~~~~~~~~~~~~~Pl---------gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         228 SRAAKAI--GFIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             CCCSSCC--SHHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             chhhhhc--cCCHHHHHHHHhCCCC---------CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            7764321  2334444444443333         135689999999999997543   44 67777763

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.60  E-value=3.2e-14  Score=114.97  Aligned_cols=210  Identities=16%  Similarity=0.122  Sum_probs=133.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc---CCCceEEEecccCCc----------------c
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEP----------------L   94 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~----------------~   94 (297)
                      .++||||++.||+++++.|+++| .+|++++|+.....+.+.+.+   ........+.|..+.                .
T Consensus         3 vAlVTGas~GIG~aia~~la~~G-~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQG-FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            58999999999999999999999 999999997544333322221   123555666555432                1


Q ss_pred             cCCcCEEEEccCCCCCcccc---------------cChhhhHHHhHHHHHHHHHHHHHcC---------C-eEEEEecce
Q 022414           95 LIEVDQIYHLACPASPIFYK---------------YNPVKTIKTNVIGTLNMLGLAKRVG---------A-RILLTSTSE  149 (297)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~~~---------------~~~~~~~~~n~~~~~~l~~~~~~~~---------~-r~v~~Ss~~  149 (297)
                      ..++|++||+||...+....               ......+..|..............-         . .++.+|+..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            23699999999976543211               1122233445555444444443321         1 345555544


Q ss_pred             eecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHH
Q 022414          150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA  226 (297)
Q Consensus       150 ~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~  226 (297)
                      ..                .+......|..+|...+.+.+.++.+   .+++++.+.||.+..+...+      ......+
T Consensus       162 ~~----------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~------~~~~~~~  219 (266)
T d1mxha_         162 TD----------------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP------QETQEEY  219 (266)
T ss_dssp             GG----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC------HHHHHHH
T ss_pred             cc----------------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC------HHHHHHH
Confidence            32                23333467999999999999988875   47999999999887654322      2233333


Q ss_pred             HcCCCeEEecCCceeEeeeeHHHHHHHHHHHHhcCC---Cc-cEEecCCCcc
Q 022414          227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGEF  274 (297)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~~~i~~~~~~  274 (297)
                      .+..++   +     +.+..++|+|+++++++....   +| .+.+.+|-.+
T Consensus       220 ~~~~pl---~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         220 RRKVPL---G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HTTCTT---T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhcCCC---C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            443322   1     124678999999999997653   55 6888876543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.46  E-value=1.2e-12  Score=108.79  Aligned_cols=161  Identities=8%  Similarity=-0.006  Sum_probs=105.2

Q ss_pred             CCEEEEEc--CCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc-------h-hhhc-C----CCceEEEec--------
Q 022414           32 NMRILVTG--GAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-------L-RKWI-G----HPRFELIRH--------   88 (297)
Q Consensus        32 ~~~ilItG--atG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-------~-~~~~-~----~~~~~~~~~--------   88 (297)
                      +|.+||||  ++..||+++++.|.++| .+|++..+........       . .... .    ........+        
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~G-A~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRN-VKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTT-CEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcC-CEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            68899999  55799999999999999 9999987753211100       0 0000 0    001112222        


Q ss_pred             ------------ccCCc------------ccCCcCEEEEccCCCCCcc------cccChhhhHHHhHHHHHHHHHHHHHc
Q 022414           89 ------------DVTEP------------LLIEVDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKRV  138 (297)
Q Consensus        89 ------------Dl~~~------------~~~~~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~  138 (297)
                                  |+.+.            ...++|++||++|......      ..+++...+++|+.+...+++++.+.
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                        22222            1136999999998654211      23446677889999888888888664


Q ss_pred             C---CeEEEEecceeecCCCCCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHHHH----hCCcEEEEeeccccC
Q 022414          139 G---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYG  208 (297)
Q Consensus       139 ~---~r~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ivrp~~v~G  208 (297)
                      =   -++|.+||......               .+.....|+.+|...+.+.+.++.+    ++++++.+.||.+-.
T Consensus       161 m~~~GsIv~iss~~~~~~---------------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKV---------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEEEEEEECGGGTSC---------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             cccccccccceeehhccc---------------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence            1   26888887664311               1112356999999999999887754    589999999987754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.45  E-value=4.9e-13  Score=107.29  Aligned_cols=223  Identities=13%  Similarity=0.038  Sum_probs=120.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~  111 (297)
                      ||.|+||||++.||+++++.|.++| ++|++++|+.......+...   ........|.........|+++|+||.... 
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~G-a~V~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~-   75 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAG-HQIVGIDIRDAEVIADLSTA---EGRKQAIADVLAKCSKGMDGLVLCAGLGPQ-   75 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSSSSEECCTTSH---HHHHHHHHHHHTTCTTCCSEEEECCCCCTT-
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECChHHHHHHhcCH---HHHHHHHHHHHHHhCCCCcEEEEcCCCCCc-
Confidence            5778999999999999999999999 99999998643322211110   011111122323334568999999986543 


Q ss_pred             ccccChhhhHHHhHHHHHHHHHHH----HHcCC-eEEEEecceeecCC-CCCCCCCC-----------CCCCCCCCCCCC
Q 022414          112 FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDP-LVHPQDES-----------YWGNVNPIGVRS  174 (297)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~v~~Ss~~~~~~~-~~~~~~e~-----------~~~~~~~~~~~~  174 (297)
                        .........+|..+...+.+..    .+... ....+++....... ...+....           ............
T Consensus        76 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~  153 (257)
T d1fjha_          76 --TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNL  153 (257)
T ss_dssp             --CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHH
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchH
Confidence              3344555667777666665544    22333 34444443221100 00000000           000000111224


Q ss_pred             hHHHhHHHHHHHHHHHHHH---hCCcEEEEeeccccCCCCCCCChhHHHHHHHHHHcCCCeEEecCCceeEeeeeHHHHH
Q 022414          175 CYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (297)
Q Consensus       175 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ivrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  251 (297)
                      .|..+|.+.+.+.+.++.+   .+++++.+.||.+-.+.......  -........+..        .....+...+|+|
T Consensus       154 ~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~~~~~--------~PlgR~g~p~eva  223 (257)
T d1fjha_         154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--DPRYGESIAKFV--------PPMGRRAEPSEMA  223 (257)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CC--------CSTTSCCCTHHHH
T ss_pred             HHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcC--CHHHHHHHHhcC--------CCCCCCcCHHHHH
Confidence            5999999999999888765   47999999999887654211000  001111111110        0112367889999


Q ss_pred             HHHHHHHhcCC---Cc-cEEecCC
Q 022414          252 DGLIRLMEGEN---TG-PINIGNP  271 (297)
Q Consensus       252 ~~~~~~~~~~~---~~-~~~i~~~  271 (297)
                      +++.+++....   +| .+.+.+|
T Consensus       224 ~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         224 SVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhCCccCceEEeCCC
Confidence            99999997543   44 5677665

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.09  E-value=1e-11  Score=94.70  Aligned_cols=80  Identities=9%  Similarity=0.105  Sum_probs=60.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEE
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIY  102 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi  102 (297)
                      .+..+|+|+||||+|.||+++++.|.++| .+|++++|+.....+....+.....+....+|+.+.     ...++|+||
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEG-AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhc-cchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            34578999999999999999999999999 999999997544333222222223455667777765     345799999


Q ss_pred             EccCCC
Q 022414          103 HLACPA  108 (297)
Q Consensus       103 ~~a~~~  108 (297)
                      |+||..
T Consensus        98 n~Ag~g  103 (191)
T d1luaa1          98 TAGAIG  103 (191)
T ss_dssp             ECCCTT
T ss_pred             ecCccc
Confidence            999864

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.39  E-value=3.6e-06  Score=59.88  Aligned_cols=106  Identities=11%  Similarity=0.108  Sum_probs=73.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCC-cc----chhhhcC--CCceEEE-ecccCCcccCCcCEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGS-KD----NLRKWIG--HPRFELI-RHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~-~~----~~~~~~~--~~~~~~~-~~Dl~~~~~~~~d~vi~  103 (297)
                      |||.|+||+|.+|..++..|..++. .++.++++..... .+    ++.....  ....+.. ..+-....+.++|+|+.
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVi   80 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEE
Confidence            7999999999999999999999884 5899988853211 11    1221111  1223322 22212235678999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      +||...  ....+..+.+..|..-.+.+++.+.+.+-
T Consensus        81 tAG~~~--~~g~sR~dl~~~Na~iv~~i~~~i~~~~~  115 (145)
T d1hyea1          81 TSGVPR--KEGMSRMDLAKTNAKIVGKYAKKIAEICD  115 (145)
T ss_dssp             CCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             eccccc--CCCCChhhhhhhhHHHHHHHHHHHhccCC
Confidence            998543  34456778889999999999999988764

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.38  E-value=8.4e-07  Score=63.26  Aligned_cols=97  Identities=14%  Similarity=0.106  Sum_probs=59.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC---CCeEEEEecCCCCCccchhhhcCCCceEEEecccCC-cccCCcCEEEEccCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE---KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLACP  107 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g---~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~d~vi~~a~~  107 (297)
                      |+||.|.||||++|+.+++.|+++.   ..+++++.++....... .  ......  ...++.+ ..+.++|++|.+++ 
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~-~--~~~~~~--~~~~~~~~~~~~~~DivF~a~~-   74 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAP-S--FGGTTG--TLQDAFDLEALKALDIIVTCQG-   74 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCC-G--GGTCCC--BCEETTCHHHHHTCSEEEECSC-
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccc-c--ccCCce--eeecccchhhhhcCcEEEEecC-
Confidence            5799999999999999999888763   24666666543322111 0  111111  1112222 24568999999873 


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceee
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~  151 (297)
                                       -.....+...+.+.|++.+.++..+.|
T Consensus        75 -----------------~~~s~~~~~~~~~~g~~~~VID~Ss~f  101 (146)
T d1t4ba1          75 -----------------GDYTNEIYPKLRESGWQGYWIDAASSL  101 (146)
T ss_dssp             -----------------HHHHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred             -----------------chHHHHhhHHHHhcCCCeecccCCccc
Confidence                             123567777777888875555554444

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.37  E-value=1.7e-06  Score=61.74  Aligned_cols=106  Identities=12%  Similarity=0.112  Sum_probs=69.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhh-cCCCceEEEecccCCcccCCcCEEEEc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKW-IGHPRFELIRHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~-~~~~~~~~~~~Dl~~~~~~~~d~vi~~  104 (297)
                      ++.|||.|.|+ |++|..++..|..+|. .+++++++.......   ++... ...........|..  ++.++|+|+.+
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--~~~~adivvit   79 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--DCKDADLVVIT   79 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--GGTTCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH--HhccccEEEEe
Confidence            45689999995 9999999999999874 689999986432111   11110 11123344455553  46789999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      +|...  ....+..+.+..|....+.+++.+.+.+-
T Consensus        80 ag~~~--~~g~~r~~l~~~N~~i~~~~~~~i~~~~p  113 (146)
T d1ez4a1          80 AGAPQ--KPGESRLDLVNKNLNILSSIVKPVVDSGF  113 (146)
T ss_dssp             CCC------------CHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccccc--CCCCCHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            98543  33455667788999999999999999876

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.33  E-value=2.6e-06  Score=60.66  Aligned_cols=112  Identities=16%  Similarity=0.052  Sum_probs=72.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHh-cC-CCeEEEEecCCCCCccchhhhcC---CCceEEEecccCCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLME-NE-KNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~-~g-~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      |||.|+|++|.+|++++..|.. .+ ..++.+++..+ ........+..   ......+..+-....+.+.|+||.+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~   79 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCc
Confidence            8999999999999999988754 33 26888888642 11111111111   1122222211112246789999999986


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      ..  ....+..+.+..|..-.+.+++.+.+.+-  .++.+|-
T Consensus        80 ~~--k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          80 RR--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             CC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             cC--CCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence            43  34557778889999999999999998875  4555443

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.31  E-value=1.5e-06  Score=64.53  Aligned_cols=101  Identities=12%  Similarity=0.155  Sum_probs=62.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC-CCC-ccchhh---hc-CCCceEEEecccCCcccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGS-KDNLRK---WI-GHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~-~~~~~~---~~-~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |+||.|.|||||+|++|++.|.++...++..+.... ... ......   .+ ..........+..+....++|++|.+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~al   80 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLAT   80 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECS
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeeccc
Confidence            689999999999999999999998647776554322 111 111111   11 112222323333333456789999876


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                      ..                  .....+...+.+.++++|=.|+..-
T Consensus        81 p~------------------~~s~~~~~~~~~~~~~vIDlSadfR  107 (179)
T d2g17a1          81 AH------------------EVSHDLAPQFLQAGCVVFDLSGAFR  107 (179)
T ss_dssp             CH------------------HHHHHHHHHHHHTTCEEEECSSTTS
T ss_pred             cc------------------hhHHHHhhhhhhcCceeeccccccc
Confidence            31                  1344566677778889988888653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.30  E-value=4.4e-06  Score=59.39  Aligned_cols=108  Identities=16%  Similarity=0.091  Sum_probs=73.3

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCC----CceE-EEecccCCcccCCcCEEEEccCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFE-LIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~----~~~~-~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ||.|+||+|.+|++++..|..++. .++.+++....   ......+..    .... .+..+-....+.++|+|+.+||.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~---~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~   78 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT---PGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV   78 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH---HHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc---chhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCc
Confidence            799999999999999999998885 67888887432   111111111    1111 11111111245789999999985


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ..  ....+..+.++.|....+.+++.+++.+-  .++.+|
T Consensus        79 ~~--~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          79 PR--KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CC--CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            43  34556778889999999999999999875  444444

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.29  E-value=4.2e-06  Score=59.54  Aligned_cols=95  Identities=17%  Similarity=0.170  Sum_probs=61.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC--CCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      .|+|.|.||||++|+++++.|.+++  ..++..+..+....+. ..    ...-+....++......++|++|.+++.  
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~-i~----~~~~~~~~~~~~~~~~~~~d~vf~a~p~--   74 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR-MG----FAESSLRVGDVDSFDFSSVGLAFFAAAA--   74 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE-EE----ETTEEEECEEGGGCCGGGCSEEEECSCH--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcc-ee----eccccchhccchhhhhccceEEEecCCc--
Confidence            4899999999999999999997654  2577766543322211 10    1122333344445556789999987631  


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecce
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~  149 (297)
                                      .....+...+.+.|+++|=.|+.+
T Consensus        75 ----------------~~s~~~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          75 ----------------EVSRAHAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ----------------chhhhhccccccCCceEEeechhh
Confidence                            134566666778888888777754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.26  E-value=3.4e-06  Score=59.29  Aligned_cols=67  Identities=22%  Similarity=0.284  Sum_probs=50.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~a  105 (297)
                      |+|+|+|+ |.+|+.+++.|.+.| ++|+++++++    +.........+...+.+|.++..      ..+.|.++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g-~~v~vid~d~----~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKG-HDIVLIDIDK----DICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCH----HHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCC-CCcceecCCh----hhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            89999997 999999999999999 9999999853    22222222236788999998863      34688888654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.25  E-value=5.4e-06  Score=59.70  Aligned_cols=113  Identities=13%  Similarity=0.040  Sum_probs=74.0

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc---chhhhc--CCCceEEEecccCCcccCCcCEE
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKWI--GHPRFELIRHDVTEPLLIEVDQI  101 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---~~~~~~--~~~~~~~~~~Dl~~~~~~~~d~v  101 (297)
                      .+..+.+||.|.|+ |.+|+.++..|...+..++.+++.+......   .+....  ..........+..+.+..+.|+|
T Consensus         2 ~~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiV   80 (154)
T d1pzga1           2 ALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCV   80 (154)
T ss_dssp             CCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEE
T ss_pred             ccccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeE
Confidence            34556799999997 9999999998888886688888875432111   111110  01111121122222345789999


Q ss_pred             EEccCCCCCcc---cccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          102 YHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       102 i~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      +.++|......   ...+..+.+..|......+++.+.+.+-
T Consensus        81 vitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p  122 (154)
T d1pzga1          81 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCP  122 (154)
T ss_dssp             EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCT
T ss_pred             EEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCC
Confidence            99998654322   1235667788999999999999999886

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.17  E-value=1.5e-05  Score=56.98  Aligned_cols=112  Identities=15%  Similarity=0.210  Sum_probs=76.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccc---hhhh--cCCCceEEEecccCCcccCCcCEEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKW--IGHPRFELIRHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~---~~~~--~~~~~~~~~~~Dl~~~~~~~~d~vi~  103 (297)
                      ..++||.|+|+ |++|..++..|..++. .++.++++........   +...  ...........|.  ..+.++|+|+.
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~--~~l~daDvvvi   80 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY--DDCRDADLVVI   80 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG--GGTTTCSEEEE
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH--HHhccceeEEE
Confidence            34689999997 9999999999999874 5899998754321111   1111  1112344444444  35678999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ++|...  .......+.+..|..-.+.+++.+++.+-  .++.+|
T Consensus        81 tag~~~--~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          81 CAGANQ--KPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             CCSCCC--CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             eccccc--ccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            998543  34456677888999999999999988765  455443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.12  E-value=2.9e-05  Score=54.99  Aligned_cols=104  Identities=13%  Similarity=0.037  Sum_probs=71.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhc-----CCCceEEEecccCCcccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI-----GHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      |||.|+|| |.+|+.++..|...+. .++.+++.+............     ..........+. ..++.++|+++.++|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~-~~~~~dadvvvitag   78 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND-YADTANSDIVIITAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC-GGGGTTCSEEEECCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC-HHHhcCCeEEEEEEe
Confidence            79999996 9999999999999874 589999986543221111110     011233332221 235689999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      ...  ....+..+.+..|..-.+.+++.+.+.+-
T Consensus        79 ~~~--~~g~~r~~l~~~N~~i~~~i~~~i~~~~p  110 (142)
T d1guza1          79 LPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSK  110 (142)
T ss_dssp             CCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             cCC--CCCCchHHHHHHHHHHHHHHHHHhhccCC
Confidence            543  33455677788999999999999988764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.03  E-value=2.5e-05  Score=55.18  Aligned_cols=103  Identities=16%  Similarity=0.071  Sum_probs=71.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccc---hhhhc-CCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKWI-GHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      |||.|.|+ |.+|..++..|+.++. .++.+++++.......   +.... ..........|.  .++.++|+|+.+||.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~--~~~~~adivvitag~   77 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY--ADLKGSDVVIVAAGV   77 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG--GGGTTCSEEEECCCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH--HHhcCCCEEEEeccc
Confidence            79999996 9999999999988874 5899988764321111   11100 112334444443  357889999999986


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      ..  .......+.+..|..-.+.+++.+.+.+-
T Consensus        78 ~~--~~g~~r~dl~~~N~~I~~~i~~~i~~~~p  108 (140)
T d1a5za1          78 PQ--KPGETRLQLLGRNARVMKEIARNVSKYAP  108 (140)
T ss_dssp             CC--CSSCCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             cc--CCCcchhhhhccccchHHHHHHHHHhcCC
Confidence            43  33455667788899999999999998875

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.02  E-value=3e-05  Score=55.83  Aligned_cols=112  Identities=15%  Similarity=0.097  Sum_probs=75.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhh--cCCCceEEEecccCCcccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKW--IGHPRFELIRHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~--~~~~~~~~~~~Dl~~~~~~~~d~vi~~  104 (297)
                      +.+||.|+|+ |.+|..++..|..+|. .++.+++++......   ++...  ...........|.  ..+.++|+|+..
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~--~~~~~adiVVit   95 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY--SVTANSKIVVVT   95 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG--GGGTTCSEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch--hhcccccEEEEe
Confidence            4689999996 9999999999999984 589998875322211   11110  1111222223333  356789999999


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      ||...  ....+..+.+..|..-.+.++..+++.+-  -++.+|-
T Consensus        96 Ag~~~--~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          96 AGVRQ--QEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             CSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             cCCcc--ccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            98653  33456677889999999999999999875  3454443

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=98.00  E-value=5e-06  Score=59.06  Aligned_cols=94  Identities=18%  Similarity=0.289  Sum_probs=54.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC---CeEEEEecCCCCCccchhhhcCCCceEEEecccCC-cccCCcCEEEEccCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK---NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLACPA  108 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~d~vi~~a~~~  108 (297)
                      |||.|.||||++|+++++.|+++..   .++..++.+....+.  ... .. ....+ .+..+ ....++|++|.|... 
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~--~~~-~~-~~~~~-~~~~~~~~~~~~DvvF~alp~-   74 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA--PNF-GK-DAGML-HDAFDIESLKQLDAVITCQGG-   74 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC--CCS-SS-CCCBC-EETTCHHHHTTCSEEEECSCH-
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc--ccc-CC-cceee-ecccchhhhccccEEEEecCc-
Confidence            7899999999999999999887531   355555443221111  111 11 11111 11122 234679999988731 


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCe--EEEEecce
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILLTSTSE  149 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r--~v~~Ss~~  149 (297)
                                       .....+...+.+.|.+  +|=.|+.+
T Consensus        75 -----------------~~s~~~~~~l~~~g~~~~VIDlSsdf  100 (147)
T d1mb4a1          75 -----------------SYTEKVYPALRQAGWKGYWIDAASTL  100 (147)
T ss_dssp             -----------------HHHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred             -----------------hHHHHHhHHHHHcCCceEEEeCCccc
Confidence                             1245677777788875  55556644

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.00  E-value=4.2e-05  Score=53.89  Aligned_cols=109  Identities=15%  Similarity=0.022  Sum_probs=75.1

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCc-c----chhhhc-CCCceEEEecccCCcccCCcCEEEEccC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSK-D----NLRKWI-GHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~-~----~~~~~~-~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ||.|+||+|.+|+.++..|..++. .++.+++....... +    ++.... ..........|.  ..+.++|+|+.+||
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~--~~~~~aDiVvitaG   79 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY--EDTAGSDVVVITAG   79 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG--GGGTTCSEEEECCC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH--HHhhhcCEEEEecc
Confidence            799999999999999999999984 47888876322111 1    111111 122334444443  34678999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      ...  ....+..+.++.|..-.+.+++.+++.+-  .++.+|
T Consensus        80 ~~~--~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          80 IPR--QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             CCC--CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             ccc--ccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            543  34466788899999999999999998875  344443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.99  E-value=7.1e-05  Score=52.81  Aligned_cols=103  Identities=15%  Similarity=0.128  Sum_probs=68.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhc---C-CCceEEEecccCCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI---G-HPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~---~-~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      +||.|+|+ |.+|..++..|+.++. .++.++++...........+.   . ........+|  ..++.++|+|+.+||.
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~~~adivvitag~   78 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD--YSDVKDCDVIVVTAGA   78 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C--GGGGTTCSEEEECCCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc--HHHhCCCceEEEeccc
Confidence            58999997 9999999999999884 589999987643322211111   1 1233333333  2356789999999985


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      ..  ....+..+.+..|..-...+++.+.+.+-
T Consensus        79 ~~--~~~~~r~~l~~~N~~i~~~i~~~i~~~~p  109 (142)
T d1y6ja1          79 NR--KPGETRLDLAKKNVMIAKEVTQNIMKYYN  109 (142)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cc--CcCcchhHHhhHHHHHHHHHHHHhhccCC
Confidence            43  33466778889999999999999999865

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.98  E-value=2.7e-05  Score=55.08  Aligned_cols=103  Identities=17%  Similarity=0.040  Sum_probs=70.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccc---hhhhc--CCCceEEE-ecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKWI--GHPRFELI-RHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~---~~~~~--~~~~~~~~-~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |||.|+|+ |.+|.+++..|..++. .++.+++++.......   +....  -....... ..|.  ..+.+.|+|+..|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~--~~~~~adiVvita   77 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY--SLLKGSEIIVVTA   77 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG--GGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH--HHhccccEEEEec
Confidence            89999996 9999999999998874 5899988754221111   11111  01112222 2343  4678899999999


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      |...  ....+..+.+..|..-...+++.+++.+-
T Consensus        78 g~~~--~~g~~r~~l~~~n~~i~~~i~~~i~~~~p  110 (142)
T d1ojua1          78 GLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAP  110 (142)
T ss_dssp             CCCC--CSSCCHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred             cccC--CCCCchHHHHHHhhHHHHHHHHHHHhhCC
Confidence            8543  34456777888999999999999998875

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.97  E-value=4.1e-05  Score=54.07  Aligned_cols=104  Identities=14%  Similarity=0.114  Sum_probs=71.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccc---hhhhc-CCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKWI-GHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      .||.|+|+ |.+|++++..|..++. .++.+++++.......   +.... ..........+.. ..+.++|+|+.+||.
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~-~~~~daDvVVitaG~   79 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAGP   79 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH-HHhhCCcEEEEeccc
Confidence            58999996 9999999999999984 5899988764322111   11110 0112333323222 246789999999986


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      ..  ....+..+.+..|..-.+.++..+++.+-
T Consensus        80 ~~--~~g~~R~dl~~~N~~i~~~i~~~i~~~~p  110 (143)
T d1llda1          80 RQ--KPGQSRLELVGATVNILKAIMPNLVKVAP  110 (143)
T ss_dssp             CC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             cc--CCCCchhhhhhhhHHHHHHHHHHHHhhCC
Confidence            43  34466678889999999999999988875

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.93  E-value=8.4e-05  Score=50.28  Aligned_cols=91  Identities=14%  Similarity=0.085  Sum_probs=68.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ...+++|+|.| .|-+|..-++.|++.| .+|++++...   .+.+..+....++.+.+.++.+..+.+.+.|+.+.+. 
T Consensus         9 ~l~~k~vlVvG-~G~va~~ka~~ll~~g-a~v~v~~~~~---~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~d-   82 (113)
T d1pjqa1           9 QLRDRDCLIVG-GGDVAERKARLLLEAG-ARLTVNALTF---IPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDD-   82 (113)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHTT-BEEEEEESSC---CHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSC-
T ss_pred             EeCCCEEEEEC-CCHHHHHHHHHHHHCC-CeEEEEeccC---ChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCCC-
Confidence            45789999999 6999999999999999 9999887632   3344445555678888888887778888988865421 


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCe
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR  141 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r  141 (297)
                                      -.....+.+.|++.++.
T Consensus        83 ----------------~~~n~~i~~~a~~~~il   99 (113)
T d1pjqa1          83 ----------------DTVNQRVSDAAESRRIF   99 (113)
T ss_dssp             ----------------HHHHHHHHHHHHHTTCE
T ss_pred             ----------------HHHHHHHHHHHHHcCCE
Confidence                            11234677888888863

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.93  E-value=4.7e-05  Score=55.74  Aligned_cols=113  Identities=15%  Similarity=0.086  Sum_probs=72.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC----C--eEEEEecCCCCCc-cchhh-h--cCCCceE-EEecccCCcccCCcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK----N--EVIVVDNYFTGSK-DNLRK-W--IGHPRFE-LIRHDVTEPLLIEVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~----~--~v~~~~r~~~~~~-~~~~~-~--~~~~~~~-~~~~Dl~~~~~~~~d~  100 (297)
                      ..||.|+||+|.||.+++-.|...+.    .  .+.+++....... +.+.. +  ...+... .+.++-....+.+.|+
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDv  103 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW  103 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCce
Confidence            46899999999999999999876421    2  4555554322111 11111 1  1112222 2223323346788999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-C--CeEEEEe
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-G--ARILLTS  146 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~--~r~v~~S  146 (297)
                      ||..+|..  .....+..+.+..|..-.+.+.+++.+. .  ++++.+|
T Consensus       104 Vvi~ag~~--rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         104 ALLIGAKP--RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             EEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             EEEeeccC--CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            99999754  4566778889999999999999999885 3  3565554

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.89  E-value=2e-05  Score=56.73  Aligned_cols=112  Identities=15%  Similarity=0.124  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCC------eEEEEecCCCCCccchhh------hcCCCceEEEec-ccCCcccCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYFTGSKDNLRK------WIGHPRFELIRH-DVTEPLLIE   97 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~------~v~~~~r~~~~~~~~~~~------~~~~~~~~~~~~-Dl~~~~~~~   97 (297)
                      ..|||.|+||+|++|++++..|...+..      ...++.-.  ...+....      .........+.. +-....+.+
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP--QAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKD   80 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccc--cchhhHcCchhhhhccccccccccccCCchhhhccc
Confidence            3589999999999999999999876521      11222221  11111111      111122332222 222346789


Q ss_pred             cCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcC---CeEEEEe
Q 022414           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTS  146 (297)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~v~~S  146 (297)
                      .|+|+.++|...  ....+..+.+..|..-.+.+.+.+.+..   +.++.+|
T Consensus        81 advViitaG~~~--~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          81 ADYALLVGAAPR--KAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccEEEeecCcCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            999999998643  4456677888999999999999998853   3555554

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.88  E-value=9.4e-05  Score=52.63  Aligned_cols=107  Identities=14%  Similarity=0.135  Sum_probs=70.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc---hhhh--cCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LRKW--IGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~---~~~~--~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      .+||.|.|+ |.+|+.++..|...+..++.++++........   +...  ...........+ ....+.+.|+|+.++|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~-~~~~~~~advvvitag   80 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN-TYDDLAGADVVIVTAG   80 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC-CGGGGTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc-cccccCCCcEEEEecc
Confidence            579999995 99999999988888877899998854322111   1111  011122222222 2235678999999998


Q ss_pred             CCCCcc-c--ccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          107 PASPIF-Y--KYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       107 ~~~~~~-~--~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      ...... .  ..+..+.+..|....+.+++.+++.+-
T Consensus        81 ~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p  117 (150)
T d1t2da1          81 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCP  117 (150)
T ss_dssp             CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCT
T ss_pred             cccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCC
Confidence            654322 1  224567789999999999999998875

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.86  E-value=5.1e-05  Score=52.46  Aligned_cols=73  Identities=19%  Similarity=0.265  Sum_probs=53.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIF  112 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~~  112 (297)
                      |||.|.|++|-+|+.|.+.+.+++ +++.+..-..              .         ...+.++|++|....+     
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~-~~l~~~id~~--------------~---------~~~~~~~DVvIDFS~p-----   51 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKG-HELVLKVDVN--------------G---------VEELDSPDVVIDFSSP-----   51 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEETT--------------E---------EEECSCCSEEEECSCG-----
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCC-CeEEEEECCC--------------c---------HHHhccCCEEEEecCH-----
Confidence            789999999999999999998888 7776532100              0         1123568999987632     


Q ss_pred             cccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414          113 YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus       113 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                                   .++..+++.|.+.++++|.=+|
T Consensus        52 -------------~~~~~~l~~~~~~~~p~ViGTT   73 (128)
T d1vm6a3          52 -------------EALPKTVDLCKKYRAGLVLGTT   73 (128)
T ss_dssp             -------------GGHHHHHHHHHHHTCEEEECCC
T ss_pred             -------------HHHHHHHHHHHhcCCCEEEEcC
Confidence                         2467889999999998765444

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.83  E-value=3.8e-05  Score=54.48  Aligned_cols=105  Identities=12%  Similarity=0.105  Sum_probs=68.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhhcC--CCceEEEecccCCcccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKWIG--HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~~~--~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      |||.|+|+ |.+|..++..|+.+|. .++.+++++......   ++.....  .........|.  ..+.++|+|+.+||
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~--~~l~~adiVVitaG   78 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW--AALADADVVISTLG   78 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG--GGGTTCSEEEECCS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH--HHhccccEEEEecc
Confidence            79999995 9999999999998873 588888875432111   1111111  12233333443  34688999999998


Q ss_pred             CCCCcc--cccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          107 PASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       107 ~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      ......  ...+..+.+..|..-.+.+++.+++.+-
T Consensus        79 ~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p  114 (146)
T d1hyha1          79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF  114 (146)
T ss_dssp             CGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            643211  1233456678899999999999998875

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=1.5e-05  Score=58.17  Aligned_cols=34  Identities=26%  Similarity=0.248  Sum_probs=32.0

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      |||+|+|+ |.+|+.++..|.+.| ++|.++.|...
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G-~~V~~~~r~~~   34 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQG-HEVQGWLRVPQ   34 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCC-CceEEEEcCHH
Confidence            89999997 999999999999999 99999999764

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.82  E-value=5.4e-05  Score=53.50  Aligned_cols=103  Identities=16%  Similarity=0.113  Sum_probs=64.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhc-----CCCceEEE-ecccCCcccCCcCEEEEccC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-----GHPRFELI-RHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~-~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      +||.|+|+ |.+|..++..|..++..++.+++............+.     ........ ..|..  .+.+.|+|+.+||
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~--~~~~advvvitag   78 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA--DTANSDVIVVTSG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG--GGTTCSEEEECCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH--HhcCCCEEEEeee
Confidence            79999996 9999999999998886688888875432211111110     01122222 22332  4578999999998


Q ss_pred             CCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC
Q 022414          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      ...  ....+..+.+..|..-.+.++....+.+-
T Consensus        79 ~~~--~~~~~r~dl~~~N~~i~~~i~~~i~k~~p  110 (142)
T d1uxja1          79 APR--KPGMSREDLIKVNADITRACISQAAPLSP  110 (142)
T ss_dssp             CC-----------CHHHHHHHHHHHHHHHGGGCT
T ss_pred             ccC--CcCcchhHHHhHHHHHHHHHHHHHhccCC
Confidence            543  23445566778899999999999988765

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=6e-05  Score=49.07  Aligned_cols=90  Identities=19%  Similarity=0.169  Sum_probs=60.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      .++|+|+|.|. |-.|.++++.|.+.| .+|++.+.+......   ..+. ..+.+...........++|.+|-.-|...
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g-~~v~~~D~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~d~vi~SPGi~~   76 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARG-VTPRVMDTRMTPPGL---DKLP-EAVERHTGSLNDEWLMAADLIVASPGIAL   76 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTT-CCCEEEESSSSCTTG---GGSC-TTSCEEESBCCHHHHHHCSEEEECTTSCT
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCC-CEEEEeeCCcCchhH---HHHh-hccceeecccchhhhccCCEEEECCCCCC
Confidence            46899999996 889999999999999 999999885432221   1111 23444444443334457899998665432


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEE
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v  143 (297)
                                        ...+++.|++.|+++|
T Consensus        77 ------------------~~~~~~~a~~~gi~ii   92 (93)
T d2jfga1          77 ------------------AHPSLSAAADAGIEIV   92 (93)
T ss_dssp             ------------------TSHHHHHHHHTTCEEE
T ss_pred             ------------------CCHHHHHHHHcCCCeE
Confidence                              1257777888888765

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.80  E-value=3e-05  Score=55.76  Aligned_cols=113  Identities=13%  Similarity=0.086  Sum_probs=73.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCcc---chhhhcC--CCceEEEecccCCcccCCcCEEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKD---NLRKWIG--HPRFELIRHDVTEPLLIEVDQIYH  103 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~---~~~~~~~--~~~~~~~~~Dl~~~~~~~~d~vi~  103 (297)
                      ....||.|+|+ |.+|..++..|...+. .++.+++++......   ++.....  .........|.  ..+.+.|+|+.
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~--~~~~~adivvi   93 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY--NVSANSKLVII   93 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG--GGGTTEEEEEE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch--hhhccccEEEE
Confidence            34578999996 9999999999999984 589998875422111   1211111  11222223333  34578999999


Q ss_pred             ccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCC--eEEEEec
Q 022414          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (297)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~v~~Ss  147 (297)
                      +||...  ....+..+.++.|....+.++..+++.+-  .++.+|-
T Consensus        94 tag~~~--~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          94 TAGARM--VSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             CCSCCC--CTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             eccccc--CCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence            998644  23455566678899999999988888775  4444443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.79  E-value=5.3e-06  Score=62.47  Aligned_cols=35  Identities=29%  Similarity=0.431  Sum_probs=32.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      |||.|+||+|.+|++|++.|.+.| ++|++.+|++.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G-~~V~l~~R~~e   35 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESSHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCC-CEEEEEECCHH
Confidence            899999999999999999999999 99999999653

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.79  E-value=7.5e-05  Score=53.57  Aligned_cols=94  Identities=15%  Similarity=0.211  Sum_probs=56.9

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcC--CCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCc
Q 022414           34 RILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~  111 (297)
                      ||.|.||||++|.++++.|.++.  ..++..+..+..... .    .....-.....+..+....+.|.++.+++..   
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~-~----~~~~~~~~~~~~~~~~~~~~~d~~f~~~~~~---   74 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGK-S----LKFKDQDITIEETTETAFEGVDIALFSAGSS---   74 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTC-E----EEETTEEEEEEECCTTTTTTCSEEEECSCHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccc-c----ccccCCcccccccchhhhhhhhhhhhccCcc---
Confidence            79999999999999999998885  134444432211111 0    0011122333344455667789888876421   


Q ss_pred             ccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEeccee
Q 022414          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (297)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~  150 (297)
                                     ........+.+.++++|=.|+..=
T Consensus        75 ---------------~s~~~~~~~~~~~~~VIDlSsdfR   98 (154)
T d2gz1a1          75 ---------------TSAKYAPYAVKAGVVVVDNTSYFR   98 (154)
T ss_dssp             ---------------HHHHHHHHHHHTTCEEEECSSTTT
T ss_pred             ---------------chhhHHhhhccccceehhcChhhh
Confidence                           234555566678888888887653

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.78  E-value=5.3e-05  Score=54.38  Aligned_cols=113  Identities=16%  Similarity=0.102  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC------CeEEEEecCCCCC-ccchhh---hcCCCceEEEe-cccCCcccCCcCE
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK------NEVIVVDNYFTGS-KDNLRK---WIGHPRFELIR-HDVTEPLLIEVDQ  100 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~------~~v~~~~r~~~~~-~~~~~~---~~~~~~~~~~~-~Dl~~~~~~~~d~  100 (297)
                      .|||.|+||+|.+|++++..|...+.      .++.+++...... .+.+..   .........+. .+-....+.+.|+
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv   82 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV   82 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceE
Confidence            48999999999999999999976532      2445554432111 111111   11112222222 2222345678999


Q ss_pred             EEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHc-CC--eEEEEe
Q 022414          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA--RILLTS  146 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~--r~v~~S  146 (297)
                      ||.++|...  ....+..+.+..|..-.+.+.+.+.+. +-  .++.+|
T Consensus        83 VVitag~~~--~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          83 AILVGSMPR--RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             EEECCSCCC--CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             EEEecccCC--CCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            999998543  344566677899999999999888774 43  444444

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=5.8e-05  Score=54.52  Aligned_cols=99  Identities=16%  Similarity=0.293  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEE-ecCCCCC-ccchhhhcCCCceE-EEecccCCcccCCcCEEEEccCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGS-KDNLRKWIGHPRFE-LIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~-~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ..+||+|.|++|.+|+.+++.+.+....++.+. +|..... .............. .+..| .+.....+|++|...- 
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~-~~~~~~~~DViIDFs~-   80 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSS-LDAVKDDFDVFIDFTR-   80 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESC-STTTTTSCSEEEECSC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeecc-HHHHhcccceEEEecc-
Confidence            358999999999999999999988754666543 3432211 11121221111111 11222 2344567999998652 


Q ss_pred             CCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecc
Q 022414          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (297)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~  148 (297)
                                       -.++...++.|.+.++++|.=+|.
T Consensus        81 -----------------p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          81 -----------------PEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             -----------------HHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             -----------------HHHHHHHHHHHHhccceeEEecCC
Confidence                             225668889999999988765553

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.71  E-value=9.4e-05  Score=54.32  Aligned_cols=35  Identities=23%  Similarity=0.374  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      .|+|+|.|| |++|+.+++.|.++| ++|++++|+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g-~~V~v~dr~~~   36 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSG-IKVTVACRTLE   36 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTT-CEEEEEESCHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEECChH
Confidence            589999996 999999999999999 89999999654

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.59  E-value=2.4e-05  Score=57.30  Aligned_cols=35  Identities=20%  Similarity=0.383  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      |+||.|.||||++|+++++.|.++...++..+..+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            68999999999999999999998865677766543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.58  E-value=2.5e-05  Score=56.44  Aligned_cols=74  Identities=19%  Similarity=0.291  Sum_probs=51.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..+++|+|+|+ |-+|+.+++.|.+.|...+++..|+..+.. .+...+   +......+-......++|+||++.+..
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~-~l~~~~---~~~~~~~~~~~~~l~~~Divi~atss~   95 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV-ELARDL---GGEAVRFDELVDHLARSDVVVSATAAP   95 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHHHHH---TCEECCGGGHHHHHHTCSEEEECCSSS
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHH-HHHHhh---hcccccchhHHHHhccCCEEEEecCCC
Confidence            46899999997 999999999999999557888888633222 222222   334444333334556899999987643

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.54  E-value=4e-05  Score=54.98  Aligned_cols=41  Identities=17%  Similarity=0.267  Sum_probs=36.8

Q ss_pred             cccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        26 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..+++.++||.|.||.|.+|+.+++.|.+.| ++|.+.+|..
T Consensus         3 ~~~~~~~~kI~iIGg~G~mG~~la~~L~~~G-~~V~~~d~~~   43 (152)
T d2pv7a2           3 KTINSDIHKIVIVGGYGKLGGLFARYLRASG-YPISILDRED   43 (152)
T ss_dssp             CCSCTTCCCEEEETTTSHHHHHHHHHHHTTT-CCEEEECTTC
T ss_pred             cccCCCCCeEEEEcCCCHHHHHHHHHHHHcC-CCcEeccccc
Confidence            3466778999999999999999999999999 9999999854

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.51  E-value=0.00033  Score=48.75  Aligned_cols=66  Identities=18%  Similarity=0.222  Sum_probs=48.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~a  105 (297)
                      |+++|.|. |.+|+++++.|.+.| ++|++++.+.    +..... .......+.+|.++..      ..++|.++-+.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g-~~vvvid~d~----~~~~~~-~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMG-HEVLAVDINE----EKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTT-CCCEEEESCH----HHHHHT-TTTCSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCC-CeEEEecCcH----HHHHHH-HHhCCcceeeecccchhhhccCCccccEEEEEc
Confidence            57889985 999999999999999 9999998743    222222 2345677788888763      34688887655

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.40  E-value=0.00014  Score=53.75  Aligned_cols=35  Identities=26%  Similarity=0.505  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      +..||.|.||||++|+++++.|.++...++..+..
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            45789999999999999999999986567766653

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=0.0001  Score=45.72  Aligned_cols=37  Identities=30%  Similarity=0.338  Sum_probs=33.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++++|+|+||+|.+|...++.+...| .+|+++++++
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G-~~Vi~~t~s~   66 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLG-YQVVAVSGRE   66 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCG
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcC-CeEEEEECCH
Confidence            467899999999999999999999999 8999998864

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.35  E-value=0.00022  Score=51.65  Aligned_cols=65  Identities=23%  Similarity=0.308  Sum_probs=43.1

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |||.|.| .|.+|+.+++.|.+.| ++|++.+|+......    ......+.....++  ....++|+||-+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g-~~V~~~d~~~~~~~~----a~~~~~~~~~~~~~--~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRG-HYLIGVSRQQSTCEK----AVERQLVDEAGQDL--SLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCHHHHHH----HHHTTSCSEEESCG--GGGTTCSEEEECS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCC-CEEEEEECCchHHHH----HHHhhccceeeeec--ccccccccccccC
Confidence            7899998 5999999999999999 999999986432221    11111121222222  2456899988754

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.34  E-value=0.0012  Score=45.59  Aligned_cols=76  Identities=14%  Similarity=0.161  Sum_probs=52.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCccc
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFY  113 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~~~  113 (297)
                      ||.|.|++|.+|+.+++.+.+....++.+..-..    +.                +......++|++|....+.     
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~----~~----------------~~~~~~~~~DvvIDFS~p~-----   55 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAG----DP----------------LSLLTDGNTEVVIDFTHPD-----   55 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTT----CC----------------THHHHTTTCSEEEECCCTT-----
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC----Cc----------------hhhhccccCCEEEEcccHH-----
Confidence            7999999999999999998877547776543211    00                0011224689999876332     


Q ss_pred             ccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414          114 KYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus       114 ~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                                   ++...++.|.+.|+++|.=+|
T Consensus        56 -------------~~~~~~~~~~~~~~~~ViGTT   76 (135)
T d1yl7a1          56 -------------VVMGNLEFLIDNGIHAVVGTT   76 (135)
T ss_dssp             -------------THHHHHHHHHHTTCEEEECCC
T ss_pred             -------------HHHHHHHHHHhcCCCEEEecc
Confidence                         466888999999998765333

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.24  E-value=0.00095  Score=48.39  Aligned_cols=69  Identities=13%  Similarity=0.122  Sum_probs=44.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |++|+|.| .|.+|..+++.|.+.|. .+|++.+++....    ........+.....+........+|.|+.+.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~----~~a~~~~~~~~~~~~~~~~~~~~~dlIila~   70 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESI----SKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS   70 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHH----HHHHHTTSCSEEESCGGGGGGTCCSEEEECS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHH----HHHHHhhcchhhhhhhhhhhccccccccccC
Confidence            46799998 69999999999999983 3788888753222    2111112233333344444445789998776

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.24  E-value=8.1e-05  Score=54.43  Aligned_cols=73  Identities=15%  Similarity=0.119  Sum_probs=47.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCC--cccCCcCEEEEccC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE--PLLIEVDQIYHLAC  106 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~d~vi~~a~  106 (297)
                      .++.+|+|+||+|-+|...++.+...| .+|+++++++.+. +...+ +....+ +...|..+  ....++|++|++.|
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G-~~vi~~~~~~~~~-~~~~~-lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKL-ALPLA-LGAEEA-ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGS-HHHHH-TTCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccc-ccccccccccccc-ccccc-ccccee-eehhhhhhhhhccccccccccccc
Confidence            467899999999999999999999999 8999988864322 22222 211111 11111111  13357999999875

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.00034  Score=50.88  Aligned_cols=75  Identities=19%  Similarity=0.287  Sum_probs=50.4

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcC-CCceEEEecccCCcccCCcCEEEEccC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ...++++|+|.|+ |..+++++..|.+.| .+|+++.|+..+..+ +.+.+. ...+..+  +..+....++|+|||+..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g-~~i~I~nRt~~ka~~-l~~~~~~~~~~~~~--~~~~~~~~~~dliIN~Tp   88 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLD-CAVTITNRTVSRAEE-LAKLFAHTGSIQAL--SMDELEGHEFDLIINATS   88 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSHHHHHH-HHHHTGGGSSEEEC--CSGGGTTCCCSEEEECCS
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccc-eEEEeccchHHHHHH-HHHHHhhccccccc--ccccccccccceeecccc
Confidence            3456899999995 888999999999999 789999996543322 222221 1233333  333334467899999864


Q ss_pred             C
Q 022414          107 P  107 (297)
Q Consensus       107 ~  107 (297)
                      .
T Consensus        89 ~   89 (170)
T d1nyta1          89 S   89 (170)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.15  E-value=0.00057  Score=49.69  Aligned_cols=75  Identities=13%  Similarity=0.275  Sum_probs=49.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ...+++|+|.|+ |..+++++..|.+.+ .+|+++.|+..+........-....+.....|  +.....+|++||+...
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~--~~~~~~~diiIN~tp~   89 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMD--SIPLQTYDLVINATSA   89 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG--GCCCSCCSEEEECCCC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhc--cccccccceeeecccc
Confidence            456899999995 778999999999877 89999999753322222222111234444433  3345789999998653

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.05  E-value=0.012  Score=40.24  Aligned_cols=90  Identities=17%  Similarity=0.154  Sum_probs=59.2

Q ss_pred             ccCCCEEEEEcCC---chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           29 FQSNMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        29 ~~~~~~ilItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ....++|.|.|||   +..|..+++.|.+.+..+|+.+..+.    +...      +. -..-++.+.. ..+|.++.+.
T Consensus         5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~----~~i~------G~-~~y~sl~dlp-~~vDlvvi~v   72 (129)
T d2csua1           5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE----EEVQ------GV-KAYKSVKDIP-DEIDLAIIVV   72 (129)
T ss_dssp             TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC----SEET------TE-ECBSSTTSCS-SCCSEEEECS
T ss_pred             hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc----cccC------Ce-EeecchhhcC-CCCceEEEec
Confidence            3456999999999   99999999999776546888876532    1110      11 1223443322 3589888765


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCe-EEEEecc
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTS  148 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-~v~~Ss~  148 (297)
                      .                  -..+..+++.|.+.|++ ++.+|+.
T Consensus        73 p------------------~~~~~~~~~~~~~~g~~~~vi~s~G   98 (129)
T d2csua1          73 P------------------KRFVKDTLIQCGEKGVKGVVIITAG   98 (129)
T ss_dssp             C------------------HHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred             C------------------hHHhHHHHHHHHHcCCCEEEEeccc
Confidence            2                  22466788999999995 6666664

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.0011  Score=50.35  Aligned_cols=72  Identities=14%  Similarity=0.149  Sum_probs=50.7

Q ss_pred             cCCCEEEEEcC----------------CchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCC-
Q 022414           30 QSNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-   92 (297)
Q Consensus        30 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-   92 (297)
                      ..+|+||||+|                ||.+|.+|++++..+| ++|+++.-.......        ..+..+...-.+ 
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~G-a~V~li~g~~~~~~p--------~~~~~~~~~t~~~   74 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG-ANVTLVSGPVSLPTP--------PFVKRVDVMTALE   74 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT-CEEEEEECSCCCCCC--------TTEEEEECCSHHH
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcC-CchhhhhcccccCcc--------cccccceehhhHH
Confidence            45789999886                5999999999999999 999998875432211        234444332221 


Q ss_pred             ------cccCCcCEEEEccCCCCC
Q 022414           93 ------PLLIEVDQIYHLACPASP  110 (297)
Q Consensus        93 ------~~~~~~d~vi~~a~~~~~  110 (297)
                            ....++|++|++|+....
T Consensus        75 m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          75 MEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HHHHHHhhhccceeEeeeechhhh
Confidence                  134579999999997764

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.01  E-value=0.00063  Score=49.65  Aligned_cols=76  Identities=20%  Similarity=0.082  Sum_probs=48.5

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCC----cccCCcCEEEEc
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE----PLLIEVDQIYHL  104 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~d~vi~~  104 (297)
                      ...+.+|||+||+|.+|...++.+...| .+|+++.+++.+ .+...++ ....+....-+..+    ..-.++|+|+++
T Consensus        29 ~~~g~~VLI~gaaGGVG~~aiQlak~~G-a~Viat~~s~~k-~~~~~~l-Ga~~vi~~~~~~~~~~~~~~~~gvD~vid~  105 (176)
T d1xa0a2          29 TPERGPVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAE-HDYLRVL-GAKEVLAREDVMAERIRPLDKQRWAAAVDP  105 (176)
T ss_dssp             CGGGCCEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTC-HHHHHHT-TCSEEEECC---------CCSCCEEEEEEC
T ss_pred             CCCCCEEEEEeccchHHHHHHHHHHHcC-CceEEecCchHH-HHHHHhc-ccceeeecchhHHHHHHHhhccCcCEEEEc
Confidence            3457889999999999999999999999 999998886533 2222222 11111111111111    123479999999


Q ss_pred             cCC
Q 022414          105 ACP  107 (297)
Q Consensus       105 a~~  107 (297)
                      .|.
T Consensus       106 vgg  108 (176)
T d1xa0a2         106 VGG  108 (176)
T ss_dssp             STT
T ss_pred             CCc
Confidence            874

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.96  E-value=0.0011  Score=48.69  Aligned_cols=37  Identities=19%  Similarity=0.164  Sum_probs=33.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++.+|+|+||+|.+|...++.....| .+|++++++.
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~G-a~vi~~~~~~   64 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSD   64 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccC-CEEEEeCCCH
Confidence            358999999999999999999999999 8999999854

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.91  E-value=0.00074  Score=48.02  Aligned_cols=64  Identities=14%  Similarity=0.123  Sum_probs=43.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |||.|.| .|.+|+.+++.|+++| ++|++.++.............   ++    .+.......++|+||.+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~---~~----~~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRG-VEVVTSLEGRSPSTIERARTV---GV----TETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTT-CEEEECCTTCCHHHHHHHHHH---TC----EECCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCC-CeEEEEcCchhHHHHHhhhcc---cc----cccHHHHHhhcCeEEEEe
Confidence            7899998 7999999999999999 999888775433222221111   11    122233456799999876

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.0002  Score=52.42  Aligned_cols=36  Identities=14%  Similarity=0.127  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++.+|+|+||+|.+|...++.+...| .+|+++++++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G-~~vi~~~~~~   63 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTE   63 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCEEEEEeccccccccccccccccC-cccccccccc
Confidence            57899999999999999999999999 8999998753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.90  E-value=0.007  Score=38.31  Aligned_cols=71  Identities=14%  Similarity=0.054  Sum_probs=46.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      .|||.++|-.|-==+.|++.|.++| +.|.+-++......+.    ++..++.+..+ -......+.|.||...+..
T Consensus         1 ~~~ihfiGIgG~GMs~LA~~L~~~G-~~VsGSD~~~~~~t~~----L~~~Gi~i~~g-h~~~~i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           1 HMKIHFVGIGGIGMSAVALHEFSNG-NDVYGSNIEETERTAY----LRKLGIPIFVP-HSADNWYDPDLVIKTPAVR   71 (89)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSSCCHHHHH----HHHTTCCEESS-CCTTSCCCCSEEEECTTCC
T ss_pred             CcEEEEEeECHHHHHHHHHHHHhCC-CeEEEEeCCCChhHHH----HHHCCCeEEee-ecccccCCCCEEEEecCcC
Confidence            4889999854433368999999999 9999998864322222    33345665443 2222345789999877653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.84  E-value=0.008  Score=38.69  Aligned_cols=72  Identities=11%  Similarity=0.026  Sum_probs=48.3

Q ss_pred             ccCCCEEEEEcCCchhH-HHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIG-SHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG-~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      +...++|.+.|-. .+| ++|++.|.++| ++|.+-++......+.+.    ..++.+...+-.+ ...+.|.||...+.
T Consensus         5 ~~~~~~ihfiGig-G~GMs~LA~~L~~~G-~~VsGSD~~~~~~~~~L~----~~Gi~v~~g~~~~-~i~~~d~vV~S~AI   77 (96)
T d1p3da1           5 MRRVQQIHFIGIG-GAGMSGIAEILLNEG-YQISGSDIADGVVTQRLA----QAGAKIYIGHAEE-HIEGASVVVVSSAI   77 (96)
T ss_dssp             CTTCCEEEEETTT-STTHHHHHHHHHHHT-CEEEEEESCCSHHHHHHH----HTTCEEEESCCGG-GGTTCSEEEECTTS
T ss_pred             chhCCEEEEEEEC-HHHHHHHHHHHHhCC-CEEEEEeCCCChhhhHHH----HCCCeEEECCccc-cCCCCCEEEECCCc
Confidence            3456899999954 455 88999999999 999999885322222222    2466665544433 34678998887654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.71  E-value=0.0016  Score=46.25  Aligned_cols=65  Identities=17%  Similarity=0.223  Sum_probs=43.7

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |||.+.|+ |-+|+++++.|++.|.++|.+.+|+.... +.+.+.   .++... .|.  ....++|+||.+.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~-~~l~~~---~~~~~~-~~~--~~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKR-ERLEKE---LGVETS-ATL--PELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHH-HHHHHH---TCCEEE-SSC--CCCCTTSEEEECS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHH-HHhhhh---cccccc-ccc--ccccccceEEEec
Confidence            78999985 99999999999998768999988864322 222221   233332 122  2345689999764

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.68  E-value=0.0012  Score=47.64  Aligned_cols=67  Identities=13%  Similarity=0.232  Sum_probs=45.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ++++|+|+|+ |..+++++..|.+.|..+|.++.|+..+ .+.+...+.   ...+    ......++|+|||+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~k-a~~L~~~~~---~~~~----~~~~~~~~DliINaTp   82 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKT-GQYLAALYG---YAYI----NSLENQQADILVNVTS   82 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHH-HHHHHHHHT---CEEE----SCCTTCCCSEEEECSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHH-HHHHHHhhh---hhhh----hcccccchhhheeccc
Confidence            5789999995 9999999999999995589999886432 222332221   2221    1223356899999764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.67  E-value=0.0027  Score=47.30  Aligned_cols=33  Identities=36%  Similarity=0.464  Sum_probs=30.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |||.|.| .|++|..++..|++.| ++|++++.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g-~~V~g~D~n~   33 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARG-HEVIGVDVSS   33 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCC-CcEEEEeCCH
Confidence            8999997 8999999999999999 9999999753

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.67  E-value=0.0086  Score=43.10  Aligned_cols=84  Identities=11%  Similarity=0.089  Sum_probs=52.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~  111 (297)
                      .+||.|.| +|.+|+.+++.|.+....+++++.........         .......+-......++|+|+.+....   
T Consensus         3 kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---------~~~~~~~~~~~~~~~~~D~Vvi~tp~~---   69 (170)
T d1f06a1           3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---------KTPVFDVADVDKHADDVDVLFLCMGSA---   69 (170)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---------SSCEEEGGGGGGTTTTCSEEEECSCTT---
T ss_pred             cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc---------ccccccchhhhhhccccceEEEeCCCc---
Confidence            57899999 69999999999988754777766654322111         111222222223345799999876432   


Q ss_pred             ccccChhhhHHHhHHHHHHHHHHHHHcCCeEE
Q 022414          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (297)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v  143 (297)
                                     ....++..|-++|+.+|
T Consensus        70 ---------------~h~~~a~~aL~aG~~vv   86 (170)
T d1f06a1          70 ---------------TDIPEQAPKFAQFACTV   86 (170)
T ss_dssp             ---------------THHHHHHHHHTTTSEEE
T ss_pred             ---------------ccHHHHHHHHHCCCcEE
Confidence                           13456666777787655

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.66  E-value=0.0018  Score=45.89  Aligned_cols=70  Identities=16%  Similarity=0.233  Sum_probs=51.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~a  105 (297)
                      -+|+|+|. |-+|+.+++.|.+.| .+|+++...+........... ..++.++.+|.+++.      ..++|.++-+.
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~-~~v~vId~d~~~~~~~~~~~~-~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRG-QNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcC-CCEEEEeccchhHHHHHHHhh-cCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            36999996 899999999999999 899998875432222233222 357899999998873      34688888765

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.63  E-value=0.0017  Score=46.87  Aligned_cols=73  Identities=19%  Similarity=0.193  Sum_probs=48.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-----ccCCcCEEEEc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHL  104 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~d~vi~~  104 (297)
                      +.+.+|||+||+|.+|...++.....| .+|+++.++..+ .+.+.++-. ..+ +..-|....     ...++|+++++
T Consensus        22 ~~~~~VLV~gaaGgVG~~avQlAk~~G-a~Viat~~s~~k-~~~~~~lGa-d~v-i~~~~~~~~~~~~~~~~gvd~vid~   97 (167)
T d1tt7a2          22 PEKGSVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREA-ADYLKQLGA-SEV-ISREDVYDGTLKALSKQQWQGAVDP   97 (167)
T ss_dssp             GGGCCEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSST-HHHHHHHTC-SEE-EEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred             CCCCEEEEeCCcchHHHHHHHHHHHcC-CceEEEecCHHH-HHHHHhhcc-cce-EeccchhchhhhcccCCCceEEEec
Confidence            346679999999999999999999999 899999986433 233333321 222 111222221     22369999998


Q ss_pred             cC
Q 022414          105 AC  106 (297)
Q Consensus       105 a~  106 (297)
                      .|
T Consensus        98 vg   99 (167)
T d1tt7a2          98 VG   99 (167)
T ss_dssp             CC
T ss_pred             Cc
Confidence            86

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.62  E-value=0.0043  Score=41.96  Aligned_cols=37  Identities=24%  Similarity=0.369  Sum_probs=33.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ...++++|.| .|++|-+++..|.+.| .+|+++.+.+.
T Consensus        28 ~~~~~vvIIG-gG~iG~E~A~~l~~~g-~~Vtli~~~~~   64 (121)
T d1d7ya2          28 RPQSRLLIVG-GGVIGLELAATARTAG-VHVSLVETQPR   64 (121)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred             hcCCeEEEEC-cchhHHHHHHHhhccc-ceEEEEeeccc
Confidence            3468999999 6999999999999999 99999999864

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.54  E-value=0.00038  Score=51.00  Aligned_cols=72  Identities=17%  Similarity=0.137  Sum_probs=48.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEe---cccCCc-----ccCCcCEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR---HDVTEP-----LLIEVDQI  101 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~---~Dl~~~-----~~~~~d~v  101 (297)
                      .++.+|+|+||+|.+|...++.+...| .+|++++++..+. +...++ ..  -..+.   .|+.+.     .-.++|++
T Consensus        27 ~~g~~Vlv~ga~g~vG~~~iqlak~~G-a~Vi~~~~s~~k~-~~~~~l-Ga--~~vi~~~~~d~~~~v~~~t~g~g~d~v  101 (179)
T d1qora2          27 KPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKA-QSALKA-GA--WQVINYREEDLVERLKEITGGKKVRVV  101 (179)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHH-HHHHHH-TC--SEEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred             CCCCEEEEEccccccchHHHHHHHHhC-CeEeecccchHHH-HHHHhc-CC--eEEEECCCCCHHHHHHHHhCCCCeEEE
Confidence            357899999999999999999999999 9999998865332 222222 21  12222   122111     12468999


Q ss_pred             EEccC
Q 022414          102 YHLAC  106 (297)
Q Consensus       102 i~~a~  106 (297)
                      +++.+
T Consensus       102 ~d~~g  106 (179)
T d1qora2         102 YDSVG  106 (179)
T ss_dssp             EECSC
T ss_pred             EeCcc
Confidence            99885

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.53  E-value=0.0031  Score=46.04  Aligned_cols=69  Identities=14%  Similarity=0.117  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc----------ccCCcCE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP----------LLIEVDQ  100 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----------~~~~~d~  100 (297)
                      ++.+|||+||+|.+|...++.+...| .+|++++++..+ .+.+.+    .+.+.+ .|..+.          ...++|+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g-~~vi~~~~~~~~-~~~l~~----~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~   97 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAK-REMLSR----LGVEYV-GDSRSVDFADEILELTDGYGVDV   97 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHH-HHHHHT----TCCSEE-EETTCSTHHHHHHHHTTTCCEEE
T ss_pred             CCCEEEEECCCCCcccccchhhcccc-ccceeeeccccc-cccccc----cccccc-ccCCccCHHHHHHHHhCCCCEEE
Confidence            47899999999999999999999999 899988875422 222222    222221 122221          1247999


Q ss_pred             EEEccC
Q 022414          101 IYHLAC  106 (297)
Q Consensus       101 vi~~a~  106 (297)
                      ++++.|
T Consensus        98 v~d~~g  103 (183)
T d1pqwa_          98 VLNSLA  103 (183)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999886

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.0018  Score=46.73  Aligned_cols=73  Identities=15%  Similarity=0.171  Sum_probs=46.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEec---ccCCcccCCcCEEEEccC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH---DVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~---Dl~~~~~~~~d~vi~~a~  106 (297)
                      .++.+|+|.|+ |.+|...++.+...| .++++++++..+. +...+ +...  ..+..   +.......++|++|.+.|
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~G-a~~i~~~~~~~~~-~~a~~-lGad--~~i~~~~~~~~~~~~~~~D~vid~~g  102 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMG-AHVVAFTTSEAKR-EAAKA-LGAD--EVVNSRNADEMAAHLKSFDFILNTVA  102 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESSGGGH-HHHHH-HTCS--EEEETTCHHHHHTTTTCEEEEEECCS
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhccc-ccchhhccchhHH-HHHhc-cCCc--EEEECchhhHHHHhcCCCceeeeeee
Confidence            45799999996 889999999999899 7888888754322 22222 2211  12221   111223457999999987


Q ss_pred             CC
Q 022414          107 PA  108 (297)
Q Consensus       107 ~~  108 (297)
                      ..
T Consensus       103 ~~  104 (168)
T d1uufa2         103 AP  104 (168)
T ss_dssp             SC
T ss_pred             cc
Confidence            43

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.28  E-value=0.0078  Score=42.68  Aligned_cols=98  Identities=13%  Similarity=0.145  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchhHHHHH-HHHHhcCCCeEEEEe-cCCCCCccchhhhcCCCceEEEeccc----CCcccCCcCEEEEc
Q 022414           31 SNMRILVTGGAGFIGSHLV-DKLMENEKNEVIVVD-NYFTGSKDNLRKWIGHPRFELIRHDV----TEPLLIEVDQIYHL  104 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~-~~L~~~g~~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~Dl----~~~~~~~~d~vi~~  104 (297)
                      +.+|+.|.| +|.+|+.+. +.|.+....+++++. |+.........+.   .++......+    .+..+.++|+||.+
T Consensus         3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~---~~i~~~~~~~d~l~~~~~~~~iDiVf~A   78 (157)
T d1nvmb1           3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR---MGVTTTYAGVEGLIKLPEFADIDFVFDA   78 (157)
T ss_dssp             SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH---TTCCEESSHHHHHHHSGGGGGEEEEEEC
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhh---cCCcccccceeeeeecccccccCEEEEc
Confidence            357899999 899998754 555444436777775 3322221112221   2333333211    22345679999986


Q ss_pred             cCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecc
Q 022414          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (297)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~  148 (297)
                      ...                ........+-.+.+.|+.+|=.|+.
T Consensus        79 Tpa----------------g~h~~~~~~~~aa~~G~~VID~s~a  106 (157)
T d1nvmb1          79 TSA----------------SAHVQNEALLRQAKPGIRLIDLTPA  106 (157)
T ss_dssp             SCH----------------HHHHHHHHHHHHHCTTCEEEECSTT
T ss_pred             CCc----------------hhHHHhHHHHHHHHcCCEEEEcccc
Confidence            410                0111222233344678888877774

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.28  E-value=0.0053  Score=44.60  Aligned_cols=38  Identities=29%  Similarity=0.335  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG   69 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   69 (297)
                      .+.+|+|+||+|.+|...++.....| .+|++++++..+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~G-a~Via~~~~~~k   68 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLG-YQVVAVSGREST   68 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCGGG
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcC-CCeEEEecchhH
Confidence            34689999999999999999999999 999999986433

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.26  E-value=0.011  Score=42.62  Aligned_cols=95  Identities=15%  Similarity=0.128  Sum_probs=56.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc----------------cc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP----------------LL   95 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----------------~~   95 (297)
                      .+||.|-| .|.||+.+++.|.++...+++++......  ....-+. ..+......+....                ..
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~--~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPD--FEAYRAK-ELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL   77 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCS--HHHHHHH-HTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCCh--HHHHHhh-hcCceeecccccceeeecccCccccchhhhhh
Confidence            47999999 69999999999998765788777653211  1111111 11222222111100                12


Q ss_pred             CCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecc
Q 022414           96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (297)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~  148 (297)
                      .++|+|+-|.|...                  ...-++.-.+.|++.|++|+.
T Consensus        78 ~~vDvViEcTG~f~------------------~~~~~~~hl~~G~k~Vi~s~~  112 (172)
T d2czca2          78 EKVDIIVDATPGGI------------------GAKNKPLYEKAGVKAIFQGGE  112 (172)
T ss_dssp             TTCSEEEECCSTTH------------------HHHHHHHHHHHTCEEEECTTS
T ss_pred             ccCCEEEECCCCCC------------------CHHHHHHHHHcCCCEEEECCC
Confidence            37999999997542                  223334445678988887764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.24  E-value=0.0057  Score=44.56  Aligned_cols=32  Identities=38%  Similarity=0.481  Sum_probs=29.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      |||.|.| +|..|.+++..|.++| ++|.+..|.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g-~~V~l~~r~   32 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNG-NEVRIWGTE   32 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHC-CEEEEECCG
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEEec
Confidence            8999999 5999999999999999 999999884

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.16  E-value=0.0054  Score=44.78  Aligned_cols=78  Identities=8%  Similarity=-0.017  Sum_probs=50.3

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc--hhh-hcCCCceEEEecccCCc-----ccCCcCE
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN--LRK-WIGHPRFELIRHDVTEP-----LLIEVDQ  100 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~--~~~-~~~~~~~~~~~~Dl~~~-----~~~~~d~  100 (297)
                      ...+++|+|+|+ |..|++++..|.+.|..++++..|+.......  +.+ +...........++.+.     ....+|+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            346799999996 88899999999999967899999865432211  111 11111222334444433     2347899


Q ss_pred             EEEccCC
Q 022414          101 IYHLACP  107 (297)
Q Consensus       101 vi~~a~~  107 (297)
                      |||+...
T Consensus        94 iIN~Tp~  100 (182)
T d1vi2a1          94 LTNGTKV  100 (182)
T ss_dssp             EEECSST
T ss_pred             eccccCC
Confidence            9998753

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.00  E-value=0.00084  Score=49.54  Aligned_cols=33  Identities=21%  Similarity=0.119  Sum_probs=27.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      .+|||+||+|.+|...++.+...|...|+.+++
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~   64 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG   64 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEES
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccc
Confidence            789999999999999999998889445555554

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.99  E-value=0.027  Score=40.21  Aligned_cols=36  Identities=28%  Similarity=0.160  Sum_probs=31.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++.+|+|+| +|.+|...++.+...| .+|++++++.
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~G-a~vi~v~~~~   60 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYG-AFVVCTARSP   60 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhc-ccccccchHH
Confidence            3578999997 6899999999999999 7999998854

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.91  E-value=0.0049  Score=44.06  Aligned_cols=65  Identities=14%  Similarity=0.146  Sum_probs=43.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |++|.+.| .|.+|+.+++.|+++| ++|.+.+|+...... +..   . ..  ...+........+|+++-+.
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g-~~v~~~d~~~~~~~~-~~~---~-~~--~~~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAG-YLLNVFDLVQSAVDG-LVA---A-GA--SAARSARDAVQGADVVISML   65 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSSHHHHHH-HHH---T-TC--EECSSHHHHHTSCSEEEECC
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCC-CeEEEEECchhhhhh-hhh---h-hc--cccchhhhhccccCeeeecc
Confidence            57899998 8999999999999999 999999986433221 111   1 11  11122223445689888876

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.84  E-value=0.022  Score=37.62  Aligned_cols=67  Identities=16%  Similarity=0.170  Sum_probs=47.0

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCccc-------CCcCE
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQ  100 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~d~  100 (297)
                      +.+...||.|+| .|++|+-++....+-| +++++++.+........       .-.++.+|+.|...       .++|+
T Consensus         7 ~~~~~~kigIlG-gGQL~rMla~aA~~lG-~~v~v~d~~~~~PA~~v-------a~~~i~~~~~d~~~l~~~~~~~~~Dv   77 (111)
T d1kjqa2           7 LRPAATRVMLLG-SGELGKEVAIECQRLG-VEVIAVDRYADAPAMHV-------AHRSHVINMLDGDALRRVVELEKPHY   77 (111)
T ss_dssp             TSTTCCEEEEES-CSHHHHHHHHHHHTTT-CEEEEEESSTTCGGGGG-------SSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCCCEEEEEe-CCHHHHHHHHHHHHCC-CEEEEEcCCCCCchhhc-------CCeEEECCCCCHHHHHHHHHhhCCce
Confidence            445568999999 7999999999999999 99999988644322211       22456677776531       14677


Q ss_pred             EEE
Q 022414          101 IYH  103 (297)
Q Consensus       101 vi~  103 (297)
                      |-.
T Consensus        78 iT~   80 (111)
T d1kjqa2          78 IVP   80 (111)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.75  E-value=0.0058  Score=43.58  Aligned_cols=64  Identities=17%  Similarity=0.273  Sum_probs=43.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |||.|.| .|.+|+.+++.|+++| ++|++.+|+....    ..+.. .....  ++-......++|+|+-|.
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G-~~V~~~d~~~~~~----~~~~~-~~~~~--~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAG-YSLVVSDRNPEAI----ADVIA-AGAET--ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSCHHHH----HHHHH-TTCEE--CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCC-CeEEEEeCCcchh----HHHHH-hhhhh--cccHHHHHhCCCeEEEEc
Confidence            7899998 7999999999999999 9999999854322    21111 12221  121222345789999876

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.74  E-value=0.0074  Score=44.42  Aligned_cols=35  Identities=23%  Similarity=0.425  Sum_probs=32.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      -+||.|.|+ |.+|+.++..++..| ++|++.+++..
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G-~~V~l~D~~~~   38 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATG-HTVVLVDQTED   38 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSCHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCC-CcEEEEECChH
Confidence            489999996 999999999999999 99999999754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.70  E-value=0.012  Score=39.39  Aligned_cols=35  Identities=20%  Similarity=0.321  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..++++|.| .|++|-+++..|.+.| .+|+++.|..
T Consensus        21 ~p~~v~IiG-gG~ig~E~A~~l~~~G-~~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIG-GGYIGIELGTAYANFG-TKVTILEGAG   55 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred             cCCeEEEEC-CCccceeeeeeecccc-cEEEEEEecc
Confidence            348999999 5999999999999999 9999998854

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.69  E-value=0.012  Score=42.12  Aligned_cols=37  Identities=24%  Similarity=0.245  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++.+|+|+|++|.+|...++.+...|..+|++++++.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~   63 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE   63 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccch
Confidence            5689999999999999999999988856888888753

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.67  E-value=0.0082  Score=43.26  Aligned_cols=115  Identities=11%  Similarity=0.127  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCchhHHH--HHHHHHhcC---CCeEEEEecCCCCCcc---chhhhc--CCCceEEEecccCCcccCCcCE
Q 022414           31 SNMRILVTGGAGFIGSH--LVDKLMENE---KNEVIVVDNYFTGSKD---NLRKWI--GHPRFELIRHDVTEPLLIEVDQ  100 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~--l~~~L~~~g---~~~v~~~~r~~~~~~~---~~~~~~--~~~~~~~~~~Dl~~~~~~~~d~  100 (297)
                      +.|||.|.|| |.+|..  ++..|+...   ..++++++.+......   ......  .....++...+-.+.++.++|+
T Consensus         1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~   79 (171)
T d1obba1           1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADF   79 (171)
T ss_dssp             CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred             CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCe
Confidence            3699999996 888864  455555432   1589999986432211   111111  1123444443333456789999


Q ss_pred             EEEccCCCCCcccccChh----------------h--------hHHHhHHHHHHHHHHHHHcCC--eEEEEe
Q 022414          101 IYHLACPASPIFYKYNPV----------------K--------TIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (297)
Q Consensus       101 vi~~a~~~~~~~~~~~~~----------------~--------~~~~n~~~~~~l~~~~~~~~~--r~v~~S  146 (297)
                      |++.++.........+..                +        ...-|+...+.+++..++..-  .++.+|
T Consensus        80 Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          80 VINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             EEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            999887543211100000                0        012377778888888887764  444443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.66  E-value=0.0073  Score=43.85  Aligned_cols=34  Identities=21%  Similarity=0.080  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .|||.|+|+ |.+|..++..|.++| ++|.+++|++
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G-~~V~~~~r~~   34 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKG-QSVLAWDIDA   34 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCC-CEEEEEECCH
Confidence            389999996 999999999999999 9999999964

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.64  E-value=0.012  Score=39.78  Aligned_cols=36  Identities=22%  Similarity=0.404  Sum_probs=32.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ...++|+|.| .|++|.+++..|.+.| .+|+++.+..
T Consensus        28 ~~~k~vvViG-gG~iG~E~A~~l~~~g-~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIG-SGYIGIEAAEAFAKAG-KKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred             cCCCEEEEEC-ChHHHHHHHHHhhccc-eEEEEEEecC
Confidence            3468999998 6999999999999999 9999998864

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.62  E-value=0.07  Score=38.50  Aligned_cols=37  Identities=19%  Similarity=0.137  Sum_probs=33.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ..+++|.|.| .|-||+.+++.|..-| .+|++.+|...
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~~g-~~v~~~d~~~~   76 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAALG-AQVRGFSRTPK   76 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHTT-CEEEEECSSCC
T ss_pred             ccCceEEEec-cccccccceeeeeccc-ccccccccccc
Confidence            4589999999 7999999999999999 99999998754

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.58  E-value=0.055  Score=37.18  Aligned_cols=88  Identities=13%  Similarity=0.121  Sum_probs=58.8

Q ss_pred             ccCCCEEEEEcCC---chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           29 FQSNMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        29 ~~~~~~ilItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ..+.++|+|.|+|   +..|..+++.|.+.| ++|+.+....    ....      +. -+.-++.+.. ..+|.++-+.
T Consensus        16 L~~~ksIAVVGaS~~~~~~g~~v~~~L~~~g-~~v~pVnP~~----~~i~------G~-~~~~sl~dlp-~~iD~v~i~v   82 (139)
T d2d59a1          16 LTRYKKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPKY----EEVL------GR-KCYPSVLDIP-DKIEVVDLFV   82 (139)
T ss_dssp             HHHCCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTTC----SEET------TE-ECBSSGGGCS-SCCSEEEECS
T ss_pred             HhcCCeEEEEeecCCCCCchHHHHHHHHHCC-CEEEEECCcc----cccC------CC-cccccccccC-ccceEEEEEe
Confidence            3457999999999   789999999999999 8988876521    1111      11 1123333322 3588877765


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                      .                  -.....+++.|.+.|++.+++.+
T Consensus        83 p------------------~~~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          83 K------------------PKLTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             C------------------HHHHHHHHHHHHHHTCSEEEECT
T ss_pred             C------------------HHHHHHHHHHHHHhCCCEEEEec
Confidence            2                  23566788888888997666544

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.57  E-value=0.05  Score=41.42  Aligned_cols=36  Identities=19%  Similarity=0.291  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .+.+|+|.| .|.+|++++..|...|--++++++...
T Consensus        29 ~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          29 KDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            468999999 688999999999999977888888654

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.018  Score=49.33  Aligned_cols=104  Identities=9%  Similarity=0.142  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc----------c------------hhhhcCCCceEEEec
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------N------------LRKWIGHPRFELIRH   88 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----------~------------~~~~~~~~~~~~~~~   88 (297)
                      ...+|+|.|+ |.+|.++++.|...|-.++++++...-...+          .            +.++...-+++.+..
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~  102 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE  102 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC
Confidence            3589999996 6799999999999997788888764321110          0            111111113444444


Q ss_pred             ccCC------cccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEecceeec
Q 022414           89 DVTE------PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (297)
Q Consensus        89 Dl~~------~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss~~~~~  152 (297)
                      +..+      .-..++|+|+.+..                 +......+.+.|++.++++|+.++.+.+|
T Consensus       103 ~~~~~~~~~~~~~~~~dvVv~~~~-----------------~~~~~~~l~~~c~~~~ip~i~~~~~G~~G  155 (529)
T d1yova1         103 SPENLLDNDPSFFCRFTVVVATQL-----------------PESTSLRLADVLWNSQIPLLICRTYGLVG  155 (529)
T ss_dssp             CHHHHHHSCGGGGGGCSEEEEESC-----------------CHHHHHHHHHHHHHHTCCEEEEEEETTEE
T ss_pred             CchhhhhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEeccCCEE
Confidence            3322      12346898887642                 23445678899999999999988877665

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.49  E-value=0.0079  Score=43.18  Aligned_cols=73  Identities=19%  Similarity=0.119  Sum_probs=46.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEec-ccC---CcccCCcCEEEEcc
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH-DVT---EPLLIEVDQIYHLA  105 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-Dl~---~~~~~~~d~vi~~a  105 (297)
                      .++.+|+|.|+ |.+|...++.+...| .+|+++++++.+ .+...++ ...  ..+.. +..   .....++|.++.+.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G-~~vi~~~~~~~k-~~~a~~l-Ga~--~~i~~~~~~~~~~~~~~~~d~vi~~~   99 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMG-AETYVISRSSRK-REDAMKM-GAD--HYIATLEEGDWGEKYFDTFDLIVVCA   99 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHT-CEEEEEESSSTT-HHHHHHH-TCS--EEEEGGGTSCHHHHSCSCEEEEEECC
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhcc-ccccccccchhH-HHHhhcc-CCc--EEeeccchHHHHHhhhcccceEEEEe
Confidence            35799999996 999999999888889 899999986542 2222222 211  12221 111   12334689999987


Q ss_pred             CCC
Q 022414          106 CPA  108 (297)
Q Consensus       106 ~~~  108 (297)
                      +..
T Consensus       100 ~~~  102 (168)
T d1piwa2         100 SSL  102 (168)
T ss_dssp             SCS
T ss_pred             cCC
Confidence            643

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.48  E-value=0.016  Score=38.88  Aligned_cols=37  Identities=27%  Similarity=0.250  Sum_probs=32.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ...++++|.| .|+||-+++..|.+.| .+|+++.+...
T Consensus        20 ~~p~~i~IiG-~G~ig~E~A~~l~~~G-~~Vtiv~~~~~   56 (119)
T d3lada2          20 NVPGKLGVIG-AGVIGLELGSVWARLG-AEVTVLEAMDK   56 (119)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred             cCCCeEEEEC-CChHHHHHHHHHHHcC-CceEEEEeecc
Confidence            3459999999 6999999999999999 99999998754

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.44  E-value=0.023  Score=41.18  Aligned_cols=36  Identities=19%  Similarity=0.207  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++.+|+|+|+ |.+|...++.+...|..+|+++++++
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~   63 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP   63 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccc
Confidence            5799999996 89999999999999944799998854

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.43  E-value=0.015  Score=39.15  Aligned_cols=35  Identities=23%  Similarity=0.264  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..++++|.| .|++|-+++..|.+.| .+|+++.+.+
T Consensus        22 ~p~~~vIiG-~G~ig~E~A~~l~~lG-~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIG-GGIIGLEMGSVYSRLG-SKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             CCCeEEEEC-CCchHHHHHHHHHhhC-cceeEEEecc
Confidence            348999999 6999999999999999 9999998864

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.43  E-value=0.0054  Score=45.05  Aligned_cols=36  Identities=25%  Similarity=0.163  Sum_probs=31.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +.|+||.|.| +|..|.+++..|.++| ++|.+..|+.
T Consensus         5 ~~m~KI~ViG-aG~wGtAlA~~La~~g-~~V~l~~r~~   40 (189)
T d1n1ea2           5 LYLNKAVVFG-SGAFGTALAMVLSKKC-REVCVWHMNE   40 (189)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHHTTE-EEEEEECSCH
T ss_pred             ceeceEEEEC-CCHHHHHHHHHHHHcC-CeEEEEEecH
Confidence            3457899999 6999999999999999 9999999864

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.055  Score=38.56  Aligned_cols=36  Identities=25%  Similarity=0.228  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++.+|+|.|+ |.+|...++.+...|..+|+++++++
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~   61 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSA   61 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCH
Confidence            4678999986 99999999999999945899988753

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.26  E-value=0.035  Score=40.04  Aligned_cols=34  Identities=21%  Similarity=0.409  Sum_probs=28.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      |-||.|-| .|.||+.+++.|.+++..+|+++...
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            45899998 89999999999999876788887654

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.22  E-value=0.044  Score=39.17  Aligned_cols=34  Identities=21%  Similarity=0.396  Sum_probs=28.5

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      |++|.|-| -|.||+.+++.|.+++..+|+++...
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~   34 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKT   34 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEES
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecC
Confidence            57899998 89999999999988876777777653

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.20  E-value=0.0094  Score=43.19  Aligned_cols=34  Identities=26%  Similarity=0.468  Sum_probs=31.2

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      |||.|.| .|.+|..+++.|+++| ++|.+.+|+..
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G-~~V~~~dr~~~   35 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKG-FKVAVFNRTYS   35 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCC-CeEEEEECCHH
Confidence            7899998 8999999999999999 99999998643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.18  E-value=0.0062  Score=44.22  Aligned_cols=75  Identities=16%  Similarity=0.146  Sum_probs=44.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccc---hhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      .++++|+|+| +|..+++++..|.+.  .+|.+..|+..+..+.   +...........+..+-.+......|++||+..
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~~--~~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp   92 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAKD--NNIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP   92 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTSS--SEEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHccc--cceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCc
Confidence            4689999999 577899999998655  4899999864332221   111111111112222222334467899999864


Q ss_pred             C
Q 022414          107 P  107 (297)
Q Consensus       107 ~  107 (297)
                      .
T Consensus        93 ~   93 (177)
T d1nvta1          93 I   93 (177)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.17  E-value=0.0098  Score=43.59  Aligned_cols=41  Identities=12%  Similarity=0.032  Sum_probs=32.8

Q ss_pred             CCCEEEE-EcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCcc
Q 022414           31 SNMRILV-TGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD   72 (297)
Q Consensus        31 ~~~~ilI-tGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~   72 (297)
                      ++.+++| +||+|.+|...++.....| .+|+++.|+.....+
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~G-a~vI~~v~~~~~~~~   69 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLN-FNSISVIRDRPNLDE   69 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHT-CEEEEEECCCTTHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcC-CeEEEEEecccccch
Confidence            3566666 5999999999999999999 899999886554433

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.13  E-value=0.018  Score=38.49  Aligned_cols=35  Identities=14%  Similarity=0.267  Sum_probs=31.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      .++|+|.| .|++|-+++..|.+.| .+|+++.|...
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g-~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLG-IDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTT-CEEEEECSSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhcc-ccceeeehhcc
Confidence            58999999 5999999999999999 99999998653

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.12  E-value=0.0096  Score=43.55  Aligned_cols=35  Identities=14%  Similarity=0.210  Sum_probs=31.7

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      -+||.|.|+ |.+|+.++..++..| ++|++.+++..
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G-~~V~l~D~~~~   38 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKG-TPILMKDINEH   38 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTT-CCEEEECSSHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCC-CeEEEEECCHH
Confidence            378999996 999999999999999 99999999753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.11  E-value=0.02  Score=39.24  Aligned_cols=37  Identities=22%  Similarity=0.442  Sum_probs=32.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ...++|+|.| +|++|-+++..|.+.| .+|+++.+.+.
T Consensus        33 ~~~k~v~VIG-gG~iG~E~A~~l~~~g-~~Vtvie~~~~   69 (133)
T d1q1ra2          33 IADNRLVVIG-GGYIGLEVAATAIKAN-MHVTLLDTAAR   69 (133)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred             ccCCEEEEEC-CchHHHHHHHHHHhhC-cceeeeeeccc
Confidence            3468999999 6999999999999999 99999998653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.09  E-value=0.022  Score=37.95  Aligned_cols=35  Identities=23%  Similarity=0.311  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..++++|.| .|++|-+++..|.+.| .+|+++.|.+
T Consensus        20 ~p~~vvIiG-gG~ig~E~A~~l~~~G-~~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVG-AGYIGVELGGVINGLG-AKTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             CCCEEEEEC-CChhhHHHHHHhhccc-cEEEEEeecc
Confidence            348999999 6999999999999999 9999999864

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.05  E-value=0.021  Score=37.97  Aligned_cols=35  Identities=26%  Similarity=0.315  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      .++++|.| .|++|-+++..|.+.| .+|+++.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g-~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLG-AQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHT-CEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcc-cceEEEeeecc
Confidence            48899999 6999999999999999 99999988643

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.99  E-value=0.15  Score=33.63  Aligned_cols=82  Identities=21%  Similarity=0.253  Sum_probs=53.7

Q ss_pred             CEEEEEcCC---chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCC
Q 022414           33 MRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (297)
Q Consensus        33 ~~ilItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~  109 (297)
                      |+|.|.|+|   +..|..+++.|++.| ++|+.+....    +...      +.. ...++.+.. ..+|.++.+..   
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g-~~V~pVnP~~----~~i~------G~~-~y~sl~~lp-~~~D~vvi~vp---   65 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVNPNY----DEIE------GLK-CYRSVRELP-KDVDVIVFVVP---   65 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTTC----SEET------TEE-CBSSGGGSC-TTCCEEEECSC---
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCC-CEEEEEcccc----cccc------Ccc-ccccchhcc-ccceEEEEEeC---
Confidence            789999998   779999999999999 8988875421    1111      111 122333322 25788886642   


Q ss_pred             CcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEE
Q 022414          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT  145 (297)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~  145 (297)
                                     -.....+++.|.+.|++.+++
T Consensus        66 ---------------~~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          66 ---------------PKVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             ---------------HHHHHHHHHHHHHTTCCEEEE
T ss_pred             ---------------HHHHHHHHHHHHhcCCceEEe
Confidence                           224567777888899976554

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.96  E-value=0.084  Score=37.76  Aligned_cols=73  Identities=15%  Similarity=-0.027  Sum_probs=46.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc---------ccCCcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP---------LLIEVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---------~~~~~d~  100 (297)
                      .++.+|+|.|+ |.+|...++.+...|..+|++++++..+.  ++.+.+.  ....+...-.|.         ...+.|+
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl--~~a~~lG--a~~~i~~~~~d~~~~~~~~~~~~~G~d~  100 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF--PKAIELG--ATECLNPKDYDKPIYEVICEKTNGGVDY  100 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH--HHHHHTT--CSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHH--HHHHHcC--CcEEEcCCCchhHHHHHHHHhcCCCCcE
Confidence            45789999995 99999999999999956888888754222  1222222  122222211111         1237999


Q ss_pred             EEEccCC
Q 022414          101 IYHLACP  107 (297)
Q Consensus       101 vi~~a~~  107 (297)
                      +|.+.|.
T Consensus       101 vid~~g~  107 (174)
T d1p0fa2         101 AVECAGR  107 (174)
T ss_dssp             EEECSCC
T ss_pred             EEEcCCC
Confidence            9998863

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.93  E-value=0.013  Score=41.15  Aligned_cols=37  Identities=30%  Similarity=0.396  Sum_probs=32.4

Q ss_pred             cccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        28 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      +...+|+|+|+|| |.+|..-++.|++.| .+|++++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~G-A~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTG-CKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGT-CEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEeCC
Confidence            3467899999996 999999999999999 999998653

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.027  Score=38.04  Aligned_cols=35  Identities=17%  Similarity=0.205  Sum_probs=31.8

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      .++++|.| .|++|-+++..|.+.| .+|+++.|...
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G-~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALG-SKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCC-cEEEEEeeccc
Confidence            48999999 5999999999999999 99999999753

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.87  E-value=0.02  Score=38.49  Aligned_cols=35  Identities=26%  Similarity=0.413  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..++++|.| .|++|-+++..|.+.| .+|+++.|.+
T Consensus        31 ~~~~vvIiG-gG~iG~E~A~~l~~~g-~~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIG-GGFIGLELAGNLAEAG-YHVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEE-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             cCCcEEEEC-CcHHHHHHHHHhhccc-ceEEEEeccc
Confidence            358999999 6999999999999999 9999998864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.82  E-value=0.022  Score=38.36  Aligned_cols=34  Identities=21%  Similarity=0.187  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ..++++|.| .|+||-+++..|.+.| .+|+++.|+
T Consensus        19 ~P~~vvIIG-gG~iG~E~A~~l~~lG-~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVG-ASYVALECAGFLAGIG-LDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEEC-CSHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred             CCCeEEEEC-CCccHHHHHHHHhhcC-CeEEEEEec
Confidence            347899999 5999999999999999 899998875

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.82  E-value=0.11  Score=42.82  Aligned_cols=36  Identities=25%  Similarity=0.394  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ...||||.|+ |.+|.++++.|...|..++++++...
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            4689999997 66999999999999966888888764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.78  E-value=0.015  Score=40.89  Aligned_cols=65  Identities=20%  Similarity=0.311  Sum_probs=42.8

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |||.+.| +|-+|+++++.|.+.+ +++++..|+..... .+.+.+   ++... .|. +....++|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~-~~i~v~~r~~~~~~-~l~~~~---g~~~~-~~~-~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTP-HELIISGSSLERSK-EIAEQL---ALPYA-MSH-QDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSS-CEEEEECSSHHHHH-HHHHHH---TCCBC-SSH-HHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCC-CeEEEEcChHHhHH-hhcccc---ceeee-chh-hhhhhccceeeeec
Confidence            7899998 8999999999999999 99999888643222 222221   12111 111 12245789888765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=94.72  E-value=0.091  Score=37.52  Aligned_cols=37  Identities=19%  Similarity=0.091  Sum_probs=30.8

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++.+|+|.|+ |.+|...+..+...|...|++++++.
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~   63 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK   63 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcH
Confidence            35789999999 55899999999999867888888754

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.72  E-value=0.0063  Score=44.00  Aligned_cols=73  Identities=14%  Similarity=0.114  Sum_probs=43.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-------ccCCcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-------LLIEVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------~~~~~d~vi  102 (297)
                      .++.+|+|.|+ |.+|...++.+...|...|++.++++ .+.+...+ +.  ..+++..+-.+.       ...++|++|
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~-~k~~~a~~-~G--a~~~i~~~~~~~~~~i~~~t~gg~D~vi  101 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVE-SRLELAKQ-LG--ATHVINSKTQDPVAAIKEITDGGVNFAL  101 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCH-HHHHHHHH-HT--CSEEEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHH-HHHHHHHH-cC--CeEEEeCCCcCHHHHHHHHcCCCCcEEE
Confidence            35789999997 99999999999888944555555532 11122222 21  122333222111       112699999


Q ss_pred             EccCC
Q 022414          103 HLACP  107 (297)
Q Consensus       103 ~~a~~  107 (297)
                      .+.|.
T Consensus       102 d~~G~  106 (174)
T d1f8fa2         102 ESTGS  106 (174)
T ss_dssp             ECSCC
T ss_pred             EcCCc
Confidence            99863

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.62  E-value=0.011  Score=41.46  Aligned_cols=35  Identities=26%  Similarity=0.370  Sum_probs=29.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNY   66 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~   66 (297)
                      +|+|.|+|+||-||...++-+.+.. .++|.+++-.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            5899999999999999999987763 2788887654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=94.56  E-value=0.036  Score=39.80  Aligned_cols=72  Identities=14%  Similarity=0.080  Sum_probs=45.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc--------ccCCcCEEE
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP--------LLIEVDQIY  102 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--------~~~~~d~vi  102 (297)
                      ++.+|+|.|+ |.+|...++.+...|..+|++++++..+. + ..+.+.  ....++.+-.+.        ...++|++|
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~-~-~a~~lG--a~~~i~~~~~~~~~~v~~~t~g~G~D~vi  101 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICV-E-AAKFYG--ATDILNYKNGHIEDQVMKLTNGKGVDRVI  101 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHH-H-HHHHHT--CSEEECGGGSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhH-H-HHHhhC--ccccccccchhHHHHHHHHhhccCcceEE
Confidence            5788999986 99999999999988955788888754221 1 112221  112222211111        124699999


Q ss_pred             EccCC
Q 022414          103 HLACP  107 (297)
Q Consensus       103 ~~a~~  107 (297)
                      .++|.
T Consensus       102 d~~g~  106 (174)
T d1jqba2         102 MAGGG  106 (174)
T ss_dssp             ECSSC
T ss_pred             EccCC
Confidence            99974

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.54  E-value=0.027  Score=42.87  Aligned_cols=36  Identities=25%  Similarity=0.342  Sum_probs=32.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ...+||+|.| .|..|...+..|.++| ++|+++.|..
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~G-~~V~vier~~   39 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARKG-YSVHILARDL   39 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESSC
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHCC-CCEEEEeCCC
Confidence            3458999999 5999999999999999 9999999853

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.42  E-value=0.037  Score=36.97  Aligned_cols=36  Identities=6%  Similarity=-0.001  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ++++++|.| +|++|-+++..|.+.| .+|+++.|.+.
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g-~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATG-RRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSCT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcc-hhheEeeccch
Confidence            368999999 6999999999999999 99999998753

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=94.29  E-value=0.12  Score=36.93  Aligned_cols=73  Identities=15%  Similarity=0.041  Sum_probs=46.4

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc---------ccCCcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP---------LLIEVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---------~~~~~d~  100 (297)
                      .++.+|+|+| .|.+|...++.+...|...|++.+++..+  .++.+.+.  .-..+...-.+.         ...++|+
T Consensus        27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r--~~~a~~~G--a~~~i~~~~~~~~~~~~~~~~~~~G~d~  101 (174)
T d1e3ia2          27 TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEK--FPKAKALG--ATDCLNPRELDKPVQDVITELTAGGVDY  101 (174)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGG--HHHHHHTT--CSEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHH--HHHHHHhC--CCcccCCccchhhhhhhHhhhhcCCCcE
Confidence            3578999998 59999999999999995577777775432  12222222  112222222121         2247999


Q ss_pred             EEEccCC
Q 022414          101 IYHLACP  107 (297)
Q Consensus       101 vi~~a~~  107 (297)
                      +|.+.|.
T Consensus       102 vie~~G~  108 (174)
T d1e3ia2         102 SLDCAGT  108 (174)
T ss_dssp             EEESSCC
T ss_pred             EEEeccc
Confidence            9999873

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.28  E-value=0.031  Score=37.59  Aligned_cols=36  Identities=28%  Similarity=0.326  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ..++++|.| .|++|-+++..|.+.| .+|+++.|...
T Consensus        24 ~p~~~viiG-~G~iglE~A~~~~~~G-~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIG-AGYIGLEMGSVWGRIG-SEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESC-CSHHHHHHHHHHHHHT-CEEEEECSSSS
T ss_pred             cCCeEEEEc-cchHHHHHHHHHHhcC-CeEEEEEEccc
Confidence            458999999 6999999999999999 99999998754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.26  E-value=0.041  Score=37.12  Aligned_cols=38  Identities=18%  Similarity=0.194  Sum_probs=33.1

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ....++++|.| .|+||-+++..|.+.| .+|+++.+...
T Consensus        23 ~~~p~~vvIiG-gG~IG~E~A~~~~~~G-~~Vtive~~~~   60 (125)
T d1ojta2          23 KEVPGKLLIIG-GGIIGLEMGTVYSTLG-SRLDVVEMMDG   60 (125)
T ss_dssp             CCCCSEEEEES-CSHHHHHHHHHHHHHT-CEEEEECSSSS
T ss_pred             cccCCeEEEEC-CCHHHHHHHHHhhcCC-CEEEEEEeecc
Confidence            33468999999 6999999999999999 99999988753

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.23  E-value=0.058  Score=35.15  Aligned_cols=37  Identities=19%  Similarity=0.123  Sum_probs=29.2

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ...+|+|+|.| +|.-|..++.+|.+.. .+++...|..
T Consensus        29 ~f~gK~VlVVG-~g~Sa~dia~~l~~~a-k~v~~~~~r~   65 (107)
T d2gv8a2          29 LFVGESVLVVG-GASSANDLVRHLTPVA-KHPIYQSLLG   65 (107)
T ss_dssp             GGTTCCEEEEC-SSHHHHHHHHHHTTTS-CSSEEEECTT
T ss_pred             hcCCCeEEEEC-CCCCHHHHHHHHHHhc-CEEEEEEecC
Confidence            34689999999 6899999999999887 5555555543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.18  E-value=0.019  Score=40.59  Aligned_cols=71  Identities=14%  Similarity=0.135  Sum_probs=48.5

Q ss_pred             cccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        26 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ......+|++.|.| .|.+|+.+++.|...| .+|++....+.   ..++...  .++....   .+..+...|+++-+.
T Consensus        18 t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G-~~V~v~e~dp~---~al~A~~--dG~~v~~---~~~a~~~adivvtaT   87 (163)
T d1li4a1          18 TDVMIAGKVAVVAG-YGDVGKGCAQALRGFG-ARVIITEIDPI---NALQAAM--EGYEVTT---MDEACQEGNIFVTTT   87 (163)
T ss_dssp             HCCCCTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCHH---HHHHHHH--TTCEECC---HHHHTTTCSEEEECS
T ss_pred             hCceecCCEEEEec-cccccHHHHHHHHhCC-CeeEeeecccc---hhHHhhc--CceEeee---hhhhhhhccEEEecC
Confidence            34566799999999 8999999999999999 99999888532   2233222  1233322   223445677777766


Q ss_pred             C
Q 022414          106 C  106 (297)
Q Consensus       106 ~  106 (297)
                      |
T Consensus        88 G   88 (163)
T d1li4a1          88 G   88 (163)
T ss_dssp             S
T ss_pred             C
Confidence            5

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.13  E-value=0.025  Score=39.48  Aligned_cols=35  Identities=20%  Similarity=0.283  Sum_probs=29.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcC-CCeEEEEecC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNY   66 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g-~~~v~~~~r~   66 (297)
                      ||+|.|+|+||-||...+.-+.+.. .++|.+++-.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            5789999999999999999888763 3788887653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.12  E-value=0.042  Score=38.86  Aligned_cols=39  Identities=13%  Similarity=0.253  Sum_probs=33.7

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      .....+|+|+|.|-+..+|+.++..|.++| ..|+.....
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~g-atVt~~h~~   70 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAG-CTTTVTHRF   70 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTT-CEEEEECSS
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhh-ccccccccc
Confidence            344679999999999999999999999999 888877653

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.09  E-value=0.088  Score=37.87  Aligned_cols=35  Identities=20%  Similarity=0.224  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..++|+|.| +|..|-+-+..|.++| ++|+++.+..
T Consensus        42 ~~k~V~IIG-aGPAGL~AA~~la~~G-~~Vtl~E~~~   76 (179)
T d1ps9a3          42 QKKNLAVVG-AGPAGLAFAINAAARG-HQVTLFDAHS   76 (179)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEEESSS
T ss_pred             CCcEEEEEC-ccHHHHHHHHHHHhhc-cceEEEeccC
Confidence            459999999 6999999999999999 9999999864

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.03  E-value=0.054  Score=38.63  Aligned_cols=108  Identities=10%  Similarity=-0.002  Sum_probs=57.4

Q ss_pred             CEEEEEcC-CchhHHHHHHHHHhcCC---CeEEEEecCCCCCcc-chh----hhcC--CCceEEEecccCCcccCCcCEE
Q 022414           33 MRILVTGG-AGFIGSHLVDKLMENEK---NEVIVVDNYFTGSKD-NLR----KWIG--HPRFELIRHDVTEPLLIEVDQI  101 (297)
Q Consensus        33 ~~ilItGa-tG~iG~~l~~~L~~~g~---~~v~~~~r~~~~~~~-~~~----~~~~--~~~~~~~~~Dl~~~~~~~~d~v  101 (297)
                      |||.|.|| +.+.+..++..+.....   .++.+++.+...... .+.    ....  ..........-...++.+.|+|
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvV   81 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV   81 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEE
Confidence            79999997 44555666666655431   388888875432111 111    0111  1123332222222356799999


Q ss_pred             EEccCCCCCcccccCh------------------hhhHHHhHHHHHHHHHHHHHcCC
Q 022414          102 YHLACPASPIFYKYNP------------------VKTIKTNVIGTLNMLGLAKRVGA  140 (297)
Q Consensus       102 i~~a~~~~~~~~~~~~------------------~~~~~~n~~~~~~l~~~~~~~~~  140 (297)
                      ++.++.........+.                  ......|+...+.+++..++..-
T Consensus        82 v~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~p  138 (169)
T d1s6ya1          82 TTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCP  138 (169)
T ss_dssp             EECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             EEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCC
Confidence            9999865421111000                  01123567777788888877764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.94  E-value=0.1  Score=38.11  Aligned_cols=36  Identities=22%  Similarity=0.294  Sum_probs=31.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..+++|.|.| .|.||+.+++.|..-| .+|++.++..
T Consensus        41 l~gk~vgIiG-~G~IG~~va~~l~~fg-~~V~~~d~~~   76 (197)
T d1j4aa1          41 VRDQVVGVVG-TGHIGQVFMQIMEGFG-AKVITYDIFR   76 (197)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSC
T ss_pred             ccCCeEEEec-ccccchhHHHhHhhhc-ccccccCccc
Confidence            3479999999 8999999999999999 9999988754

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.86  E-value=0.038  Score=33.67  Aligned_cols=34  Identities=21%  Similarity=0.042  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +|+|.|.| +|++|+-++..-.+-| .++++++...
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG-~~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLG-IAVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGT-EEEEEECTTS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcC-CEEEEEcCCC
Confidence            47899999 7999999999999999 9999988653

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.69  E-value=0.044  Score=43.48  Aligned_cols=34  Identities=32%  Similarity=0.557  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +|||+|.| +|.-|...|..|.+.| ++|.++.+..
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G-~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKG-HQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEEESSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCC-CCEEEEECCC
Confidence            68999999 6999999999999999 9999998864

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=93.67  E-value=0.086  Score=37.53  Aligned_cols=73  Identities=14%  Similarity=0.045  Sum_probs=44.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-------ccCCcCEEE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-------LLIEVDQIY  102 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------~~~~~d~vi  102 (297)
                      .++.+|+|.|+ |.+|...++.+...|...|++.++++. +.+...+. .  ....+..+-.+.       ...++|++|
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~-k~~~~~~~-g--a~~~i~~~~~~~~~~~~~~~~~g~d~vi  105 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEE-KLKLAERL-G--ADHVVDARRDPVKQVMELTRGRGVNVAM  105 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHH-HHHHHHHT-T--CSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhH-HHHHHhhc-c--cceeecCcccHHHHHHHhhCCCCceEEE
Confidence            45788999985 999999999998888556676766432 11222221 1  122332211110       224699999


Q ss_pred             EccCC
Q 022414          103 HLACP  107 (297)
Q Consensus       103 ~~a~~  107 (297)
                      .++|.
T Consensus       106 d~~g~  110 (172)
T d1h2ba2         106 DFVGS  110 (172)
T ss_dssp             ESSCC
T ss_pred             EecCc
Confidence            99863

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=93.62  E-value=0.23  Score=33.72  Aligned_cols=90  Identities=16%  Similarity=0.104  Sum_probs=55.5

Q ss_pred             ccCCCEEEEEcCC---chhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           29 FQSNMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        29 ~~~~~~ilItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      ....++|.|.|||   +-.|..+++.|.+.| +.+..+.-+...  +...      + .....++.+.. ..+|.++-+.
T Consensus        10 L~~pksIAVVGaS~~~~k~g~~v~~~L~~~g-~~~~~v~~~~~~--~~i~------g-~~~~~~l~~i~-~~iD~v~v~~   78 (136)
T d1iuka_          10 LSQAKTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVNPRFQG--EELF------G-EEAVASLLDLK-EPVDILDVFR   78 (136)
T ss_dssp             HHHCCEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEECGGGTT--SEET------T-EECBSSGGGCC-SCCSEEEECS
T ss_pred             HhCCCeEEEEeecCCCCCchHHHHHHHhcCC-CCceEEEecccc--ceee------c-eecccchhhcc-CCCceEEEec
Confidence            3456899999999   679999999999999 888776542211  1110      1 11122333222 3578888765


Q ss_pred             CCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                      .                  -.....+++.|.+.|++.+++.+
T Consensus        79 p------------------~~~v~~~v~~~~~~g~k~i~~q~  102 (136)
T d1iuka_          79 P------------------PSALMDHLPEVLALRPGLVWLQS  102 (136)
T ss_dssp             C------------------HHHHTTTHHHHHHHCCSCEEECT
T ss_pred             c------------------HHHHHHHHHHHHhhCCCeEEEec
Confidence            2                  22345667777788887665544

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.61  E-value=0.093  Score=36.63  Aligned_cols=36  Identities=22%  Similarity=0.388  Sum_probs=30.1

Q ss_pred             CCCEEEEEc-CCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTG-GAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItG-atG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++.++|.+ +.||+|.++++.|.+.| .+|+++.+..
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G-~~Vtlv~~~~   74 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAG-HEVTIVSGVH   74 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTT-CEEEEEESSC
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcC-CeEEEEecCC
Confidence            467777763 56999999999999999 9999999853

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=93.54  E-value=0.039  Score=39.68  Aligned_cols=35  Identities=14%  Similarity=0.264  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ..+|.+.| .|.+|..+++.|+++| ++|++.+|+..
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G-~~V~v~dr~~~   36 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHG-FVVCAFNRTVS   36 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSTH
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCC-CeEEEEcCCHH
Confidence            35799999 6999999999999999 99999999653

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.37  E-value=0.19  Score=36.37  Aligned_cols=38  Identities=18%  Similarity=0.165  Sum_probs=32.7

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ...++++.|.| .|.||+.+++.|..-| .+|...++...
T Consensus        44 ~l~g~tvgIiG-~G~IG~~va~~l~~fg-~~v~~~d~~~~   81 (191)
T d1gdha1          44 KLDNKTLGIYG-FGSIGQALAKRAQGFD-MDIDYFDTHRA   81 (191)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEECSSCC
T ss_pred             eecccceEEee-cccchHHHHHHHHhhc-ccccccccccc
Confidence            34589999999 7999999999999999 99998887543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=93.30  E-value=0.043  Score=39.28  Aligned_cols=73  Identities=19%  Similarity=0.060  Sum_probs=43.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccC-Cc--------ccCCcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-EP--------LLIEVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~--------~~~~~d~  100 (297)
                      .++.+|+|.|+ |.+|...++.+...|...|++++++. .+.+. .+.+..  -..+..+-. +.        ...++|+
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~-~k~~~-ak~lGa--~~~i~~~~~~~~~~~~~~~~~~~g~D~  101 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINK-DKFAR-AKEFGA--TECINPQDFSKPIQEVLIEMTDGGVDY  101 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG-GGHHH-HHHHTC--SEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccH-HHHHH-HHHhCC--cEEEeCCchhhHHHHHHHHHcCCCCcE
Confidence            35789999998 56899999999999945666666543 22222 222221  112222111 11        1247999


Q ss_pred             EEEccCC
Q 022414          101 IYHLACP  107 (297)
Q Consensus       101 vi~~a~~  107 (297)
                      +|.+.|.
T Consensus       102 vid~~G~  108 (176)
T d2fzwa2         102 SFECIGN  108 (176)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999863

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.22  E-value=0.17  Score=36.72  Aligned_cols=37  Identities=16%  Similarity=0.246  Sum_probs=32.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ..++++.|.| .|-||+.+++.|..-| .+|.+.++...
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~fg-~~v~~~d~~~~   83 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAFG-FNVLFYDPYLS   83 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEECTTSC
T ss_pred             eeCceEEEec-cccccccceeeeeccc-cceeeccCccc
Confidence            4589999998 8999999999999999 99999888644

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.16  E-value=0.13  Score=37.65  Aligned_cols=37  Identities=24%  Similarity=0.299  Sum_probs=32.7

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ..+++|.|.| .|-||+.+++.|..-| .+|++.++...
T Consensus        43 l~~ktvgIiG-~G~IG~~va~~l~~fg-~~v~~~d~~~~   79 (199)
T d1dxya1          43 LGQQTVGVMG-TGHIGQVAIKLFKGFG-AKVIAYDPYPM   79 (199)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSCC
T ss_pred             ccceeeeeee-cccccccccccccccc-eeeeccCCccc
Confidence            3479999999 8999999999999999 99999988654

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.11  E-value=0.052  Score=39.67  Aligned_cols=32  Identities=41%  Similarity=0.563  Sum_probs=27.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |||.|.| .||+|..++..| ++| ++|++++-+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g-~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQ-NEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTT-SEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCC-CcEEEEECCH
Confidence            8999997 899999998755 678 9999998764

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.04  E-value=0.34  Score=34.21  Aligned_cols=40  Identities=18%  Similarity=0.205  Sum_probs=35.0

Q ss_pred             ccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        27 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .....+++|.|.|-+.-+|+.++..|.++| ..|+......
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~g-atVt~~~~~t   73 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNN-ATVTTCHSKT   73 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTT-CEEEEECTTC
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhcc-CceEEEeccc
Confidence            445679999999999999999999999999 9998877643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.96  E-value=0.078  Score=40.31  Aligned_cols=36  Identities=22%  Similarity=0.166  Sum_probs=32.2

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +..+||+|.| .|..|...+..|.++| ++|+++.|..
T Consensus         2 ~~~~kV~IiG-aG~aGl~~A~~L~~~G-~~v~v~Er~~   37 (265)
T d2voua1           2 PTTDRIAVVG-GSISGLTAALMLRDAG-VDVDVYERSP   37 (265)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             CCCCcEEEEC-cCHHHHHHHHHHHHCC-CCEEEEeCCC
Confidence            3458999999 5999999999999999 9999999864

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.89  E-value=0.14  Score=36.80  Aligned_cols=72  Identities=15%  Similarity=0.071  Sum_probs=40.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-ccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~d~vi~~a  105 (297)
                      +||.|.| .|.+|+..++.|...+..+|+++.-....+.+.+.+....+...-+..|+.+. ...++|+|+.+.
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~t   74 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPL   74 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhccccceeeecc
Confidence            6899999 68999999999987754788876543222222222222211111122233221 235689998754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.75  E-value=0.21  Score=36.12  Aligned_cols=37  Identities=19%  Similarity=0.069  Sum_probs=32.6

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ..+++|.|.| .|.||+.+++.|..-| .+|...++...
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg-~~v~~~d~~~~   78 (188)
T d1sc6a1          42 ARGKKLGIIG-YGHIGTQLGILAESLG-MYVYFYDIENK   78 (188)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSCC
T ss_pred             ccceEEEEee-cccchhhhhhhccccc-ceEeecccccc
Confidence            4579999998 8999999999999999 99999988643

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.65  E-value=0.12  Score=36.65  Aligned_cols=37  Identities=19%  Similarity=0.197  Sum_probs=32.7

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ...+|+++|.|-|.-+|+.++..|+++| ..|+.....
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~g-aTVt~~~~~   62 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDG-ATVYSVDVN   62 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTS-CEEEEECSS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCC-CEEEEeccc
Confidence            5678999999999999999999999999 888776653

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=92.61  E-value=0.25  Score=35.23  Aligned_cols=73  Identities=18%  Similarity=0.140  Sum_probs=46.9

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEe-cccCCc--------ccCCcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR-HDVTEP--------LLIEVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~Dl~~~--------~~~~~d~  100 (297)
                      .++.+|+|+|+ |.+|...++.+...|..+|++++++..+.+  +.+.+..  ...+. -|..+.        ...++|+
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~--~Ak~~GA--~~~in~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFE--KAMAVGA--TECISPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH--HHHHHTC--SEEECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHH--HHHhcCC--cEEECccccchHHHHHHHHhccccceE
Confidence            35788999985 999999999999998668999998643321  2222221  11221 121111        2247999


Q ss_pred             EEEccCC
Q 022414          101 IYHLACP  107 (297)
Q Consensus       101 vi~~a~~  107 (297)
                      +|.+.|.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9999863

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.55  E-value=0.27  Score=35.43  Aligned_cols=36  Identities=19%  Similarity=0.193  Sum_probs=32.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..++++.|.| .|.||+.+++.|..-| .+|...++..
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg-~~v~~~d~~~   77 (188)
T d2naca1          42 LEAMHVGTVA-AGRIGLAVLRRLAPFD-VHLHYTDRHR   77 (188)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHGGGT-CEEEEECSSC
T ss_pred             ccccceeecc-ccccchhhhhhhhccC-ceEEEEeecc
Confidence            4579999999 8999999999999989 9999999864

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=92.47  E-value=0.37  Score=33.71  Aligned_cols=86  Identities=13%  Similarity=0.119  Sum_probs=48.9

Q ss_pred             CEEEEEcCCchhHHH-HHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCc
Q 022414           33 MRILVTGGAGFIGSH-LVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (297)
Q Consensus        33 ~~ilItGatG~iG~~-l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~  111 (297)
                      +||.|.| +|.+|+. .+..|.+.+..+++++............+...   +.+  .|-.+....++|+|+.+.. ..  
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~---~~~--~~~~~~l~~~~D~V~I~tp-~~--   72 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWR---IPY--ADSLSSLAASCDAVFVHSS-TA--   72 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHT---CCB--CSSHHHHHTTCSEEEECSC-TT--
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccc---ccc--cccchhhhhhccccccccc-ch--
Confidence            6899999 6999975 56777665437887776544333333333221   221  1111112346899887642 11  


Q ss_pred             ccccChhhhHHHhHHHHHHHHHHHHHcCCeE
Q 022414          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARI  142 (297)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~  142 (297)
                                     ....++..+.+.|..+
T Consensus        73 ---------------~h~~~~~~al~~gk~V   88 (164)
T d1tlta1          73 ---------------SHFDVVSTLLNAGVHV   88 (164)
T ss_dssp             ---------------HHHHHHHHHHHTTCEE
T ss_pred             ---------------hcccccccccccccee
Confidence                           3456666677778654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.22  E-value=0.09  Score=37.28  Aligned_cols=35  Identities=17%  Similarity=0.273  Sum_probs=29.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF   67 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~   67 (297)
                      +|||+|.| .|++|-.++..|.+.+. .+|+++.+..
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            68999999 59999999999999873 4788887764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=92.19  E-value=0.081  Score=35.66  Aligned_cols=64  Identities=13%  Similarity=0.059  Sum_probs=44.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcc------cCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~d~vi~~a  105 (297)
                      |+++|+| -|-+|+.+++.|.  + +.|.++...+..    ... ....++.++.+|.++..      ..+++.++-+.
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~-~~i~vi~~d~~~----~~~-~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--G-SEVFVLAEDENV----RKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--G-GGEEEEESCTTH----HHH-HHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--C-CCCEEEEcchHH----HHH-HHhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            5789998 5889999999994  4 567777664322    111 12357889999998763      34688888654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.06  E-value=0.074  Score=41.19  Aligned_cols=33  Identities=21%  Similarity=0.475  Sum_probs=30.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |+|+|.|| |.-|...+..|.++| ++|+++.+..
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G-~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRG-TDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTT-CCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCC-CCEEEEecCC
Confidence            78999995 999999999999999 9999998854

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.76  E-value=0.097  Score=37.79  Aligned_cols=35  Identities=14%  Similarity=0.138  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCC-eEEEEecCCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~   68 (297)
                      ++||+|.| .|..|-..+..|.+.| + +|+++.|...
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G-~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLG-YSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTT-CCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCC-CCeEEEEEecCc
Confidence            58999999 5999999999999999 6 6999888653

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=91.75  E-value=0.17  Score=36.95  Aligned_cols=69  Identities=17%  Similarity=0.239  Sum_probs=45.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      ...+++|+|-| -|-+|+++++.|.+.| .+|++.+.+.    +.+..... .+.+.+  +..+.-..++|+++=||.
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~G-akvvv~d~d~----~~~~~~~~-~g~~~~--~~~~~~~~~~DI~iPcA~   92 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAG-AQLLVADTDT----ERVAHAVA-LGHTAV--ALEDVLSTPCDVFAPCAM   92 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH----HHHHHHHH-TTCEEC--CGGGGGGCCCSEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEecchH----HHHHHHHh-hccccc--Cccccccccceeeecccc
Confidence            35689999998 8999999999999999 9998776532    22211111 122222  222223457999998874

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=91.73  E-value=0.47  Score=33.45  Aligned_cols=73  Identities=16%  Similarity=0.061  Sum_probs=43.3

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc---------ccCCcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP---------LLIEVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---------~~~~~d~  100 (297)
                      .++.+|+|.|+ |.+|...+..+...+...|++++++..+. + ..+.+.  .-+.+..+-.+.         ...++|+
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl-~-~a~~~G--Ad~~in~~~~~~~~~~~~~~~~~~G~d~  101 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF-E-KAKVFG--ATDFVNPNDHSEPISQVLSKMTNGGVDF  101 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-H-HHHHTT--CCEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHH-H-HHHHcC--CcEEEcCCCcchhHHHHHHhhccCCcce
Confidence            35789999996 55777777778788756888888754322 1 112221  122332211111         1236999


Q ss_pred             EEEccCC
Q 022414          101 IYHLACP  107 (297)
Q Consensus       101 vi~~a~~  107 (297)
                      ++.+.|.
T Consensus       102 vid~~G~  108 (175)
T d1cdoa2         102 SLECVGN  108 (175)
T ss_dssp             EEECSCC
T ss_pred             eeeecCC
Confidence            9999874

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.69  E-value=0.13  Score=36.47  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=41.9

Q ss_pred             CCEEEEEcCCchhHH-HHHHHHHhcC-C---CeEEEEecCCCCCc---cchhhhcC--CCceEEEecccCCcccCCcCEE
Q 022414           32 NMRILVTGGAGFIGS-HLVDKLMENE-K---NEVIVVDNYFTGSK---DNLRKWIG--HPRFELIRHDVTEPLLIEVDQI  101 (297)
Q Consensus        32 ~~~ilItGatG~iG~-~l~~~L~~~g-~---~~v~~~~r~~~~~~---~~~~~~~~--~~~~~~~~~Dl~~~~~~~~d~v  101 (297)
                      ..||.|.||. .+|. .++..|+..- .   .++++++.+.....   ..+.....  ..........-...++.+.|+|
T Consensus         3 ~~KI~iIGaG-sv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~V   81 (167)
T d1u8xx1           3 SFSIVIAGGG-STFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV   81 (167)
T ss_dssp             CEEEEEECTT-SSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred             CceEEEECCC-hhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEE
Confidence            4789999984 4554 3555555532 1   38888887643321   11111110  1223333222123456799999


Q ss_pred             EEccCCCC
Q 022414          102 YHLACPAS  109 (297)
Q Consensus       102 i~~a~~~~  109 (297)
                      |+.+|...
T Consensus        82 vitag~~~   89 (167)
T d1u8xx1          82 MAHIRVGK   89 (167)
T ss_dssp             EECCCTTH
T ss_pred             EECCCcCC
Confidence            99998654

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.64  E-value=0.13  Score=37.70  Aligned_cols=31  Identities=16%  Similarity=0.201  Sum_probs=25.9

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      |||++.| ++..|..+++.|++.| ++|.++.-
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g-~~I~~Vvt   31 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAG-YEISAIFT   31 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCC-CCEEEEEc
Confidence            8899997 4568999999999999 88876553

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.61  E-value=0.11  Score=40.21  Aligned_cols=34  Identities=29%  Similarity=0.233  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +|||+|.| +|.-|..-+..|.+.| ++|+++.+..
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G-~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHG-LNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTS-CEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCC-CCEEEEeCCC
Confidence            48999999 6999999999999999 9999998754

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.57  E-value=0.43  Score=35.31  Aligned_cols=72  Identities=7%  Similarity=0.049  Sum_probs=38.1

Q ss_pred             CEEEEEcCCchhHH-HHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEE-EecccCCc-ccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGS-HLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL-IRHDVTEP-LLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~-~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~-~~~~~d~vi~~a  105 (297)
                      -+|.|.| .|.+|+ ++++.+......+|+++........+...+....+.... ...|+.+. ...++|+|+.+.
T Consensus        34 iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~t  108 (221)
T d1h6da1          34 FGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIIL  108 (221)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred             EEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcccccceeeeecc
Confidence            4799999 589996 577777665437888665432222222222221111111 12233221 234689998765

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.50  E-value=0.14  Score=36.13  Aligned_cols=36  Identities=17%  Similarity=0.093  Sum_probs=31.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      .++.+|+|.|+ |.+|...++.+...| .+|+++++++
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G-~~Vi~~~~~~   61 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMG-LHVAAIDIDD   61 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcC-Cccceecchh
Confidence            35789999986 999999999998899 8999998853

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.34  E-value=0.17  Score=37.77  Aligned_cols=71  Identities=14%  Similarity=0.122  Sum_probs=46.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~  107 (297)
                      ...+++|+|-| -|-+|+++++.|.+.| .+|++.+.+.    ..+.......+...+  +..+.-...+|+++=||..
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~G-akvv~~d~~~----~~~~~~~~~~g~~~~--~~~~~~~~~cDIl~PcA~~  106 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEG-AKLVVTDVNK----AAVSAAVAEEGADAV--APNAIYGVTCDIFAPCALG  106 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH----HHHHHHHHHHCCEEC--CGGGTTTCCCSEEEECSCS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEeecccH----HHHHHHHHhcCCccc--CCcccccccccEecccccc
Confidence            45689999999 8999999999999999 9998876532    222222111122222  2222234579999998853

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.04  E-value=0.17  Score=33.39  Aligned_cols=36  Identities=22%  Similarity=0.331  Sum_probs=27.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCC--CeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~   67 (297)
                      ..++++|.|| |++|-+++..|.+.+.  .+|+++.|.+
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            3589999996 9999999977765441  5788888754

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.01  E-value=0.062  Score=38.02  Aligned_cols=75  Identities=27%  Similarity=0.286  Sum_probs=40.6

Q ss_pred             CEEEEEcCCchhHHHHHHH-HHhcC----CCeEEEEecCCCCCccc--hhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           33 MRILVTGGAGFIGSHLVDK-LMENE----KNEVIVVDNYFTGSKDN--LRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~-L~~~g----~~~v~~~~r~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      |||.|.|| |.+|...+-. |+..-    ..++.+++.+..+....  +...............-...++.++|+|+..+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita   79 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF   79 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEec
Confidence            79999998 5466555533 33221    15899998864322211  11111112233222222234567899999999


Q ss_pred             CCC
Q 022414          106 CPA  108 (297)
Q Consensus       106 ~~~  108 (297)
                      +..
T Consensus        80 ~~~   82 (162)
T d1up7a1          80 RPG   82 (162)
T ss_dssp             CTT
T ss_pred             ccC
Confidence            754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.88  E-value=0.12  Score=39.61  Aligned_cols=31  Identities=23%  Similarity=0.378  Sum_probs=28.8

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |+|.| .|.+|..++.+|.++| .+|+++.+..
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G-~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKEN-KNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCC-CcEEEEeCCC
Confidence            99999 6999999999999999 9999999854

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.86  E-value=0.15  Score=36.93  Aligned_cols=34  Identities=21%  Similarity=0.296  Sum_probs=28.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF   67 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~   67 (297)
                      |||+|.| .|++|-+++..|.+.+. .+|+++.|..
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            8999999 58999999999988752 5788888754

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.78  E-value=0.22  Score=34.68  Aligned_cols=31  Identities=19%  Similarity=0.354  Sum_probs=25.4

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ||.+.| .|.+|..+++.|++.| +.+ ...|..
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g-~~~-~~~~~~   32 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRF-PTL-VWNRTF   32 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTS-CEE-EECSST
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCC-CEE-EEeCCH
Confidence            688999 6999999999999988 765 456654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=90.71  E-value=0.15  Score=35.69  Aligned_cols=73  Identities=11%  Similarity=0.150  Sum_probs=49.2

Q ss_pred             ccccccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEc
Q 022414           25 FSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHL  104 (297)
Q Consensus        25 ~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~  104 (297)
                      ..+.+..+|+++|.| -|++|+.+++.|...| ..|+++..++-.   .++...  .+++....   +......|++|-+
T Consensus        16 ~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~G-a~V~V~E~DPi~---alqA~m--dGf~v~~~---~~a~~~aDi~vTa   85 (163)
T d1v8ba1          16 ATDFLISGKIVVICG-YGDVGKGCASSMKGLG-ARVYITEIDPIC---AIQAVM--EGFNVVTL---DEIVDKGDFFITC   85 (163)
T ss_dssp             HHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHT-CEEEEECSCHHH---HHHHHT--TTCEECCH---HHHTTTCSEEEEC
T ss_pred             HhCceecCCEEEEec-ccccchhHHHHHHhCC-CEEEEEecCchh---hHHHHh--cCCccCch---hHccccCcEEEEc
Confidence            335667799999999 8999999999999999 999998875422   222222  23333222   2344556777766


Q ss_pred             cCC
Q 022414          105 ACP  107 (297)
Q Consensus       105 a~~  107 (297)
                      .|-
T Consensus        86 TGn   88 (163)
T d1v8ba1          86 TGN   88 (163)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            653

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.58  E-value=0.22  Score=37.13  Aligned_cols=37  Identities=30%  Similarity=0.332  Sum_probs=32.9

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ....++|+|.| .|..|...+..|.+.| ++|+++.+..
T Consensus        46 ~~~~k~VvIIG-aGpAGl~aA~~l~~~G-~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVG-AGPSGSEAARVLMESG-YTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             ccCCceEEEEc-ccHHHHHHHHHHHHhc-cceeeEeecc
Confidence            34579999999 6999999999999999 9999998765

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.49  E-value=0.18  Score=39.48  Aligned_cols=35  Identities=20%  Similarity=0.299  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..++|+|+| +|..|-..+..|.++| ++|+++.+..
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G-~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAG-HQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHT-CEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCC-CCEEEEeCCC
Confidence            358999999 6999999999999999 9999998754

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.33  E-value=0.2  Score=39.72  Aligned_cols=38  Identities=18%  Similarity=0.272  Sum_probs=32.0

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCC-CeEEEEecCCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFT   68 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~   68 (297)
                      +.+|+|+|+| +|.-|...+..|++++. ++|+++.|...
T Consensus         2 ~~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           2 PTIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CSCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            4578999999 59999999999998763 58999998753

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.29  E-value=0.49  Score=34.21  Aligned_cols=73  Identities=21%  Similarity=0.054  Sum_probs=45.1

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEec----ccCCc-----ccCCcCE
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH----DVTEP-----LLIEVDQ  100 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~----Dl~~~-----~~~~~d~  100 (297)
                      .++.+|+|.|+ |.+|...++.+...|..+|+++++++.+.  ++.+.   .+.+.+.-    |+.+.     ...++|+
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl--~~a~~---~Ga~~~~~~~~~~~~~~i~~~t~g~g~D~   97 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL--AHAKA---QGFEIADLSLDTPLHEQIAALLGEPEVDC   97 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH--HHHHH---TTCEEEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhh--Hhhhh---ccccEEEeCCCcCHHHHHHHHhCCCCcEE
Confidence            35789999985 99998888888888856888887743211  11111   23333321    11110     2347999


Q ss_pred             EEEccCCC
Q 022414          101 IYHLACPA  108 (297)
Q Consensus       101 vi~~a~~~  108 (297)
                      +|.+.|..
T Consensus        98 vid~vG~~  105 (195)
T d1kola2          98 AVDAVGFE  105 (195)
T ss_dssp             EEECCCTT
T ss_pred             EEECcccc
Confidence            99998743

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=90.25  E-value=0.27  Score=34.52  Aligned_cols=87  Identities=15%  Similarity=0.123  Sum_probs=47.1

Q ss_pred             CEEEEEcCCchhHHH-HHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCCCCc
Q 022414           33 MRILVTGGAGFIGSH-LVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (297)
Q Consensus        33 ~~ilItGatG~iG~~-l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~~~~  111 (297)
                      |||.|.| .|.+|+. .+..|.+.+..++.+.+++.. ..+.+.+.+.   +.....|..+....++|+|+.+...    
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~-~~~~~~~~~~---~~~~~~~~~~ll~~~iD~V~I~tp~----   72 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPK-VLGTLATRYR---VSATCTDYRDVLQYGVDAVMIHAAT----   72 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHH-HHHHHHHHTT---CCCCCSSTTGGGGGCCSEEEECSCG----
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHH-HHHHHHHhcc---cccccccHHHhcccccceecccccc----
Confidence            7899999 5778865 566776665367765555321 1222222222   2112233333222468998876421    


Q ss_pred             ccccChhhhHHHhHHHHHHHHHHHHHcCCeE
Q 022414          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARI  142 (297)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~  142 (297)
                                    .....++..|-+.|..+
T Consensus        73 --------------~~H~~~~~~al~~gk~V   89 (167)
T d1xeaa1          73 --------------DVHSTLAAFFLHLGIPT   89 (167)
T ss_dssp             --------------GGHHHHHHHHHHTTCCE
T ss_pred             --------------ccccccccccccccccc
Confidence                          12446666677778754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=90.08  E-value=0.092  Score=37.10  Aligned_cols=75  Identities=17%  Similarity=0.262  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecc--cCCcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD--VTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D--l~~~~~~~~d~vi~~a~~~  108 (297)
                      +.-+++|+| .|-.|..-++.+..-| ..|.+++.+..... .++..+. ..++....+  .......++|+||.++-..
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lG-A~V~~~D~~~~~l~-~l~~~~~-~~~~~~~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLG-AQVQIFDINVERLS-YLETLFG-SRVELLYSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHHHG-GGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCC-CEEEEEeCcHHHHH-HHHHhhc-ccceeehhhhhhHHHhhccCcEEEEeeecC
Confidence            358899999 5999999999999999 99999998543222 2222222 233333221  2233456899999988644


Q ss_pred             C
Q 022414          109 S  109 (297)
Q Consensus       109 ~  109 (297)
                      .
T Consensus       107 G  107 (168)
T d1pjca1         107 G  107 (168)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=90.00  E-value=0.71  Score=30.66  Aligned_cols=92  Identities=14%  Similarity=0.015  Sum_probs=54.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-ccCCcCEEEEccCCCCCc
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLACPASPI  111 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~d~vi~~a~~~~~~  111 (297)
                      -+|+|.| +|.+|+++++++..+..++++++.........   ...  .++.+...|-... .....+.++.+..     
T Consensus         4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G---~~I--~Gi~V~~~~~l~~~~~~~i~iai~~i~-----   72 (126)
T d2dt5a2           4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVG---RPV--RGGVIEHVDLLPQRVPGRIEIALLTVP-----   72 (126)
T ss_dssp             EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTT---CEE--TTEEEEEGGGHHHHSTTTCCEEEECSC-----
T ss_pred             ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcC---CEE--CCEEEecHHHHHHHHhhcccEEEEeCC-----
Confidence            4799999 69999999998754433788887664332211   111  2455554443222 2234565555431     


Q ss_pred             ccccChhhhHHHhHHHHHHHHHHHHHcCCe-EEEEecc
Q 022414          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTS  148 (297)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-~v~~Ss~  148 (297)
                                   ....+.+++.|.+.|++ +.-++..
T Consensus        73 -------------~~~~~~I~d~l~~~gIk~I~~f~~~   97 (126)
T d2dt5a2          73 -------------REAAQKAADLLVAAGIKGILNFAPV   97 (126)
T ss_dssp             -------------HHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             -------------HHHHHHHHHHHHHcCCCEEeecCce
Confidence                         12346788899999985 5555443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.86  E-value=0.69  Score=33.04  Aligned_cols=36  Identities=22%  Similarity=0.296  Sum_probs=31.5

Q ss_pred             cCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        30 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ..++++.|.| .|.||+.+++.|..-| .+|++.++..
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~fg-~~v~~~d~~~   77 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAFG-AYVVAYDPYV   77 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEECTTS
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhcc-ceEEeecCCC
Confidence            4578999999 7999999999999989 8999988754

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.29  E-value=0.16  Score=39.60  Aligned_cols=34  Identities=18%  Similarity=0.418  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |..|+|.| +|.-|..+++.|.+.| ++|.++.++.
T Consensus         1 M~dv~IIG-aG~sGl~~A~~L~~~g-~~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIVG-SGLFGAVCANELKKLN-KKVLVIEKRN   34 (298)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHGGGT-CCEEEECSSS
T ss_pred             CccEEEEC-CcHHHHHHHHHHHhCC-CcEEEEECCC
Confidence            35699999 6999999999999999 9999998854

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=89.27  E-value=0.4  Score=31.34  Aligned_cols=36  Identities=17%  Similarity=0.170  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhc---CCCeEEEEecCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMEN---EKNEVIVVDNYFT   68 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~---g~~~v~~~~r~~~   68 (297)
                      ..++++|.| .|++|-+++..|.+.   | .+|+++.|.+.
T Consensus        17 ~p~~v~IiG-gG~ig~E~A~~l~~~~~~g-~~Vtli~~~~~   55 (117)
T d1feca2          17 APKRALCVG-GGYISIEFAGIFNAYKARG-GQVDLAYRGDM   55 (117)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHHSCTT-CEEEEEESSSS
T ss_pred             cCCeEEEEC-CChHHHHHHHHhHhhcccc-cccceeccccc
Confidence            358999999 599999999876554   6 78999988654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.05  E-value=0.24  Score=35.17  Aligned_cols=33  Identities=18%  Similarity=0.139  Sum_probs=27.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      +++|+|.| .|++|-+++..|.+.| .++.++.+.
T Consensus         3 ~~~VvIIG-gG~~G~e~A~~l~~~g-~~v~v~~~~   35 (185)
T d1q1ra1           3 NDNVVIVG-TGLAGVEVAFGLRASG-WEGNIRLVG   35 (185)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTT-CCSEEEEEC
T ss_pred             CCCEEEEC-CcHHHHHHHHHHHHcC-CceEEEEec
Confidence            57899999 6999999999999998 665555443

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.33  E-value=0.24  Score=36.77  Aligned_cols=31  Identities=23%  Similarity=0.335  Sum_probs=28.8

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |+|+| +|.-|...+..|.++| ++|.++.+..
T Consensus         8 viViG-aG~~Gl~~A~~La~~G-~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDG-KKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCC-CCEEEEcCCC
Confidence            79999 7999999999999999 9999999864

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.76  E-value=0.045  Score=41.14  Aligned_cols=26  Identities=38%  Similarity=0.516  Sum_probs=23.5

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEV   60 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v   60 (297)
                      |||+|.| .|.+|...+..|+++| ++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G-~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERY-HSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHH-TTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCC-CCc
Confidence            7999999 5999999999999999 654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=87.38  E-value=1  Score=31.90  Aligned_cols=89  Identities=17%  Similarity=0.147  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCchhHHH-HHHHHHhcCC-CeEEEEecCCCCCccchhhhcCCCceEEEecccCCc-ccCCcCEEEEccCCC
Q 022414           32 NMRILVTGGAGFIGSH-LVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLACPA  108 (297)
Q Consensus        32 ~~~ilItGatG~iG~~-l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~d~vi~~a~~~  108 (297)
                      .+||.|.| +|.+|+. .++.|.+.+. .+++++........+.+.+...   ...+..|+.+. ...++|+|+.+... 
T Consensus         3 kirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~---~~~~~~~~~ell~~~~id~v~I~tp~-   77 (181)
T d1zh8a1           3 KIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVG---NPAVFDSYEELLESGLVDAVDLTLPV-   77 (181)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHS---SCEEESCHHHHHHSSCCSEEEECCCG-
T ss_pred             CcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccc---ccceeeeeeccccccccceeeccccc-
Confidence            46899999 6999986 4677766432 5777665433222222222222   22223333221 23468998876421 


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeE
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI  142 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~  142 (297)
                                       .....++..|.+.|..+
T Consensus        78 -----------------~~h~~~~~~al~~gk~V   94 (181)
T d1zh8a1          78 -----------------ELNLPFIEKALRKGVHV   94 (181)
T ss_dssp             -----------------GGHHHHHHHHHHTTCEE
T ss_pred             -----------------cccccccccccccchhh
Confidence                             12346667777778654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.02  E-value=0.32  Score=37.71  Aligned_cols=33  Identities=36%  Similarity=0.642  Sum_probs=28.6

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +|+|.| .|.+|..++..|.++|..+|+++.|..
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            599999 599999999999999933699998864

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.90  E-value=0.52  Score=35.63  Aligned_cols=35  Identities=23%  Similarity=0.311  Sum_probs=30.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ++|+|.| .|..|..++..|.+.|.+.|.++.|...
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            7899999 5999999999999999448888888654

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.85  E-value=0.52  Score=34.35  Aligned_cols=31  Identities=29%  Similarity=0.417  Sum_probs=26.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEec
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r   65 (297)
                      |||++.| ++..|..+++.|+++| ++|.++..
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~-~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEG-HEVVGVFT   31 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTT-CEEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCC-CcEEEEEc
Confidence            8899998 6788999999999999 88876553

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.53  E-value=0.39  Score=36.63  Aligned_cols=31  Identities=26%  Similarity=0.427  Sum_probs=28.3

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      |+|.| .|..|..++.+|.++| .+|+++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G-~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQG-VKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCC-CcEEEEeCCC
Confidence            88999 6999999999999999 9999999853

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.35  E-value=0.55  Score=36.65  Aligned_cols=35  Identities=14%  Similarity=0.258  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +..||+|+| +|.-|-.-+..|.++| ++|+++-+..
T Consensus         4 ~~~kViVIG-aG~aGL~aA~~L~~~G-~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIG-SGVSGLAAARQLQSFG-MDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEEC-CBHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhCC-CCEEEEeCCC
Confidence            347899999 6999999999999999 8999987753

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.23  E-value=0.54  Score=32.75  Aligned_cols=35  Identities=20%  Similarity=0.076  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ++.+|+|.|+ |-+|...++.+...| .+|++++++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g-~~v~~~~~~~   61 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMG-LNVVAVDIGD   61 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCC-CeEeccCCCH
Confidence            5789999975 889999999999999 7898888753

>d1m3sa_ c.80.1.3 (A:) Hypothetical protein YckF {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: SIS domain
superfamily: SIS domain
family: mono-SIS domain
domain: Hypothetical protein YckF
species: Bacillus subtilis [TaxId: 1423]

Probab=85.89  E-value=1.9  Score=30.56  Aligned_cols=77  Identities=17%  Similarity=0.227  Sum_probs=49.7

Q ss_pred             CCCEEEEEc--CCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTG--GAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItG--atG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..++|+++|  .++.++..+...|..-| ..+..+.                        |+.......-|++|-.....
T Consensus        36 ~a~~I~i~G~G~S~~~a~~~~~~l~~lg-~~~~~~~------------------------d~~~~~~~~~Dl~I~iS~sG   90 (186)
T d1m3sa_          36 SSHQIFTAGAGRSGLMAKSFAMRLMHMG-FNAHIVG------------------------EILTPPLAEGDLVIIGSGSG   90 (186)
T ss_dssp             HCSCEEEECSHHHHHHHHHHHHHHHHTT-CCEEETT------------------------STTCCCCCTTCEEEEECSSS
T ss_pred             cCCeEEEEECcHHHHHHHHHHHHHHhcc-CCCCcCC------------------------hhhcccCCCCCEEEEecCcc
Confidence            458899998  46778888888888888 6554321                        11111223446666544322


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                      .               ......+++.|++.|+++|.+++
T Consensus        91 ~---------------t~~~i~~~~~ak~~g~~iI~IT~  114 (186)
T d1m3sa_          91 E---------------TKSLIHTAAKAKSLHGIVAALTI  114 (186)
T ss_dssp             C---------------CHHHHHHHHHHHHTTCEEEEEES
T ss_pred             c---------------hhhhHHHHHHHHHCCCCEEEEec
Confidence            1               22466888999999999888765

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.82  E-value=0.64  Score=31.34  Aligned_cols=36  Identities=31%  Similarity=0.290  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCchhHHHHHHHHHh----cCCCeEEEEecCCC
Q 022414           31 SNMRILVTGGAGFIGSHLVDKLME----NEKNEVIVVDNYFT   68 (297)
Q Consensus        31 ~~~~ilItGatG~iG~~l~~~L~~----~g~~~v~~~~r~~~   68 (297)
                      ..++++|.| .|++|-+++..|.+    .| .+|+++.+.+.
T Consensus        36 ~~k~i~IvG-gG~~G~E~A~~l~~~~~~~g-~~Vt~i~~~~~   75 (137)
T d1m6ia2          36 EVKSITIIG-GGFLGSELACALGRKARALG-TEVIQLFPEKG   75 (137)
T ss_dssp             HCSEEEEEC-CSHHHHHHHHHHHHHHHHHT-CEEEEECSSSS
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHHHHHhcC-CEEEEeccccc
Confidence            468999998 59999999998853    47 89999888653

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.34  E-value=0.37  Score=36.99  Aligned_cols=32  Identities=16%  Similarity=0.249  Sum_probs=29.1

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +|+|.|| |-.|..++..|.+.| .+|.++.|.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G-~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAG-IDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHT-CCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCC-CCEEEEeCCC
Confidence            6999995 899999999999999 8999998864

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.27  E-value=0.55  Score=32.56  Aligned_cols=31  Identities=29%  Similarity=0.424  Sum_probs=26.2

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      ||+|.| .|++|-+++..|. ++ .+|+++.+..
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~-~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QT-YEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TT-SEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cC-CCEEEEeccc
Confidence            799999 5999999999985 46 7899998754

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=85.08  E-value=0.5  Score=36.04  Aligned_cols=44  Identities=11%  Similarity=0.163  Sum_probs=35.1

Q ss_pred             cccccccCCCEEEEEcCCchhHHH-----HHHHHHhcCCCeEEEEecCCC
Q 022414           24 RFSKFFQSNMRILVTGGAGFIGSH-----LVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        24 ~~~~~~~~~~~ilItGatG~iG~~-----l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      ....+..++++|+|+.|-|.+|+.     |+..|.+.| ++|.+++-+..
T Consensus        11 ~~~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G-~rVllvD~Dp~   59 (279)
T d1ihua2          11 LVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMG-FDVHLTTSDPA   59 (279)
T ss_dssp             HHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTT-CCEEEEESCCC
T ss_pred             HHHHhhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC-CcEEEEeCCCC
Confidence            334556778999999999999965     467888899 99999998754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=84.97  E-value=0.66  Score=34.80  Aligned_cols=36  Identities=19%  Similarity=0.201  Sum_probs=31.8

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ...+++|+|-| -|-+|+++++.|.+.| .+|++++..
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~G-akvv~vsD~   63 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMG-AKVIAVSDI   63 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcC-CeEEEeecc
Confidence            45689999998 8999999999999999 999887754

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=84.87  E-value=0.81  Score=28.34  Aligned_cols=29  Identities=17%  Similarity=0.150  Sum_probs=24.4

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEE
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV   63 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~   63 (297)
                      |||||.| +|.=-.+|+..|.++. .++++.
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~-~~v~~~   29 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQG-YEVHFY   29 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTT-CEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCC-CeEEEe
Confidence            8999999 5666789999999888 788765

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=84.50  E-value=5.3  Score=28.44  Aligned_cols=90  Identities=18%  Similarity=0.242  Sum_probs=55.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCC--eEEEEecCCCCCccchhhhcCCCceEEEec-ccCC-----------------
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRH-DVTE-----------------   92 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-Dl~~-----------------   92 (297)
                      +||.|.| -|.-|..++..|.+.+..  +.+++.-+    .+.+....  ....+.-+ +++.                 
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD----~~~L~~~~--a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e   73 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTD----LQVLEASN--ADVKIQIGENITRGLGAGGRPEIGEQAALE   73 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESC----HHHHHTCC--CSEEEECCTTTTTTSCCTTCHHHHHHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCC----HHHHhcCC--cceEEecccccCCCcccccCchhhHhHHHH
Confidence            5789999 688999999999998743  33444432    22222111  11112111 1111                 


Q ss_pred             ------cccCCcCEEEEccCCCCCcccccChhhhHHHhHHHHHHHHHHHHHcCCe
Q 022414           93 ------PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR  141 (297)
Q Consensus        93 ------~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r  141 (297)
                            ..+.+.|.||-+||...-            .-.-++..+++.|++.++.
T Consensus        74 ~~~~I~~~l~~~d~vfi~AGlGGg------------TGtgaapviA~~ake~g~l  116 (194)
T d1w5fa1          74 SEEKIREVLQDTHMVFITAGFGGG------------TGTGASPVIAKIAKEMGIL  116 (194)
T ss_dssp             THHHHHHHTTTCSEEEEEEETTSS------------HHHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHhcCCCeEEEEEecCCC------------cccchHHHHHHHHHHcCCc
Confidence                  124479999999998762            2345677889999999984

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.95  E-value=0.84  Score=35.14  Aligned_cols=36  Identities=19%  Similarity=0.194  Sum_probs=31.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ...+++|+|-| .|-+|+++++.|.+.| .+|++++-+
T Consensus        33 ~L~gktvaIqG-fGnVG~~~A~~L~e~G-akvv~vsD~   68 (293)
T d1hwxa1          33 GFGDKTFAVQG-FGNVGLHSMRYLHRFG-AKCVAVGES   68 (293)
T ss_dssp             SSTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEEET
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEEcc
Confidence            35679999999 6999999999999999 999887754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=83.79  E-value=0.62  Score=34.76  Aligned_cols=33  Identities=24%  Similarity=0.484  Sum_probs=28.6

Q ss_pred             EEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        34 ~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +|+|.| +|..|...+..|.++|.++|+++.+..
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            699999 699999999999999944799998864

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=83.40  E-value=0.35  Score=34.35  Aligned_cols=30  Identities=20%  Similarity=0.341  Sum_probs=24.3

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcCCCeEEEEe
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVD   64 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~   64 (297)
                      .+|+|.| +|++|-+++..|.+.| .++.++.
T Consensus         4 a~VvIIG-gG~~G~e~A~~l~~~g-~~v~i~~   33 (183)
T d1d7ya1           4 APVVVLG-AGLASVSFVAELRQAG-YQGLITV   33 (183)
T ss_dssp             SSEEEEC-CSHHHHHHHHHHHHHT-CCSCEEE
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhcC-CceEEEE
Confidence            5599999 7999999999999988 5544433

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=83.08  E-value=2.7  Score=29.41  Aligned_cols=32  Identities=22%  Similarity=0.544  Sum_probs=24.6

Q ss_pred             CEEEEEcCCchhHHHHHHHHHhcC---CCeEEEEec
Q 022414           33 MRILVTGGAGFIGSHLVDKLMENE---KNEVIVVDN   65 (297)
Q Consensus        33 ~~ilItGatG~iG~~l~~~L~~~g---~~~v~~~~r   65 (297)
                      |||.|-| =|.||+.+++.+++++   ..+|+++.-
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd   36 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIND   36 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEEC
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcC
Confidence            6899998 8999999999998753   145555554

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=82.59  E-value=0.62  Score=37.07  Aligned_cols=30  Identities=17%  Similarity=0.221  Sum_probs=28.0

Q ss_pred             EEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        35 ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      |+|.| +|+-|..++..|.+.| ++|.++-+-
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG-~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAG-VQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCc-CeEEEEecC
Confidence            78999 8999999999999999 999999984

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=82.58  E-value=0.68  Score=36.65  Aligned_cols=74  Identities=11%  Similarity=0.107  Sum_probs=52.0

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhc-CCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~  106 (297)
                      .+++.|+| +|..+..-++.+.+. +..+|.+.+|+..........+.+..++++..++-.+....+.|+|+-+.+
T Consensus       128 a~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Ta  202 (340)
T d1x7da_         128 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTA  202 (340)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCC
T ss_pred             CceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccc
Confidence            48899999 788888888877554 557899999865443333333333457788777776777788999887654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=82.07  E-value=0.15  Score=35.40  Aligned_cols=61  Identities=11%  Similarity=0.124  Sum_probs=29.9

Q ss_pred             EEEcCCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEcc
Q 022414           36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (297)
Q Consensus        36 lItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a  105 (297)
                      -+.| +|-+|+++++.|.+.+ +.+.+.+|+..+. +.+.+...   ..  ..+. .......|+||-+.
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~-~~~~v~~R~~~~~-~~l~~~~~---~~--~~~~-~~~~~~~DiVil~v   63 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRY-EIGYILSRSIDRA-RNLAEVYG---GK--AATL-EKHPELNGVVFVIV   63 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC-----CCCEECSSHHHH-HHHHHHTC---CC--CCSS-CCCCC---CEEECS
T ss_pred             EEEe-CcHHHHHHHHHHHhCC-CEEEEEeCChhhh-cchhhccc---cc--ccch-hhhhccCcEEEEec
Confidence            4556 8999999999885543 4445667643222 22333221   11  1122 23456789999776

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=81.84  E-value=0.83  Score=34.51  Aligned_cols=36  Identities=14%  Similarity=0.135  Sum_probs=31.6

Q ss_pred             ccCCCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecC
Q 022414           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (297)
Q Consensus        29 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~   66 (297)
                      ...+++|+|-| .|-+|+++++.|.+.| .+|++++-.
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~G-akvvavsD~   68 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELG-AKAVTLSGP   68 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHT-CEEEEEEET
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcC-CeEEEEecC
Confidence            45689999999 7999999999999999 988887653

>d1jeoa_ c.80.1.3 (A:) Probable 3-hexulose-6-phosphate isomerase MJ1247 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: SIS domain
superfamily: SIS domain
family: mono-SIS domain
domain: Probable 3-hexulose-6-phosphate isomerase MJ1247
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.28  E-value=2.7  Score=29.46  Aligned_cols=77  Identities=19%  Similarity=0.274  Sum_probs=49.3

Q ss_pred             CCCEEEEEc--CCchhHHHHHHHHHhcCCCeEEEEecCCCCCccchhhhcCCCceEEEecccCCcccCCcCEEEEccCCC
Q 022414           31 SNMRILVTG--GAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (297)
Q Consensus        31 ~~~~ilItG--atG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~d~vi~~a~~~  108 (297)
                      ..++|+++|  .+|.++..+...|.+-| ..+......                        ......+=|++|-.....
T Consensus        36 ~a~~I~~~G~G~S~~~a~~~~~~l~~lg-~~~~~~~~~------------------------~~~~~~~~Dl~I~iS~sG   90 (177)
T d1jeoa_          36 KAKKIFIFGVGRSGYIGRCFAMRLMHLG-FKSYFVGET------------------------TTPSYEKDDLLILISGSG   90 (177)
T ss_dssp             HCSSEEEECCHHHHHHHHHHHHHHHHTT-CCEEETTST------------------------TCCCCCTTCEEEEEESSS
T ss_pred             CCCeEEEEEccHHHHHHHHHHHHHHhcC-Ccccccccc------------------------cccccCCCCeEEEecccc
Confidence            467899997  57888999999999988 555432211                        001112335555444322


Q ss_pred             CCcccccChhhhHHHhHHHHHHHHHHHHHcCCeEEEEec
Q 022414          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (297)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~v~~Ss  147 (297)
                      .               ..-...+++.|++.|+++|.+++
T Consensus        91 ~---------------t~~~i~~~~~ak~~g~~vI~IT~  114 (177)
T d1jeoa_          91 R---------------TESVLTVAKKAKNINNNIIAIVC  114 (177)
T ss_dssp             C---------------CHHHHHHHHHHHTTCSCEEEEES
T ss_pred             c---------------hHHHHHHHHHHHHcCCceeEEec
Confidence            1               22456788999999998877765

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=80.90  E-value=0.58  Score=37.91  Aligned_cols=32  Identities=25%  Similarity=0.406  Sum_probs=25.0

Q ss_pred             CEEEEEcC------CchhH---HHHHHHHHhcCCCeEEEEec
Q 022414           33 MRILVTGG------AGFIG---SHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        33 ~~ilItGa------tG~iG---~~l~~~L~~~g~~~v~~~~r   65 (297)
                      |||++++.      +|.+|   .+|+++|.+.| ++|+++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~G-h~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTT-CEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcC-CEEEEEec
Confidence            78888664      46565   67799999999 99988864

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=80.86  E-value=1.6  Score=28.50  Aligned_cols=36  Identities=28%  Similarity=0.351  Sum_probs=30.1

Q ss_pred             CCEEEEEcCC----------chhHHHHHHHHHhcCCCeEEEEecCCC
Q 022414           32 NMRILVTGGA----------GFIGSHLVDKLMENEKNEVIVVDNYFT   68 (297)
Q Consensus        32 ~~~ilItGat----------G~iG~~l~~~L~~~g~~~v~~~~r~~~   68 (297)
                      .++|+|+|+.          -|.+.+.++.|.+.| ++++.+.-++.
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g-~~~IliN~NPe   49 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDG-YETIMVNCNPE   49 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTT-CEEEEECCCTT
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcC-CeEEEEecChh
Confidence            5899999974          368899999999999 88888877543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=80.76  E-value=0.91  Score=35.41  Aligned_cols=32  Identities=25%  Similarity=0.446  Sum_probs=22.8

Q ss_pred             CEEEEEcC-Cc-hh--HHHHHHHHHhcCCCeEEEEec
Q 022414           33 MRILVTGG-AG-FI--GSHLVDKLMENEKNEVIVVDN   65 (297)
Q Consensus        33 ~~ilItGa-tG-~i--G~~l~~~L~~~g~~~v~~~~r   65 (297)
                      |||+|++| || -+  +.+|+++|.++| ++|..++.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G-~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQG-WQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTT-CEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCC-CEEEEEEe
Confidence            67888774 32 22  235889999999 99988764

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.52  E-value=1.9  Score=29.55  Aligned_cols=35  Identities=17%  Similarity=0.091  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCchhHHHHHHHHHhcCCCeEEEEecCC
Q 022414           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (297)
Q Consensus        32 ~~~ilItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   67 (297)
                      +++|+|.| .|..|...+..+++.|...|+++.|..
T Consensus        45 ~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            57899998 699999999999999867788888864