Citrus Sinensis ID: 022451


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
MGEISCSNGISQANGADAKNVALTGYRKSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFADTWGWIMVSIYNPHSHSILSLSYFENLDSSRPNSFTSPINH
ccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEccccccEEEEEEcccccEEEEEcccEEEEcccccHHHHHcHHHHccccccccEEEEEcccccHHHHHHHccccccEEEEEEccHHHHHHHHHccHHHccccccccEEEEEcHHHHHHHHccccccEEEEccccccccccccccccHHHHHHHHHcccccccEEEEccccccccccHHHHHHHHHHHHHHccccEEEEEEccccccccEEEEEEcccccccccccccccccccccccccccccccc
******************KNVALTGYRKSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFADTWGWIMVSIYNPHSHSILSLSYFENLDSSRPNSFTS****
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MGEISCSNGISQANGADAKNVALTGYRKSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFADTWGWIMVSIYNPHSHSILSLSYFENLDSSRPNSFTSPINH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Spermidine synthase Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor.probableB1JK45
Spermidine synthase Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor.probableQ1CLX1
Thermospermine synthase ACAULIS5 Required for correct xylem specification through regulation of the lifetime of the xylem elements. Prevents premature death of the xylem vessel elements.probableQ9S7X6

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.5.-.-Transferring alkyl or aryl groups, other than methyl groups.probable
2.5.1.-5,10-methenyltetrahydromethanopterin hydrogenase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1UIR, chain A
Confidence level:very confident
Coverage over the Query: 28-268
View the alignment between query and template
View the model in PyMOL
Template: 1XJ5, chain A
Confidence level:very confident
Coverage over the Query: 27-295
View the alignment between query and template
View the model in PyMOL